TCONS_00006714 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006714
Unique NameTCONS_00006714
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006714 ID=TCONS_00006714|Name=TCONS_00006714|organism=Clytia hemisphaerica|type=transcript|length=370bp
Gtcgaaaacaaacttgtaaaacaattaaaacaatcaaaatcagccatatt
tgttttgattttgtatccccaATGCATACGGTTTATTTACAAccttcgtc
agtacttttatgtcctcTTTAACATTCACTCATTGTATGCAATTCTTGTA
AAGCTTTACGAAGCTGAATGCTTTTATTGAATTGCTTCTTTTTAGGCCAA
AACTTTGATTCTAGAACGTAGATTCTAAAGATGCATCATGCTTAGATTAC
TACagtaattaaaaataatttgtagaTAGTTGAATTTTTATAGTCTTGTA
TTATCTTATTATAATAACTTATAAAAGTTGTTTATATTCTTTAGTGTAtt
aaaatatacaaacaaaagaa
Run BLAST on NCBI

transcript from alignment at sc0000069:570266..570635

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006714 ID=TCONS_00006714|Name=TCONS_00006714|organism=Clytia hemisphaerica|type=transcript|length=370bp|location=Sequence derived from alignment at sc0000069:570266..570635 (Clytia hemisphaerica)
ttcttttgtttgtatattttaaTACACTAAAGAATATAAACAACTTTTAT
AAGTTATTATAATAAGATAATACAAGACTATAAAAATTCAACTAtctaca
aattatttttaattactGTAGTAATCTAAGCATGATGCATCTTTAGAATC
TACGTTCTAGAATCAAAGTTTTGGCCTAAAAAGAAGCAATTCAATAAAAG
CATTCAGCTTCGTAAAGCTTTACAAGAATTGCATACAATGAGTGAATGTT
AAAgaggacataaaagtactgacgaaggTTGTAAATAAACCGTATGCATt
ggggatacaaaatcaaaacaaatatggctgattttgattgttttaattgt
tttacaagtttgttttcgaC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003760XLOC_003760Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006714-exon-sc0000069-1491911889:570266..570635TCONS_00006714-exon-sc0000069-1491911889:570266..570635Clytia hemisphaericaexon
TCONS_00006714-exon-sc0000069-1510915933:570266..570635TCONS_00006714-exon-sc0000069-1510915933:570266..570635Clytia hemisphaericaexon
TCONS_00006714-exon-sc0000069-1575043694:570266..570635TCONS_00006714-exon-sc0000069-1575043694:570266..570635Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:570266..570635 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.84789	3.65303	3.99202	2.68508	0.297166	0.234825	0.849917	0.795682	0.185692	1.15005	0.669758	1.76109	0.732768	1.67417	1.3764	1.3428	2.48134	1.52597	0.468492	1.22561	5.797	4.9882	5.08397	5.28318	0	0.21115	6.64742	3.86962	5.73292	8.47243
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006714 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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