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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006765 ID=TCONS_00006765|Name=TCONS_00006765|organism=Clytia hemisphaerica|type=transcript|length=1017bp
AGCCAAAAGGGAGTGGAATAATTAAGTATCAAGATGTTAGCGAGTTTGAG
GATTTCATCTCTGCGTCGAACAGCGAAATTTATTGgTATACGTTTACTTT
CGTCTACGTATCAACGTCATATATTAACGGACGAGCAAGTGGAAGCGTAT
CAACGTGACAGTTACGTCATTTTACGTGATCTTCTAACGCCGGAAGAGAA
GAAAGATTTTCAACGTATCGCcactgaaattgaaaattggcCAATCAGCG
ATGACTGGTTTTCCTATTTTGAAGAAGTAGGCGGTGTGAGGCGTTTGTCA
AGATTAGAAGGCTTCTACAACCACCACGCTGACTTAAAAAAACATGTCAA
GGGCAAGTTAGGTCAAGCTGCTTCCGATTTAATAGGCGAGGAAGCAatac
ttttcaaagaaaaactaaacATGAAATACCCTGGTGGTTTTGGTTATGAC
CCACACCAAGATGGAGTTGGCTCTTGGAattattttggtcaatttttcca
cATGTCAGCTGTGGTCACTTGTGATCCAATGACTATTGAGAATGGTTGTC
TACAAGTGGTTCCTGGAGACTGGGGGGAATTACCATGGTTACCAATGGAT
ATCAATGGTGATATTACAGAGGAAGTTGCGAAAGGGTTGGATTGGAAACA
CATGATTTGTGATGCTGGAACTGTCATCATGTTTAATTCTCATGTCCCTC
ATAAATCAGATGTCAATCAAACGGACCAATCACGACGCGCCTTTTTTATC
ACGTGGAATGGTGAATCGTTGGGTGATACTCGGCAAAAATATTATGATTT
GAGACGTGAATGTCATCCACCAGATCATTTGAGAGATCCAAATAAAGATT
ATACAGAATTGATTAGAATCTTTAATGAACATAATTTAGAACAATCGAAT
GACAGATGGCAACCAGATttagaagaagaaacaaaatgattaaattttaC
TTTGGAAGTGTGTAACTTTAAATGTAAAGAAGCCatgaaaaatcaataaa
atttgtttaaaaacgCT Run BLAST on NCBI transcript from alignment at sc0000070:556540..557799+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006765 ID=TCONS_00006765|Name=TCONS_00006765|organism=Clytia hemisphaerica|type=transcript|length=1260bp|location=Sequence derived from alignment at sc0000070:556540..557799+ (Clytia hemisphaerica)
AGCCAAAAGGGAGTGGAATAATTAAGTATCAAGATGTTAGCGAGTTTGAG
GATTTCATCTCTGCGTCGAACAGCGAAATTTATTGGTAAAAATGGTTCTT
TTGATTTCATTGttgaaaaatttactcatttgcACTCGATACAACTTATT
CGTTAAACTCTCTAGGCTACGTTAACTTTTATGGACAACTTTAAATGAGA
AATCAGAAATCATAGTTTTAATTAAATACGGAAAAAGCCAAATGGGTCTC
ATTGGGGGAACTTTGAATTTACTAGAATTACAGTAATGTACGTAAACGTC
ATAATATAGAGtacgttttattttttaggTATACGTTTACTTTCGTCTAC
GTATCAACGTCATATATTAACGGACGAGCAAGTGGAAGCGTATCAACGTG
ACAGTTACGTCATTTTACGTGATCTTCTAACGCCGGAAGAGAAGAAAGAT
TTTCAACGTATCGCcactgaaattgaaaattggcCAATCAGCGATGACTG
GTTTTCCTATTTTGAAGAAGTAGGCGGTGTGAGGCGTTTGTCAAGATTAG
AAGGCTTCTACAACCACCACGCTGACTTAAAAAAACATGTCAAGGGCAAG
TTAGGTCAAGCTGCTTCCGATTTAATAGGCGAGGAAGCAatacttttcaa
agaaaaactaaacATGAAATACCCTGGTGGTTTTGGTTATGACCCACACC
AAGATGGAGTTGGCTCTTGGAattattttggtcaatttttccacATGTCA
GCTGTGGTCACTTGTGATCCAATGACTATTGAGAATGGTTGTCTACAAGT
GGTTCCTGGAGACTGGGGGGAATTACCATGGTTACCAATGGATATCAATG
GTGATATTACAGAGGAAGTTGCGAAAGGGTTGGATTGGAAACACATGATT
TGTGATGCTGGAACTGTCATCATGTTTAATTCTCATGTCCCTCATAAATC
AGATGTCAATCAAACGGACCAATCACGACGCGCCTTTTTTATCACGTGGA
ATGGTGAATCGTTGGGTGATACTCGGCAAAAATATTATGATTTGAGACGT
GAATGTCATCCACCAGATCATTTGAGAGATCCAAATAAAGATTATACAGA
ATTGATTAGAATCTTTAATGAACATAATTTAGAACAATCGAATGACAGAT
GGCAACCAGATttagaagaagaaacaaaatgattaaattttaCTTTGGAA
GTGTGTAACTTTAAATGTAAAGAAGCCatgaaaaatcaataaaatttgtt
taaaaacgCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006765-exon-sc0000070-1491911889:556540..556624 | TCONS_00006765-exon-sc0000070-1491911889:556540..556624 | Clytia hemisphaerica | exon |
| TCONS_00006765-exon-sc0000070-1510915933:556540..556624 | TCONS_00006765-exon-sc0000070-1510915933:556540..556624 | Clytia hemisphaerica | exon |
| TCONS_00006765-exon-sc0000070-1575043694:556540..556624 | TCONS_00006765-exon-sc0000070-1575043694:556540..556624 | Clytia hemisphaerica | exon |
| TCONS_00006765-exon-sc0000070-1491911889:556868..557799 | TCONS_00006765-exon-sc0000070-1491911889:556868..557799 | Clytia hemisphaerica | exon |
| TCONS_00006765-exon-sc0000070-1510915933:556868..557799 | TCONS_00006765-exon-sc0000070-1510915933:556868..557799 | Clytia hemisphaerica | exon |
| TCONS_00006765-exon-sc0000070-1575043694:556868..557799 | TCONS_00006765-exon-sc0000070-1575043694:556868..557799 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:556540..557799 + |
Blast
The following BLAST results are available for this feature:
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