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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006938 ID=TCONS_00006938|Name=TCONS_00006938|organism=Clytia hemisphaerica|type=transcript|length=5656bp
CAATCATCATAAAAAAATACCATAATATTATTACAAGCTATAAAAGCTAT
AATAAccattgtttacattttaccaCACTATGGAGATAATGGCACGAAAC
AATGGGAACACTGAAGCTAAATATTATGGAGATAACAACATGTGGAGAAT
TAATAATAACAAGTCAGAGGCAAACTGTGAAGTATTGAGTTTTGATAATG
AGAAATACAGCCCTGCAACGAGGCGAAAATTCAAAGACATTTGTCAAGAG
AATCCACTATTTTATCAACCTCCTGGTATTATAGAATCAGCTGATATCAT
AAACACAAAAACTAGTGGTAATAGTACAGCGGTTAANCTATAGAATCGGC
TGATatcataaaaacaaaaactagtGGTAATTGTACAGCGGTTAAAACTG
ATTCGAAATTGAGAGATGATAATGGTAAGAGTGAGTGggacaaatgtaaa
caaaccaatGACACGAAAGTTCATGATGATGATGGTGCTTGTAATGATTT
CGTTGTAATCGAGGAAACAAAAAGCACTCGTGATTTGGTCGCTTTCTTCA
ACGGAAACCAGACTGAGAATAGTCAAAACGAGGTTGGAAAACAACGTGTA
AACGAGGTAACACGACGCGGATCTGAGACTAAAGAACAACGTTCGAAAAC
GAATCAAACACAAACCTTAACCAAGGTGTCAGAATCCAAAGTCGGATTGG
ATTTGAATGCGAACGAGACTGGACTTAACCAGGACGAGTTTCGTGTCGAA
AAATCACCCATCCCACCATATAACGGACAACGGAGACAAAGTTTGACTGT
TAACGGGCAGCTAGTCGAGTTTTCTTCTGAAGGACAATTTTCCTGGAAAA
CCCCAAACAATCGATTTTATTCGAACATTTATCGAGACCAAAACGCGATG
CTTTATTCCAAAGAAGTCGGGATCGATATCGGGGAAACTAACGAGGATAA
TTTATCCCGATCGGATTCTTTACCAGTGGAACGTAAAAGTTGTATAAACG
AGATGAATAATAATGAACGAATTGATTTGGGTGATCGAGACCAGATTAAA
GGATTTGAGATAAACGAGACTTCGCTCAAGGACTTAAAAACTGATAATGT
ACATTCTATAAAGGATATGCAAGATCAAACTTTACCGAACCATCAAAACG
CGAATGAAAATTCTGGTGAAGATAAGATCGTTAATACTGTTTCAACCGAT
AAGCGAAATGATGAGACTCCAACACGTGTGGATTATCAAGACAGATGGTC
TTTAGAAGTTGAATCATCAAGTCAAAACAATAAAGACACGTATTTGCTTG
AACAATCGAGTCCACTTGATATTTTAAATGGGCCCGCGAGGAAATCTTCA
CATATTGAAGAAAGCTTGAACACTGAAATCAATGCCGATGAACGTTCTTT
TGAAGACTGTTATTTAGTATCTGTCTCGAAAAGTCCAATTGCTGACAACA
TCATGTTCGAAAACTACCCTAAAACCAACACGGAAGATAATAAAACGTAC
TTCAAAAGTACAAACGAGAACGTTATGAGGGATTCTGGGATTTCGATTCC
TGATACAGATGAAGTAGATTTGTCCGAAATTTACTTCGATCAAACCGATA
TTGATCCTTTATCGGACACTTTAGTACCGCATCATTACCATAAATTGATT
TCATTGACTCGTAGCGACTTTCTTAGTACGGGAGGAGAAACATGTGAATC
TAACTTTGATCCGATTCTGGAACAAGAAGACTCTCCCATGCTTGCAGACC
CTCGAGATGAAAGCCAAAACGAGGTACATACTATGATTGATAATTCATTA
CTTCAACCAGAGCCATCCAGTCAACACCAAGAGGATGCATCGATAGATGA
TCACGAGTCTCTCTTAATCAAAACCGACACCCTGCAACCGTCTGCTTCTA
ATTTCACCGAAGACTTGCACCGAACCAGCCCTGTTTTATCACATAACCAA
AAACGACCCAAATCACCTGCCAGTCAGAAATTATACCGTCGAAGCCCAGT
TATCAGTCACAAGAGACCAAATTCTACACCGAAAGACTTCAAAGACAGTA
TACAAAATTGCAATAGCACTACCTCTGAAAATGATAGTCTACACCAAAAC
CTTTACCAAATGGACAACGATCTACCGGCTAGAGCAGTAACCGACGTTCT
TAAAAACACTACTCCCAAACCCATTGAAGATACCAATCCAGCAGACCCTA
TTAATACAGAAACAACAACTTTCTCTCTTGATTCAGCTCAAAATGAAGTT
TCCACATTTTCTGACAAAACAGACGAAAATGAGGGTCCACAATTTGAACA
AAcagttttgaatgaaaacatttcgaAGCAAACAATATCAACGAAAAAGG
TTAAACCCTTAAGACGAGTCACAGTTATACGTAAATATATCGAGCCTAAG
AAATCAATAattgaaaaaggatttttgTTTAGTCAACAAAATGATATTGG
ACCAAATTTGAATTGTAGACGTAGGTCTTTGAGTGAGAGTGACCTCTCGT
TTTTGACAGGTGGGAGTGACAATTTATTACGAACGGAAGATTGTTTTGAG
AGCCACCCATTACGGTTGCATAGTCTCAGTTGCAGTGACTTACGCGATTA
CGAAGAACGTTACCACCTTGACGAAAGTGAATCGACTTGTTACGACTCAG
ATACTTTCAGTTACGACAGTGAATCTGGAAGTAACGATCTTAAAGACGAA
GATTGCGAACAAGATTCTATCATCGATGATAATCCACCGAtcgtgaaaaa
gaaattaactaAGAAAAAATCGTTTATCGGGAAGAGTATTAGTGTTGACT
TACTTCCCGAAGCCGATCGGTATTTTTCGAATATCCGAAACCGTCGTAAC
GGGATTATAACCGACGTCGGACAGGACGAAAGTTTTGACGAAGTCACCGA
AGACTATATCGGAGATTTGTTGGAGTTTAAGAAATTCTACAAAAAGCCGA
AAAAGGGACTACGAATCGCGAAATCGGTTGAGAGCATCTTTCACGCCCCT
TCAAAAGAGTCATTAAACGAACAAACTACCGGATCCAAACCAAAACGAGG
ATTTTTGTCGGGATTATTTACGAGAAGCGAGAAAATGGAGTATTCTCGGG
ATTCGGGTGAAGCCGACGATGACGGGGCGCCGAATCCGAAAATATCCGTC
GTTGGTGGGTCGGTGAAAAAAGTTGCCGGGGTAACCGAACTGTTCATCAA
CTCCCAAGGAGATGTTATACGCAAAATCGAGATCAAACGTATCCCAGGAC
AAAGTCTTGGGTTTTTCATTCGATTCGGGAATGGTGTCGATCGCGTCGAT
GGGATCTTCATATCACGTGTGACATTGGGAAGTTTCGTGGATGAAAACAA
CCTGTTACATTCTGGAGATGAGATTCTAAAGATCAATAAGATTAATGTGA
CCGACCGAACGTTAGAAGAAGTCGCCAAGATCATGCAAAGTTCACAAAAA
CTACTTCTCAAAACGAGATCCGCCCTACCCCTCCCTATGAACGCCAGTCC
TCTCATACGAAACTACactaaaaaacaacaaaaagctTCAGAGGACCCGA
AGAATTATTCATCCCTAATGAAGATGGTATCCCAAGAGGACCAATTGTCG
GCCAAGAAAATGAACCGCACGATCAGCGATCCGCACGATGATCAATCCTC
AGGTAATCACACGCCTGTCACCAGAGAACGCTCCGTCAGCCTTGATCATA
AGGATAAAGTGTTCACGCGTGGACAAATGTATCGAAATGGGCCAACCCGA
AGTCCGGTGTATGACCGTAAGCTACCTGCTATCCCAGACGAAAATACAGG
AGGTGGTGGAAAAAGCCCCGAATCGGAAGGATATCATCGAGCTTTCTCAC
GCGCGTCGAGATACCAAGCTGAAAAGAAGCCAGAGCCGAGTACGTTATGT
CCAACGCAACCCAGCCATGTTGGAGCAAAATCACCTGGCTTGTTTCGTCG
AAACGAGCGCAAGAAGAGCGGAGAGGGTATGTTCACAGCGCCGTCAAATG
ACAGCTTATCGTCCATGTCGGATGATGAAAATGCCGGCGACGAACGGCTT
CACGTCTTTCCAAGTGACAACCCAACACCATCAGACGGGTTAAAATCGTA
TACCGGTAAACTGGCCGTTTCGATTTATAAAATGATTGGAAGGTTGTCTG
GAATCGAGGCTGATTGTTATTGTACGATTGAAGTTGATGGCGAATCTAAA
GCTTCAACCCAGCACCAAAAGATCAAAGAACTTGTCAATTTTAATGAGAG
TTTCGAAATCGAATTACAAAAAGCAACAGTGTTgtctttcttcatttttc
ataaacACGGCAAGAAAAGTCACAAACTTGCCAGCCAATCACATATTTAT
TTGGAAAACGTTTTAAGTCAAAGCGAGACTAAAAAGAAACTGCTTCTTGG
TACATCGAGTCATGTCCAAATGCGGATTAAGCTTAATTTCACTGCGGCGG
AGTCGTACACGCAACGCTCTCACTCGTTGAGGCAGAACGGTGTATTCGGA
TTCAACTTAGCGAAAACGTTAGCTAAAGAGGAAAATACGATCCCAGTTAT
CGTGCGAAAATGTGTGGAAGAGATCGAGAAACGAGCTCTCGAGATTGTTG
GAATTTATCGTATCAGTGGAAACGCGCGAAAGAAGAAACACCTTCGTGCC
CAGTTCGAGGAGAATAGCTTAGCGGTCGATACGTCCAATGAGCATGAAGT
TGATTGTCACGTGTTAGCTGGCATATTGAAAGATTATCTACGCGAGTTAC
CAAACCCGTTGATTTCGGATAATATGTATCATAACATCTATAATAAGGGT
TGCGTTAAAAATAAAGACCAGAATAATTTGTTAAGAGAATTGTTGAAAGA
ACTGCCTTATACGAATCGAGCTACGTTGATTTATATCATGGATCATTTAA
AACGTGTCGCTGCTAAGAGTGAAGTTAATAAAATGACTCACCAAAATTTG
GCAGTTTGTTTCGGTCCTGTAATGATGTCGTCGCCCGTGGCAACAGCAGC
CATGTTAGATTTTAAGAAACAGATTGACGCTCTGGAGTTTTTGTTGAATA
TATGGCCTGTTAGTGTTGAACTTCAAAATGGGATTTAGTAGTTATTTTGG
TAGtagtttttgtaaatatttttcttttgaggtCTTCTTTCAATTTGAGT
CGGAAATTATACGTAACATTTTAACTTAAAACTGATTGAATTGAATGAAT
AGTCATAAAAACTTGGAATAAATAGACCTTGCTTTACATATTAAAGgtca
aagttaattttttatcgGTCATgcaatttgaaaaatctgtcTAATTTACC
GAAACTAAAGTCAATTCACTTTAAGTGTTCATATGTTCTTGCTTTCGAAC
CACTCTCATTTCAAGGGAATTTATCTGATTAGGCTGATATGGTCTTCATT
TATTAAAAAGAACTGAGAGTGCTTAAAGGGGAATGAACTTGGGTagtaaa
ttttattttggttgatACGGAGATCGATTTAATGTGAACCAAAAAAGTTT
GGAAAAAAGAAGATTctctttcttctctttcttgCGAAGATTCGTCAGGC
ACTTCTTATTATGTTAAATTGTATTTAAGATTTTCTTTAAACCCTAAAAA
CGTTGTATGAATTATTTTTACGAGGCAAAAATTTTTACGAAatttatatg
aaaaat Run BLAST on NCBI transcript from alignment at sc0000072:373003..381925- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006938 ID=TCONS_00006938|Name=TCONS_00006938|organism=Clytia hemisphaerica|type=transcript|length=8923bp|location=Sequence derived from alignment at sc0000072:373003..381925- (Clytia hemisphaerica)
CAATCATCATAAAAAAATACCATAATATTATTACAAGCTATAAAAGCTAT
AATAACCATTGTTTACATTTTACCACACTATGGAGATAATGGCACGAAAC
AATGGGAACACTGAAGCTAAATATTATGGAGATAACAACATGTGGAGAAT
TAATAATAACAAGTCAGAGGCAAACTGTGAAGTATTGAGTTTTGATAATG
AGAAATACAGCCCTGCAACGAGGCGAAAATTCAAAGACATTTGTCAAGAG
AATCCACTATTTTATCAACCTCCTGGTATTATAGAATCAGCTGATATCAT
AAACACAAAAACTAGTGGTAATAGTACAGCGGTTAANCTATAGAATCGGC
TGATATCATAAAAACAAAAACTAGTGGTAATTGTACAGCGGTTAAAACTG
ATTCGAAATTGAGAGATGATAATGGTAAGAGTGAGTGGGACAAATGTAAA
CAAACCAATGACACGAAAGTTCATGATGATGATGGTGCTTGTAATGATTT
CGTTGTAATCGAGGAAACAAAAAGCACTCGTGATTTGGTCGCTTTCTTCA
ACGGAAACCAGACTGAGAATAGTCAAAACGAGGTTGGAAAACAACGTGTA
AACGAGGTAACACGACGCGGATCTGAGACTAAAGAACAACGTTCGAAAAC
GAATCAAACACAAACCTTAACCAAGGTGTCAGAATCCAAAGTCGGATTGG
ATTTGAATGCGAACGAGACTGGACTTAACCAGGACGAGTTTCGTGTCGAA
AAATCACCCATCCCACCATATAACGGACAACGGAGACAAAGTTTGACTGT
TAACGGGCAGCTAGTCGAGTTTTCTTCTGAAGGACAATTTTCCTGGAAAA
CCCCAAACAATCGATTTTATTCGAACATTTATCGAGACCAAAACGCGATG
CTTTATTCCAAAGAAGTCGGGATCGATATCGGGGAAACTAACGAGGATAA
TTTATCCCGATCGGATTCTTTACCAGTGGAACGTAAAAGTTGTATAAACG
AGATGAATAATAATGAACGAATTGATTTGGGTGATCGAGACCAGATTAAA
GGATTTGAGATAAACGAGACTTCGCTCAAGGACTTAAAAACTGATAATGT
ACATTCTATAAAGGATATGCAAGATCAAACTTTACCGAACCATCAAAACG
CGAATGAAAATTCTGGTGAAGATAAGATCGTTAATACTGTTTCAACCGAT
AAGCGAAATGATGAGACTCCAACACGTGTGGATTATCAAGACAGATGGTC
TTTAGAAGTTGAATCATCAAGTCAAAACAATAAAGACACGTATTTGCTTG
AACAATCGAGTCCACTTGATATTTTAAATGGGCCCGCGAGGAAATCTTCA
CATATTGAAGAAAGCTTGAACACTGAAATCAATGCCGATGAACGTTCTTT
TGAAGACTGTTATTTAGTATCTGTCTCGAAAAGTCCAATTGCTGACAACA
TCATGTTCGAAAACTACCCTAAAACCAACACGGAAGATAATAAAACGTAC
TTCAAAAGTACAAACGAGAACGTTATGAGGGATTCTGGGATTTCGATTCC
TGATACAGATGAAGTAGATTTGTCCGAAATTTACTTCGATCAAACCGATA
TTGATCCTTTATCGGACACTTTAGTACCGCATCATTACCATAAATTGATT
TCATTGACTCGTAGCGACTTTCTTAGTACGGGAGGAGAAACATGTGAATC
TAACTTTGATCCGATTCTGGAACAAGAAGACTCTCCCATGCTTGCAGACC
CTCGAGATGAAAGCCAAAACGAGGTACATACTATGATTGATAATTCATTA
CTTCAACCAGAGCCATCCAGTCAACACCAAGAGGATGCATCGATAGATGA
TCACGAGTCTCTCTTAATCAAAACCGACACCCTGCAACCGTCTGCTTCTA
ATTTCACCGAAGACTTGCACCGAACCAGCCCTGTTTTATCACATAACCAA
AAACGACCCAAATCACCTGCCAGTCAGAAATTATACCGTCGAAGCCCAGT
TATCAGTCACAAGAGACCAAATTCTACACCGAAAGACTTCAAAGACAGTA
TACAAAATTGCAATAGCACTACCTCTGAAAATGATAGTCTACACCAAAAC
CTTTACCAAATGGACAACGATCTACCGGCTAGAGCAGTAACCGACGTTCT
TAAAAACACTACTCCCAAACCCATTGAAGATACCAATCCAGCAGACCCTA
TTAATACAGAAACAACAACTTTCTCTCTTGATTCAGCTCAAAATGAAGTT
TCCACATTTTCTGACAAAACAGACGAAAATGAGGGTCCACAATTTGAACA
AACAGTTTTGAATGAAAACATTTCGAAGCAAACAATATCAACGAAAAAGG
TTAAACCCTTAAGACGAGTCACAGTTATACGTAAATATATCGAGCCTAAG
AAATCAATAATTGAAAAAGGATTTTTGTTTAGTCAACAAAATGATATTGG
ACCAAATTTGAATTGTAGACGTAGGTCTTTGAGTGAGAGTGACCTCTCGT
TTTTGACAGGTGGGAGTGACAATTTATTACGAACGGAAGATTGTTTTGAG
AGCCACCCATTACGGTTGCATAGTCTCAGTTGCAGTGACTTACGCGATTA
CGAAGAACGTTACCACCTTGACGAAAGTGAATCGACTTGTTACGACTCAG
ATACTTTCAGTTACGACAGTGAATCTGGAAGTAACGATCTTAAAGACGAA
GATTGCGAACAAGATTCTATCATCGATGATAATCCACCGATCGTGAAAAA
GAAATTAACTAAGAAAAAATCGTTTATCGGGAAGAGTATTAGTGTTGACT
TACTTCCCGAAGCCGATCGGTATTTTTCGAATATCCGAAACCGTCGTAAC
GGGATTATAACCGACGTCGGACAGGACGAAAGTTTTGACGAAGTCACCGA
AGACTATATCGGAGATTTGTTGGAGTTTAAGAAATTCTACAAAAAGCCGA
AAAAGGGACTACGAATCGCGAAATCGGTTGAGAGCATCTTTCACGCCCCT
TCAAAAGAGTCATTAAACGAACAAACTACCGGATCCAAACCAAAACGAGG
ATTTTTGTCGGGATTATTTACGAGAAGCGAGAAAATGGAGTATTCTCGGG
ATTCGGGTGAAGCCGACGATGACGGGGCGCCGAATCCGAAAATATCCGTC
GTTGGTGGGTCGGTGAAAAAAGTTGCCGGGGTAACCGAACTGTTCATCAA
CTCCCAAGGAGATGTTATACGCAAAATCGAGATCAAACGTATCCCAGGAC
AAAGTCTTGGGTTTTTCATTCGATTCGGGAATGGTGTCGATCGCGTCGAT
GGGATCTTCATATCACGTGTGACATTGGGAAGTTTCGTGGATGAAAACAA
CCTGTTACATTCTGGAGATGAGATTCTAAAGATCAATAAGGTATGTGTGA
TTTGATTACCCATTTCATCTTCCAAATTTCTTTCGGTTTATGTTTGACTG
TATTTATATGTTTTAGCTAAGCTAAGTCTTGAGAATGTTTTTGCTTAGAT
GCAGAATTCGCTGGTTAGTTGTGTTATGTTGTGTCGATTGTCTTAAAATT
CTACAAAATCAAAGAAACTGCTCAAATAGACCTTTTCATAAATTATGTCA
CGAACATCACTTGCCTCGTATTCAAACAATTACCATGGTGATTATATCTC
TTGAGACATTTTAAATGATTTTTTTATGAATAAAGAAAGGAGTTTTAATA
AAATCCGTTGGGAGTTGGGAGTCACCATGGCAATAATTTCAGAACGAGGT
AAGTGATGTTCTTGACGTAATTTATGAAAAGGTCTATTAGGTAATTGCAA
TGAATTAAGTCTTAGAACCAGTGAAGTCACGTCTCTAGATTTTAATGTCA
TTCAAGAATCGAAAAAATGTAATGAATTTCATATTTGTAACTCTTTCTGT
TAGGTTCATCATTTCCGCATTATGCATGAATTTTACAAACCGTAAGCTAT
GAATTCAAATGTTTGTCCTTTTGAGTCGTATTTGAGTTGGTCATTTATGA
AAATAAAACAGGGGTTCAAAGTATGACTAATAGTCATATCGTCATAGGCT
TGTTCATACATAGATGAGCCCTGTTTATCTTGTCTGCCTACGTGTGAGCG
TGTGAGTAGCGAGAAAGTGGTAATCACATGAATGAGCCCTTTGATGAAAC
ACTTAAAATGAGTTGAGTGGAAGTTTTATCATGAACGAGTTAATCAGTAA
ATTGTAACATTTGTTATACTTGATTTACACATTGCTCCTTTACTTAGAGC
GTCTTTGGTGATACAATTCCACTTTTATCAATACTATCAGCATTTGTTAT
AAACGTAGCTACTAATTCTGATAATATACGTATTTGAACTGTATTGAGGT
TTAATTGAAAATTGAAAATTGGTTTTGCTTGAGATAAATTCAAAAAAGAG
GATGAAGATTTTAATAAACAGTAGTGATTTTTCTCAGGTAAGCATATCCT
CAACTTGATTTGAATTGAAGAGAATCTAGGCTAAGATGGGAATGGAAATT
TAACATGATTCTATACTTAAATGGTAAAAAAATGAATTTTATTACTTTAC
AGTAATGGTAAAAAATATCCTTTCTCAACTTGATCTAAAAAAGGCTAAGA
GTTTGATGTGAATTTCACACGGTTGATTTTCGAAGAAAATACATCCATTT
CGATAGGTGCTGTCTAAGTTGACATTTCATGACGTCAATTCGTTTGATAT
AATTCTATTTTACCAGGTCTTTCTAACTGTCATAGATGGGACTTTTTTTC
GTGTGAAATTTAAACAGCCAAAGTCCTTTATTTGTCTAGAACATTAAAAA
ACGCTGAATTTGTTCAAAAAAGTAAATTTGGATCAATCGTTATTTAATTT
GAATGGTTGTATCGTTTTGTCTTAGATTTTATCTAAAGTTTTGGATATCG
TCGATATGAGTTGTTAACTCTTTAGTTTAACGTTTTAACTTTCCTTCTGG
AAACACCCCTGTATCAAAGACTCTCCAGTTACTTGGTTATACGGTTATAA
CCAATGCGGTACAAAATAAAGGCTAAATTCCATTGAAGAAGGAAAACTTC
ATGTCCTTAAGTTCGTAGAGTTTGATAATTCAGTGATGATTCTCAAAGTT
TTCATACGGTTTCGCAGTGGGGACGAGGCTTGAGTTTAGTTTCCAATAAA
GATTACAGCATTTTTATAACGCTTTCTCCACTTTTATCGATTTTACCCCG
ATTTTTTGGAGAGTGAAGGATACCCCCATCGGATATGTGATATACTGGGA
TGTATTTTTTATCGATTTGAAAACTTTTACAAAACTTACTTAGTATCTGA
GCCGCCTTGTTTTTATTGGGGTTTTAATTTGTCAAATAAGTACGATTTTA
CCCAATAATTTTGGCCTCAAAGTTGCTTAAATACACTCACATAAATATTA
CTTTAGGAAAAATATCTAATTTCATTTAATGACCTAATGATTTAAATACT
TGATATGAGGATTAACGTAATCCTTCTGTTTTTCTTTCACATGTTTACTC
TCAAAACTTCCTTTCCAACGAAAGTCTCTCATGTTTTTGCAAATTTTTCA
AGAATGTTGTTTTAGTGTCTTTTCTCGCGGAAACCGTTTTTTTTTGTAAG
CATAAAATTTGATTTGAACCACAAGGGTCGAAAGTCTTGTCCTTCTCAAA
TTTTAGTTTAGTACATCTGGCAAAGAATTTCAGCCAAAACTGCTTCAGAG
TCTTATTACCTTCTTAAAACTAAGGGGTATCATGAGTGTGTAAGAAAATT
GCATTTTAGGAAATATTTTGTATTTTTTCTAACTATAAACATAAAGTTAA
GTATGGAATTTAAAGTCAGGCACATAGTTGAGAATTTTTGATTTGTTTTC
GTCCGAATGTGGTTTAGATGTCTTTTGAACCTTTGGAAGTTGTTTTTGTG
TAGCGTTCTTAACATATTTAAAGTTGTTTTGATTAGTATAGACTTTTGAA
CTTTTAGGAGGAAAAGATTTTTAAGATCTAGCTATAAAGCCGACTCTCGT
TTATTCGAACTTCTAATATTCGAATATTTCTATAATTCGAACTTATTTCC
AGTCCCTGTCAAGGATAAACCCTTTCTGTCTTTCGAACAAATAAGATTCC
CCCATTCGAGTTCGAAATAGCAGGAGTCTACTTTCTAATTCCTTGTTGGA
AATCAGCCTCACTGTTGCCTTGAGACTCCAGTGCAAACTTTTAATCTACA
TTTCTCAAATATTTTCTAAGTAAACTTGTATTCATTACCATGAAGGTATC
GAGGACATCTATTTTTCGATACCCATCATTTATGCGAAGTATAAATGCCT
GTTTGAATAAGAAAATTCAAGAAAACGTAACTAAGTTTCTGTTAATCGGC
ACAATCGACATACATAGAGTCATTTTAAGGAAGGAAATCTTTTTTGTACT
TTCTCAAAAACATCTTTTGGATTAATTTCAAACTTTCAAATGCTCTGTTA
GTTCCGTAGAACTATTAGATTGAAATACATTTTTAGGATCGAGACTTAAT
CTAGAAGAGAGATGGAATCTTGTTTTATGATGGATCGGTTTGTTGGGACA
ATTAGTACTTCAAACTCTTTCTTTCAATACAATGTTCATTTCTATATTTC
TTCTTACAAAATAAATTCAACCAACTTTTTCAATTCTGTTTTATATTTTT
TCTGCAGATTAATGTGACCGACCGAACGTTAGAAGAAGTCGCCAAGATCA
TGCAAAGTTCACAAAAACTACTTCTCAAAACGAGATCCGCCCTACCCCTC
CCTATGAACGCCAGTCCTCTCATACGAAACTACACTAAAAAACAACAAAA
AGCTTCAGAGGACCCGAAGAATTATTCATCCCTAATGAAGATGGTATCCC
AAGAGGACCAATTGTCGGCCAAGAAAATGAACCGCACGATCAGCGATCCG
CACGATGATCAATCCTCAGGTAATCACACGCCTGTCACCAGAGAACGCTC
CGTCAGCCTTGATCATAAGGATAAAGTGTTCACGCGTGGACAAATGTATC
GAAATGGGCCAACCCGAAGTCCGGTGTATGACCGTAAGCTACCTGCTATC
CCAGACGAAAATACAGGAGGTGGTGGAAAAAGCCCCGAATCGGAAGGATA
TCATCGAGCTTTCTCACGCGCGTCGAGATACCAAGCTGAAAAGAAGCCAG
AGCCGAGTACGTTATGTCCAACGCAACCCAGCCATGTTGGAGCAAAATCA
CCTGGCTTGTTTCGTCGAAACGAGCGCAAGAAGAGCGGAGAGGGTATGTT
CACAGCGCCGTCAAATGACAGCTTATCGTCCATGTCGGATGATGAAAATG
CCGGCGACGAACGGCTTCACGTCTTTCCAAGTGACAACCCAACACCATCA
GACGGGTTAAAATCGTATACCGGTAAACTGGCCGTTTCGATTTATAAAAT
GATTGGAAGGTTGTCTGGAATCGAGGCTGATTGTTATTGTACGATTGAAG
TTGATGGCGAATCTAAAGCTTCAACCCAGCACCAAAAGATCAAAGAACTT
GTCAATTTTAATGAGAGTTTCGAAATCGAATTACAAAAAGCAACAGTGTT
GTCTTTCTTCATTTTTCATAAACACGGCAAGAAAAGTCACAAACTTGCCA
GCCAATCACATATTTATTTGGAAAACGTTTTAAGTCAAAGCGAGACTAAA
AAGAAACTGCTTCTTGGTACATCGAGTCATGTCCAAATGCGGATTAAGCT
TAATTTCACTGCGGCGGAGTCGTACACGCAACGCTCTCACTCGTTGAGGC
AGAACGGTGTATTCGGATTCAACTTAGCGAAAACGTTAGCTAAAGAGGAA
AATACGATCCCAGTTATCGTGCGAAAATGTGTGGAAGAGATCGAGAAACG
AGCTCTCGAGATTGTTGGAATTTATCGTATCAGTGGAAACGCGCGAAAGA
AGAAACACCTTCGTGCCCAGTTCGAGGAGAATAGCTTAGCGGTCGATACG
TCCAATGAGCATGAAGTTGATTGTCACGTGTTAGCTGGCATATTGAAAGA
TTATCTACGCGAGTTACCAAACCCGTTGATTTCGGATAATATGTATCATA
ACATCTATAATAAGGGTTGCGTTAAAAATAAAGACCAGAATAATTTGTTA
AGAGAATTGTTGAAAGAACTGCCTTATACGAATCGAGCTACGTTGATTTA
TATCATGGATCATTTAAAACGTGTCGCTGCTAAGAGTGAAGTTAATAAAA
TGACTCACCAAAATTTGGCAGTTTGTTTCGGTCCTGTAATGATGTCGTCG
CCCGTGGCAACAGCAGCCATGTTAGATTTTAAGAAACAGATTGACGCTCT
GGAGTTTTTGTTGAATATATGGCCTGTTAGTGTTGAACTTCAAAATGGGA
TTTAGTAGTTATTTTGGTAGTAGTTTTTGTAAATATTTTTCTTTTGAGGT
CTTCTTTCAATTTGAGTCGGAAATTATACGTAACATTTTAACTTAAAACT
GATTGAATTGAATGAATAGTCATAAAAACTTGGAATAAATAGACCTTGCT
TTACATATTAAAGGTCAAAGTTAATTTTTTATCGGTCATGCAATTTGAAA
AATCTGTCTAATTTACCGAAACTAAAGTCAATTCACTTTAAGTGTTCATA
TGTTCTTGCTTTCGAACCACTCTCATTTCAAGGGAATTTATCTGATTAGG
CTGATATGGTCTTCATTTATTAAAAAGAACTGAGAGTGCTTAAAGGGGAA
TGAACTTGGGTAGTAAATTTTATTTTGGTTGATACGGAGATCGATTTAAT
GTGAACCAAAAAAGTTTGGAAAAAAGAAGATTCTCTTTCTTCTCTTTCTT
GCGAAGATTCGTCAGGCACTTCTTATTATGTTAAATTGTATTTAAGATTT
TCTTTAAACCCTAAAAACGTTGTATGAATTATTTTTACGAGGCAAAAATT
TTTACGAAATTTATATGAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006938-exon-sc0000072-1575043694:378536..381925 | TCONS_00006938-exon-sc0000072-1575043694:378536..381925 | Clytia hemisphaerica | exon |
| TCONS_00006938-exon-sc0000072-1575043694:373003..375268 | TCONS_00006938-exon-sc0000072-1575043694:373003..375268 | Clytia hemisphaerica | exon |
| TCONS_00006938-exon-sc0000072-1510915933:378536..381925 | TCONS_00006938-exon-sc0000072-1510915933:378536..381925 | Clytia hemisphaerica | exon |
| TCONS_00006938-exon-sc0000072-1510915933:373003..375268 | TCONS_00006938-exon-sc0000072-1510915933:373003..375268 | Clytia hemisphaerica | exon |
| TCONS_00006938-exon-sc0000072-1491911889:378536..381925 | TCONS_00006938-exon-sc0000072-1491911889:378536..381925 | Clytia hemisphaerica | exon |
| TCONS_00006938-exon-sc0000072-1491911889:373003..375268 | TCONS_00006938-exon-sc0000072-1491911889:373003..375268 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072 | supercontig | sc0000072:373003..381925 - |
Blast
BLAST of TCONS_00006938 vs. Swiss-Prot (Human)
Match: SYDE2 (Rho GTPase-activating protein SYDE2 OS=Homo sapiens GN=SYDE2 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 3.240e-48 Identity = 114/332 (34.34%), Postives = 176/332 (53.01%), Query Frame = 1
Query: 4162 DCYCTIEVDGESKASTQHQKIKE-LVNFNESFEIELQKATVLSFFIF-HKHGKKSHKLASQSHIYLENVLSQSETKKKLLLGTSSHVQMRIKLNFTAAESYTQRSHSLRQNG---VFGFNLAKTLAKEEN--TIPVIVRKCVEEIEKRALEIVGIYRISGNARKKKHLRAQFEENSLAVDTSNEHEVDCHVLAGILKDYLRELPNPLISDNMYHNIYN-----------KGCVKNKDQNNLLRELLKELPYTNRATLIYIMDHLKRVAAKSEVNKMTHQNLAVCFGPVMMS---------SPVAT-----AAMLDFKKQIDALEFLLNIWPV 5061
D +C I+VD +KA T + ++ + +F IE++ A L +F + + +++ + L + ++T + L + I + T E + H L N +FG ++ K + KE +P++++KC+ EIEKR ++VG+YR+ G+A KK LR FE +S AV D +V+ G+LKDYLRELP+PLI+ +Y + + GC + + +LL LP +ATL ++DHLK VA+ EVNKMT QNLAVCFGPV++S + V T A+ LDFKK I+ L +LL +WPV
Sbjct: 701 DVFCAIQVDSVNKARTALLTCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNRVCCHGTVVLPTLFRVTKTHQ---LAVKLEPRGLIYVKVTLMEQWENSLHGLDINQEPIIFGVDIQKVVEKENIGLMVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSKAVGLCENQYPDINVITGVLKDYLRELPSPLITKQLYEAVLDAMAKSPLKMSSNGCENDPGDSKYTVDLLDCLPEIEKATLKMLLDHLKLVASYHEVNKMTCQNLAVCFGPVLLSQRQEPSTHNNRVFTDSEELASALDFKKHIEVLHYLLQLWPV 1029
The following BLAST results are available for this feature:
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