XLOC_003724 (gene) - C. hemisphaerica

Overview
NameXLOC_003724
Unique NameXLOC_003724
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000069:285002..291639+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003724 ID=XLOC_003724|Name=XLOC_003724|organism=Clytia hemisphaerica|type=gene|length=6638bp|location=Sequence derived from alignment at sc0000069:285002..291639+ (Clytia hemisphaerica)
AAAGCAGCACAGATAGGGAGTGTGCAAAAAAAGGAAGCTATCTCTGTACC GCTGTTTTACCAAAAATCTGTCATCGTTCCCATGAGGTTGGTAAGAAAGT ATATTTATTTCATGTACTTCTAGATTTTAAATCTACTTATTTGGTGTATT GTTTTGGAGCAAATCCTAATTAACCCAATCCCAACGAtgttcttttattc ttttagaAATTGTAGattgtaataatttctttacTCCAGTCCAGGTATAA GTTCTCCTCCTCTTGTTTTTAAagtcactttttctttttcattcagttca aaattttcaaagatgaGGGAGGTTGGTGACTAgctcaaaaagttgaaaat atcaGAGGTACCTATCTTTTAGAATTGATAACAGTTATTTTTGCGGTATT TTTACATCTGCCTGTTTANGAAAATATCAGAGGTATCTATCTTTTAGAAT TGATAACAGTTATTTTTGCGGTATTTTTACATCTGTCTGTttaagtaata gttatcacacggtagagagtacaatatgggatatatttttcgagttcaga atTTTCGTCATATTTCGTCATAAAATACCGAAAACTCTGAGcgagaaaaa tatatcccatatatGGGATATATTGTACGAGTGAAAGTGCGATATTTCAA TCctgcgtttgtgtgaaaacaacGCGCGGATGTTCTGAATGGGAAATTAG TGGTTTTATTTCCAaaccaggagtctcgagtcaagcccttcgggcttgac gTTAATTCTCGTACCAACCTAATCTAAATTACTATAATTATACAGattga tttttgattgattttctgaattttgaaTAAAGATCAAGGTAATCAAAGTA TtttcagaacaattttataacaaAATGAGGCTCTAAATCATCTGAAATTA AGAATAATTTAGAACAACCTCCAGCATGAAAGCGTTGAGATTTTGAAGGT TAAAGTAGCAAAAATCAGGCGAAAATCCTAAACTACTTTGTTCTTAAATT AaattctttataagaaccaatagATTTTTTAGGCTCGGCTGCTCGTactt ttttggcactttgagcctcaaattgttctaaCCTTATTAATAAAGCTAAA TTTTAggccaatttttactactttgatccttaaattgcttgaaatttagG AAATCAGGCTCAACATTGTTCTAAAATTGTTGTTactttttggcgatttt gagcctcattgttcttataaaattgttcaaataaaaaagtgtacACGGTC GTTCTCATTTCGAAAGCTTTCATAGgggtgtttttattttattttacgaa AAATCTAAAGTTTTGCTATTGGATCAGTTGAAAACTCTATGAATTGTGCA TTTGAATGGAGCTGCAACTAAGTTCCTTAATTTACTACGTTTTTTTTACC ATTCAAAACTATTTAAACAATAGTTTTCGCAAACAATGAACAATTGATTA TTGAGCATGATTAACCTTCAATACACTGACGTTCGAAAATTGGAAAAGGT CTGTTTACACTACActcttttagtttttttctgtttttgcaaTCATTCAT ATTGATTAACCTTCATCCTTCATTTAAGACCCTATTGTATTTTTTCACGA ACTCTTGTATCTTTAATCAGGCTAAAAACTTAATTGGCATCGAATCCATA CGAAGATTATTTCAGCGAAAATGTGAATAGGGCcttattcattttttaaa acacACTGTTCTTCCTCCACGCTTCGTTGATTAAATGTATATTGTTTTGC ACGCTCGAGTAACCACGCCTCAGCTCAGCTTTTTCATTTCAACTTTTGCA AAAATACTGTCTGGAACTACTGAATATTTTTTTcgtgataaaaattttca ggtatattttgtttatttttgtttgttttgttgtttgtttattCTAGTTT GAGGGATCAATTTTCATGTcaacttttaatttttgaattttttgaggtAG TTTTAGCTATCCAATTTCTGATGAGATCTCTCTTTCTGTTttgctaaaaa aaaattattttgctaaTAGCATTTGTTCAAAGTCTGCAACTCGACTTTTT AATCTCCCAAACTTCTCAAACTAATAAGTTATGTAGTAAAGGTTCACCAG GCGGGAAGGAACAACTGTTAAAGTGGTGAGAGGCTAAAGGCTAAAAATGt gataaaattcgctaggaatttgagaaaaaatctcatttgctcaaaagtgg ggaggctgaagtctccccactTCCGCCCGGCCTGTTCACATAGTATCTCA TTTACTCAATAAACATTCCCAGATATTTAAACAcctaatattttattttg atttttcagggGGTATGGACAAATTACGGGGTATGAAGACACCTCAGTTG TGTCGAGAAGCCTTGGCTGAATTTATGGGAACACTCGTTCTTTGTGTAAG TATAATACATAATTTATCATAAACTTCCGAGTTCGAGCTCACTGGGTGTC AATGATGTTAAAAGTCTGTATCTGTCAgttccatcaatatgccaaaaaca ttttgttcaaccaccttcacttcaagataggccaccatagaatgaaccat attcatgtggctttcagccttgcactccatcacagagcctaattgagata ttttactaactagcccagagaaaattttaaacctttattatttgaattaa aaaattttaacttggtcattagtcaaaaaagtcattaaaattgattagcc tctgcgatggagtgcaaggctgaaagccacatgaatatggctcatcctat aaaaggaagttcattctatggtggcctatcttgaagtgaaggtggttgaa caaaatgtttttggcatattgatggaacGGTCTTTAGTGAGGGAGTCACC CAGTTCAGACATTCGAATCATTCGATACTGGTAGAATGTTCTTTCTAATT CGGACCTTCAATGGACTAAGAATTGTCTTCGAAaaggattcgaattacag aaagtttGTTAGTgtcttattaatttttttgctaagGGAACCAATacttt tagttcgaattatagagagttgactgtaatcTAGTCTTGCCGTTACTTTT CATGAGCCTTTTTTGGATTGTTGAGAATTCGGTCCTTCAGCATTTTAAAC ACGCAAGGAAGTAATAAAGGTATAAGAAAAACTTGAAGCTTAAGCCTCAT ATGCCCatcatatgaaaatatgtaacATTCCGAATACTTTCGACACGTTA TCTAAGCTACATGTTATCGACGGTCGTATTAAAAAACGAAAGcatgattt tcttttctttgcagACTTTCGGAGTAGGTAGTGTCGCACAATTTGTATTG GCTAAACAAGACTTCGGAGGATATTGGTCCGTCAATTGGGGATGGGGTCT TGGCGTCGCTTTTGGTATCTACTGGTCCGGTGGCATCTCAGGTAAGCGTC TGGGAGTTCCTTTTATCGGACACGTTCATGTTTACTACGGAAGAGAAGCG TAGAAGAGGTGCAAAATTCATGTAAGAGAGCGGATTTTTCTATGTTATTA AGAATATGCCCTCCTATCAAactgtatttttgaaattttgagaacTAGAG AATGTCATTATATACGGAAAGCTTTTAATTTGGAGCCATATTGTCTTTGG TCAAATAATGATGGAGTTAATTACGCTAGAtttcttgtttttaaataaga gtgattttacaagctttttgatatggaattgacacgaatgtggagcaaga taagtcagaaaaaggaaattaaaacatttctttgcttatatcagcataag gaaagcagacactgtcctgatattaaatatgtgtctgatatgaaacagga acacttatgtaaaaataaaacctttaacatcacTTTTCTGGAAATTGCAT TTTTGTGGACTACTGGAAATAAGGTGTTagcaaatttgatttttttggtg tGAAGCCTTAGCAGAAACGCCAAGAAAAGATAAATTTATTTTAGTTCTCA TAGATTAAATTCACTGAGAATTTTAtcgttttcattttattcaggTGGGC ACATCAACCCAGCCGTTTCTTTCGCCCTTGCTGTTTGTGGGCGTTTCAAA TGGCACAAAGTTCCAGTATACTGGATTGCCCAAATGTTGGGCGCTATCAT TGGTTCCGCCCTTGCTTTTGGTGTTTACCATGGTATGAAGGTTTTTAATT AGCGAAGATTTTTAACAAAGCTATATATTTCTCTTGATACTATTACTTGG CCTTCAATCtcaacaaaacacaaaagaaagtacacgctttttttataaga atggtgtttttttcaattcatcattggggaaaatcatcctgaaatattct tacagtattcttaggttaggatccaatCTAAGCCAAAATCCATGTGATAC AATACCTCAAGtgaaaatttggcatttttgtcgAACCTTTAAGCATTGCT GGGTAATAAGTGGCAATTTAATcgtaaaatgctctaaaattggcattctt aggttcagttaccaatttccatgatggtgatattcttaccatattcttaa ttttttggccaataaACATTCTTATAAgtatattattataaaaaaagcgt gtaataagTTTTAATCGAACCTCGGCAAACATCAATTCTTACTTCATTAT TCTTTTAGATTATTTGGTTGAATTTTCTGGTTCGGAACGTTTGACTTCTG GAGCTAACGGAACAGCTGGAATCTGGTCCACCTACCCACCTGATCACGTC TCTAACTGGACTGGTTTCGCTGATCAAGTAAGCATCCGTTTAGCTTTTGA GAAtattgaaaatcattaaaagtCAGTCTTTTCATGCaccgaaaacaaat ttttgttggAAGTAAATTAAAtaacttcttcatttttcttttgaccaata taAATAAGGTGGAAGcattgctcgaaaaagtgcgatcgaagcgcgtgTAA gtagagaccggcctttaagTTTATTGACTAATCAATACAAATATAACTCT AACGCCGATGGGGAGTCAGTAATTTCTAAAGTTATCGAGAGTTCAACTTT TATTCAtgatacccagctggcacacaacgttgttttaacgtttacctaac gttcacaacgtccatataacgttagatgaacgttaaaacaacgttgtgtg ccggctgggtatGTATGTACAACTAAAATGTCTTCCAACATTATATCACG GCCCCAACAGACATATTGACAGGTTTTACGTCATTTACAAccatcagctg ttgggtccttgatgtaatgtcagaagacattgcagtggtgcacaTCATGA AAAAGTGTGAAATATTCATGACTTTCTCAAGGAACAAGAAGAATTATTAG TTACGTAATAACTTTCATTACATTCacatttctttcctttcaaaGGTTTT GGGGACCGCTTTATTCGTGGGAACCATTTTCGCCCTTTTGGATTCGAAAA ACATTGGTGTTGGTAGCAACATTGCGCCATTTTTAATTGGTTTGATCGTC CTCACCATGGGAACAACTTTTGGTATCAACGCTGGATTTGGATTGAACCC TGCAAGAGATTTGGGACCAAGAATCTTTACCGCTATTGCTGGATGGGGTG GAACGCCTTTCTCGTAAGTATTCATACAATTTATAAAGAGCAGTATCTCT TACTTTGGTTGACCTGAGTCAGGGTCATATAAAATGACTATTGGCCTTAA ATTCTTCTGCACATTTTGACTTGTCTCTTTATTAAACTTTTTGCACAAAA CAAGAAATTATTGAAGTGTTCCGTATCTTTAGCTAAACAAGAATCTGTTT TAGGTATACTGCTGTAAGGAAATTGAATAAAATGCAATCgaattttctaa atatttttactAAATTCCTTCATATCACAGAGCTCACAATAACTGGTGGA TCTACCCTGTTCTCGGTCAACTTGTGGGCGGTGCTTTGGGTGGTTTGGCT TACGAATTGACAATCGCTATTCACCATGAAGTCGATGAAGAGGAAGCTTC TGTGGCGGAAGCGGGCGCTGATGTTGAACGCCAACCCGCCAGTGGTTCAA ACTCAAAAGAAGGTTCACCACGCCCTAAAGagtaaatttgaaatgaaaat gatgcgaaatttgttatttgaaatatttttttctgacacTCAAGTTCTAT GTTTGAGTTTgtgtcaaaaaaattacaatcgaATCCTTttgtaaaaagaa atttcaagtaTCTCTTTTCGTTGATTTGGAAGTGGCTCGGTGTGAAGTCC GCCAGGTTTGATTGATTGGCTCATTGATCGATTGATCTCGATTATGGTCT CGATTAGTTTCGATTGGTTTACAAAATCTGCTTTTTCATTACGCTGTATT CcaatattttgttgatttttttccaacctcaTCCCCGTGTATCCTAGGCT TTATTTATGTTACTGAAAGccgccagagaatattatctgcCGCTATCAGT AACCATAAAGAGCCGATAACGCACAGAGAGCGAGGTTggattttttcaat cttttctcTTTTCATATTGAATATTTAACATACTAAAAACCCGTTTCATT TGAAATGTATTTATTTCGAGAGGGAATTTTTCTATCAtctatatcataaa taaatttaaaGGAAATTGCACCAcaagttttaattttgaaaggATCAAGG GTTGTACGATGGGGTGGGTGAAGGTGGTAAGATGGGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006585TCONS_00006585Clytia hemisphaericatranscript
TCONS_00006586TCONS_00006586Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006586-proteinTCONS_00006586-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:285002..291639 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AQP9aquaporin-9 Homo Sapiens
AQP3aquaporin-3 Homo Sapiens
AQP7aquaporin-7 Homo Sapiens
LOC100509620PREDICTED: putative aquaporin-7-like protein 3 isoform X7 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.68 0.68 0.48 0.27 5.39 3.51 39.51 42.91 22.31 19.63 42.15 36.91 133.94 120.63 95.77 229.92 112.48 121.35 0.71 0.3 71.7 79.83 52.29 56.05 87.06 101.4 9.37 2.78 0.6 0.59