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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006504 ID=TCONS_00006504|Name=TCONS_00006504|organism=Clytia hemisphaerica|type=transcript|length=287bp
ATATANATGTCTTCAGTCAGTTTCGAGAAACTGTGAAAAGCAGACGTTTT
CTTCATCTTGTGGCTCAGagGTTTAGAAGCAACAACAATGCAAGGTACAG
ATGTGGAACTGGATCAGTTGACGCGACCTGTCAAACATGCTTTTCGTGAA
GAAGTCAATCTCTTCATACATGTTCACATGAGAGGTTATGATAAAAATGG
GGACGGTGTTCAAATGCATGCTGCGTATTATGACAAATATGGCGCCCCTA
TGAACAAAGAACGATCGTGGCTTCAGGGGTATGTACA Run BLAST on NCBI transcript from alignment at sc0000067:373128..374509- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006504 ID=TCONS_00006504|Name=TCONS_00006504|organism=Clytia hemisphaerica|type=transcript|length=1382bp|location=Sequence derived from alignment at sc0000067:373128..374509- (Clytia hemisphaerica)
ATATANATGTCTTCAGTCAGTTTCGAGAAACTGTGAAAAGCAGACGTTTT
CTTCATCTTGTGGCTCAGGTATGATTTATCTCATATTTTTTAATATACAC
AATTTCGCCTATTAATAATGGCTCAAAATAAATACTAATAAATTGTCGGG
TGTTGTATACCTCTGTTTCGGTGATGGCACTTTAGCGAGTGGGGGGATGA
CTGGGAGACATCCCCTGTCTCAATACCGTTGATATTTAATAATCGGTACC
TTATGGGAACAAATTTTCGTGGAACATATCCGTGACATATCCGCGAAATT
AAATTCCGCGAAATACAAATCTTTTCAGGTTTTAAAACATTAGCTCTAAA
ATTGGTCTTTTTAGGGCAAAATAAGCCATATTATGAACAAAAAATTCTCT
CAACCGCGAAATTAAATTCTACGAAAATTTGTTCCACGAAAATTTGTTCC
CACGGAAATTTCTTCCCTTGAAGTATTAGGGGTCAAATTGCCACTGAAAT
AATATAAAATATAAAATATTGGGGAATATAAAATTATCGGAATATCTGAA
TGGGATAAGATTGTAATGTGGCTCTTCATTTAAGAAAGATTTTAGCCTTT
CCAAGTGTGAGCGGGTCCCAACATGTCACTTCTGTGACACAAGATCTTAT
CAAGTTTCGCCCAACTTTTTTGATATTTTTTTAGAGGTTTAGAAGCAACA
ACAATGCAAGGTACAGATGTGGAACTGGATCAGTTGACGCGACCTGTCAA
ACATGCTTTTCGTGAAGAAGTCAATCTCTTCATACATGTTCACATGAGAG
GTAAGATCAAATGCACTTTTTTATAAGAACAATGAGGCTCAAAATTTTCC
AATAATAAGAACAAACATTGAGCCTGGAATTACTCAATAAAAAAGAGGTC
AAAATAGTAAAAATTGGGTATAAAGCCTGAAATACCCCAATTTTTTCCTA
AAAATGAATTTCTTGTAGAAAGGGGGGAAGTTTCAAAAAAGGGGGTGACT
CATCTAGAAAGGAGGGGTTAACGCGTTCTTTGAACCCATCTTTCTAAATT
TCTAGCTTTGAAGTCTTGAACTGGGTTAAAATCCTAAAAAGAACAGCAAA
TTGGACTTTATTAGTCAGAGCATTCGTTATACATTTTTATGGAAATTACA
ACAAAAAGAGTCTTCATTTAAAAGGTAGTAATTCTTTTGAGACAGATCAG
TATTGTTCTCACGATTTCTTTCTGAAGCTTGTTTTATAAAGTTTTGAATT
GTACCCAAAATTATTATTCTGTTTGATAGGTTATGATAAAAATGGGGACG
GTGTTCAAATGCATGCTGCGTATTATGACAAATATGGCGCCCCTATGAAC
AAAGAACGATCGTGGCTTCAGGGGTATGTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006504-exon-sc0000067-1575043694:374442..374509 | TCONS_00006504-exon-sc0000067-1575043694:374442..374509 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1575043694:373710..373825 | TCONS_00006504-exon-sc0000067-1575043694:373710..373825 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1575043694:373128..373230 | TCONS_00006504-exon-sc0000067-1575043694:373128..373230 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1510915933:374442..374509 | TCONS_00006504-exon-sc0000067-1510915933:374442..374509 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1510915933:373710..373825 | TCONS_00006504-exon-sc0000067-1510915933:373710..373825 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1510915933:373128..373230 | TCONS_00006504-exon-sc0000067-1510915933:373128..373230 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1491911889:374442..374509 | TCONS_00006504-exon-sc0000067-1491911889:374442..374509 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1491911889:373710..373825 | TCONS_00006504-exon-sc0000067-1491911889:373710..373825 | Clytia hemisphaerica | exon |
| TCONS_00006504-exon-sc0000067-1491911889:373128..373230 | TCONS_00006504-exon-sc0000067-1491911889:373128..373230 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067 | supercontig | sc0000067:373128..374509 - |
Blast
The following BLAST results are available for this feature:
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