TCONS_00006309 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006309
Unique NameTCONS_00006309
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length947

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006309 ID=TCONS_00006309|Name=TCONS_00006309|organism=Clytia hemisphaerica|type=transcript|length=947bp
CGGAGCATCATTTCAAAATGGCTACCTCAAGCGATGCATCACAGGCaaca
tttcagaaaaaaatatcaattcttTATGGCTCTCAAACTGGAACAGCAGA
AGATGTAGCTGAGAGAATTGGCAGAGAATCCAGAAGGAGACATCTTGAAA
CTACTGTTTCATCATTGGATGATTATACAATCGCCAATTTAATTCAAGAA
AATGTTGTGGTGTTTGTTGCTTCCACGACTGGACAAGGAGATCCTCCTGA
TAATATGAAGaaattcTGGAGATTTATTCTAAGGAAAGACTTACCAGGCA
GCTCTTTAAACGGCATCAATTTTGCAGTTTTAGGATTGGGTGACTCATCA
TATTTAAAatTCAATTTCATTGCAAAGAAACTGTGCAAAAGGCTACTACA
GCTGGGtggaaatcaaattttgaattctGGTTTGGCAGATGAACAACATC
CACTTGGGTTAGATGCTACAATCGACCCTTGGCTTGTGTCATTGTGGGAC
ATTGTTTTATCATTCTATCCTTTAGAACCGAATCAAAAGATCATACCACA
GAAACAACTGCTGGCTGCAAAATTCAAAGTGGAGGTTGTTGATGAAAATA
TCATTGTTGCGGATAATATTAACGATGTCAAACTTAACAGCAAAGGAGAT
GCTGTGAATGAGCACAACCCATGGACGTGTCATATCAACTCCAATGTAAA
AAAGACGGTTGAAAATCATTTCCAAGATGTCAGACTTCTATCGTTTGATC
TCACTGGGTCTGATCTAAAATATGTTCCAGGGGatgttttgatgattaaa
cCTAAGAACCGAAAAGAAGTTCtggaagaatttttcacacTGGTCAAATG
GAATCCTCAAACCAAAgttaaaatatctcaaaattgGCCTGGGGGAGTCG
GACGAGGAACAGTAAATTGGCTTCGCCACATGGAAGAGAGtttaaat
Run BLAST on NCBI

transcript from alignment at sc0000066:502137..522082-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006309 ID=TCONS_00006309|Name=TCONS_00006309|organism=Clytia hemisphaerica|type=transcript|length=19946bp|location=Sequence derived from alignment at sc0000066:502137..522082- (Clytia hemisphaerica)
CGGAGCATCATTTCAAAATGGCTACCTCAAGCGATGCATCACAGGCAACA
TTTCAGAAAAAAATATCAATTCTTTATGGCTCTCAAACTGGAACAGCAGA
AGATGTAGCTGAGAGAATTGGCAGAGAATCCAGAAGGAGACATCTTGAAA
CTACTGTTTCATCATTGGATGATTATACAATCGTAAGTATATACCTAAAC
AAACTTCAATGCACAAAAATATTTTCTTTGTTTTTGAAATATTTGAAAAT
TTCACACCTGCTGAAGTTTCTTTTTCATACAGAAGGTTATTGTACAGGAA
AGCTTTGTTTAAAAGTGCCATTTCTTTTACTTTTGGAAGAATCTACACAA
ACACTAAAGCCAGAAAAGCATGGCTCTATAAATCTAAACCATCAGTCAAG
CTTAAACTCTAACCATATATATTATTTATATATTTAAATACTTTTCTTTT
TTCTAAAATGACAGATATTACATATCTTCACTATATATATATTAGGATTA
GAAACTAGACTAGTCTTACCTTTTTTATCTTTCCCTTAACAACAATACAA
TAATGCTGACAAGTTGTGACCCAGTATGGATTCCACAAAATCTCGCGCCG
AAGATATTTTTCCGTACAGCAAGCCTCACGCCAAGCAAAATTTCTTTTGT
ACCAACATTCAATTTTTCAATAAGGGTGCAAGATGGGAAAAGAGGCGGAT
GCACCAACATATTAATAAATTGACGCAAGCGTAAGTGAGCAAAAGCAAAT
TTAGCCAAATGAAAGCTAAAAATCAATGGATTATGGAGTCATTCACGCCA
AGCTGGAATTATTACTTTACGCCAACTGAAAATCAAACANNNNNNNNNNN
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TTTCTGAAAGCCTATGATCAGGGCTACATGATGAGCTGGTCGACGTTTTA
ATTTTTTACTGTCATTAATAATGCTGACGTCATCGAAGTCGCCATTTTTT
GGACTTTTTTTTTAATCTTGGGCACTTTTAACAGCACCCGACATGTAACA
AAATTAGGAATTTTAGCACCCGACTGTTGGGTGCGCTATTGTCGGGTGTT
TTTGCAAATTTAGAAATTTCAGCATCCAACAAAACACCCGACAGCACCCG
ACTGTCGGGTGCACCGGCAGGGTCGTTTCCATACTACTGATTTGACAGTA
TTTGAGCATTATCTTTTTGTGGTTAAAAAGGTGTCTCTATAGTTTGCTCC
AGAGGCTTTAATATGTCATTTATTGAACTAAAGGCTGTATTGTATTGAAC
TGAAAATCTTCATACTAATCAAGTTTTTCAAGCTTATTAAATGAAATCCT
AATGTGTTGGACTTAATGCTGCACAATTCAGGTCAAGGCTTTGTGAAAAA
AAAATTGGCTTTTTCAAGACTTTTGCCCTAAAATTCAGGGCTGTTTATGG
TCAATATTAGGGGACATTCTAAATTCCTTGTCCTTAGTGTCATACTTAGT
ATACAGAATGAAGTATTAGTTACATTTGCATGGTCATTCTGTATCTAGAT
TTTTCATATGAAAAATGTGATTTTTATATTCTAATTCCCTATTTTTTTGG
AATTGTAAAAACACCAACCACTTTCCCACCACTGAGATCTGTTGGATAGC
TACGATTTGATCCAGCCTTTCTTCTAATAGTGATTTGATTTCGAAATGAT
AGAACAAAATTTTCTAAACCCATGTGTTTTCAGATAAAGTTCTGTTATTA
TCAAAGTGTTCCAAGATTTTGACTCTGAATGATGTACTGCATAAATTTGC
AAGTGATAGACGTTAAACTGATTGTTCTGTATTCTAAAGCTTTGGATTGA
TCACATAGTTTCCTACATTGAGTGGGATGTCAGATTTTAATGAAACCCAG
ACAAGAGTGGTATTGAAATGCTGAATTTCCTAAGGGGGCTGCCAGTTAGG
AGGGAAGGAAAAATGCTGCAACATGACATTTTTGCATACCGCTTCAGCCA
GCCTGCAGACCAAAATAATCGCAGTAGTTTGGAGGCTTCAAAAGTTACCC
GTTACCCATAAAAGTAACCCCAATTGTCACTTCATCAGAAATTTGTACAG
CTTTTGTTGATATTGTATTATAAGCAAATGTGATATTTCACCCTAGAATT
TGAATCTTTGCAAGCTTTTTTTGGTTTTTTTGATAATATTGAGGTTCACA
CCTTTAAGGAAATTTTACTTGATATATGGGTAATCAGAAGGTCTTATATA
GTACAAATAGTGGAGAAGACATCCTTGCCTTGCCCGATGATTGGCAAAAA
GATGCTGATTGAGATAAAATTATTAAACTTTATTATTTAAAAAACTTTAT
TTTCGGCAATATTTCACAGAAAACCAGGAAATTAGGGGATATTTTGCCTG
TTCTACTCATTTGTTAATGGGAAAATCAGGGAATTATTTTGCGAGATAGG
TAAAAGCTCTACGAGTTCAAGTAAATGCAATAGAAGGCGGGAGCAAATCT
TGAAAAAGCAGGAATCGTTTAGAAAAAATTGAAAGAAATTGTTGAAATGT
GGGAGTCTGCCTAATTGGAGAGAGTTGACAGCTATGAATTCTTTATATCT
AGTTCGTTCATTTTCATGTATTTATTCAGTTTTATTGCCTCTCACATATA
ACATTCAGAATGATATTTATAATATTTTTGAGCTTCACAAACCTTTTGAG
CTTGATTCGTGCCTACGTTTTATCACTTGTGAACTGTTTTGAAAAAATGT
TTTATTGTAACCAAGTTTTTGTGCCTTTCATTTTTGTGCACAAAGCAAAT
TATATTTGTGTGTATCAATTTTGTGAACCAATTAATCAATTTTGGTATCA
ATTTTTGCGCATGATTCTTTTCTTTTCAAAAATCATCACGTTCACGCACA
ATTTTCCAGAGGGTTTAAAAAAAATTTAGTATTAATTTTTACCCACCCAA
CTTAAGATTTTGTGTAATTTTCTTTGTGCAAGAATGCATGAAAATTAAAA
GTTGACAACATCGATCCCTTGCTGTTATTTTTTTATTTTCCTTCTTTATT
TCAAGGCCAATTTAATTCAAGAAAATGTTGTGGTGTTTGTTGCTTCCACG
ACTGGACAAGGAGATCCTCCTGATAATATGAAGGTAAACATAAAACCTTT
TGCTGCTCTCCTTGTTACAAAGATAATGCAATTGGAAAGTGATTACATGG
ATTAGTAATTCATCAGTAACAGTCCTCGTTATTTAATTGTTTACAAGTTT
GCTAGCAATGAAGCTGGACTTTCAAAAAGTTACAGTTATAGTAAAAATTA
CTTCTTTTTTTACTGATATAAATACCCCATACCCCAGGTATGATTGCACA
TGTTTTGTTTTATTTTATTTTATATACCTAGTTGTCTCTTAAATTCTTTC
AAATCCAATACCGCTAAGAAACTGCTGTTGTTTACGTTCATTTTCAAAAT
TTTGTTGTGATGTTGTTTTAAATTCATATTTCATTGAGAAAAATTTTTTG
GTTGGTTGAAAGTTTTTGAAAGGAAATTAATTTAACTTTTTTTTTCTTTT
TTCTTTTTAGAAATTCTGGAGATTTATTCTAAGGAAAGACTTACCAGGCA
GCTCTTTAAACGGCATCAATTTTGCAGTTTTAGGATTGGGTGACTCATCA
TATTTAAAGTAAGTCTTTTTTTTTAAGCCATCCTATCCTATGTTGCTTCA
TTATAAAAAGATTGAATTTTAAAGAAGGACAAAAAAGCAAAGCCTGCCCA
TTTGTGTTTGGTTCTTAAAAAGTAAAAAAAAATGTACATTTTAGCAAAAT
GGGCTGACCCAATTTGTTTTGTTGATTGTTATTATACTGTGATTTTTATA
TTTTGAAATATTTAGATTCAATTTCATTGCAAAGAAACTGTGCAAAAGGC
TACTACAGCTGGGTGGAAATCAAATTTTGAATTCTGGTTTGGCAGATGAA
CAACATCCACTTGGGTAAGAAATTCATTTAACCTCATGGATGTATTATGC
AAAAATTATACATATATTGAGTTAACAGTCTTTAGGGAAAGGTTTTATCC
ATGATTTTATCTCTTTAAATACCGATTCATACTGAAGTTTGTTTCCCAGT
GACATAGTTTAAATCAAACTATTTTATTTAATATTTTCTCCTTCAGGTTA
GATGCTACAATCGACCCTTGGCTTGTGTCATTGTGGGACATTGTTTTATC
ATTCTATCCTTTAGAACCGAATCAAAAGATCATACCACAGAAACAACTGT
ATGAATAAACCCTTTTTAAAACTTTTACCTCTATTTAAAATATCAAAGCT
TCCTCTTATACTTCTTGAACCTGAACACAGTTTAACTTCACCGTTTTACG
GGCCACCTAAAAAAGAGGGTCGGTCGGACGGCCTTCGAAATTCGGTTACA
AGTTCAGGGATGCGAGCTGTGAATATTGAAAATGTAAATTTTTGAAATCT
CATTATTTGGTACCCTGAAGATCATGGCTTTGAAATACAGTTAGTAATCG
ACTTTCAAAGATTTTCGATTTGACCCCACGAATAAAAGTGAAACCCATTG
AAATTGAATTCAGAAATGAAACACATAATTCTTTGTTTTTAGGCTGGCTG
CAAAATTCAAAGTGGAGGTTGTTGATGAAAATATCATTGTTGCGGATAAT
ATTAACGATGTCAAACTTAACAGCAAAGGTATAGGTCGTTTCACGGTCTT
AATGAACTAGCTCAGTGAGGGGTCAAGGATCAGAGTTTTCCTGTCTTTTC
ATTAAAAGCGAGTAAAAGTATGGTTTTTATTGGCCAGCGCTAAACAGCCC
TTGGTGAAACTTTAAACCTCTAAAGCTAAGGCTACACTGATAATTTTTCT
GGCGGCTGGAATGCGATTTATTTGCATTGCATTGCAAGCGCGCGACAAAT
TGCAAAGTGTGGCACGTCAATTTTTTCTGCAACCGCTCTGCAACGCAATA
AGAATATTGCAGTACAAATTGCAAGTGCTTGCAGCAAAGAAGATTCTGCA
ATTTTTTTTCATGATGTCATCAAGCGTTTGACATTCCGATGGCAAAAAAG
CGGAAAACAACATAAGTCAATTTTTCTAGTGTTATACATTCTCCTCGGGG
AGTATCTTGTTTTTGTAGACCTTCCTTCATTTGATCAACTAAGTACAAAA
AAATTCTCATTCTGCATACGAATGTAATCACGACACCTCTTAGTCTTAGG
ATCATGTCTAATTTCCTGAAAGATCGTATGTAAAGCTCCAATTTTTTTCT
TTTGGCTAGACATGGCTGGATCCAATATATTTTCTTTCAATTTCTTCATC
TTCAAGTTCTTCAAGGCAGCAGTGTAATGCATGATGGTTTTAATATATAA
ATGGTCAAAAATTTAACTCATTCAGCGTCTTTTGTGTCATTTTATTCAGT
CCTTTGTTTCTTGGTCTCACGTCACTTTTCTGTTCAGTCTCTTGACAATT
AATTCTACGCTGTCATTTTAGTTCTTTTGTATAATTTTTGTCATATAATT
AGTTTATTCACACTTAGGCAATTATCTAGTATTTTCAATTTTTGTTCAAG
TACGCATATTTTTCTCTCGATTTTCATGAATCATCAATCAAGCTATGAGA
AGCTTTGTGTGTGGTTGCATCAAAATATGGAGTTTCAGACTTAAACAGTT
TTGGTCTTAAATCAAATTCAATTCTCAACTTTCAACTTTTGTGCACAGTT
TTTCACAGTTTTCACATACTGGCTACCTGGTATGTTGTCTTCTGCTTTTT
GCCTTTGCCTCTCTGTGTTTTTCTGTTCATCAGCCTATTTGGCTCAGGTG
TCTGGAATTAGATTATTTTTCATATTTTTAAATCAATTTCTTTAAGCTTA
GGTTTCATTAATTTTGGTATATTTCAAGAGATTTCTTGTGCGATTTTCAT
GATACTTTTAAGGTCAATTTGATCAATTTCCTCAAGATTTCTAGTCAATT
TCAATTTTCTTGTCATTTTTCTAGTCATATTTCGTCACTTAGTTTTGTCA
TTATTTTTAATTTTCAGTTTGAACAATCGTATTCACTTCAATCGAAGTTC
CAAACTGTGTCAGTTTATTTCCGTNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNAAAATCAAACGATAACAAACCAAAG
GATCCATCCAAACAAACCAGGGATAAGAGGTATGGACATTTTTCGAATTC
TTATATGTCCTCTGATACCTCGAATCCTGTGTGTGCCCTTTGTGAAACCC
CAGCTGGTGAAAACGATCATGTTGCCTCATCAGGCCCAGGTAGAACAAAG
CTGGTTCAATACTACACTTGTCAGAAATTTGCAGAACTCACACCTGCAAG
TCGACTCTCCCTTCTCAAAGACAAGGGATACTGTTTTCAATGTCTCTTTC
CAGGTGCAGCATCCGCATCTGGAAAGCATAAAGATGGAAAATGTCAGCAT
GATTTCGTATGTCCCAACGCTTCACATCGAAAGTATCCTGTTCGAAAGCA
CGTCTTGGTCTGCGAGGAGCATAAAGAGGAACCAGCCAATATCGAGCTGC
TGGAAAAATTCAAAGAACGATTCTTCCGAAGTCCAAGTCTTCCAAGCTTT
ACAAGAAATATAAGCTTGTCATTCCACACAGCATCCTTCAAAGCAAACGA
TCAACATGGAGACAGGGGTATCTACATGCTGCAAGAAGTTCTCATCAATC
AACACAAATTACTTATCTTTTACGACAGTGGCTGNACATCGTCGGGATAT
AGTTTAAACGATCTTCTCGCTAAAGGGAGGAATACCCTCAACAGGCTTCA
GGAAGTCTTGATCCGATTCTTCATTCACCCTATCGCTATGCACACAGATA
TCAAGAAGATGTATAACACCATCAAATTGGACGAATCTCATTGGTGCTAT
CAACGCTACGTTTGGGAAGCCAACCTTGACCCATCCAAAATCCCTCAAGA
AAAAGTCGTCAAGACCCTGATATACGGGGTTAAGTCTTCAGGAAACCAAG
CTGAATACGGTCTTCGAAGAGTAGCTGAAATGTCAAAGGATGATTACCCC
GAAATCGAAGAGATCGTCAAACGTGATATTTACGTCGATGATTGCCTCAC
CGGCGAACAAGACAGACAAACAGCCTATATTCGTGCAGATCAACTCGAAC
GTGTCATCAGTCGAGGTGGATTCAATCTCAAGGGATTCGTATTCTCAGGT
GAAGACCCTCCACCCACCATGAGTGAAGACGGAGAGATGATTCACATCGC
TGGATTCAAGTGGTACGTTAAATCAGATATGGTTTCGCTCAACATCGGTG
ACCTGAACTTCGCGAAGAAGTCTCGCGGAAAGAAGCCATCAAACCAAGTC
AACGTCATTCCTTCCAAATTAACACGTCGTCATTGTGCTTCAAAAGTGGC
CGAGATGTTCGATCTAACCGGCAAAGTTTCACCTCTAGTCGCATCCATGA
AGATCGACCTTCAAGACCTAGTCCAACGCAAACTGGATTGGGACGATGTT
ATACCAGAAACACTCAGACCATTGTGGGAATCAAACTTTCAACTCATCCA
AGAAGCTGGCAACCTCAGATTTAATCGTGCAGTGGTACCTGTAGATGCTG
TCAACCTAACCATGGAAACTCTTGACTTCGGAGATGCAAGTTCGTCTATG
GTTTGTGTCGCTATCTACGCTCGTTTTCTCAGAACCAACGGTGAATACTC
ATGTCAACTCATCTTCTCACGAACCAGAGCAGTACCAAAAGGGATGTCAC
AACCAAGAGGAGAACTCTATGCTGCTCTCATCAATACCCACACCGGAGAA
ATCGTGAAGAGATCACTCAGCAAATGGCACCAATCTTCGATGAAATTCAC
GGACAGTCAAATCGTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTCATATTTCGTCACTTAGTTTTGTCATTATTTTTAATTTTCAGTTTGAA
CAATCGTATTCACTTCAATCGAAGTTCCAAACTGTGTCAGTTTATTCCTG
TGCACAACAAGCAGTAGCAGATTTTCTTTGAGCCTCCATCTCGCGCTTGG
ATAGAAAATGTCCCTTGAAATAACATTCGAATGTTTTAAAGTATATTCAA
ATGTTTTGAAGATTCGAATGTTTTTTTTTTCGAAATACTTCCTGGTTCCT
TCTTTTAGATAGAAAAATCATCAGCTTAATCCCTTTGAAGCAACTTGTAG
AACAAAAACTTCTTTATTCTTTCTACATACTATGCAAGATCTTTCCAATA
TATTCGTTTATCTTTGATTTTCTTGGACAAACTTTAGGAGATGCTGTGAA
TGAGCACAACCCATGGACGTGTCATATCAACTCCAATGTAAAAAAGACGG
TTGAAAATCATTTCCAAGATGTCAGACTTCTATCGTTTGATCTCACTGGG
TCTGATCTAAAGTTAGTAAAAGGAACTGTTTTTCACTACTCGCGAGCAGA
CATCAAAAGCAGGTTTTTTATTGAGAAGTTGAACGCTTTGTCCTGGATCG
TGGATTCTCCATTAGAAGATTGGTCATAGTTCTTCAAACCTAAGTTTTAA
TTATTATTACACTATAATTTCCAAAATACTCTTCATTTTTCAGATATGTT
CCAGGGGATGTTTTGATGATTAAACCTAAGAACCGAAAAGAAGTTCTGGA
AGAATTTTTCACACTGGTCAAATGGAATCCTCAAACCAAAGTTAAAATAT
CTCAAAATTGGCCTGGTGAGTGTTTCAGTTTATTTGTTTTAATTCTTTTA
AATCTTTGTTTAATATTAAATTACGGTATATATAAGATATAGGTTACATT
TATAAGTTTTGGTGTTTCGTCTTACTTCCGAGCCTTCAAGGGGCTGAACG
TGTTGGAAGCCATAGTGTGCAAGGGGGTTCCAGGTCCCACCTAAAAATTC
AGGTCCCACCTAACCCTAAATTTCCCACCTCCAATCCAGACTCCCAGATC
CCAGCTAAAACTACTATCCCCATGAAAAATTATACTAATACGAAGAAGGT
AAACAAAAATTATTGTCCATGATAGGAAGATGCTAACGTATTACAAACAC
ATATTGCCATGCTAATGCTTATATATTGCCAAACACTGCAATGGTTGTAT
TTAATTTGTTTTCGACAATACAATTGGCTTCTCAAAATAAGAAAGGGTAA
AAGAAAACATTCTGGAAAATATTTCCTGATATAGGGGGGTGGATACTAAA
ATCTAGGATATCATGATGTTTAGTGATGTGGTGGTATACCCAAAACACTT
TAAAATTCTTTTAGTACCATTTGGGTATTAAAATACAAAAAAGGTGATAT
CCAGACTAAAATTTCAGAATTTTTTTAGTTGGTTGGTACTAAAAGTAGTA
ATTTTATATATTTGATAGATTTTTACACTCTGAAGATGACCTCTTTTTGT
GTAGGTCGAATATACAGTTTTTAAATAAAAAACATGACGCTTCTGGTTAT
TCTTTTTTACCATTAAATTATTAGCCCAAGGAAATATCTTTCAATAATCT
TTTTATGATTTTTTAAGAATTTTTGCAATTTTTCGAAAAATAAAAATATT
CTCATTATAAGAAAATTCCCATGTTCAATTATGCTTGCATTCAATCAAAT
ATCTTTAATGTTTCCTCAATTCAGAAGCAGCATTGTTTAATAGATTTTTG
TGGAAAATAGATATCATCTTGCATAAAATCAGCATTCGCGAGGAAAATGG
TTCTGAGAAGACAAAATTTGTCTCGAAAATACCAAAATTGGGTGGTCTTT
GTGTCCTAGTGTCTTTAAAATATTTAGTGCAAGGACTGACAAGGGTACTA
AAATACCACTTGTCAAAATTAAGGTGGTGGTATACAAGAAATTCTCCAAA
ATACTTTAGTATGATTCATATTATGACCGAGATTTTAGTACTGATNTTTA
AAATATTTAATGCAAGGACTGGCAAGGGTACTAAAATACCACTTGTCAAA
ATTAAGGTGGTGGTATACAAAAAGTTCTCCAAAATACCTTAGTATGATTC
ATATTATGACCGAGATTTTGGTACTGATCCCTCCCCCTGAATAAATTACA
GTATAATAATAAGAAAGGGAAAAGCTTAGGACAGTAAAAAAATTATTTAT
AAAATATAACAGAGATAAGAAAAAATTAACTTTCACATTCACCAAAACAC
CAAAACTCCCACCTAAAGAAATTAACTCCCACCCTAACTTATTTCTCCCA
CCTAGAACCTGAAAATTTCCAAATCCCACCTAGAAATTTCCGACCCAAAA
CAGCAAAACTCCCCCCACTATTCTGGGGGGGGTGCGCACTATGGAAGCCG
TCTCGTATGAAGTACATTTCCCGTCGTTTCATTCCTAGCCAATCAGATTT
CTTTCGTTTATCCATAATTTCTTTTTTCACTACTATCGTCAAAGAATTAG
TTTCATTCTTTGTGACAAAAATTCACGTGAAGTACCTTGTTAACCAATAA
GATTTCATCATTTCGACAGGGAAAACTATGGTTTAACTCACTAAAAATTA
CAGTAAACCATATTAGTGCTCGATATTCACTCAGTTTTGGTGTAGCAAAA
AAAATTAATAATAACTGAATAGAGCATAGACTAAAGTCTGTTCACGATAA
GTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAAT
CTTTATAAGTTTGGTATCATTGGAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAATGATACCAAATTTATAAAGAT
TGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCACACTT
ATCGTGAATAGACTTTAGATTACGATTCACGTGAAATTGAATGCATGAAT
TTCAATGTGGTTACACCCTAATCAGAATTTATGCTTTCTATGTATTCCAA
AATGTATCCGACTAAAAAACAATATACTAGTAAAAGTTAGTGTGAATTCA
CTTTTGTCTCACTAAACAATTTAGTCTTAAAATATACAATTTCTTTTTTG
TTATTTTGTCTTATAAGCATAACGTTTATAAGCATACTTAGGCTCAATTT
CGGTAAAAGAATAAGCAAAATGCTAAGCATACCTCCAAGCTGAAATGCAA
AAAAATCGTGCAGCTTTTCTAAAACGCTGACGTTTTTAGGGTTACTTTTA
AAGCTGTTTGAGCTTTCTTAGACCAAAGATTTTCGCCTGCAGCGCCAAAT
TACAAGAAAAAGTTCATTCTTTGAACCGAATTAATGTTTAAACTTAAAAA
TTCGAAATTCATGAACACAAAGAAAATCAACAAATTGAGGTCTAAGCCTA
AAAAATAAGCATAAATTAAGGTTAAAATGAGATTTTGCTAAGCATATTGA
GCCTCGACCCGATTTTCCCGTATCCTTATAAAACAAAAAAAGTGTACACG
TTTTTTTAAGAACAAACTTTATAAGAACAAAAGGCTTCGATGGCCAAAAT
ATTAAGAACAAGGTAAGAACATTTTAACTTTGTAAACTCTAAACACCCGA
TTTCTCAGAAAAATGGACAATGCTCGGAAAATGTTCAAAATAAGAACATG
TGTAGAACATTAAACCTCAAAAAGTTCGGAACATCCAAACATTTTGGATG
ATCTTATAAAAAAACGTGTATGCACTTAAAACATAAATATATCAAAATCA
CAAGAACAACCTACCACACCTCCAAAAAATAGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTCCGTTCGTTCGTTCGTTCGTTACCAGCTTTTCTCA
GGATTGATTCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATTT
GTGCAAATTTGGGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACTTTG
TGCATAATCCTGTCATTATTTTTTTCTGATTTTTTGTACAAAGATGGAGG
GCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTTA
TTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGAAATTCCCTTT
AACCAAATAAGAAAATATAGCTTTTCTCAAAGTTGACTCGTTATTTTTTT
CTGATTTTTTGCATAATGATGCAAAATGGCAATGCCTGTGACGGAGCCCG
ATTTTCGAAAAAAAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAA
AAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTG
ATTTTTTGTACGAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGT
GGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAGACGGATTTTCGTATT
TTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGT
TGACTCATTTTTTTCTGAATTTTTGCACAATGATGCAAAATGGCAATGCC
CAAAATGTGACGGAGCCAGATTTTTAAGGAAAATTTTTTTGGGCAAATTT
GGGCCAAAAGCACCTCAAAAGGTTTTTTGGGCCTGAATGGTTTGAGTGAT
TTTCGTATTTGGGGAAATTCCTTTTTACCATTTTACAGTATTCAACACAC
AAGCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTTTT
CTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGC
TTGTTTTTCCCTGAATTTCTTTTATTCAGAATTGAATAATCGAGACATGA
AAAATGACTATATTGTAATCTGTTTTCAATGAATAATCTAAAATGTACTG
GAGATGAAATGTAGGCGTTAATAATGTCCGCGCTCTTTCTCGAGCGTGAT
GCGTGATGGAAGGCGGTCGTTTCAGTGTGGTTTACATCCACACTGTGACC
AGGTATAAAATATCATTTAGTCACAAAAGTTGCATGGCTTCTCCAAAATC
TGAAAAAATAAGTTAAAAAATTTTCATATTTAAAAATTCACCTTTCTAGA
CGAGGAGTTAAATACATATGGGGGGGGGGTCACACTGGAAAATTAAAGCA
TGCTTTATTTTGTTGTCAGAAACAAGTGATTAAAGCAGAAAATTTATATG
TGACCGCTTCAAGCTATATAATAGCTTGTAAATTATAGAAAAACCTCATT
TAAGTACGTCTTTTTATCATAAAGTTTTTGTTTTAAATTTTTCACTCTAT
ATAATTCAACATTTTATTCAGTCCAAAAAAATTGATTAAATTTGTCAGTT
TTTATCATTTAATCATGGCAACAACCTGGGAATAAAGTCGACTCTCTCTT
TTTCGAATTTTTCTTGTAGCCATAATTTTTTATCTGCAATAGTGATTAAA
GCAGAAAATTTATATGTGACCGCTTCATGCTTCCATTTTTATTGAATTTC
TTCACCTCTTCCTCACCTTATTTTCCGGTGTGACCCCCCCCCCCCCCCTA
AAATCTAGTTGGTTAGGAACAAGGAAAAAAGTTAACTTTTGTGTAAACCC
AGTATGAAGTCAAACACATTGGATACACTTTTTTTGTAAGAACAATGATG
TGCAAAAACGTCTAATGACTGAGTTTTAAGCAAGTTTAAAGGTTAAAGTA
GTACAGAATTGGATATAAAGCATAAATATTTCAATTCTGACATATAAAAG
AGAACAGGTTAAAAACAATTTAAGAATCAGAGTGCCCAATGCATAAGAAC
AGTCGAGCCTCAATAAAAATTTACTGGTTCTTATAAAAACGTTTTTGGTC
TGACATAAAGTATGTATCTGATATGAAACGGGAACAAGAACGAAAGGAAT
ATGTATTCAAATTTAAAATCTTTCAATGAAAATTGTAGTAATACACTTGG
TAAAAGAATAAGTACAAGAAAAGTAGAAAATGGTTCAAAAAATGTATTTC
AACATTTTTTCTGTACACAGCAACAGCAGGCGCATGAACAAATGATAACC
AAAACTCCCACAGCTATTCCAAATCCCACTCCAATCTTGTACTCAGTTGT
TTCATCACCACTATCTTCATTGTCATTGTTTCGCCTCACCCTTGATGCAA
TCAACTCCTCTTCATCATTTTCGTTTGAATCTTTAATCTCCTCTTCTAAT
TGGTTTAAATTTCTCTGGCGTCCGATTCTTCTTAATGGCTCAATGTTTGT
TTGGATGTCTTCTTTGATTGGTTCATTTGATATCGAATGCTCCGAAACTT
TCCTGGTCAAAACGACTTGCCAAAAGTTGAAAACACTTATTGCAATAAAA
ATGCTCAAGAAAAGTCTCGACATTTTCTGAGCTGTTTCCCCTCCGTATCA
AGTTTGTACTCGAAGATGATTTTTTTATTTTGAACATTTTTTTTTAATAT
TCTATGATGCTGAGTAACCTTTAAAGAATCCTGTTTTTAGGGGGAGTCGG
ACGAGGAACAGTAAATTGGCTTCGCCACATGGAAGAGAGTTTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003601XLOC_003601Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006309-exon-sc0000066-1575043694:521901..522082TCONS_00006309-exon-sc0000066-1575043694:521901..522082Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:517800..517877TCONS_00006309-exon-sc0000066-1575043694:517800..517877Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:517275..517372TCONS_00006309-exon-sc0000066-1575043694:517275..517372Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:516969..517067TCONS_00006309-exon-sc0000066-1575043694:516969..517067Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:516685..516786TCONS_00006309-exon-sc0000066-1575043694:516685..516786Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:516255..516340TCONS_00006309-exon-sc0000066-1575043694:516255..516340Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:508422..508545TCONS_00006309-exon-sc0000066-1575043694:508422..508545Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:508118..508239TCONS_00006309-exon-sc0000066-1575043694:508118..508239Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1575043694:502137..502192TCONS_00006309-exon-sc0000066-1575043694:502137..502192Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:521901..522082TCONS_00006309-exon-sc0000066-1510915933:521901..522082Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:517800..517877TCONS_00006309-exon-sc0000066-1510915933:517800..517877Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:517275..517372TCONS_00006309-exon-sc0000066-1510915933:517275..517372Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:516969..517067TCONS_00006309-exon-sc0000066-1510915933:516969..517067Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:516685..516786TCONS_00006309-exon-sc0000066-1510915933:516685..516786Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:516255..516340TCONS_00006309-exon-sc0000066-1510915933:516255..516340Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:508422..508545TCONS_00006309-exon-sc0000066-1510915933:508422..508545Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:508118..508239TCONS_00006309-exon-sc0000066-1510915933:508118..508239Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1510915933:502137..502192TCONS_00006309-exon-sc0000066-1510915933:502137..502192Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:521901..522082TCONS_00006309-exon-sc0000066-1491911889:521901..522082Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:517800..517877TCONS_00006309-exon-sc0000066-1491911889:517800..517877Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:517275..517372TCONS_00006309-exon-sc0000066-1491911889:517275..517372Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:516969..517067TCONS_00006309-exon-sc0000066-1491911889:516969..517067Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:516685..516786TCONS_00006309-exon-sc0000066-1491911889:516685..516786Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:516255..516340TCONS_00006309-exon-sc0000066-1491911889:516255..516340Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:508422..508545TCONS_00006309-exon-sc0000066-1491911889:508422..508545Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:508118..508239TCONS_00006309-exon-sc0000066-1491911889:508118..508239Clytia hemisphaericaexon
TCONS_00006309-exon-sc0000066-1491911889:502137..502192TCONS_00006309-exon-sc0000066-1491911889:502137..502192Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:502137..522082 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.09848	4.42314	3.36391	5.90388	5.23004	4.64475	3.86421	3.23586	2.23499	0.521237	0	0.778366	0.359267	0	0	1.48446	0	0.710018	0	0	0	0	0	2.51665	0.383474	0.43604	1.33486	0	2.4565	0.738734
Blast
[Close]
BLAST of TCONS_00006309 vs. Swiss-Prot (Human)
Match: NDOR1 (NADPH-dependent diflavin oxidoreductase 1 OS=Homo sapiens GN=NDOR1 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.708e-75
Identity = 130/266 (48.87%), Postives = 175/266 (65.79%), Query Frame = 3 
Query:   60 KISILYGSQTGTAEDVAERIGRESRRRHLETTVSSLDDYTIANLIQENVVVFVASTTGQGDPPDNMKKFWRFILRKDLPGSSLNGINFAVLGLGDSSYLKFNFIAKKLCKRLLQLGGNQILNSGLADEQHPLGLDATIDPWLVSLWDIVLSFYPLEPNQKIIPQKQLLAAKFKVEVVDENIIVADNINDVKLNSKGDAVNEHNPWTCHINSNVKKTVENHFQDVRLLSFDLTGSDLKYVPGDVLMIKPKNRKEVLEEFFTLVKWNP 857
            ++ +L+GSQTGTA+DV+ER+GRE+RRR L   V +LD Y + NLI E +V+FV +TTGQGDPPDNMK FWRFI RK+LP ++L  ++FAVLGLGDSSY KFNF+AKKL +RLLQLGG+ +L   L D+QH LG DA +DPWL  LWD VL  YP  P    IP    L +KF +  + E          V      +  +E  P+   + SN + T  +HFQDVRL+ FD+ GS + +  GDV++I+P N    ++ F  ++  +P
Sbjct:    5 QLLVLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPPDNMKNFWRFIFRKNLPSTALCQMDFAVLGLGDSSYAKFNFVAKKLHRRLLQLGGSALLPVCLGDDQHELGPDAAVDPWLRDLWDRVLGLYPPPPGLTEIPPGVPLPSKFTLLFLQEAPSTGSEGQRVAHPGSQEPPSESKPFLAPMISNQRVTGPSHFQDVRLIEFDILGSGISFAAGDVVLIQPSNSAAHVQRFCQVLGLDP 270
The following BLAST results are available for this feature:
BLAST of TCONS_00006309 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDOR11.708e-7548.87NADPH-dependent diflavin oxidoreductase 1 OS=Homo ... [more]
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