TCONS_00006856 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006856
Unique NameTCONS_00006856
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1379

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006856 ID=TCONS_00006856|Name=TCONS_00006856|organism=Clytia hemisphaerica|type=transcript|length=1379bp
GTAAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGGTTTAAATATG
ATCAACGTATTTGGTCAGTACCATTCAATACAATGCGAGTTTAACAAGTT
GACCATTATCATTCCCAAAGAGGAGTCCACAATCTTTcctgaaaatgata
tttctcAATACAATATCTCATGGAATGATCCTACTTGTGGGCCGAgtgaa
aaatccaatgaaacgcATTTGATCATGGTGGCTGATTATTCGTCTTGTGG
CACTGAAGCTGTGGACGATGAAAATGAAATCATCTTTAAAAATACGGTCC
ACATAGCAAAGCCTTCAACTTTATCATACACGAATCCAGGGCTAGAAACT
GTTGGCACCTTTGCAACATATAAAGTAATATGTATACTTCCAAAGATTAC
TCTGAATGTCACGTGGGCGTATGCAATCAATGTCATTGGTCAAGAGTCCT
TTCAGATGGTCGCTTCAGAGACAACTTCAAGCGGCAAGTTCACTGTTTCA
ATAAACCTCTATAAATCATCCGAATTCAATCAAAAGTTTACGTACCCGGC
TGTTCTGGATATGATCGATCGTTTCAATTTGGAAATCGAGCTTGAAAGTG
CTGCGGATTTATTTGTAGTTCCACAAAGTTGTTACGTGACACCTGGTGCT
GATCGTACTAaccttatcagggaaaataTTTTCACAGAAAGGTGCCATAA
TAATCATCATCACAGATTCAGATTACAACCGTCAGCTCAAAACACCAAGA
AATTCCGATTTTCATTAAATGCTTTCCGATTCAAAAACTCGAATGGTATG
GTCTACATTCATTGTTCAACACACATTTGTTTGAAAGGTAGTAACGATAC
AAAATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAAGATTCAAAGT
TTGTTGATGTTTTGagtaaagattacgtcattcGAACTGGATTGATTATC
GTTACATCATCATCGTTGTCAAACAATGAagAGGAAACAAAGCTCGCAAA
TCCATCACTCGACGCACACAAGAACGGAACAGTCTCACAGCAGAGCATTA
TCAGTCATACAAAATATACCAAGATTTTAATCATAACTGCTTCTTCATTT
GCGTTGTTTATATTTCTCGGTACTGTGGTTTTTGTATGTTATCGAAGAAG
CGCCAAAATGAGTAAAAGAAATGTCATGGTTACTGCTGATGATAAAAGAA
CAGAATAGCTTTTCGACTGAGCGCTGCAGATGACAAAGTCAAGACAATGA
AATTCAACTTCCATGGCTTGAATCGTTTAAATTTCATGAATTTCATAAAT
ATTGTACTTTgtctaattatttttttgtatttaatattaatttgatcaat
aaaaaatattatcTCAATATCTAAAAGTC
Run BLAST on NCBI

protein sequence of Secreted containing Zona pellucida domain protein

>TCONS_00006856-protein ID=TCONS_00006856-protein|Name=Secreted containing Zona pellucida domain protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
KMLKFLATFLVVGLNMINVFGQYHSIQCEFNKLTIIIPKEESTIFPENDI
SQYNISWNDPTCGPSEKSNETHLIMVADYSSCGTEAVDDENEIIFKNTVH
IAKPSTLSYTNPGLETVGTFATYKVICILPKITLNVTWAYAINVIGQESF
QMVASETTSSGKFTVSINLYKSSEFNQKFTYPAVLDMIDRFNLEIELESA
ADLFVVPQSCYVTPGADRTNLIRENIFTERCHNNHHHRFRLQPSAQNTKK
FRFSLNAFRFKNSNGMVYIHCSTHICLKGSNDTKCEFGCRRKRRSEDSKF
VDVLSKDYVIRTGLIIVTSSSLSNNEEETKLANPSLDAHKNGTVSQQSII
SHTKYTKILIITASSFALFIFLGTVVFVCYRRSAKMSKRNVMVTADDKRT
E
Run BLAST on NCBI

transcript from alignment at sc0000072:138652..144980+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006856 ID=TCONS_00006856|Name=TCONS_00006856|organism=Clytia hemisphaerica|type=transcript|length=6329bp|location=Sequence derived from alignment at sc0000072:138652..144980+ (Clytia hemisphaerica)
GTAAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGGTTTAAATATG
ATCAACGTATTTGGTAAGTATTACGTATAGATCTTCGTTAATTTTAtaat
tacatccctgtctcacaaccccagTACCCCGgttgaacttttttcttcag
tgaggataaaaatcccaatgggaatggaaattttattgttccaagtttAA
TAAATTCAGTGGAGATAGTTTTAGAGTGAAATGtttagacattgattttc
gagtggggatgatatcaaagtcgatttcccagtggggctgaaattccaga
gtattttcccactggggaccaaatttttgccaagttttccagtggggatg
gggtcctagtgggtctgtgatacaggggtgtataattTCTCGAATCTTTC
TGTAGATTCGGAGTAAAAAAACATACCTAGAGCTTGATCACTTTttgaat
tggaaattttttatGTTCTGCAGAAAGTGTTGATTGTagtgttatatttt
tttaatattgaagattaaagatgttttggaattttttaccggatttttga
caatttttacattttttgagaGTTTTAAAAAGTTTAGGGTTTTATTTTGG
AGTTTTGGAGTCTCatgttttttttgtgatttttttaggatttttggtat
ttttttggtattatttctttacattatgtaatagaaatattttcatattt
tgttggGGAAATTTGAGATATTTCCGAGATTCTGAAATTAATTTGTAATT
TATTCCTTTGTTTAAACAGTTTTGAGTGATTTGGGAAATAGGGCAtctaa
aatgtaaataaaaggCATTAAAAGAGGAAAgatctattttcaaaagatta
atTCCATTTCTAGACCTTTTTGTAAACACGATACCATTGTGACTTAAAGT
GGCGAAAATATTACGCAATGACAAATATATCCAATAAATCAAGTATAGCG
TCTCGATACTTCTTTAGGCGAACGCAACAGtctatacacctttttgaccg
tagccgccaattgccgcgtggacatttttgtccgttttaccagcCTAAAA
CCGtctcagtctttttttcgcacctatagacaatagaaaaaagtgtaaaa
aaaggattggataaAGTTCAGGGGGATAATCAAATGATAAAGTAGCGCGC
GTCTGACTGCGCGACTATGGctgaaaaggtgtattgcatAAATAATTACT
CCACACTTCAGTGGATGCAAGTAAAACAAGCAGGAAATTGAATATTATCT
ATAAATAAGTTTGTTCAAATTGGCACACTAACATTCTCCCGAATTACAAC
GCAATTACGTTGGAATCATCCCACGCGAAGTCCTATAAAATATTAGCTCG
AGTATTAGGGTTTTATTTCCGTAATACGGAGCTGCTGGAGAAATTTGATA
TGCTTTGGTCAATAGGTCGTCGCgttctcccaaacaactattGCTTAGTG
CTTTATTTTTTGCCTTTATTGGTGACTTATGTAACGTTTTGCCGCTAATT
CAAAATGAGAGCTTAATCCAAAACCTCTTTAACATATAGAATATTATCAT
TTTTAGGTCAGTACCATTCAATACAATGCGAGTTTAACAAGTTGACCATT
ATCATTCCCAAAGAGGAGTCCACAATCTTTcctgaaaatgatatttctcA
ATACAATATCTCATGGAATGATCCTACTTGTGGGCCGAgtgaaaaatcca
atgaaacgcATTTGATCATGGTGGCTGATTATTCGTCTTGTGGCACTGAA
GCTGTGGACGATGAAAATGAAATCATCTTTAAAAATACGGTATGTACTTC
TACAcgcttattttataagaacaagtaaattttggctcaagctaggctgt
tcttaattttttgaaattttcaggctttaatgctcttatgatgttcttag
tacgtttagtttttttacttaaaactgaagatgggtttaaaatctgttaa
aatcagcacttttttaataatttcggaaatctgaggctcagattgttctt
aatttgttctaaggttttgactaattttcagcctcgtgttttttataaaa
ttgttcttataaggaAATGCGAGTATGGGAGCAATGaatcaatgtaaaaa
atttctGGAAGAGCCGTATTCGAagcaaattaattttcaaagtgaagaag
ATAGGATATAATAGTTTTTATTGCATCAAATTTTGTCGAAACAAGTTCTG
CTCACCTTTTTTCGGACATACTGTAGGATGGCTACACTTTCTCATTCCCA
GGGTCACTTTACAGCCGAAAAAAAACATAGTGTACAAAAGTAGCAATTTT
TTAAGCGGTCACTCTCGAGGCCGTTTTGTGTTGTCCCGGaaggggggtac
ttaggcagaattaggtacggggacgtgccgctgatCAGGGTCTCTTTTTT
CAGAGTCTagagatatctgacagggtcccaaatttaccaaacattcgtAT
CTGAccgggtccatttttcaaactccaacggcacgtcggtcgtcaaggtc
agtgccgtATTTGCCGATGTCCGTggaaaaaacagcagaaaaattTGCCA
TGAAACGTTTCCCAAGGATAAAAAAGTCATCTAGCAGTACATTTACGTTT
CAAGCGAACGTACAAAAAATTCTTCCTTTATCAGGTCCACATAGCAAAGC
CTTCAACTTTATCATACACGAATCCAGGGCTAGAAACTGTTGGCACCTTT
GCAACATATAAAGTAATATGTATACTTCCAAAGATTACTCTGAATGTCAC
GTGGGCGTATGCAATCAATGTCATTGGTCAAGAGTCCTTTCAGATGGTCG
CTTCAGAGACAAGTAAGTGTGCTGTCCCGGACACTGAGCTCGATTACCGT
GCCTGAAAACTGCTATGCGAGACCGGGACTCCTAGCACCAGAGGGTAGAA
TattagatttataaagcccgaagggctagatgtcgtgcttttgcTGGAAA
GTATGCCGTGGTTAGGGAGGGAGGAAATCTTACCTAGGTTACATgacatt
acaataaaatttcagcgcttgacaaATAAGAAGCtttgcgggttttcgaa
aacaatggcagcaatatttttgcgatattcacttttttttgcttggaaga
ccTTAAAGCACGATATCTGGCCCTTCAGGCTTTACAAAAATCTGTGGTTA
GAATCCATCATTTTGACCACGTTCGAAAGATGACgatgatggtgatgatg
atgGGCGGAAGAGTGTTTCTCCTATAATTTTTGGTATCTTAAAGTTTGCT
CAAATAAACCCTGTCTCGCAGCTCCGTTGGAGCTTCTTCCCACAGTTGAA
TTTTTTATGGAGATCTCaacggggatagaaattttattgttcccaGGTGG
GAATGGTTTTTGAGTTCAATTTCTTGCCGATTTTGAATTGGGATGAAAAC
AAATCAATTTTCTAGGGGGGGGGAGGGCTGAAACTGCAGGGTATCTTTCC
CaccaggaaagaaattttgaccTAATCTTCAAGTGGGTAGGGGGTCCTCC
CCTGGTCTCTGATGCAGGGGTGTCAAAGTCCATCGTTTCCAAAAGAATCT
ACATCATATTTTACCAGAATTTAACCAGAGTTTTTTACAGTAAATAACTt
attttttggttaaaattattcCCTTCTTTGAAAATCAATAATCCTTTAAA
TCCCTTAAACAGTATTTTTCTATTCCCAGCTTCAAGCGGCAAGTTCACTG
TTTCAATAAACCTCTATAAATCATCCGAATTCAATCAAAAGTTTACGTAC
CCGGCTGTTCTGGATATGATCGATCGTTTCAATTTGGAAATCGAGCTTGA
AAGTGCTGCGGATTTATTTGTAGTTCCACAAAGTTGTTACGTGACACCTG
GTGCTGATCGTACTAaccttatcagggaaaataTTTTCACAGAAAGGTAT
ATCTACCTGATCGGCTCTTTTTATACCAGTCCTCATTTAGCTCCAGCTCC
AGCTCCAGCTTGAATTTTCCATCTTAGCCCGGCTCTTTTAATTTTGATCc
cttacaccggcccttattacgcctgCGACGAAAAAAATAGCGATCATGTa
tgtgtaaaaagggccgataaggtagttgcTACATCTGTTCAATAATGAGC
AGGACCATTAGTTACGGcattattaattatttttctttgaatctTTTTCA
GGTGCCATAATAATCATCATCACAGATTCAGATTACAACCGTCAGCTCAA
AACACCAAGAAATTCCGATTTTCATTAAATGCTTTCCGATTCAAAAACTC
GAATGGTATGGTCTACATTCATTGTTCAACACACATTTGTTTGAAAGGTA
GTAACGATACAAAATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAA
GATTCAAAGTTTGTTGATGTTTTGagtaaagattacgtcattcGAACTGG
ATTGATTATCGTTACATCATCATCGTTGTCAAACAATGAaggtaaaaata
ttaaaaaataaatataaatattgtaGTATAGTCCCAAGTTTTAACGAAAA
TGCACAGTAATTCATTACCTCAAATCATGGATGAGCCAATTGGAGCCCAC
AAACTGCGCATGCGTTCTTTTAAACCGTTAGTGGTTAAATAGCGTAAAGA
GTTAAGGGAAATGAATCGCTAGgcgtggtacagtcactttcagtcggggt
tgtggatggtaAATTATGTCGTTCTTTATTgtcgttttttcgtttttagt
cGTTTTTTGTCGTTTATATTCATTTCTCGTTTTTTCTTCGTTCTTTCATA
GTCTCTTTATGGTGGTCTCGTTTTAGCACTTCCACACCCTCATAAATTAA
AAGGAAAGTTGGTTCTTCACTGCTTCCCTTCAAGCTGACTCCTTTCTTCG
AAGGTTTGATAAGAAAGTGACGTATCAGTTCGTTCTCTAAATTGATTTTC
GCTAAAAGAGAGAATATTGgaagttttctttaaagaatataGGAAAGGTT
GGGATAATAATTTGGgttgggataaatttgaaaagagAGGTAAGCCTGAA
GGTAAGTAAGCAGTGACAAAGTTGTTAACTGTGTTTACCGTTTTTTTCGT
AACTCTACCGCTGCTATTTTTCCGTAGCCGCAAATAGCGGCGTGAAACTT
CGCGTTTACATTTTCCTGCGTTTACCtccatttaagggctctgaccatag
tcagaaaattgattttagtatctgaaacataaaagttatgttttagattc
tttaacacttttaacaaagaattgcctttataNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNtccagatgaaaaattgatgaaaaaccactattttgaagatt
tcgagacaaagaagcatttacaaaaattttccgcaaaattttttattgtt
tggtaaaagatacaccatttaCTGCGNNNatgtataacatgccatagttt
tgttggttacatcagtcagaaaacacattttaaacacggcaattatgaaa
aattcactatggtcagagcccttaacacATATTAGCATTTTCTTTCGAAA
GTCTCATAATTTatgaattttcctaaaataAAGCTAGCTcctttttttcg
gacacactgTAATAATGTAATACTATTTTAGAGGAAACAAAGCTCGCAAA
TCCATCACTCGACGCACACAAGAACGGAACAGTCTCACAGCAGAGCATTA
TCAGTCATACAAAATATACCAAGATTTTAATCATAACTGCTTCTTCATTT
GCGTTGTTTATATTTCTCGGTACTGTGGTTTTTGTATGTTATCGAAGAAG
CGCCAAAATGAGTAAAAGAAATGTCATGGTTACTGCTGATGATAAAAGAA
CAGAATAGCTTTTCGACTGAGCGCTGCAGATGACAAAGTCAAGACAATGA
AATTCAACTTCCATGGCTTGAATCGTTTAAATTTCATGAATTTCATAAAT
ATTGTACTTTgtctaattatttttttgtatttaatattaatttgatcaat
aaaaaatattatcTCAATATCTAAAAGTC

Coding sequence (CDS) from alignment at sc0000072:138652..144980+

>TCONS_00006856 ID=TCONS_00006856|Name=TCONS_00006856|organism=Clytia hemisphaerica|type=CDS|length=7236bp|location=Sequence derived from alignment at sc0000072:138652..144980+ (Clytia hemisphaerica)
AAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGGTTTAAATATGAT
CAACGTATTTGGTCAGTACCATTCAATACAATGCGAGTTTAACAAGTTGA
CCATTATCATTCCCAAAGAGGAGTCCACAATCTTTcctgaaaatgatatt
tctcAATACAATATCTCATGGAATGATCCTACTTGTGGGCCGAgtgaaaa
atccaatgaaacgcATTTGATCATGGTGGCTGATTATTCGTCTTGTGGCA
CTGAAGCTGTGGACGATGAAAATGAAATCATCTTTAAAAATACGGTCCAC
ATAGCAAAGCCTTCAACTTTATCATACACGAATCCAGGGCTAGAAACTGT
TGGCACCTTTGCAACATATAAAGTAATATGTATACTTCCAAAGATTACTC
TGAATGTCACGTGGGCGTATGCAATCAATGTCATTGGTCAAGAGTCCTTT
CAGATGGTCGCTTCAGAGACAACTTCAAGCGGCAAGTTCACTGTTTCAAT
AAACCTCTATAAATCATCCGAATTCAATCAAAAGTTTACGTACCCGGCTG
TTCTGGATATGATCGATCGTTTCAATTTGGAAATCGAGCTTGAAAGTGCT
GCGGATTTATTTGTAGTTCCACAAAGTTGTTACGTGACACCTGGTGCTGA
TCGTACTAaccttatcagggaaaataTTTTCACAGAAAGGTGCCATAATA
ATCATCATCACAGATTCAGATTACAACCGTCAGCTCAAAACACCAAGAAA
TTCCGATTTTCATTAAATGCTTTCCGATTCAAAAACTCGAATGGTATGGT
CTACATTCATTGTTCAACACACATTTGTTTGAAAGGTAGTAACGATACAA
AATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAAGATTCAAAGTTT
GTTGATGTTTTGagtaaagattacgtcattcGAACTGGATTGATTATCGT
TACATCATCATCGTTGTCAAACAATGAagAGGAAACAAAGCTCGCAAATC
CATCACTCGACGCACACAAGAACGGAACAGTCTCACAGCAGAGCATTATC
AGTCATACAAAATATACCAAGATTTTAATCATAACTGCTTCTTCATTTGC
GTTGTTTATATTTCTCGGTACTGTGGTTTTTGTATGTTATCGAAGAAGCG
CCAAAATGAGTAAAAGAAATGTCATGGTTACTGCTGATGATAAAAGAACA
GAATAGAAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGGTTTAAA
TATGATCAACGTATTTGGTCAGTACCATTCAATACAATGCGAGTTTAACA
AGTTGACCATTATCATTCCCAAAGAGGAGTCCACAATCTTTcctgaaaat
gatatttctcAATACAATATCTCATGGAATGATCCTACTTGTGGGCCGAg
tgaaaaatccaatgaaacgcATTTGATCATGGTGGCTGATTATTCGTCTT
GTGGCACTGAAGCTGTGGACGATGAAAATGAAATCATCTTTAAAAATACG
GTCCACATAGCAAAGCCTTCAACTTTATCATACACGAATCCAGGGCTAGA
AACTGTTGGCACCTTTGCAACATATAAAGTAATATGTATACTTCCAAAGA
TTACTCTGAATGTCACGTGGGCGTATGCAATCAATGTCATTGGTCAAGAG
TCCTTTCAGATGGTCGCTTCAGAGACAACTTCAAGCGGCAAGTTCACTGT
TTCAATAAACCTCTATAAATCATCCGAATTCAATCAAAAGTTTACGTACC
CGGCTGTTCTGGATATGATCGATCGTTTCAATTTGGAAATCGAGCTTGAA
AGTGCTGCGGATTTATTTGTAGTTCCACAAAGTTGTTACGTGACACCTGG
TGCTGATCGTACTAaccttatcagggaaaataTTTTCACAGAAAGGTGCC
ATAATAATCATCATCACAGATTCAGATTACAACCGTCAGCTCAAAACACC
AAGAAATTCCGATTTTCATTAAATGCTTTCCGATTCAAAAACTCGAATGG
TATGGTCTACATTCATTGTTCAACACACATTTGTTTGAAAGGTAGTAACG
ATACAAAATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAAGATTCA
AAGTTTGTTGATGTTTTGagtaaagattacgtcattcGAACTGGATTGAT
TATCGTTACATCATCATCGTTGTCAAACAATGAagAGGAAACAAAGCTCG
CAAATCCATCACTCGACGCACACAAGAACGGAACAGTCTCACAGCAGAGC
ATTATCAGTCATACAAAATATACCAAGATTTTAATCATAACTGCTTCTTC
ATTTGCGTTGTTTATATTTCTCGGTACTGTGGTTTTTGTATGTTATCGAA
GAAGCGCCAAAATGAGTAAAAGAAATGTCATGGTTACTGCTGATGATAAA
AGAACAGAATAGAAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGG
TTTAAATATGATCAACGTATTTGGTCAGTACCATTCAATACAATGCGAGT
TTAACAAGTTGACCATTATCATTCCCAAAGAGGAGTCCACAATCTTTcct
gaaaatgatatttctcAATACAATATCTCATGGAATGATCCTACTTGTGG
GCCGAgtgaaaaatccaatgaaacgcATTTGATCATGGTGGCTGATTATT
CGTCTTGTGGCACTGAAGCTGTGGACGATGAAAATGAAATCATCTTTAAA
AATACGGTCCACATAGCAAAGCCTTCAACTTTATCATACACGAATCCAGG
GCTAGAAACTGTTGGCACCTTTGCAACATATAAAGTAATATGTATACTTC
CAAAGATTACTCTGAATGTCACGTGGGCGTATGCAATCAATGTCATTGGT
CAAGAGTCCTTTCAGATGGTCGCTTCAGAGACAACTTCAAGCGGCAAGTT
CACTGTTTCAATAAACCTCTATAAATCATCCGAATTCAATCAAAAGTTTA
CGTACCCGGCTGTTCTGGATATGATCGATCGTTTCAATTTGGAAATCGAG
CTTGAAAGTGCTGCGGATTTATTTGTAGTTCCACAAAGTTGTTACGTGAC
ACCTGGTGCTGATCGTACTAaccttatcagggaaaataTTTTCACAGAAA
GGTGCCATAATAATCATCATCACAGATTCAGATTACAACCGTCAGCTCAA
AACACCAAGAAATTCCGATTTTCATTAAATGCTTTCCGATTCAAAAACTC
GAATGGTATGGTCTACATTCATTGTTCAACACACATTTGTTTGAAAGGTA
GTAACGATACAAAATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAA
GATTCAAAGTTTGTTGATGTTTTGagtaaagattacgtcattcGAACTGG
ATTGATTATCGTTACATCATCATCGTTGTCAAACAATGAagAGGAAACAA
AGCTCGCAAATCCATCACTCGACGCACACAAGAACGGAACAGTCTCACAG
CAGAGCATTATCAGTCATACAAAATATACCAAGATTTTAATCATAACTGC
TTCTTCATTTGCGTTGTTTATATTTCTCGGTACTGTGGTTTTTGTATGTT
ATCGAAGAAGCGCCAAAATGAGTAAAAGAAATGTCATGGTTACTGCTGAT
GATAAAAGAACAGAATAGAAGATGTTGAAATTTCTCGCTACATTTTTGGT
GGTTGGTTTAAATATGATCAACGTATTTGGTCAGTACCATTCAATACAAT
GCGAGTTTAACAAGTTGACCATTATCATTCCCAAAGAGGAGTCCACAATC
TTTcctgaaaatgatatttctcAATACAATATCTCATGGAATGATCCTAC
TTGTGGGCCGAgtgaaaaatccaatgaaacgcATTTGATCATGGTGGCTG
ATTATTCGTCTTGTGGCACTGAAGCTGTGGACGATGAAAATGAAATCATC
TTTAAAAATACGGTCCACATAGCAAAGCCTTCAACTTTATCATACACGAA
TCCAGGGCTAGAAACTGTTGGCACCTTTGCAACATATAAAGTAATATGTA
TACTTCCAAAGATTACTCTGAATGTCACGTGGGCGTATGCAATCAATGTC
ATTGGTCAAGAGTCCTTTCAGATGGTCGCTTCAGAGACAACTTCAAGCGG
CAAGTTCACTGTTTCAATAAACCTCTATAAATCATCCGAATTCAATCAAA
AGTTTACGTACCCGGCTGTTCTGGATATGATCGATCGTTTCAATTTGGAA
ATCGAGCTTGAAAGTGCTGCGGATTTATTTGTAGTTCCACAAAGTTGTTA
CGTGACACCTGGTGCTGATCGTACTAaccttatcagggaaaataTTTTCA
CAGAAAGGTGCCATAATAATCATCATCACAGATTCAGATTACAACCGTCA
GCTCAAAACACCAAGAAATTCCGATTTTCATTAAATGCTTTCCGATTCAA
AAACTCGAATGGTATGGTCTACATTCATTGTTCAACACACATTTGTTTGA
AAGGTAGTAACGATACAAAATGCGAATTTGGATGTAGACGGAAAAGACGA
TCTGAAGATTCAAAGTTTGTTGATGTTTTGagtaaagattacgtcattcG
AACTGGATTGATTATCGTTACATCATCATCGTTGTCAAACAATGAagAGG
AAACAAAGCTCGCAAATCCATCACTCGACGCACACAAGAACGGAACAGTC
TCACAGCAGAGCATTATCAGTCATACAAAATATACCAAGATTTTAATCAT
AACTGCTTCTTCATTTGCGTTGTTTATATTTCTCGGTACTGTGGTTTTTG
TATGTTATCGAAGAAGCGCCAAAATGAGTAAAAGAAATGTCATGGTTACT
GCTGATGATAAAAGAACAGAATAGAAGATGTTGAAATTTCTCGCTACATT
TTTGGTGGTTGGTTTAAATATGATCAACGTATTTGGTCAGTACCATTCAA
TACAATGCGAGTTTAACAAGTTGACCATTATCATTCCCAAAGAGGAGTCC
ACAATCTTTcctgaaaatgatatttctcAATACAATATCTCATGGAATGA
TCCTACTTGTGGGCCGAgtgaaaaatccaatgaaacgcATTTGATCATGG
TGGCTGATTATTCGTCTTGTGGCACTGAAGCTGTGGACGATGAAAATGAA
ATCATCTTTAAAAATACGGTCCACATAGCAAAGCCTTCAACTTTATCATA
CACGAATCCAGGGCTAGAAACTGTTGGCACCTTTGCAACATATAAAGTAA
TATGTATACTTCCAAAGATTACTCTGAATGTCACGTGGGCGTATGCAATC
AATGTCATTGGTCAAGAGTCCTTTCAGATGGTCGCTTCAGAGACAACTTC
AAGCGGCAAGTTCACTGTTTCAATAAACCTCTATAAATCATCCGAATTCA
ATCAAAAGTTTACGTACCCGGCTGTTCTGGATATGATCGATCGTTTCAAT
TTGGAAATCGAGCTTGAAAGTGCTGCGGATTTATTTGTAGTTCCACAAAG
TTGTTACGTGACACCTGGTGCTGATCGTACTAaccttatcagggaaaata
TTTTCACAGAAAGGTGCCATAATAATCATCATCACAGATTCAGATTACAA
CCGTCAGCTCAAAACACCAAGAAATTCCGATTTTCATTAAATGCTTTCCG
ATTCAAAAACTCGAATGGTATGGTCTACATTCATTGTTCAACACACATTT
GTTTGAAAGGTAGTAACGATACAAAATGCGAATTTGGATGTAGACGGAAA
AGACGATCTGAAGATTCAAAGTTTGTTGATGTTTTGagtaaagattacgt
cattcGAACTGGATTGATTATCGTTACATCATCATCGTTGTCAAACAATG
AagAGGAAACAAAGCTCGCAAATCCATCACTCGACGCACACAAGAACGGA
ACAGTCTCACAGCAGAGCATTATCAGTCATACAAAATATACCAAGATTTT
AATCATAACTGCTTCTTCATTTGCGTTGTTTATATTTCTCGGTACTGTGG
TTTTTGTATGTTATCGAAGAAGCGCCAAAATGAGTAAAAGAAATGTCATG
GTTACTGCTGATGATAAAAGAACAGAATAGAAGATGTTGAAATTTCTCGC
TACATTTTTGGTGGTTGGTTTAAATATGATCAACGTATTTGGTCAGTACC
ATTCAATACAATGCGAGTTTAACAAGTTGACCATTATCATTCCCAAAGAG
GAGTCCACAATCTTTcctgaaaatgatatttctcAATACAATATCTCATG
GAATGATCCTACTTGTGGGCCGAgtgaaaaatccaatgaaacgcATTTGA
TCATGGTGGCTGATTATTCGTCTTGTGGCACTGAAGCTGTGGACGATGAA
AATGAAATCATCTTTAAAAATACGGTCCACATAGCAAAGCCTTCAACTTT
ATCATACACGAATCCAGGGCTAGAAACTGTTGGCACCTTTGCAACATATA
AAGTAATATGTATACTTCCAAAGATTACTCTGAATGTCACGTGGGCGTAT
GCAATCAATGTCATTGGTCAAGAGTCCTTTCAGATGGTCGCTTCAGAGAC
AACTTCAAGCGGCAAGTTCACTGTTTCAATAAACCTCTATAAATCATCCG
AATTCAATCAAAAGTTTACGTACCCGGCTGTTCTGGATATGATCGATCGT
TTCAATTTGGAAATCGAGCTTGAAAGTGCTGCGGATTTATTTGTAGTTCC
ACAAAGTTGTTACGTGACACCTGGTGCTGATCGTACTAaccttatcaggg
aaaataTTTTCACAGAAAGGTGCCATAATAATCATCATCACAGATTCAGA
TTACAACCGTCAGCTCAAAACACCAAGAAATTCCGATTTTCATTAAATGC
TTTCCGATTCAAAAACTCGAATGGTATGGTCTACATTCATTGTTCAACAC
ACATTTGTTTGAAAGGTAGTAACGATACAAAATGCGAATTTGGATGTAGA
CGGAAAAGACGATCTGAAGATTCAAAGTTTGTTGATGTTTTGagtaaaga
ttacgtcattcGAACTGGATTGATTATCGTTACATCATCATCGTTGTCAA
ACAATGAagAGGAAACAAAGCTCGCAAATCCATCACTCGACGCACACAAG
AACGGAACAGTCTCACAGCAGAGCATTATCAGTCATACAAAATATACCAA
GATTTTAATCATAACTGCTTCTTCATTTGCGTTGTTTATATTTCTCGGTA
CTGTGGTTTTTGTATGTTATCGAAGAAGCGCCAAAATGAGTAAAAGAAAT
GTCATGGTTACTGCTGATGATAAAAGAACAGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003850XLOC_003850Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Secreted containing Zona pellucida domain proteinTCONS_00006856-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006856-exon-sc0000072-1491911889:138652..138714TCONS_00006856-exon-sc0000072-1491911889:138652..138714Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1510915933:138652..138714TCONS_00006856-exon-sc0000072-1510915933:138652..138714Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1575043694:138652..138714TCONS_00006856-exon-sc0000072-1575043694:138652..138714Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1491911889:140208..140440TCONS_00006856-exon-sc0000072-1491911889:140208..140440Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1510915933:140208..140440TCONS_00006856-exon-sc0000072-1510915933:140208..140440Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1575043694:140208..140440TCONS_00006856-exon-sc0000072-1575043694:140208..140440Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1491911889:141286..141463TCONS_00006856-exon-sc0000072-1491911889:141286..141463Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1510915933:141286..141463TCONS_00006856-exon-sc0000072-1510915933:141286..141463Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1575043694:141286..141463TCONS_00006856-exon-sc0000072-1575043694:141286..141463Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1491911889:142331..142547TCONS_00006856-exon-sc0000072-1491911889:142331..142547Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1510915933:142331..142547TCONS_00006856-exon-sc0000072-1510915933:142331..142547Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1575043694:142331..142547TCONS_00006856-exon-sc0000072-1575043694:142331..142547Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1491911889:142803..143092TCONS_00006856-exon-sc0000072-1491911889:142803..143092Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1510915933:142803..143092TCONS_00006856-exon-sc0000072-1510915933:142803..143092Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1575043694:142803..143092TCONS_00006856-exon-sc0000072-1575043694:142803..143092Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1491911889:144583..144980TCONS_00006856-exon-sc0000072-1491911889:144583..144980Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1510915933:144583..144980TCONS_00006856-exon-sc0000072-1510915933:144583..144980Clytia hemisphaericaexon
TCONS_00006856-exon-sc0000072-1575043694:144583..144980TCONS_00006856-exon-sc0000072-1575043694:144583..144980Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:138652..144980 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
198.261	198.122	194.377	185.788	6.81998	5.76658	0.400717	0.625592	0.158648	1.15925	0	0.0873443	0	0	0	0	0	0.0735794	0	0	0.0776493	0.325284	54.1971	45.9425	0.0976689	0.0871672	2.97483	3.52246	21.5599	27.5109
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006856 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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