Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006585 ID=TCONS_00006585|Name=TCONS_00006585|organism=Clytia hemisphaerica|type=transcript|length=1643bpRun BLAST on NCBI transcript from alignment at sc0000069:285002..291639+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00006585 ID=TCONS_00006585|Name=TCONS_00006585|organism=Clytia hemisphaerica|type=transcript|length=6638bp|location=Sequence derived from alignment at sc0000069:285002..291639+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00006585 vs. Swiss-Prot (Human)
Match: AQP9 (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 3.846e-72 Identity = 124/263 (47.15%), Postives = 175/263 (66.54%), Query Frame = 3 Query: 144 RGGMDKLRGMKTPQLCREALAEFMGTLVLCTFGVGSVAQFVLAKQDFGGYWSVNWGWGLGVAFGIYWSGGISGGHINPAVSFALAVCGRFKWHKVPVYWIAQMLGAIIGSALAFGVYHDYLVEFSGSERLTSGANGTAGIWSTYPPDHVSNWTGFADQVLGTALFVGTIFALLDSKNIGVGSNIAPFLIGLIVLTMGTTFGINAGFGLNPARDLGPRIFTAIAGWGGTPFSAHNNWWIYPXXXXXXXXXXXXXXYELTIAIHH 932 +G K R + L +E L+EF+GT +L G G VAQ +L++ FGG ++N G+ + VA IY +GG+SGGHINPAVS A+ + GR KW K+P Y AQ LGA +G+A FG+Y+D L+ F+G + L G N TA I++TYP ++S FADQV+ T + + +FA+ DS+N+G + P IGL+++ + ++ G+N+G +NPARDL PR+FTA+AGWG F A NN+W PV+G LVG +GGL Y L I IHH Sbjct: 8 KGKSFKQRLVLKSSLAKETLSEFLGTFILIVLGCGCVAQAILSRGRFGGVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRGLEPIAIGLLIIVIASSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFWWIPVVGPLVGAVIGGLIYVLVIEIHH 270 The following BLAST results are available for this feature:
BLAST of TCONS_00006585 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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