|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006771 ID=TCONS_00006771|Name=TCONS_00006771|organism=Clytia hemisphaerica|type=transcript|length=462bp
cattgaagagtcattttgctatatttctcatcatttttcactgaaatttc
atttgtctacaaccttttgtccagcattgtgcATCTACCATAGTCAAGGT
CCAGCTCTTATTTTATGTTTATTGTTTAGACTTTTGACGTCGAAGATTCC
CAAATTAATCATTCAAGATGAATAAAGCAATTGTCTGCATCTTGGCTATT
GCCTTGGTTTTCAATGTTGGTTATTCCGAGGCTGGTTGCTCTGGTTTCAT
GGGAGGCCGTATTGCTGAGGGACAAATCATCAGTTCTGCAATTGGATGTT
TTCAATGTCGAGGAAGTTCTTTAGAGAATGCCAGTTGCAAGAGAACTGCC
AACCGACGTAAACGTGAATACGTCGCATACGACGACGCCGTTGATAGTGA
AGCTGACTTGTATGATCACCAAAATTATTTCTTCTAAAATTATTGCATTC
ATTATATCTTAT Run BLAST on NCBI transcript from alignment at sc0000070:49407..50496- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006771 ID=TCONS_00006771|Name=TCONS_00006771|organism=Clytia hemisphaerica|type=transcript|length=1090bp|location=Sequence derived from alignment at sc0000070:49407..50496- (Clytia hemisphaerica)
CATTGAAGAGTCATTTTGCTATATTTCTCATCATTTTTCACTGAAATTTC
ATTTGTCTACAACCTTTTGTCCAGCATTGTGCATCTACCATAGTCAAGGT
CCAGCTCTTATTTTATGTTTATTGTTTAGACTTTTGACGTCGAAGATTCC
CAAATTAATCATTCAAGATGAATAAAGCAATTGTCTGCATCTTGGCTATT
GCCTTGGTTTTCAATGTTGGTTATTCCGAGGCTGGTTGCTCTGGTTTCAT
GGGTAAAACTACTTAAAATTGTTTAACTGACCCCTGTCTCATAGCCCCGG
CGGAGTCTTTTCTTATAGTGGGAATAAAAGTTGCTATCGAAATCCCCGTA
AAAATGATTTTGGGGTGCAGTTTTTATGTTTCCTTTGAATTTCAAATCGG
AATGAAACCAAAGCCAATTACCTGGGCGGAAATTGTATTGGTGGGTATTT
TTCCTAACGAGAAAGAGTTTAATCTGAGGCTCAACTTCATAATCTAGGCT
TTCTATGTTCGAATTTTCCCTCCTACTGGAGTTGACTAACCGACCCAGTG
ACGACTTTTAACCCTTGGACCTTAACCGGGACTAAAAAGGAGAAAACAAA
GGAAAATTTTGTGAATTTTACGACTCTTATTGCATTGGGACAAATTGGAC
CAAATTTCGATCTTTCCGGGGGTAAAAAGTTGAAATTTTCCTATTTTTCC
GACTCTTAGTGAGAGTTTTTTCGGTGACTTTTTCGACCCTTAGCGGGACT
TTGGAAATCCAAATAAGGTACCCGTAAGGGTGGCACATACCGTACCCTCC
ATTTCCCTAAGTACCTCCCTGGATTGTATTCAACCGTGGAGAGGAGAATA
AAAACTCTTTATACTTCATCCATATTTTAGGAGGCCGTATTGCTGAGGGA
CAAATCATCAGTTCTGCAATTGGATGTTTTCAATGTCGAGGAAGTTCTTT
AGAGAATGCCAGTTGCAAGAGAACTGCCAACCGACGTAAACGTGAATACG
TCGCATACGACGACGCCGTTGATAGTGAAGCTGACTTGTATGATCACCAA
AATTATTTCTTCTAAAATTATTGCATTCATTATATCTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006771-exon-sc0000070-1575043694:50245..50496 | TCONS_00006771-exon-sc0000070-1575043694:50245..50496 | Clytia hemisphaerica | exon |
| TCONS_00006771-exon-sc0000070-1575043694:49407..49616 | TCONS_00006771-exon-sc0000070-1575043694:49407..49616 | Clytia hemisphaerica | exon |
| TCONS_00006771-exon-sc0000070-1510915933:50245..50496 | TCONS_00006771-exon-sc0000070-1510915933:50245..50496 | Clytia hemisphaerica | exon |
| TCONS_00006771-exon-sc0000070-1510915933:49407..49616 | TCONS_00006771-exon-sc0000070-1510915933:49407..49616 | Clytia hemisphaerica | exon |
| TCONS_00006771-exon-sc0000070-1491911889:50245..50496 | TCONS_00006771-exon-sc0000070-1491911889:50245..50496 | Clytia hemisphaerica | exon |
| TCONS_00006771-exon-sc0000070-1491911889:49407..49616 | TCONS_00006771-exon-sc0000070-1491911889:49407..49616 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:49407..50496 - |
Blast
The following BLAST results are available for this feature:
|
