TCONS_00006964 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006964
Unique NameTCONS_00006964
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006964 ID=TCONS_00006964|Name=TCONS_00006964|organism=Clytia hemisphaerica|type=transcript|length=2426bp
CTCCAAATATGGGCCGATCCAAAAGTTATTGGTTGTCACTCGTTGCTCTA
CAATTGATATTAATGGCATTGCCAACTTGGTGCTATAGCTGTTCAAAGGA
GACTGTCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAACAAATATGGTT
GCTCTAAAAAGACTTATGATATCAACCTTGGTACTACAATGGCTGTCAAA
ATGACTTGGTTGACTTTTGATAATATCCCTGGAGATATGCCTTACTGTAG
CGATGGTTATATCAAAGTTTATGCTGGATGTGGACAATATTCATGGGACC
GAACAGAGATCGCAGAATTTTGTTCAGGAAACATGATTTCATCTCTCCCT
CACGACATTTATGCGTATACAAATTGTTTGAGATTGGAATTGAAAAGTCC
TTACAGTTACTCACCGAAAGGGACATTCTCAGTGACTTGGAGTCAATATT
CGTATGGTTTGAGCTCATGCACGACAGGCTTAGATACTAAAACCTCATCA
ACCGGAGTCATGGCAACACCAAACTGGCCATCATCCTCTACATATCCTTC
AACCTGCTCCTGGAAACTTGATCGTTCAGAATCTAACGGATATCTTATTC
ACGTTATGGACATTAAAGACCAAACTTATTCTTCTTATTGTTCCTCTAGC
AAACAACAAATAACGATCAAAGacGAAGACAGTTATTCCTACGGGAAAGA
CATTTGCACCCGGGATAACGGGATTACTAACTATTACAAACCTACTGTCA
AAATTACCTACAAACGCGGGACTGATTGGAATAAGCGAGGCGTTGTCGTT
GGATGGGTTGCTTTCAATAACCCTTATTACACTAACTATGGATCTATCGG
AGGGTATATTGCTGCCGGAATTCTTATTCCTTTGGTCCTTATTTGTATCA
TCGTGTGTGTTTGCTTGAAACAGAAGCGAGGCTATGTGTTCAGCCAAAGA
GCCGCTTTTAATAACATGACACCACAAGGGAACAACATGACTGTCGTCAA
CAACCAAACAGCAACGAATACAACTTCTCTTAATGAGGGAGCGAAGAATT
ATCCCGCCCAACAATATGTTCCACCACCCCAGCAAGGATATCCACCTCAA
CAACCAGCTTACCCACCACCCCAACAAGGTGCTTACCCACCCCAAGGTTA
TGCCCCGCCACCTGGAGCTTATCCTCCACCAGGAGCATATCCACCGCCCA
TGCAAGGATATCCGCCCGTCTCTCAACAAGGATATGCTCAACCACCCTCC
TACCAAGAATCTGTACCAGCTCAACCACCTGCTcaataaaatcgcttaaa
agaTCTAATATTGTCGGTACAGTCTAtagtttttactatttttattacat
ttgtCAGCTAAGGGAACTCCTGCCTGCTCAGCTTCTTTTAGTAGAGAAAG
TTGTTTATATTGTGAACACAGTCTTCCAAGCTTGGAGGGTAAAAATAGTA
CGAAACAATGTTTTTAATTGAAGAAGGGattaaatatatattatatatta
ttattattattttcttatttgaatttttgactttttctcaaaatggcTAC
CGCGTCAAATGCTCCTAATCTAGTACTTCACTGGTTTTAGATTTTGTAGA
AATAGATTTGTAATTatcatgatttttttattttagataattttgcataa
taagagttttattttataagagtGATATAATATTAGATGGTTTACAATAT
TATAGGTTtggtttttaaataagagagatatcgtttgcttactcatcgat
tttaatttacaagctttttcacattggattgacacgaatgtggagcaata
ttggtcagaaagaggtaAAGAAAAACGTtatttgcttatatcagcataac
ataacaataggcagacattgtcctgatatgaaataggtgtctgatatgaa
acgggagcacacttatgtaaaaataaaacctaacataatgatttttaaat
tgcacactttttctataagaacaaagttacaagaacacgaggctgaaaat
attggtaaaaacctaagaatatcgtaagaatatatataagccaaaaaatt
aagaacatcccagcctgagtcaaaatttactggtttttgtaagaaaaagc
gtgtatagcatgaacatataaaatTATAGGGACCAACTGAAACGCACAGA
TACAATTATACATTGTGCTTAcaaataatatattattatgttTTATGTAA
GAAAGACTTTTAAAGAttgtaatgttattataatgaTCCTATACAcgctt
tctttataagaacatccaaaatcctCGAagtctttggatgttcttagttt
ctttgagttttaagcctaagaatGAATGTACTTATACGAGTCcttataaa
aatgttcttaaattttcaccattttctgagtaattttttctgtatttcca
tttaaaaaattagatgtctataaaaa
Run BLAST on NCBI

protein sequence of TCONS_00006964-protein

>TCONS_00006964-protein ID=TCONS_00006964-protein|Name=TCONS_00006964-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
PNMGRSKSYWLSLVALQLILMALPTWCYSCSKETVTGSFGSLSGGNKYGC
SKKTYDINLGTTMAVKMTWLTFDNIPGDMPYCSDGYIKVYAGCGQYSWDR
TEIAEFCSGNMISSLPHDIYAYTNCLRLELKSPYSYSPKGTFSVTWSQYS
YGLSSCTTGLDTKTSSTGVMATPNWPSSSTYPSTCSWKLDRSESNGYLIH
VMDIKDQTYSSYCSSSKQQITIKDEDSYSYGKDICTRDNGITNYYKPTVK
ITYKRGTDWNKRGVVVGWVAFNNPYYTNYGSIGGYIAAGILIPLVLICII
VCVCLKQKRGYVFSQRAAFNNMTPQGNNMTVVNNQTATNTTSLNEGAKNY
PAQQYVPPPQQGYPPQQPAYPPPQQGAYPPQGYAPPPGAYPPPGAYPPPM
QGYPPVSQQGYAQPPSYQESVPAQPPAQ
Run BLAST on NCBI

transcript from alignment at sc0000072:605995..613211-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006964 ID=TCONS_00006964|Name=TCONS_00006964|organism=Clytia hemisphaerica|type=transcript|length=7217bp|location=Sequence derived from alignment at sc0000072:605995..613211- (Clytia hemisphaerica)
CTCCAAATATGGGCCGATCCAAAAGTTATTGGTTGTCACTCGTTGCTCTA CAATTGATATTAATGGCATTGCCAACTTGGTGCTATAGCTGTTCAAAGGA GACTGTCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAACAAATATGGTT GCTCTAAAAAGACTTATGATATCAACCTTGGTACTACAATGGCTGTCAAA ATGACTTGGTTGACTTTTGATAATATCCCTGGAGATATGCCTTACTGTAG CGATGGTTATATCAAAGTTTATGCTGGGTATGTTTTAGTCTTTTGTGAGA GAGGGTGTACGTTTTACGATACACGTTTTTTATGTATTGCGGCCAAAAAT CTATGATGGTGGTGTTTTGAGCATTTTCTTAAATTTTTTGGCCATTTTCA TCATGGGTATTCTTATATAGAGTATATTCTTTTTTTTTAAAGCATATGCT AAAGCTTGACATACAACATCATTTCAGCATTCATTTACATTTTGACATTT GATTCTGTTAAATTAAATGACAAAATCCTTTAAATGGACTTCTGAAGCAT CAAGACTTTTTGCTTTTGAAGGCTTGGGAACAAGAGTAGTTTTTTTCGCA TTTGTGCTATGCAACATGCTCCATCCCACCAACCTGAAACGCTTTATCGT GTCTCCACACCATTTTTCGTTCTACCAATAAAAGTGAAATCTCAATTTTG TCCCTGGGACAAGATCAGCGTGTTTCCCACACTTTTTATCCCATGAAACA AAAAAAGGAAACCATATGGGACACACACTTTTTTTCTTGTGTTGGTTGGA TAGAGCATGTTGCATCGCAACAACGCGAAAAAAAACTTCTCGTGTCTCCA AGCCTTAAGTATTGAAAGTTTTATTTTTAAATAAGAGTGATATCGTTTGC TTACTCGTCAATTCTAATTTACAAGCTTTTTTACATTGAATTGACAATGT TGTGGAGCAAGATTGATCAGAAAGAGGAAAAGAAAAACAATTTTTTGTTT ATTCAGCACAGTATAACAATAGGGAGACACTGTCCTGATATGAAATATGT GTCTGATATGAAACGGCAACAGTTATGTAAAAATAAAACCTTTAAAAAAA ACTTTGTTGTTTCATATTCATGATATTCATGACGTAATGTTTTCTACGGA AATATCCCGGTTTTAGCCAGTAGTGACACTTTTAAACTAGACAAAAGGTA TATAAAAGTGCCACTACTGGCAAAAACCGGGGTCTTTCCGTAGAAAACAT GTCATGAATATCATGAATTCCGTCTCTTTTTTTAGATGTGGACAATATTC ATGGGACCGAACAGAGATCGCAGAATTTTGTTCAGGAAACATGATTTCAT CTCTCCCTCACGACATTTATGCGTATACAAATTGTTTGAGATTGGAATTG AAAAGTCCTTACAGTTACTCACCGAAAGGGACATTCTCAGTGACTTGGAG TCAATATTCGTATGGTTTGAGCTCATGCACGACAGGCTTAGAGTAAGTAA AGAGTAAGTCTGCGACCGCAGTCAGAGGCGACCTGAAGGCTCCTCTTTCG ATAGCTATTTACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGAT TGCTCCACTTACCCTTGATCCTTTTCTTAATTGTTGAGTATCTAGTAGAT AGGCATCAAGTACCATTTTGGGAATCTTTGGTATGACCCGGCTGGGGGTT GAACCCACAACCTTGCGCACCGTAGCCGGATGCTCTACCACTGTAGTACG GTCGCTACTGCGGTATAGCAAGTATTCACGATATTCATGACGTAATCTTT TGTACGGAAGCTCTGAAAATAGCCTAGGCGTTTGATACTGATTTTATTGT TTGGATTCAAATTACACGTTTTTTTTCTTCATAAGAAACAACTATGTAAG AACACAAGGCTCAATGGATATTTTAAGGCTTGGTGGACTCAAAAACACAC TATTTCTTAGGAAAATTGTCAAAATAAAAACATGTTGAGAACATTTTTAG GCTTAAAAAAGTTAAGAACATCCGAAAGCTTCAAAACTTTTGGATACTCT TATAATAAAAAATGTTCAGTGGCAACCACCCGGGCTATTTTGGGTGCTTT ATTATACATTGTTAACCAGTTACTTTTCTGAAGAGGGCTACACAGCTTTT TGTGCAATACAATTGGTTCTTTTTGCATGACGACGGGCCTACATTGTCCA GAGTTAGGAAAATTCATTTTTGTGACGTCACATGAATATCATGAATAAAG GCTTGGTCTAGATCTACAATCAGCACCGAAATATATGTTGGCAATTTTGG GTATTTTAACGTATTTTAACGAATTGCAGTTTCAGTATTTCTACTTAGCT TCATTGGATTTTTCGATTTAGGAGGGGTTAAGTGGCTTCCAGGCTATATT ATCTACCTTATTGGAACATTTTTGAGCTTTTAGATCCTGAGATCCTAAAG TCTTAAGTGTAGTGTTAAAACTCTACTTCCGAACTGTACTTCAAAGCACT TAAAAATCACATGCGGTTTTAAAACTTCCCCGTAAATTTCCCCTTTTTCT CAAATATTATGACCTTGATTGTAAATCTATAGATAGTATTGATAGATTAC TTGGACCTCCAAGGAAAACCTAGGACATTTTGACACATTGTTTTTGATGG GGTCTGCGTTTTTTAGACTGAACGGAACGTGGGAGGAATGGTGTTCTCAT TGGGATAACGGCTTTGCGACCTGAAATAACTTTGGATATTCTCTGTAAAT CGAGATCTCTTGATCCCATTGCTGCTATTAGGACCGTTCGTTCGTTCGTT CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTGCTACCAGACTTAGATTAT TTCTGATTCAAATACACAATGATTGAAAATGGTGATGTTAAAAAGAAATT TCTCCGAGATTTAATCATAATTTTTCTCATCTTTTTTGTTTTCACCTTTT TAGTACTAAAACCTCATCAACCGGAGTCATGGCAACACCAAACTGGCCAT CATCCTCTACATATCCTTCAACCTGCTCCTGGAAACTTGATCGTTCAGAA TCTAACGGATATCTTATTCACGTTATGGACATTAAAGACCAAACTTATTC TTCTTATTGTTCCTCTAGCAAACAACAAATAACGATCAAAGGTAAGTTTC CAATACAAAACTCTGTTAAGTGTGTTTGGGACATCGAGGCATTTAAAACC AAACCTATTCTATTCTTATTGTCCCTCTAGTAAGCAACTTATAACGATCA AAGGTAAGTTTTTTGTTTTTCATAGAAATCTTTGTTAAGTGTGTTTGGAA CATCGAGGCAAATGTAAAATCAAACCTTTTCTTCGTTATTGTTCCTCTTA TGAACCACAAATAACGACCAAAGGTTAACTTTCTATACAAAACTATGTTA AGTGTACTAAATAAGAGATTAAACTTACGCATTTTTATCGTTATGGCGAC CAACGAATGACGATAAAATGTGAGCTAGTGAAATTGAGGTCCAGACCAAA ATATACCAAATATGGTAAAATGACAAATCTAATGAAATAAAATTTATTTA AAATCAGACCATCGAGTCTATCTTACCGCCATAAAATACGAGGACAGTTT AATAGTGGATACAATTCAAACTTCTTTTTTTTTAGACGAAGACAGTTATT CCTACGGGAAAGACATTTGCACCCGGGATAACGGGATTACTAACTATTAC AAACCTACTGTCAAAATTACCTACAAACGCGGGACTGATTGGAATAAGCG AGGCGTTGTCGTTGGATGGGTTGCTTTCAATAACCCTTATTACAGTAAGT AAACCCAAACAAAAAGATTTTAATATTTTCGTTTGTATGTCCTATCTTAG CCTGTACCAACCCCAGACCACTGACCTTTATATACCGTGGACCAAGTTTT TCAATCCCGGCCAAGCAAAATTCTTTGATCGGAGTTTTTTGAAAAGTGGT ACCCTAATGGCGGCACTACTCAATAGCGGTGTATATGCATCAAGAGCGCT AGATCTACTTTCCCTCGAAAACTTTTGATGATGTAGCGCCGTTAGATGTT AATTTTTAACACTGCAATGGCTTCTTTACGGATACCAATTCAAAAAAAAC TTCGATCAAAGATGGCGGATATAGCTTGGTCCAGGGATATATAAAGGTCA GTGCCCCAGATGCACATGGGCGATTTTCGCTTTTTGGTTGTCGTGTGTCG GTCTCTTACGGTTAGATAATTTTTTTTTCGCGCTAGTACCAGTCGAAAAA CAGGTGCGTGGGAGTGTTCTTTTGAAAGCCGCAAGAATTCATGGCACTGA GGTAATATCACTTTATTTAACGGGATTTGCTTGTTAAAAATAGAACACCA CTCCACTGCAGAAGAAACAAGAGACTGAGAATATATCTCAGTTACAGAAT GGTGCCTAACCGTTACAAACCGCACTTCGAAGTTGTTTTTTTTTACGAAA AAGAGGTTGGCAGAGACTACTAATTTTATTTTAGATATGTGTCTAAAATA AAATTAGTATAGTATAAAATGCCTAATATTGTAAAAGATTTATATTGAAT TGTAAAATTTAAGGTGCTTTCACGACCTGTCTTTTTACACATTTTTTATA AGAACGAACTATATAAGGCTTTGATGGCAAAAAATGTTAAGAACAGGTTA AGAACATTTTGATGCTTTGAGGACTCTCAAAACACTTTATTTCTTAGGAA AATGGACAAAAAATACTCCCAAAACGAGAAAAAAAAACATGTTAGTAACA CTTTTGGGCTTGAAACTCAAATGACACAATTAGAAATTTATGTTTGTTAC CAGTTCAGTACCATGCTGAGCTGCCTAAAAGCTCAGTCGTTATTGTCAGG GTTCGAAATACCGTTTTCCCGTTAAAAACCTTTGCTTAATCCCGGAATCC CGAAAATTGAAAAAAAATGATAACACCGTCACACCGGTTTATAGAGGTTC AAATACCGGCATAATGACAAAAAATAAGGCTAAATACCGTCACCGTCTAA TTTTAAAATACCGTTTTCCCGTCTATTTTTTCGTCAAATCCCATAATACC GTACTAAAAAAGAGCCAATCCCATCACTTTTACGGAAGTACAAACCCCCA TTCCCACTTAAAATATTAGTCATTATTTTTATACTATTATTAAAGTTACG AACATCCCAAGGCTTCAAAAAAATTTTGATGTTCTTTTTTTCATTCCAGC TAACTATGGATCTATCGGAGGGTATATTGCTGCCGGAATTCTTATTCCTT TGGTCCTTATTTGTATCATCGTGTGTGTTTGCTTGAAACAGAAGCGAGGC TATGTGTTCAGCCAAAGAGCCGCTTTTAATAACATGACACCACAAGGGAA CAACATGACTGTCGTCAACAACCAAACAGGTATTTCCATTGATTCTTTTT TATAACAAATAAAATAAAACTTAATCCTAATAAGCTCATCTTCTTGATTT CGGCATTCAAAATACAAAAAAGAGAGAGATGGTGAAATTTCTGAATATTT CGACTTCTTTATCGAGTCATTGTCAACACTGTCAAAATAGTCGAAATATT CATAAATTCCCTCTCTTTTTTGTATTTTGAATGTCGAAATCATTAATTCG GATTAAGTTTTCTTTTGCTATGAAGTGCCCTGGAGTTAGCAAGTATTTAC CTCGCCAAAAGCCGTGATTTTTTCCATTCCGTTTTTTGGCGAGTTACACT TTTGCACATTAACCATATTATTCATTTTATTTTTTGAATATCTTTTCCTT AGCAACGAATACAACTTCTCTTAATGAGGGAGCGAAGAATTATCCCGCCC AACAATATGTTCCACCACCCCAGCAAGGATATCCACCTCAACAACCAGCT TACCCACCACCCCAACAAGGTGCTTACCCACCCCAAGGTTATGCCCCGCC ACCTGGAGCTTATCCTCCACCAGGAGCATATCCACCGCCCATGCAAGGAT ATCCGCCCGTCTCTCAACAAGGATATGCTCAACCACCCTCCTACCAAGAA TCTGTACCAGCTCAACCACCTGCTCAATAAAATCGCTTAAAAGATCTAAT ATTGTCGGTACAGTCTATAGTTTTTACTATTTTTATTACATTTGTCAGCT AAGGGAACTCCTGCCTGCTCAGCTTCTTTTAGTAGAGAAAGTTGTTTATA TTGTGAACACAGTCTTCCAAGCTTGGAGGGTAAAAATAGTACGAAACAAT GTTTTTAATTGAAGAAGGGATTAAATATATATTATATATTATTATTATTA TTTTCTTATTTGAATTTTTGACTTTTTCTCAAAATGGCTACCGCGTCAAA TGCTCCTAATCTAGTACTTCACTGGTTTTAGATTTTGTAGAAATAGATTT GTAATTATCATGATTTTTTTATTTTAGATAATTTTGCATAATAAGAGTTT TATTTTATAAGAGTGATATAATATTAGATGGTTTACAATATTATAGGTTT GGTTTTTAAATAAGAGAGATATCGTTTGCTTACTCATCGATTTTAATTTA CAAGCTTTTTCACATTGGATTGACACGAATGTGGAGCAATATTGGTCAGA AAGAGGTAAAGAAAAACGTTATTTGCTTATATCAGCATAACATAACAATA GGCAGACATTGTCCTGATATGAAATAGGTGTCTGATATGAAACGGGAGCA CACTTATGTAAAAATAAAACCTAACATAATGATTTTTAAATTGCACACTT TTTCTATAAGAACAAAGTTACAAGAACACGAGGCTGAAAATATTGGTAAA AACCTAAGAATATCGTAAGAATATATATAAGCCAAAAAATTAAGAACATC CCAGCCTGAGTCAAAATTTACTGGTTTTTGTAAGAAAAAGCGTGTATAGC ATGAACATATAAAATTATAGGGACCAACTGAAACGCACAGATACAATTAT ACATTGTGCTTACAAATAATATATTATTATGTTTTATGTAAGAAAGACTT TTAAAGATTGTAATGTTATTATAATGATCCTATACACGCTTTCTTTATAA GAACATCCAAAATCCTCGAAGTCTTTGGATGTTCTTAGTTTCTTTGAGTT TTAAGCCTAAGAATGAATGTACTTATACGAGTCCTTATAAAAATGTTCTT AAATTTTCACCATTTTCTGAGTAATTTTTTCTGTATTTCCATTTAAAAAA TTAGATGTCTATAAAAA

Coding sequence (CDS) from alignment at sc0000072:605995..613211-

>TCONS_00006964 ID=TCONS_00006964|Name=TCONS_00006964|organism=Clytia hemisphaerica|type=CDS|length=7722bp|location=Sequence derived from alignment at sc0000072:605995..613211- (Clytia hemisphaerica)
CAACGAATACAACTTCTCTTAATGAGGGAGCGAAGAATTATCCCGCCCAA
CAATATGTTCCACCACCCCAGCAAGGATATCCACCTCAACAACCAGCTTA
CCCACCACCCCAACAAGGTGCTTACCCACCCCAAGGTTATGCCCCGCCAC
CTGGAGCTTATCCTCCACCAGGAGCATATCCACCGCCCATGCAAGGATAT
CCGCCCGTCTCTCAACAAGGATATGCTCAACCACCCTCCTACCAAGAATC
TGTACCAGCTCAACCACCTGCTCAATAACTAACTATGGATCTATCGGAGG
GTATATTGCTGCCGGAATTCTTATTCCTTTGGTCCTTATTTGTATCATCG
TGTGTGTTTGCTTGAAACAGAAGCGAGGCTATGTGTTCAGCCAAAGAGCC
GCTTTTAATAACATGACACCACAAGGGAACAACATGACTGTCGTCAACAA
CCAAACAGACGAAGACAGTTATTCCTACGGGAAAGACATTTGCACCCGGG
ATAACGGGATTACTAACTATTACAAACCTACTGTCAAAATTACCTACAAA
CGCGGGACTGATTGGAATAAGCGAGGCGTTGTCGTTGGATGGGTTGCTTT
CAATAACCCTTATTACATACTAAAACCTCATCAACCGGAGTCATGGCAAC
ACCAAACTGGCCATCATCCTCTACATATCCTTCAACCTGCTCCTGGAAAC
TTGATCGTTCAGAATCTAACGGATATCTTATTCACGTTATGGACATTAAA
GACCAAACTTATTCTTCTTATTGTTCCTCTAGCAAACAACAAATAACGAT
CAAAGATGTGGACAATATTCATGGGACCGAACAGAGATCGCAGAATTTTG
TTCAGGAAACATGATTTCATCTCTCCCTCACGACATTTATGCGTATACAA
ATTGTTTGAGATTGGAATTGAAAAGTCCTTACAGTTACTCACCGAAAGGG
ACATTCTCAGTGACTTGGAGTCAATATTCGTATGGTTTGAGCTCATGCAC
GACAGGCTTAGACCAAATATGGGCCGATCCAAAAGTTATTGGTTGTCACT
CGTTGCTCTACAATTGATATTAATGGCATTGCCAACTTGGTGCTATAGCT
GTTCAAAGGAGACTGTCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAAC
AAATATGGTTGCTCTAAAAAGACTTATGATATCAACCTTGGTACTACAAT
GGCTGTCAAAATGACTTGGTTGACTTTTGATAATATCCCTGGAGATATGC
CTTACTGTAGCGATGGTTATATCAAAGTTTATGCTGGCAACGAATACAAC
TTCTCTTAATGAGGGAGCGAAGAATTATCCCGCCCAACAATATGTTCCAC
CACCCCAGCAAGGATATCCACCTCAACAACCAGCTTACCCACCACCCCAA
CAAGGTGCTTACCCACCCCAAGGTTATGCCCCGCCACCTGGAGCTTATCC
TCCACCAGGAGCATATCCACCGCCCATGCAAGGATATCCGCCCGTCTCTC
AACAAGGATATGCTCAACCACCCTCCTACCAAGAATCTGTACCAGCTCAA
CCACCTGCTCAATAACTAACTATGGATCTATCGGAGGGTATATTGCTGCC
GGAATTCTTATTCCTTTGGTCCTTATTTGTATCATCGTGTGTGTTTGCTT
GAAACAGAAGCGAGGCTATGTGTTCAGCCAAAGAGCCGCTTTTAATAACA
TGACACCACAAGGGAACAACATGACTGTCGTCAACAACCAAACAGACGAA
GACAGTTATTCCTACGGGAAAGACATTTGCACCCGGGATAACGGGATTAC
TAACTATTACAAACCTACTGTCAAAATTACCTACAAACGCGGGACTGATT
GGAATAAGCGAGGCGTTGTCGTTGGATGGGTTGCTTTCAATAACCCTTAT
TACATACTAAAACCTCATCAACCGGAGTCATGGCAACACCAAACTGGCCA
TCATCCTCTACATATCCTTCAACCTGCTCCTGGAAACTTGATCGTTCAGA
ATCTAACGGATATCTTATTCACGTTATGGACATTAAAGACCAAACTTATT
CTTCTTATTGTTCCTCTAGCAAACAACAAATAACGATCAAAGATGTGGAC
AATATTCATGGGACCGAACAGAGATCGCAGAATTTTGTTCAGGAAACATG
ATTTCATCTCTCCCTCACGACATTTATGCGTATACAAATTGTTTGAGATT
GGAATTGAAAAGTCCTTACAGTTACTCACCGAAAGGGACATTCTCAGTGA
CTTGGAGTCAATATTCGTATGGTTTGAGCTCATGCACGACAGGCTTAGAC
CAAATATGGGCCGATCCAAAAGTTATTGGTTGTCACTCGTTGCTCTACAA
TTGATATTAATGGCATTGCCAACTTGGTGCTATAGCTGTTCAAAGGAGAC
TGTCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAACAAATATGGTTGCT
CTAAAAAGACTTATGATATCAACCTTGGTACTACAATGGCTGTCAAAATG
ACTTGGTTGACTTTTGATAATATCCCTGGAGATATGCCTTACTGTAGCGA
TGGTTATATCAAAGTTTATGCTGGCAACGAATACAACTTCTCTTAATGAG
GGAGCGAAGAATTATCCCGCCCAACAATATGTTCCACCACCCCAGCAAGG
ATATCCACCTCAACAACCAGCTTACCCACCACCCCAACAAGGTGCTTACC
CACCCCAAGGTTATGCCCCGCCACCTGGAGCTTATCCTCCACCAGGAGCA
TATCCACCGCCCATGCAAGGATATCCGCCCGTCTCTCAACAAGGATATGC
TCAACCACCCTCCTACCAAGAATCTGTACCAGCTCAACCACCTGCTCAAT
AACTAACTATGGATCTATCGGAGGGTATATTGCTGCCGGAATTCTTATTC
CTTTGGTCCTTATTTGTATCATCGTGTGTGTTTGCTTGAAACAGAAGCGA
GGCTATGTGTTCAGCCAAAGAGCCGCTTTTAATAACATGACACCACAAGG
GAACAACATGACTGTCGTCAACAACCAAACAGACGAAGACAGTTATTCCT
ACGGGAAAGACATTTGCACCCGGGATAACGGGATTACTAACTATTACAAA
CCTACTGTCAAAATTACCTACAAACGCGGGACTGATTGGAATAAGCGAGG
CGTTGTCGTTGGATGGGTTGCTTTCAATAACCCTTATTACATACTAAAAC
CTCATCAACCGGAGTCATGGCAACACCAAACTGGCCATCATCCTCTACAT
ATCCTTCAACCTGCTCCTGGAAACTTGATCGTTCAGAATCTAACGGATAT
CTTATTCACGTTATGGACATTAAAGACCAAACTTATTCTTCTTATTGTTC
CTCTAGCAAACAACAAATAACGATCAAAGATGTGGACAATATTCATGGGA
CCGAACAGAGATCGCAGAATTTTGTTCAGGAAACATGATTTCATCTCTCC
CTCACGACATTTATGCGTATACAAATTGTTTGAGATTGGAATTGAAAAGT
CCTTACAGTTACTCACCGAAAGGGACATTCTCAGTGACTTGGAGTCAATA
TTCGTATGGTTTGAGCTCATGCACGACAGGCTTAGACCAAATATGGGCCG
ATCCAAAAGTTATTGGTTGTCACTCGTTGCTCTACAATTGATATTAATGG
CATTGCCAACTTGGTGCTATAGCTGTTCAAAGGAGACTGTCACTGGCTCT
TTTGGCTCTTTGTCTGGTGGAAACAAATATGGTTGCTCTAAAAAGACTTA
TGATATCAACCTTGGTACTACAATGGCTGTCAAAATGACTTGGTTGACTT
TTGATAATATCCCTGGAGATATGCCTTACTGTAGCGATGGTTATATCAAA
GTTTATGCTGGCAACGAATACAACTTCTCTTAATGAGGGAGCGAAGAATT
ATCCCGCCCAACAATATGTTCCACCACCCCAGCAAGGATATCCACCTCAA
CAACCAGCTTACCCACCACCCCAACAAGGTGCTTACCCACCCCAAGGTTA
TGCCCCGCCACCTGGAGCTTATCCTCCACCAGGAGCATATCCACCGCCCA
TGCAAGGATATCCGCCCGTCTCTCAACAAGGATATGCTCAACCACCCTCC
TACCAAGAATCTGTACCAGCTCAACCACCTGCTCAATAACTAACTATGGA
TCTATCGGAGGGTATATTGCTGCCGGAATTCTTATTCCTTTGGTCCTTAT
TTGTATCATCGTGTGTGTTTGCTTGAAACAGAAGCGAGGCTATGTGTTCA
GCCAAAGAGCCGCTTTTAATAACATGACACCACAAGGGAACAACATGACT
GTCGTCAACAACCAAACAGACGAAGACAGTTATTCCTACGGGAAAGACAT
TTGCACCCGGGATAACGGGATTACTAACTATTACAAACCTACTGTCAAAA
TTACCTACAAACGCGGGACTGATTGGAATAAGCGAGGCGTTGTCGTTGGA
TGGGTTGCTTTCAATAACCCTTATTACATACTAAAACCTCATCAACCGGA
GTCATGGCAACACCAAACTGGCCATCATCCTCTACATATCCTTCAACCTG
CTCCTGGAAACTTGATCGTTCAGAATCTAACGGATATCTTATTCACGTTA
TGGACATTAAAGACCAAACTTATTCTTCTTATTGTTCCTCTAGCAAACAA
CAAATAACGATCAAAGATGTGGACAATATTCATGGGACCGAACAGAGATC
GCAGAATTTTGTTCAGGAAACATGATTTCATCTCTCCCTCACGACATTTA
TGCGTATACAAATTGTTTGAGATTGGAATTGAAAAGTCCTTACAGTTACT
CACCGAAAGGGACATTCTCAGTGACTTGGAGTCAATATTCGTATGGTTTG
AGCTCATGCACGACAGGCTTAGACCAAATATGGGCCGATCCAAAAGTTAT
TGGTTGTCACTCGTTGCTCTACAATTGATATTAATGGCATTGCCAACTTG
GTGCTATAGCTGTTCAAAGGAGACTGTCACTGGCTCTTTTGGCTCTTTGT
CTGGTGGAAACAAATATGGTTGCTCTAAAAAGACTTATGATATCAACCTT
GGTACTACAATGGCTGTCAAAATGACTTGGTTGACTTTTGATAATATCCC
TGGAGATATGCCTTACTGTAGCGATGGTTATATCAAAGTTTATGCTGGCA
ACGAATACAACTTCTCTTAATGAGGGAGCGAAGAATTATCCCGCCCAACA
ATATGTTCCACCACCCCAGCAAGGATATCCACCTCAACAACCAGCTTACC
CACCACCCCAACAAGGTGCTTACCCACCCCAAGGTTATGCCCCGCCACCT
GGAGCTTATCCTCCACCAGGAGCATATCCACCGCCCATGCAAGGATATCC
GCCCGTCTCTCAACAAGGATATGCTCAACCACCCTCCTACCAAGAATCTG
TACCAGCTCAACCACCTGCTCAATAACTAACTATGGATCTATCGGAGGGT
ATATTGCTGCCGGAATTCTTATTCCTTTGGTCCTTATTTGTATCATCGTG
TGTGTTTGCTTGAAACAGAAGCGAGGCTATGTGTTCAGCCAAAGAGCCGC
TTTTAATAACATGACACCACAAGGGAACAACATGACTGTCGTCAACAACC
AAACAGACGAAGACAGTTATTCCTACGGGAAAGACATTTGCACCCGGGAT
AACGGGATTACTAACTATTACAAACCTACTGTCAAAATTACCTACAAACG
CGGGACTGATTGGAATAAGCGAGGCGTTGTCGTTGGATGGGTTGCTTTCA
ATAACCCTTATTACATACTAAAACCTCATCAACCGGAGTCATGGCAACAC
CAAACTGGCCATCATCCTCTACATATCCTTCAACCTGCTCCTGGAAACTT
GATCGTTCAGAATCTAACGGATATCTTATTCACGTTATGGACATTAAAGA
CCAAACTTATTCTTCTTATTGTTCCTCTAGCAAACAACAAATAACGATCA
AAGATGTGGACAATATTCATGGGACCGAACAGAGATCGCAGAATTTTGTT
CAGGAAACATGATTTCATCTCTCCCTCACGACATTTATGCGTATACAAAT
TGTTTGAGATTGGAATTGAAAAGTCCTTACAGTTACTCACCGAAAGGGAC
ATTCTCAGTGACTTGGAGTCAATATTCGTATGGTTTGAGCTCATGCACGA
CAGGCTTAGACCAAATATGGGCCGATCCAAAAGTTATTGGTTGTCACTCG
TTGCTCTACAATTGATATTAATGGCATTGCCAACTTGGTGCTATAGCTGT
TCAAAGGAGACTGTCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAACAA
ATATGGTTGCTCTAAAAAGACTTATGATATCAACCTTGGTACTACAATGG
CTGTCAAAATGACTTGGTTGACTTTTGATAATATCCCTGGAGATATGCCT
TACTGTAGCGATGGTTATATCAAAGTTTATGCTGGCAACGAATACAACTT
CTCTTAATGAGGGAGCGAAGAATTATCCCGCCCAACAATATGTTCCACCA
CCCCAGCAAGGATATCCACCTCAACAACCAGCTTACCCACCACCCCAACA
AGGTGCTTACCCACCCCAAGGTTATGCCCCGCCACCTGGAGCTTATCCTC
CACCAGGAGCATATCCACCGCCCATGCAAGGATATCCGCCCGTCTCTCAA
CAAGGATATGCTCAACCACCCTCCTACCAAGAATCTGTACCAGCTCAACC
ACCTGCTCAATAACTAACTATGGATCTATCGGAGGGTATATTGCTGCCGG
AATTCTTATTCCTTTGGTCCTTATTTGTATCATCGTGTGTGTTTGCTTGA
AACAGAAGCGAGGCTATGTGTTCAGCCAAAGAGCCGCTTTTAATAACATG
ACACCACAAGGGAACAACATGACTGTCGTCAACAACCAAACAGACGAAGA
CAGTTATTCCTACGGGAAAGACATTTGCACCCGGGATAACGGGATTACTA
ACTATTACAAACCTACTGTCAAAATTACCTACAAACGCGGGACTGATTGG
AATAAGCGAGGCGTTGTCGTTGGATGGGTTGCTTTCAATAACCCTTATTA
CATACTAAAACCTCATCAACCGGAGTCATGGCAACACCAAACTGGCCATC
ATCCTCTACATATCCTTCAACCTGCTCCTGGAAACTTGATCGTTCAGAAT
CTAACGGATATCTTATTCACGTTATGGACATTAAAGACCAAACTTATTCT
TCTTATTGTTCCTCTAGCAAACAACAAATAACGATCAAAGATGTGGACAA
TATTCATGGGACCGAACAGAGATCGCAGAATTTTGTTCAGGAAACATGAT
TTCATCTCTCCCTCACGACATTTATGCGTATACAAATTGTTTGAGATTGG
AATTGAAAAGTCCTTACAGTTACTCACCGAAAGGGACATTCTCAGTGACT
TGGAGTCAATATTCGTATGGTTTGAGCTCATGCACGACAGGCTTAGACCA
AATATGGGCCGATCCAAAAGTTATTGGTTGTCACTCGTTGCTCTACAATT
GATATTAATGGCATTGCCAACTTGGTGCTATAGCTGTTCAAAGGAGACTG
TCACTGGCTCTTTTGGCTCTTTGTCTGGTGGAAACAAATATGGTTGCTCT
AAAAAGACTTATGATATCAACCTTGGTACTACAATGGCTGTCAAAATGAC
TTGGTTGACTTTTGATAATATCCCTGGAGATATGCCTTACTGTAGCGATG
GTTATATCAAAGTTTATGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003888XLOC_003888Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006964-proteinTCONS_00006964-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006964-exon-sc0000072-1575043694:612935..613211TCONS_00006964-exon-sc0000072-1575043694:612935..613211Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1575043694:611720..611926TCONS_00006964-exon-sc0000072-1575043694:611720..611926Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1575043694:610021..610208TCONS_00006964-exon-sc0000072-1575043694:610021..610208Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1575043694:609368..609526TCONS_00006964-exon-sc0000072-1575043694:609368..609526Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1575043694:607783..607962TCONS_00006964-exon-sc0000072-1575043694:607783..607962Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1575043694:605995..607409TCONS_00006964-exon-sc0000072-1575043694:605995..607409Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1510915933:612935..613211TCONS_00006964-exon-sc0000072-1510915933:612935..613211Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1510915933:611720..611926TCONS_00006964-exon-sc0000072-1510915933:611720..611926Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1510915933:610021..610208TCONS_00006964-exon-sc0000072-1510915933:610021..610208Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1510915933:609368..609526TCONS_00006964-exon-sc0000072-1510915933:609368..609526Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1510915933:607783..607962TCONS_00006964-exon-sc0000072-1510915933:607783..607962Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1510915933:605995..607409TCONS_00006964-exon-sc0000072-1510915933:605995..607409Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1491911889:612935..613211TCONS_00006964-exon-sc0000072-1491911889:612935..613211Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1491911889:611720..611926TCONS_00006964-exon-sc0000072-1491911889:611720..611926Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1491911889:610021..610208TCONS_00006964-exon-sc0000072-1491911889:610021..610208Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1491911889:609368..609526TCONS_00006964-exon-sc0000072-1491911889:609368..609526Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1491911889:607783..607962TCONS_00006964-exon-sc0000072-1491911889:607783..607962Clytia hemisphaericaexon
TCONS_00006964-exon-sc0000072-1491911889:605995..607409TCONS_00006964-exon-sc0000072-1491911889:605995..607409Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:605995..613211 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.64883 3.80983 14.8584 19.47 3.45286 2.82047 2.73632 2.92767 3.16089 5.45425 8.70177 3.64635 27.4231 26.2717 24.7268 33.7491 20.807 22.1245 34.5833 31.1975 25.818 29.7798 18.5589 20.7094 21.2368 19.3654 13.2897 13.9654 54.0503 43.6189
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006964 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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