TCONS_00006721 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006721
Unique NameTCONS_00006721
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2396

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006721 ID=TCONS_00006721|Name=TCONS_00006721|organism=Clytia hemisphaerica|type=transcript|length=2396bp
aactcgagatattgagcttcaaaaagcgcaaaaactggacaagatggctg
tttctggctgaaaaacacggttttcaagggttataGATAGTTTCACTGTT
TAATTCCATTAAAGGTCATCAACAATGCTTGTGCAACGCAAGCTATCATT
AGCATTCTACTCAACCTCTCGCATAAAGATGTTCAACTTGGAGATAACCT
AAGctctttcaaagaattttcaaaacaatttgatCCAGCACTTAAAGGAT
TGAGTTTGTCGAATTCTGACGTTATCAAACAAGTCCACAACAGTTTCGCT
AGACAACAAATGTTTGAATTTGACCAAACTGTACAAGATGAGGATAAAGA
TTCGTATCATTTTGTCGCTTATCTTCCCATCAATGGACGTATGTATGAGT
TGGACGGTCTAAAAGAAGGTCCAATTGATCTGGGTGCGTCAACATACGAT
AAATGGCTTGAAAATATAAAACCTATTATTGAAAGACGAATGCAACGTTA
CTCTGCAGaagaaattcatttcaatttgatGGCTGTCGTATCGGATCGCC
AAGACCtatattcaaaacaaatcaacGAGCTTAAAACACAGAAAGATTCA
TTAATGCAATCGGGTATGGAAACTGaccaaatcaaaataatcgATGATGA
GATTTCCAGATGTCATTCGATGTTGGaaagagaaaaggaaaaattacaaA
GATACAAGACTGAAAACGTCAGAAGAAAGCACAACTATCTACCCTTCATC
ATGGAGTTGTTAAGGATACTGGCTAAGAAGCAACAACTCGTACCCCTTGT
TGATAAGGCCAAAGAAGTCACAAAAACACGACGTGAACAAGATAAAGCAA
GGAAACGAAAATTGGAAGAGAAAAAATAATCGAAGAGAACCTTGAAGAAA
CTTTGCAGGAAAGTTCTGCGTATGAATAAAAGGCGATTAAACATTCTCCG
TACGATTCGGCCCTgaatttgttatttattttgaaggCGGCGAAGAATAT
CTCGTTCACATCATcttcataaaaaatttaatgacagTTTAATGTTGATT
TAATGACGTGACTTTAGTGAATATAAACTTTTTAATAGAAGTTTTTCAGT
TAGTTTCAGATAGTTTTTTCAACTTGGATTTTTTATTGCATAAtgcattt
taaaatgaaaacattatcATTGGGCGAGATGAAATCACTTTGGATTAGCA
TATGtttgactttgttttcatcctTCAACACTTTCAAAGACCTCTCCATg
ttgggtcaagctggagtttttacaagctcttgttTGATTTAGTTGGTTTT
GGATATAAcaattataaaataatataatgaaataaaaaacgatttaataa
tttttttccgaaaacGCGTTATCTCCATTACATTAAATTAccatttagtg
aAGTATCGTAAATTTAAAATGTTTGATCAAATTAAGTGTTGCTAATTCTA
CCCCAGATCATCGTCCAATTCCATTATACTAACTCAACAATTGGTTTCAT
TAGATCAACTCTTGAAAAACTCAATTGTCATTCataaatactactgtatg
ttaTAGTATCTACTGATGGATCTTTCAGTTTTCCATAAAGACATCCCCGA
TCAAGAGTTTGGAAACTtcttctttgatatttttatgtttagcaACAATA
GGTCTTAAAAGTTCTACCATCTGTTTAGCAAAATCAATAGCAAATTGTGT
GAAATCTGCTACATTGAATTGAACCTTAAACTGATATCCACACAAGCTGT
CTTCATCGCAAAACGTACACATcaaatcattttcaatcttGAATGTATAA
TTACCAGAACTTATAGACTGGCATAGTCTTttcagtatgtttttattcgg
GAAAGTATCAATACCTTCTAGCTTACTTAAAGGGTACGCCATAGCTTCCA
CTTTAGTATTAAAAGTTTGTAACAGTACAAACATCTCTTCTACACCAGCT
TCACTTTTAAATTTATCAAAGGCTTCGGTAACCAAAGAATCTTTCCCCTC
CATTTTCTTCACCAGCTCTTGTTCATTTTGAATCGCTTCGAAAACGCGTT
TTAACGCTTCTTGTGGTGCAACAAAAACAGTAAACCAGTAACCAGGTAAT
ATATGATGGCTCCCTAACGGTGTGCCAGCTACTTTACCGTTATTTATCGT
CATCTTACGATAAACAGAATCGTTCACTAAATCGTATATCGTGTGCGACA
TAACGTAAGCGTCATTAACACGACTGACAAAATTCGTCAAACATTCTTCC
GTATTTATAATCGAATGTCCACCCGTTTTTAACATCTTTTTGTTTCCCAG
ATAATCTTacaagttgattttttttcaagtaaatcgACTCtatatttgaa
aatgatgaataaTATTATAGAGCGCGAGAGTTTTTTTCTCCCCATA
Run BLAST on NCBI

transcript from alignment at sc0000070:86678..94635+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006721 ID=TCONS_00006721|Name=TCONS_00006721|organism=Clytia hemisphaerica|type=transcript|length=7958bp|location=Sequence derived from alignment at sc0000070:86678..94635+ (Clytia hemisphaerica)
aactcgagatattgagcttcaaaaagcgcaaaaactggacaagatggctg
tttctggctgaaaaacacggttttcaagggttataGATAGTTTCACTGTT
TAATTCCATTAAAGGTCATCAACAATGCTTGTGCAACGCAAGCTATCATT
AGCATTCTACTCAACCTCTCGCATAAAGATGTTCAACTTGGAGATAACCT
AAGctctttcaaagaattttcaaaacaatttgatCCAGCAGTAAGTATGT
AGGtgtttgatgttgatttcagtTTTTTGCCGTTAAACAAGGAAAACTTT
TTAACAAATCacgttttgagaaatttttggaaaatatcttTTGCTCAGCT
TTATTCAATGttaatttttcacaatttttatttcaaatttcgattttagC
ACATGCGAAACAGGAATATTACTAGGACATGATAAGAATATGTATATGTC
AGggaaagcttttttattttctttaattttcccTTTGACATAATTTAAAC
ATCACCTCGATATATTTCAGCTTAAAGGATTGAGTTTGTCGAATTCTGAC
GTTATCAAACAAGTCCACAACAGTTTCGCTAGGTATGTGAAAAACACAAT
TGTTTTGAAGAACCTAACAGTTTAGTGTTGCGTCCACATTcagaaatata
atatctacCATTCACAGTCAAAGTCAACCAATAAACCTTTTGAAGCTCCT
TAAACATCCAGGAATTTATGTTATTTTTTAGGAAGCGATATCCCTCACCC
TTCCCAACCACCAACACTGCCAATCCAATTAAGAGCTCATTTCGACCCAT
CTTAGTTtcaatacagttgactctcgccaattcgaactcgaacaggGGAA
tgttatttgttcgaattacagagagattcgattTATAGCAAGTATTTAAG
AGGGTTTCTAGTTGACACGGGGACTGAGAAtatgttcgaattacagaaag
ttcgaataagcgagagtctactgtagatttttcattcttttttcgtttat
tttttttgtgCAGACAACAAATGTTTGAATTTGACCAAACTGTACAAGAT
GAGGATAAAGATTCGTATCATTTTGTCGCTTATCTTCCCATCAATGGACG
TATGTATGAGTTGGACGGTCTAAAAGAAGGTCCAATTGATCTGGGTATGT
AGATGCTTCTTTTATGAAATTCTGTGAGGCAACTCCAGTTGGTCTCATTT
ATAAGGTCACTTAAGAATTTTAtagaataaaatattttataaaataaaat
caaattgaatTATCTACCAGCTGCGTCAAAAGTATGTTTACAGGCTTGTC
AAAAATATTGGGAGTTTAAAAACAGATAAGAATATTTTGGTGattccttt
ttggacctacctccgggtggaggttctataaattaacccatgtccgttcg
ttcgttcgtccgtccgtccgtctgttagtCAGCTTTTCTCAgaatcggct
cattagttttttctgattttttgcacaatgatgcaaaatggcaatgccca
gaacgtgacggagcccgatttttgagaaaaaatttatttgggcaaatttg
ggccaaaaactacctaaaaatagggttttttggactttgcaaaatactgt
cattacttttttctgattttttgtacaaagatggagggcaagattctcta
aagaatggctgaattagtttttcctggaaaattcttattcgccttaaaaa
cggattttcgtattttgggggaaattccctttaactaaataagaaaatat
agcttttctcaatgttgactcgttatttttttctgattttttgcacaatg
atgcaaaatggtaatgcctaaaatgtgtcggagcccaattttcgagaaaa
aatatatttgggcaaatttggtcCAGTCATTACTTTTGTCTGactttttg
tacaaagatggagggcaagattctctacagaatggctgaagtggtttttc
ctggaaaattcttattcgccttaaaagacggattttcgtattttggggaa
attccctttaaccaaataagaaaatatagCTTTTCTCAATGTTGACTCAT
AATTTTTTTCTCATTTTttacacaatgatgcaaaatgacaatgcccaaaa
tgtgacagagccagattttaaggaaaatttttttgggcaaatttgggcca
aaaacagcctaaaaggttttttgggcctgaatggtttaagtgattttcgt
atttgggggaattcctttttaccattttacattattcaacacacaagctt
tatttttccattctgaatttttgtacaattattgtcacttttttcttatN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tcaacacacaagctttatttttccattctgaatttttgtacaattatttt
cacttttttcttattttcatctgatgttaatcattaggtaggtccattca
gcacgttgcttgtttttttgttttttttacactAGACTTAACTTAAGTTT
TAGTGTATATAACTTTAAAATCGAAGGTCAATCAAATGTTGTGTTGAATA
CCGAAAATTTTGACCTCAAAATTGTCGCAATTCATTAAAAACAAAGCATT
TCCTTGTTAGGTGGCGGAAGTTTGCGAAATGCATGGTTGCATTATCAAGT
TAAGATCTagttaaagggacattacagtagtaattaaagagaacaatgaa
aatcacgtgtccaaaacaaacttgtaaaacaattgaacaatcaaaattag
ccatatttggtttgattttttattttgacatgNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNttgattttttattttgacatgtgacatttgtttt
gattttgtatccgctgcatacagtttgtttacaaatttcgcaagtactgt
tatgtccctttaagagaAACATTTTCCATTAATTTTTCAGGTGCGTCAAC
ATACGATAAATGGCTTGAAAATATAAAACCTATTATTGAAAGACGAATGC
AACGGTAAGATAAATACTCCAAATATTCCAAAGGTGTcacccaaaattca
aaaaattcaaaagtcaaattcATGTGgattattttttctcttttaccttg
attttaaaaattaagtGCTTGGGTTACGctttctttggaaaatttgaaaa
taatgggGCACTactaaaaagttattttctggTATGAAAATTAGAATGTT
GCAGTTAAAACCGAAGTGTAAGTCTTTTTCATGACCTTTGATTTATTTCA
GTTACTCTGCAGaagaaattcatttcaatttgatGGCTGTCGTATCGGAT
CGCCAAGACCtatattcaaaacaaatcaacGAGCTTAAAACACAGAAAGA
TTCATTAATGCAATCGGTATGAAACATTTcctttggagtgcaattttaaa
cattgaatttcaagtggggatgaaatcaaagtcagttTTAGATTGAATGA
ATTATTTTGAGACTTGAGAGTAACAGATGATGTTATTTTTGACTGACTCC
ATAGATACCCAGCGAAAAAATACCTTTGTAAAAATTACGCGAACGAAGGG
AGCAAGAAAacttttgggtatttttttctctttttggctgaaaactgcTA
ATTCTAAAGTGTAAAAGCAAAGGGGTGCCAAAATTAGTAATGAGATACGC
CTTTTTCCAACCCTTGTCTTTTAGCGCCCTCCACTGCCCCCCCCCCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcgccattttgaaaaaaaaat
gttaaaaatctaaataacaataaaactacttggagttgaaaaatataatc
aaaaatgagaaacaaacacgatgaatagatttgcaatcccttattctcaa
ataaaaacattgcttcatactgtttttaccttccaaaaacaactaaaatc
tggcggactgttttacagtccgcNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNaaaacaactaaaatctggcggact
gttttacagtccgcctaggcaaaagcatattacaatatactaccgggcca
cttaatcgcgccatccagtctataaaaaagctttaagtggaccccgggct
actcCCCTGTCACCACGCTACTGTGATGACCCTAGATAATattcaagttt
tgaaaatatttataggAGTTCTATTagatttgaaattcttttggtCTTGT
GAGGCAATTGTGAGTTTGGCATTATGGATTTATGTGCAACTGTTCTTTTA
AAGTgataccatgaacatataaaatactggacgtctatcttcttTTGTGT
CTTTGAAGTGAGCTTCGTTGCCTCCTGCATTTCaaacttgtaataaaaaa
tCCTACTTTATTTCGTCATAATTTTGACGCtcaattttcgggaaaaaaaa
ttttgagcccaaaaataggtttttttggactttgtgaaaaatctgttcat
tagtttttcctaattttttgttcaaagatGTAAAATTACAGTGTGCTAAT
ATGAAAAAGTtcctttttcgaaaaaaatttctacGGCctaaaaatgccca
aaaatagggtcaatattttttattttgaccagttatgtcttatgtttttc
attgttttaatgttcagttttgataaccaggtaggtccataaaagtatca
cttgttcctTTTATAGGGTATGGAAACTGaccaaatcaaaataatcgATG
ATGAGATTTCCAGATGTCATTCGATGTTGGaaagagaaaaggaaaaatta
caaAGATACAAGGTATgcacacattttttataagcaacagAGTTGCTAAG
GGTCCAGCGCTGAGAATGGCCAGATTGAAGCATTGGTTGAGAAATAATAA
GCAAAGCTAAatttagtgcacacttatcgtgaatataCTTTAGAAccaat
tataaaaaaagatgattattcttttaaaattaaaagGGCGAAATAAGCCA
AACGTAGAAGCTTCAAGAAAATAACTTACTATTTAAGGCTATTGTGTTTA
GTTTAAAGCCTTTCTTTTGTTACAGACTGAAAACGTCAGAAGAAAGCACA
ACTATCTACCCTTCATCATGGAGTTGTTAAGGATACTGGCTAAGAAGCAA
CAACTCGTACCCCTTGTTGATAAGGTgataattttcatcaaattttaaac
attatttttccTACCAATACAGTCAAGTCAATgccattttctattttttt
cccttcaaaaatcattttgcaGGTTCGGTAAGATTgaatatcaaactttt
tttcttttgcagcgtgcataaaatttatcaaattattTACTTCCTTGTGT
ATTTATTCCAGGCCAAAGAAGTCACAAAAACACGACGTGAACAAGATAAA
GCAAGGAAACGAAAATTGGAAGAGAAAAAATAATCGAAGAGAACCTTGAA
GAAACTTTGCAGGAAAGTTCTGCGTATGAATAAAAGGCGATTAAACATTC
TCCGTACGATTCGGCCCTgaatttgttatttattttgaaggCGGCGAAGA
ATATCTCGTTCACATCATcttcataaaaaatttaatgacagTTTAATGTT
GATTTAATGACGTGACTTTAGTGAATATAAACTTTTTAATAGAAGTTTTT
CAGTTAGTTTCAGATAGTTTTTTCAACTTGGATTTTTTATTGCATAAtgc
attttaaaatgaaaacattatcATTGGGCGAGATGAAATCACTTTGGATT
AGCATATGtttgactttgttttcatcctTCAACACTTTCAAAGACCTCTC
CATgttgggtcaagctggagtttttacaagctcttgttTGATTTAGTTGG
TTTTGGATATAAcaattataaaataatataatgaaataaaaaacgattta
ataatttttttccgaaaacGCGTTATCTCCATTACATTAAATTAccaatt
aaagtctattcacgataagtgtgcactcttttttcttttacctataactt
ttgaaggNCAACTTGGATTTTTTATTACATAAtgcattttaaaatgaaaa
cattatcATTGGGCGAGATGAAATCACTTTGGATTAGCATATGtttgact
ttgttttcatcctTCAACACTTTCAAAGACCTCTCCATgttgggtcaagc
tggagtttttacaagctcttgttTGATTTAGTTGGTTTTGGATATAAcaa
ttataaaataatataatgaaataaaaaacgatttaataatttttttccga
aaacGCGTTATCTCCATTACATTAAATTAccaattaaagtctattcacga
taagtgtgcactcttttttcttttacctataacttttgaaggaattcttc
aatctttataaatttggtatcaatgGAAAGGTATTANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtaatatctttccaatgataccaaatttataaagattgaagaat
tccttcaaaagttatcggtaaatgaaaaaagagtgcacacttatcgtgaa
tagactttagtgaAGTATCGTAAATTTAAAATGTTTGATCAAATTAAGTG
TTGCTAATTCTACCCCAGATCATCGTCCAATTCCATTATACTAACTCAAC
AATTGGTTTCATTAGATCAACTCTTGAAAAACTCAATTGTCATTCataaa
tactactgtatgttaTAGTATCTACTGATGGATCTTTCAGTTTTCCATAA
AGACATCCCCGATCAAGAGTTTGGAAACTtcttctttgatatttttatgt
ttagcaACAATAGGTCTTAAAAGTTCTACCATCTGTTTAGCAAAATCAAT
AGCAAATTGTGTGAAATCTGCTACATTGAATTGAACCTTAAACTGATATC
CACACAAGCTGTCTTCATCGCAAAACGTACACATcaaatcattttcaatc
ttGAATGTATAATTACCAGAACTTATAGACTGGCATAGTCTTttcagtat
gtttttattcggGAAAGTATCAATACCTTCTAGCTTACTTAAAGGGTACG
CCATAGCTTCCACTTTAGTATTAAAAGTTTGTAACAGTACAAACATCTCT
TCTACACCAGCTTCACTTTTAAATTTATCAAAGGCTTCGGTAACCAAAGA
ATCTTTCCCCTCCATTTTCTTCACCAGCTCTTGTTCATTTTGAATCGCTT
CGAAAACGCGTTTTAACGCTTCTTGTGGTGCAACAAAAACAGTAAACCAG
TAACCAGGTAATATATGATGGCTCCCTAACGGTGTGCCAGCTACTTTACC
GTTATTTATCGTCATCTTACGATAAACAGAATCGTTCACTAAATCGTATA
TCGTGTGCGACATAACGTAAGCGTCATTAACACGACTGACAAAATTCGTC
AAACATTCTTCCGTATTTATAATCGAATGTCCACCCGTTTTTAACATCTT
TTTGTTTCCCAGATAATCTTacaagttgattttttttcaagtaaatcgAC
TCtatatttgaaaatgatgaataaTATTATAGAGCGCGAGAGTTTTTTTC
TCCCCATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003767XLOC_003767Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006721-exon-sc0000070-1491911889:86678..86917TCONS_00006721-exon-sc0000070-1491911889:86678..86917Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:86678..86917TCONS_00006721-exon-sc0000070-1510915933:86678..86917Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:86678..86917TCONS_00006721-exon-sc0000070-1575043694:86678..86917Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:87198..87259TCONS_00006721-exon-sc0000070-1491911889:87198..87259Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:87198..87259TCONS_00006721-exon-sc0000070-1510915933:87198..87259Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:87198..87259TCONS_00006721-exon-sc0000070-1575043694:87198..87259Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:87691..87821TCONS_00006721-exon-sc0000070-1491911889:87691..87821Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:87691..87821TCONS_00006721-exon-sc0000070-1510915933:87691..87821Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:87691..87821TCONS_00006721-exon-sc0000070-1575043694:87691..87821Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:89668..89731TCONS_00006721-exon-sc0000070-1491911889:89668..89731Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:89668..89731TCONS_00006721-exon-sc0000070-1510915933:89668..89731Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:89668..89731TCONS_00006721-exon-sc0000070-1575043694:89668..89731Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:89979..90093TCONS_00006721-exon-sc0000070-1491911889:89979..90093Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:89979..90093TCONS_00006721-exon-sc0000070-1510915933:89979..90093Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:89979..90093TCONS_00006721-exon-sc0000070-1575043694:89979..90093Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:91694..91789TCONS_00006721-exon-sc0000070-1491911889:91694..91789Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:91694..91789TCONS_00006721-exon-sc0000070-1510915933:91694..91789Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:91694..91789TCONS_00006721-exon-sc0000070-1575043694:91694..91789Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:92053..92151TCONS_00006721-exon-sc0000070-1491911889:92053..92151Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:92053..92151TCONS_00006721-exon-sc0000070-1510915933:92053..92151Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:92053..92151TCONS_00006721-exon-sc0000070-1575043694:92053..92151Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:92339..92924TCONS_00006721-exon-sc0000070-1491911889:92339..92924Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:92339..92924TCONS_00006721-exon-sc0000070-1510915933:92339..92924Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:92339..92924TCONS_00006721-exon-sc0000070-1575043694:92339..92924Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1491911889:93633..94635TCONS_00006721-exon-sc0000070-1491911889:93633..94635Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1510915933:93633..94635TCONS_00006721-exon-sc0000070-1510915933:93633..94635Clytia hemisphaericaexon
TCONS_00006721-exon-sc0000070-1575043694:93633..94635TCONS_00006721-exon-sc0000070-1575043694:93633..94635Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:86678..94635 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.25598	6.39369	5.96107	5.68782	4.02512	3.31572	24.3459	25.7054	16.3015	14.4683	8.7992	9.22572	3.02029	2.29481	2.60161	2.81499	4.68395	4.36961	3.62205	4.42139	6.07284	5.98743	4.02727	4.45833	8.18459	7.11559	6.17023	4.32287	1.46157	1.58303
Blast
[Close]
BLAST of TCONS_00006721 vs. Swiss-Prot (Human)
Match: UCHL5 (Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens GN=UCHL5 PE=1 SV=3)

HSP 1 Score: 315.849 bits (808), Expect = 1.042e-99
Identity = 145/248 (58.47%), Postives = 196/248 (79.03%), Query Frame = 1 
Query:  112 KVINNACATQAIISILLNLSHKDVQLGDNLSSFKEFSKQFDPALKGLSLSNSDVIKQVHNSFARQQMFEFDQTVQDEDKDSYHFVAYLPINGRMYELDGLKEGPIDLGASTYDKWLENIKPIIERRMQRYSAEEIHFNLMAVVSDRQDLYSKQINELKTQKDSLMQSGMETDQ----IKIIDDEISRCHSMLEREKEKLQRYKTENVRRKHNYLPFIMELLRILAKKQQLVPLVDKAKEVTKTRREQD 843
            +VINNACATQAI+S+LLN +H+DV LG+ LS FKEFS+ FD A+KGL+LSNSDVI+QVHNSFARQQMFEFD     +++D++HFV+Y+P+NGR+YELDGL+EGPIDLGA   D W+  ++P+IE+R+Q+YS  EI FNLMA+VSDR+ +Y ++I EL  Q+    +  M+TDQ    +  I  E+++   ++E E +KL+RYK EN+RRKHNYLPFIMELL+ LA+ QQL+PLV+KAKE    ++ Q+
Sbjct:   82 QVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAEL--QRQLAEEEPMDTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQE 327
The following BLAST results are available for this feature:
BLAST of TCONS_00006721 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UCHL51.042e-9958.47Ubiquitin carboxyl-terminal hydrolase isozyme L5 O... [more]
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