TCONS_00006832 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006832
Unique NameTCONS_00006832
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length431

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006832 ID=TCONS_00006832|Name=TCONS_00006832|organism=Clytia hemisphaerica|type=transcript|length=431bp
aataataataataataataataacgatATATTTCACAGTATCTCCAAAGT
TTTACAATTGGCTCTTCACCTGGAAATTGAGTATGATAAATATATATGTA
GCGtataaaaaatatgattttcattaaaaatactGAGACCGGTTGTAACT
AGAGACTAgaagtttgttattttttgttctcCTTGGAGACAGATGGACTG
TATTCCATGAATTAAGCTTTGCAGGAAAATTCTATCACCAAGTAAGAGTG
TGAAGTATTTGGGTGTTCACCTTGACAATCATCTAAACTGGAAAAGTTCA
TACTTCTTTCGTTGCTGCTAAATTAAgaagggcaaatggggcaatatcca
aactccgtcactatgttccaattcacatccttctaaacatttatcatgca
atttttgcttCTCATGTTCGCTATGCTAGTC
Run BLAST on NCBI

transcript from alignment at sc0000070:487691..488121

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006832 ID=TCONS_00006832|Name=TCONS_00006832|organism=Clytia hemisphaerica|type=transcript|length=431bp|location=Sequence derived from alignment at sc0000070:487691..488121 (Clytia hemisphaerica)
GACTAGCATAGCGAACATGAGaagcaaaaattgcatgataaatgtttaga
aggatgtgaattggaacatagtgacggagtttggatattgccccatttgc
ccttcTTAATTTAGCAGCAACGAAAGAAGTATGAACTTTTCCAGTTTAGA
TGATTGTCAAGGTGAACACCCAAATACTTCACACTCTTACTTGGTGATAG
AATTTTCCTGCAAAGCTTAATTCATGGAATACAGTCCATCTGTCTCCAAG
gagaacaaaaaataacaaacttcTAGTCTCTAGTTACAACCGGTCTCagt
atttttaatgaaaatcatattttttataCGCTACATATATATTTATCATA
CTCAATTTCCAGGTGAAGAGCCAATTGTAAAACTTTGGAGATACTGTGAA
ATATatcgttattattattattattattatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003831XLOC_003831Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006832-exon-sc0000070-1491911889:487691..488121TCONS_00006832-exon-sc0000070-1491911889:487691..488121Clytia hemisphaericaexon
TCONS_00006832-exon-sc0000070-1510915933:487691..488121TCONS_00006832-exon-sc0000070-1510915933:487691..488121Clytia hemisphaericaexon
TCONS_00006832-exon-sc0000070-1575043694:487691..488121TCONS_00006832-exon-sc0000070-1575043694:487691..488121Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:487691..488121 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.366263	0.473457	0	0.610024	4.47898	2.67565	5.37713	4.50767	0.327651	0	0.489604	0.479777	2.36171	1.16913	0.744431	0.897774	0.548161	1.82888	0.685971	2.27806	2.398	2.10986	0.51946	1.43011	1.76276	0.543765	2.95253	1.06688	3.65737	1.40474
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006832 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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