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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006750 ID=TCONS_00006750|Name=TCONS_00006750|organism=Clytia hemisphaerica|type=transcript|length=716bp
GAAACATGAGCAACTACAGTCTGAATTAAACCTTGAGCGCAAGAAaaata
caGAAGCCCAAATGTTGATTgaagaacaaaaaaacaaaattgataGACTT
AGTAAAGAAAATAGAGATTTTCGCAATAGGATCAGCAATTACCAACAGAT
GGTTCTCAAAAGTTTTGGCCCTTTGTTAGAATCTCAAACAACTGAAGAAG
AAAGCGAAGAAAAGAGTGATGGTGGACAATGAAATGTCTGAATGTAAAAC
CCTATAGTGCCTTATACTGTTTATCAATCTTGACTGCCGTCAGggaggtc
agggttcgattcccactggATGCTAttattcacttggcaagtgaatgtga
AGGGGAATAgggtagacagaaactcaatAAGCCTGTTTATTACTGGGCTA
GGTATTGATTCCATAATACGCCATGGCCTTTTTCTCTAGTGGTTCACACT
GGATTAACGCACTTAATTCAAAAACTGTGTGTCAATGTCTGGTAAGCTGG
CAGGCAGTAACACTAAAGCGTAAGACGGTTCTAATCTTCTAACGAGAAGA
CTCCTAATATGTAATGTATCGCTTTTTTAGTTATTTTATATGATTTGTAA
AAATACcatatttttatgtaatttgtACAGGACACGTTCACACACATCAA
TAAattaaaatactattttttcactagttttatttattattattcgtttt
gttattatttctattt Run BLAST on NCBI transcript from alignment at sc0000070:323070..325853+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006750 ID=TCONS_00006750|Name=TCONS_00006750|organism=Clytia hemisphaerica|type=transcript|length=2784bp|location=Sequence derived from alignment at sc0000070:323070..325853+ (Clytia hemisphaerica)
GAAACATGAGCAACTACAGTCTGAATTAAACCTTGAGCGCAAGAAGTTTG
TCTTTTCACttcaaaattataattttcaattaaaaactCACTCTTTGTTC
TGCTTGTGTATGCTTTTCTTTACAGTACTTATGCTAGAAAACAGATTATA
TACTTTTCTTTAAACTCATTAAATTTTCAGACAAAGTTGATATTTCGTAA
GTTTCCACTATATTGATtaccttttatttgaaatttcatgTACATAACAA
TTTTGTGTGAAACTATTATCAGAGTCCTCAAAAATAACAATATCAACATT
TTTAAAGCAAATACCAGTAAAAGATTCTAATAAAGATCTGTTTCACGGTG
tgatttttcagaaatacaGAAGCCCAAATGTTGATTgaagaacaaaaaaa
caaaattgataGACTTAGTAAAGAAAATAGAGATTTTCGCAATAGGTTGG
tataaatttcatttatttcCAATTCCACTTTTGTTAATTTTCTTATTGAT
GATCTCTATCGTGTCTGTCTTGGCCTGTTATCGGGGTACCCAAGGCACTC
TCCAATGGCCGCACAAGGTCCCACCCCTTAACGAAAAAgtctttttaggt
ttttcaaAGTGTTTCGATATAGAAAAAGAGATGGAACATGGTCAGATGGT
CCCACTTGCTctttaattgaaaattttttgacaaaaacctcaatttttcc
cattttgatgacgtcttACTATTATAAAGGAAATCTTGAATAACTTGAAG
AAGGAAAaaacttttcgatttttcgATTTCGCAGCAAGTTGGACAGTCTG
ACCGTGCTCCATCTCATTTTCTATATCGAAACGCTtcgaaaaaacttgaa
aaacatTAACTAGTTTGAGTAAACAAAACGAActaagttaatttcatact
caaagtttcatgccacCCAGGATGGCAATCCTCAGTGAAATAAATGTTCT
ATAAAAATCAATAATTTGATGTCTTCAAGAAATTTTCTGACgtcaattca
aaattcaaaattatttgaaagTCTCGAGGAGAAATAATTTCCGTCTGCGA
CGGCATTTGGCGATGATTCCAGTTTGCTTAATTCACAAGTTCTGACCCGG
AAAGGGGGCAATCTCCTGCAATTTCTCCTGTAAGCATAATAAACAGTTGT
TTGTTTCTGGGGTATAAGCTCTTTTGTGGCACACTATTTTTCAGCTAAAT
GTCAGGTTTCCATTTTCTTTCATGTTCCAGAAGTCTGTTGAAAGGGTGTT
ATTGAAGTTCTTGTTAGTCCGGGGTTAGCTTGTGTGTacagaaatgtttt
tttaaaaaagtataaCCGTACAATCCGATATATTTCTTTTCGGTGTTGTT
CTTCTTGCTTTGCAGTTCTGGTCAAGCGGCTTTGGGTTTGTGATTTTCTT
GTTGTGCTTATTGAGAACCGACTTCACTTTGGGCATACAGAACTCACTTT
CAATGTTGAGGATCTTGTAGTATTTATGCCCACGCAGAAAGTGCTTCTGG
ATTAAGTTTAAGAAAAACTTCCCGATATTTGTTGACAAGTTTGCATTATA
TATACGGTGGATTGAACCAAATTATCTTTCTCTTCCGATTTtttttgttc
tgttgttgatgTTACGTGTTGGTTTATATTCAAAAGTATGGTTATAACCC
GACCTTTGTAGTGCTTCTTGGTAATGCGGTGTTGCTTGGTGGAATATCTC
TTCACTCTATGAGATTGGATAAGTGTTTTTGAATTGAAAGTGGAATCTGC
TTGATGATGTTGGGAGGGTGGTTTGACGTTATTTGGCTTGTGGTCGATAT
GTACTATTTGTTATAGTAAAACGTTACATCAAGGTAGTAATTCACTGCCG
TCATGTTACATTGTATGACGATGTTTAGAATAATCGAAAGCATAAAGCAA
CCCACGAGCTCACACACCTTGGCATCGTCCTATGCACATTTACGTTAAGG
GGTGGAACCTTGTGCGGCCGATATGGGGAGTGCCTTAGGTACCCCGAGTC
TTAAGCTTAAGAATCGTGAATTTCCCTCTAGCTCttctgtttttatttca
aaattatgtAAAGAGAACTTTCACAAGTCgtcaaaatgaaatattttccg
ACTGGCCTCTAACATCGAGGGTCGGCTGAtggcaaaccaacatttttaag
tccagcctaatGAAAACTTTTCTACCTTGAGATTTCCTGTATTTTAGGAT
CAGCAATTACCAACAGATGGTTCTCAAAAGTTTTGGCCCTTTGTTAGAAT
CTCAAACAACTGAAGAAGAAAGCGAAGAAAAGAGTGATGGTGGACAATGA
AATGTCTGAATGTAAAACCCTATAGTGCCTTATACTGTTTATCAATCTTG
ACTGCCGTCAGggaggtcagggttcgattcccactggATGCTAttattca
cttggcaagtgaatgtgaAGGGGAATAgggtagacagaaactcaatAAGC
CTGTTTATTACTGGGCTAGGTATTGATTCCATAATACGCCATGGCCTTTT
TCTCTAGTGGTTCACACTGGATTAACGCACTTAATTCAAAAACTGTGTGT
CAATGTCTGGTAAGCTGGCAGGCAGTAACACTAAAGCGTAAGACGGTTCT
AATCTTCTAACGAGAAGACTCCTAATATGTAATGTATCGCTTTTTTAGTT
ATTTTATATGATTTGTAAAAATACcatatttttatgtaatttgtACAGGA
CACGTTCACACACATCAATAAattaaaatactattttttcactagtttta
tttattattattcgttttgttattatttctattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006750-exon-sc0000070-1491911889:323070..323114 | TCONS_00006750-exon-sc0000070-1491911889:323070..323114 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1510915933:323070..323114 | TCONS_00006750-exon-sc0000070-1510915933:323070..323114 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1575043694:323070..323114 | TCONS_00006750-exon-sc0000070-1575043694:323070..323114 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1491911889:323431..323514 | TCONS_00006750-exon-sc0000070-1491911889:323431..323514 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1510915933:323431..323514 | TCONS_00006750-exon-sc0000070-1510915933:323431..323514 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1575043694:323431..323514 | TCONS_00006750-exon-sc0000070-1575043694:323431..323514 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1491911889:325267..325853 | TCONS_00006750-exon-sc0000070-1491911889:325267..325853 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1510915933:325267..325853 | TCONS_00006750-exon-sc0000070-1510915933:325267..325853 | Clytia hemisphaerica | exon |
| TCONS_00006750-exon-sc0000070-1575043694:325267..325853 | TCONS_00006750-exon-sc0000070-1575043694:325267..325853 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070 | supercontig | sc0000070:323070..325853 + |
Blast
The following BLAST results are available for this feature:
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