TCONS_00006303 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006303
Unique NameTCONS_00006303
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3379

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006303 ID=TCONS_00006303|Name=TCONS_00006303|organism=Clytia hemisphaerica|type=transcript|length=3379bp
TTCGTTCTACATTTAGTACAAGATTAAGATTGTGGTGATTGCAACTGATA
TATCCAAGATAACGATAGACAGGATTTACTGAGAAAGTATCAGAATTCAC
CGAACAATTTTTGAGGAGTTATTGAGCAATTTCGTGAAATTAGAAATCAA
AAAGGAAGATAAAGATGCCTGATCAATTACAATAAATACTGTTAAGGTTG
ATTATATGTGAATGATAAGTTATTGGGTAGAACTGAAGACTGATTGGATA
TCTTATGGTGTATTCAACGAGAAAGACAgatcaaaaacttgaaaataagG
CAGACAAGTTTCATGGgattgaaagttgaaatttatCATTTACAGTAATC
AAGGAAAATACAGTATTGTTGGAAGAAAGTTGAAACATTAAAATCAGTAG
CTAGAGGTGGGCATAACCTTTCAAAAAATTAGGTCACTGCGCCTGCTCAT
TGTTTATGATGCGTCTTGGTTTTTCAGttcaaacaatttcaaaaagttct
gAAGCTAGGTAACAGTCACCAAGATGCAGAGTAGGTCAAAAAGGAGCTGA
CCAGATTAAGCGATTCCGGTAGAATAGGAAAATAGTAACGAAAGGAAATC
TTCTCAAATCTTGGCGGctaccaaaaaagaaaaagaaggataAAAAAGCT
TTCAGAAAATGATGATGACAGAAAAGTTgttcagaaaaaaaaagttaatt
aaatTTCCTTTTGAAAGACAGGATACAACAgcaattataattttgaaaag
agATATTGTGAACAATAAAGAACAAAAGACGTGAAAGTCATTAGTATTTA
ATCACCTCCTCAttataacaaaaaaatgaaagaataatATAAGAGGCTAC
CACTGGTCATCTGATGATACCAAGGGGAGATCTAGTATTACATAAAAATT
AATCACCATTTATTCTATCCTGTTCTTCTatttattgtttttcaaaaaag
aaaagaatatttgtTCTTGCATCAATAATGGAACACCATGACTAATACCA
ATTCGCAATGCAATAGTTTCCTGTGGTTGTGCTTCACTTTCAATTGATTT
GTTTCTTTGCGTCTTTTTAGCGCCAGGGTGTGactttttgtttactttaa
aaATCCTGGATGGAATTGCTTCCCTTTTTGTACATCATCTAGAACTGGTA
TGAAAACCAATGACTTTTTCATTTCAGACGTAAAATAAATGAACTTAAAA
AAGTCGATATAAAAGTGATACAATAGTTACCAAAGATGTCATCTTTTACA
TTGGTATTATCATTATGTATTTTATCTTGTGGTGTGCTTGGAAATTCTAA
CAATAAGGTCAACCTTCCAACCATGGTTTGGGACCCGAACAATGCAATtt
tcaCTTGCAAAGAACCAGTATTTCGTATTCGAAAATCGGACAAGCTTTCT
GTCAACTGTGGCATGCACAATGTACATAATTATTTACGTTTTGGCGCACC
AAGCTTTAATCAACCAACAACACAAGTCATGTTTGTAGAGACAgaaaaag
aatacaatcaatgTAACATTACTGCTGGAAAACCAATCTTGAGATGTAAT
GCTGATTCAAATGAGAGAGCGGCACCAAGTTGCGTTAAAGGGATCAATTG
CACTCAAAACGTACCCTTAGAATTTGATGAACATTACCCAATACCGGTCG
GTTTGAGAGCTGGTAAAATGTATCATTTCATTGGAGCCTCTGGTGCCAGT
AATGCTCCTTGCATCGGCAATGATACCATGTTTAAAGAACCAATGAAATT
CCGAGTGTACGTTTGCACAGATGAAGAGGAGGATGAAGGACTGTGTGAAC
CATGTCAAACGGAAAGCTGCTACCATTCACGCTGCCAAGAAACGTGTACT
GAATGGGTAGACAGCTCTGAAAACATTTTCCAAGATAAAGAAGGCAAATG
TTTCAAAACCCAAAAGAAGACTTGTACATCGAACCTTGTCGCTATTAGTC
AAACTGATACTCGTGAAGAAAGAATCGCTTGTCCACAACCAAAATGCGAA
AAATGGAGACAATCGAAAGCTCTTCTTTACAAAGATGGAGTTTGCTCAAA
ACTGAGAGAGCGCGAATGCATTGATTTCCGTGGGAATAATACAATCCAAA
GAGAAATGGACGAGCTTGCATGTCCACCCAAAACATGTCAAATATGGAGC
GTCCTGGAGAAAATCAAAGTCACAACATCACAAGGAGACAAATGTTCGGA
AAAACGACAACGCTTTTGTTCGTTCAAAACAGAAGACAATCAAGAGCAAG
CTATAGTTGAAAATAAGGAATTTGAAGTTAATTGCACTCAACCTACACTA
CCTCCACCAATTATCATCACTACGGAAGAAACCAAACCACCACCATCACC
TTCAGTAGCGGCTAAAATTGTTTATAGAGAAAATACTGATAAGGAGACTT
ATATTTACATCATCATTGCTGCCAGCTTTGGTTCCTTAATTGTTGGTATC
ATGTTGGGCTTCTGTATAACAAAATGTTGTCAAAGAAATTCGAAATCAGA
AGTGATTAAAACTGTTGAGAAAATGATGCCATTAGAGGGAGTAGGTCCAG
TGGTTgcttatgaaaacaaaaacttcaCCTTAAATCCAGTAATGGAGGAA
GGACAATTAGCAGACGTCGAATTTGTTCCAGCCACGGCGACGATTGGTAA
TACTAAACGGCAAGTTATGGTCGCTAGAAGCGTCTCCTTTTACACACCAG
AGGACCTTCAACAGGGAGGCAAAATTGATCGCCGTAATAGCGAAGGCAAT
AGACGGGCTTATCGGCCCCCGCGTACGATCAATGAATCGAGTCGTAATGT
AATGCGACATCCTAGCGCCACCTCTAAGACTGTTTTAATACGTAATCATA
GTGACGTTACAGAACGTACGTCGTCAGAAAGTGACGGGTCAGTGTTTCAT
TTGAGACAACCTGATGATTGTACTTCGGAAGAAGTTTGAGTGGAAAGATC
ACCAGGATGATGAAATGGATGAAATCCCTTGTGAAGAGGCGAAGAAGGGT
GAGAGGTCAGTCATACAAAGACACTAGACGACTCTCTGTACTGTGAATCG
CAGTAATCAGTGCCTGTCTTCCTGAAAAGACAAGACAAAGAACCAACCAC
GGATGTTACTTTTGTCACTtggatatttttgtaaataaactgATCCAGAA
GAAACATGAGAAAAATGGAAATGGACAAAAGCAAAGAAGTAACTAATAAC
TGGGAGATGACTTCCAAAAATCATTTACATATATCTTCGTTTGCCAACAC
ATATCAATTTGAATACGTGCTCTTGATAAACCATAAATTACCACGTGCTG
TAATGAAACAACTAAAATATTTGAATCAAATAAATCTTGTAAATAGTaat
taattattttgatgatgaagagaaatgga
Run BLAST on NCBI

protein sequence of TCONS_00006303-protein

>TCONS_00006303-protein ID=TCONS_00006303-protein|Name=TCONS_00006303-protein|organism=Clytia hemisphaerica|type=polypeptide|length=567bp
MSSFTLVLSLCILSCGVLGNSNNKVNLPTMVWDPNNAIFTCKEPVFRIRK
SDKLSVNCGMHNVHNYLRFGAPSFNQPTTQVMFVETEKEYNQCNITAGKP
ILRCNADSNERAAPSCVKGINCTQNVPLEFDEHYPIPVGLRAGKMYHFIG
ASGASNAPCIGNDTMFKEPMKFRVYVCTDEEEDEGLCEPCQTESCYHSRC
QETCTEWVDSSENIFQDKEGKCFKTQKKTCTSNLVAISQTDTREERIACP
QPKCEKWRQSKALLYKDGVCSKLRERECIDFRGNNTIQREMDELACPPKT
CQIWSVLEKIKVTTSQGDKCSEKRQRFCSFKTEDNQEQAIVENKEFEVNC
TQPTLPPPIIITTEETKPPPSPSVAAKIVYRENTDKETYIYIIIAASFGS
LIVGIMLGFCITKCCQRNSKSEVIKTVEKMMPLEGVGPVVAYENKNFTLN
PVMEEGQLADVEFVPATATIGNTKRQVMVARSVSFYTPEDLQQGGKIDRR
NSEGNRRAYRPPRTINESSRNVMRHPSATSKTVLIRNHSDVTERTSSESD
GSVFHLRQPDDCTSEEV
Run BLAST on NCBI

transcript from alignment at sc0000066:286481..290736-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006303 ID=TCONS_00006303|Name=TCONS_00006303|organism=Clytia hemisphaerica|type=transcript|length=4256bp|location=Sequence derived from alignment at sc0000066:286481..290736- (Clytia hemisphaerica)
TTCGTTCTACATTTAGTACAAGATTAAGATTGTGGTGATTGCAACTGATA TATCCAAGATAACGATAGACAGGATTTACTGAGAAAGTATCAGAATTCAC CGAACAATTTTTGAGGAGTTATTGAGCAATTTCGTGAAATTAGAAATCAA AAAGGAAGATAAAGATGCCTGATCAATTACAATAAATACTGTTAAGGTTG ATTATATGTGAATGATAAGTTATTGGGTAGAACTGAAGACTGATTGGATA TCTTATGGTGTATTCAACGAGAAAGACAGATCAAAAACTTGAAAATAAGG CAGACAAGTTTCATGGGATTGAAAGTTGAAATTTATCATTTACAGTAATC AAGGAAAATACAGTATTGTTGGAAGAAAGTTGAAACATTAAAATCAGTAG CTAGAGGTGGGCATAACCTTTCAAAAAATTAGGTCACTGCGCCTGCTCAT TGTTTATGATGCGTCTTGGTTTTTCAGTTCAAACAATTTCAAAAAGTTCT GAAGCTAGGTAACAGTCACCAAGATGCAGAGTAGGTCAAAAAGGAGCTGA CCAGATTAAGCGATTCCGGTAGAATAGGAAAATAGTAACGAAAGGAAATC TTCTCAAATCTTGGCGGCTACCAAAAAAGAAAAAGAAGGATAAAAAAGCT TTCAGAAAATGATGATGACAGAAAAGTTGTTCAGAAAAAAAAAGTTAATT AAATTTCCTTTTGAAAGACAGGATACAACAGCAATTATAATTTTGAAAAG AGATATTGTGAACAATAAAGAACAAAAGACGTGAAAGTCATTAGTATTTA ATCACCTCCTCATTATAACAAAAAAATGAAAGAATAATATAAGAGGCTAC CACTGGTCATCTGATGATACCAAGGGGAGATCTAGTATTACATAAAAATT AATCACCATTTATTCTATCCTGTTCTTCTATTTATTGTTTTTCAAAAAAG AAAAGAATATTTGTTCTTGCATCAATAATGGAACACCATGACTAATACCA ATTCGCAATGCAATAGTTTCCTGTGGTTGTGCTTCACTTTCAATTGATTT GTTTCTTTGCGTCTTTTTAGCGCCAGGGTGTGACTTTTTGTTTACTTTAA AAATCCTGGATGGAATTGCTTCCCTTTTTGTACATCATCTAGAACTGGTA TGAAAACCAATGACTTTTTCATTTCAGACGTAAAATAAATGAACTTAAAA AAGTCGATATAAAAGTGATACAATAGTTACCAAAGATGTCATCTTTTACA TTGGTATTATCATTATGTATTTTATCTTGTGGTGTGCTTGGAAATTCTAA CAATAAGGTCAACCTTCCAACCATGGTTTGGGACCCGAACAATGCAATGT AAGATCATTCTTGCAATTCTATATTTCAATTGACAATTAAAATAGTTGAT TTTTCATTAGTTGAAGAGTTATTCATAATTTTCATCCTCTGGCTTTAACA AAACCAATGCGAAAAAGATTCCCTTTGTTTCCAATATAATTGATTACAAA TCATTTCTTCTTCTTCAGTTTCACTTGCAAAGAACCAGTATTTCGTATTC GAAAATCGGACAAGCTTTCTGTCAACTGTGGCATGCACAATGTACATAAT TATTTACGTTTTGGCGCACCAAGCTTTAATCAACCAACAACACAAGTCAT GTTTGTAGAGACAGAAAAAGAATACAATCAATGTAACATTACTGGTAAGG CATTTTTTATTTCTTGCACTGTCATGTTTGTGGTAGATGGTTTTCACTTT TGAATCTAATGCTTGTTGTTCTTGAATGAGTTTGTGGTGAAAGAAAGTTT CATTTCTATATGTAACGCAAAAGTCATGCTTGTGGTGTAGTTTTTGTGAG AAAATTGTATGCTTTTCATATTCGAGTGCAATTCTTGTTGTAAGATTTTT TTCAATTTGAAGTTAATTCGATTTTAAGTTCTTTGGTTTTCAAGAATCTA TTATGTTTGTGATTTTAGCTGGAAAACCAATCTTGAGATGTAATGCTGAT TCAAATGAGAGAGCGGCACCAAGTTGCGTTAAAGGGATCAATTGCACTCA AAACGTACCCTTAGAATTTGATGAACATTACCCAATACCGGTCGGTTTGA GAGCTGGTAAAATGTATCATTTCATTGGAGCCTCTGGTGCCAGTAATGCT CCTTGCATCGGCAATGATACCATGTTTAAAGAACCAATGAAATTCCGAGT GTACGTTTGCACAGATGAAGAGGAGGATGAAGGACTGTGTGAACCATGTC AAACGGAAAGCTGCTACCATTCACGTAAGTGTGCATTATATTGTATGTAA ATTGTACTGTATAAAACACCTCGGGAACACTTTCTTTCTGCTACAGTAAC CATAGGCAGGTGTATTGAATTTTTAACATTCTTCATACCATCTTAGGAAT ATCAGTATGACAAATTTTTATCACAGAAATTCTCAATATTTCTTTATATT TTCACATTACAGGCTGCCAAGAAACGTGTACTGAATGGGTAGACAGCTCT GAAAACATTTTCCAAGATAAAGAAGGCAAATGTTTCAAAACCCAAAAGAA GACTTGTACATCGAACCTTGTCGCTATTAGTCAAACTGATACTCGTGAAG AAAGAATCGCTTGTCCACAACCAAAATGCGAAAAATGGAGACAATCGAAA GCTCTTCTTTACAAAGATGGAGTTTGCTCAAAACTGAGAGAGCGCGAATG CATTGATTTCCGTGGGAATAATACAATCCAAAGAGAAATGGACGAGCTTG CATGTCCACCCAAAACATGTCAAATATGGAGCGTCCTGGAGAAAATCAAA GTCACAACATCACAAGGAGACAAATGTTCGGAAAAACGACAACGCTTTTG TTCGTTCAAAACAGAAGACAATCAAGAGCAAGCTATAGTTGAAAATAAGG AATTTGAAGTTAATTGCACTCAACCTACACTACCTCCACCAATTATCATC ACTACGGAAGAAACCAAACCACCACCATCACCTTCAGTAGCGGCTAAAAT TGTTTATAGAGAAAATACTGATAAGGAGACTTATATTTACATCATCATTG CTGCCAGCTTTGGTTCCTTAATTGTTGGTATCATGTTGGGCTTCTGTATA ACAAAATGTTGTCAAAGAAATTCGAAATCAGAAGTGATTAAAACTGTTGA GAAAATGATGCCATTAGAGGGAGTAGGTAAGACACCACAAAAAATTTATT TTTGGGTATTTTTGACTTGTATAATTTGCGATTCTACACTGCAAACGTTT GCAAAACGAAGGTTTTTCAAATTGCTCAATTTCACTTTGGAAATAGATAC TTTAAGTCTCTTGTTGTCATATCAATTAAAAAAACGATCAAAAATAAAAA AGTGTTCATAATAGATATCGGATGCTTAAGTGATTAATAATCATTTCCTT TTGTTTTTCAATCAATTTCAGGTCCAGTGGTTGCTTATGAAAACAAAAAC TTCACCTTAAATCCAGTAATGGAGGAAGGACAATTAGCAGACGTCGAATT TGTTCCAGCCACGGCGACGATTGGTAATACTAAACGGCAAGTTATGGTCG CTAGAAGCGTCTCCTTTTACACACCAGAGGACCTTCAACAGGGAGGCAAA ATTGATCGCCGTAATAGCGAAGGCAATAGACGGGCTTATCGGCCCCCGCG TACGATCAATGAATCGAGTCGTAATGTAATGCGACATCCTAGCGCCACCT CTAAGACTGTTTTAATACGTAATCATAGTGACGTTACAGAACGTACGTCG TCAGAAAGTGACGGGTCAGTGTTTCATTTGAGACAACCTGATGATTGTAC TTCGGAAGAAGTTTGAGTGGAAAGATCACCAGGATGATGAAATGGATGAA ATCCCTTGTGAAGAGGCGAAGAAGGGTGAGAGGTCAGTCATACAAAGACA CTAGACGACTCTCTGTACTGTGAATCGCAGTAATCAGTGCCTGTCTTCCT GAAAAGACAAGACAAAGAACCAACCACGGATGTTACTTTTGTCACTTGGA TATTTTTGTAAATAAACTGATCCAGAAGAAACATGAGAAAAATGGAAATG GACAAAAGCAAAGAAGTAACTAATAACTGGGAGATGACTTCCAAAAATCA TTTACATATATCTTCGTTTGCCAACACATATCAATTTGAATACGTGCTCT TGATAAACCATAAATTACCACGTGCTGTAATGAAACAACTAAAATATTTG AATCAAATAAATCTTGTAAATAGTAATTAATTATTTTGATGATGAAGAGA AATGGA

Coding sequence (CDS) from alignment at sc0000066:286481..290736-

>TCONS_00006303 ID=TCONS_00006303|Name=TCONS_00006303|organism=Clytia hemisphaerica|type=CDS|length=8520bp|location=Sequence derived from alignment at sc0000066:286481..290736- (Clytia hemisphaerica)
GTCCAGTGGTTGCTTATGAAAACAAAAACTTCACCTTAAATCCAGTAATG
GAGGAAGGACAATTAGCAGACGTCGAATTTGTTCCAGCCACGGCGACGAT
TGGTAATACTAAACGGCAAGTTATGGTCGCTAGAAGCGTCTCCTTTTACA
CACCAGAGGACCTTCAACAGGGAGGCAAAATTGATCGCCGTAATAGCGAA
GGCAATAGACGGGCTTATCGGCCCCCGCGTACGATCAATGAATCGAGTCG
TAATGTAATGCGACATCCTAGCGCCACCTCTAAGACTGTTTTAATACGTA
ATCATAGTGACGTTACAGAACGTACGTCGTCAGAAAGTGACGGGTCAGTG
TTTCATTTGAGACAACCTGATGATTGTACTTCGGAAGAAGTTTGAGCTGC
CAAGAAACGTGTACTGAATGGGTAGACAGCTCTGAAAACATTTTCCAAGA
TAAAGAAGGCAAATGTTTCAAAACCCAAAAGAAGACTTGTACATCGAACC
TTGTCGCTATTAGTCAAACTGATACTCGTGAAGAAAGAATCGCTTGTCCA
CAACCAAAATGCGAAAAATGGAGACAATCGAAAGCTCTTCTTTACAAAGA
TGGAGTTTGCTCAAAACTGAGAGAGCGCGAATGCATTGATTTCCGTGGGA
ATAATACAATCCAAAGAGAAATGGACGAGCTTGCATGTCCACCCAAAACA
TGTCAAATATGGAGCGTCCTGGAGAAAATCAAAGTCACAACATCACAAGG
AGACAAATGTTCGGAAAAACGACAACGCTTTTGTTCGTTCAAAACAGAAG
ACAATCAAGAGCAAGCTATAGTTGAAAATAAGGAATTTGAAGTTAATTGC
ACTCAACCTACACTACCTCCACCAATTATCATCACTACGGAAGAAACCAA
ACCACCACCATCACCTTCAGTAGCGGCTAAAATTGTTTATAGAGAAAATA
CTGATAAGGAGACTTATATTTACATCATCATTGCTGCCAGCTTTGGTTCC
TTAATTGTTGGTATCATGTTGGGCTTCTGTATAACAAAATGTTGTCAAAG
AAATTCGAAATCAGAAGTGATTAAAACTGTTGAGAAAATGATGCCATTAG
AGGGAGTAGCTGGAAAACCAATCTTGAGATGTAATGCTGATTCAAATGAG
AGAGCGGCACCAAGTTGCGTTAAAGGGATCAATTGCACTCAAAACGTACC
CTTAGAATTTGATGAACATTACCCAATACCGGTCGGTTTGAGAGCTGGTA
AAATGTATCATTTCATTGGAGCCTCTGGTGCCAGTAATGCTCCTTGCATC
GGCAATGATACCATGTTTAAAGAACCAATGAAATTCCGAGTGTACGTTTG
CACAGATGAAGAGGAGGATGAAGGACTGTGTGAACCATGTCAAACGGAAA
GCTGCTACCATTCACTTTCACTTGCAAAGAACCAGTATTTCGTATTCGAA
AATCGGACAAGCTTTCTGTCAACTGTGGCATGCACAATGTACATAATTAT
TTACGTTTTGGCGCACCAAGCTTTAATCAACCAACAACACAAGTCATGTT
TGTAGAGACAGAAAAAGAATACAATCAATGTAACATTACTGATGTCATCT
TTTACATTGGTATTATCATTATGTATTTTATCTTGTGGTGTGCTTGGAAA
TTCTAACAATAAGGTCAACCTTCCAACCATGGTTTGGGACCCGAACAATG
CAATGTCCAGTGGTTGCTTATGAAAACAAAAACTTCACCTTAAATCCAGT
AATGGAGGAAGGACAATTAGCAGACGTCGAATTTGTTCCAGCCACGGCGA
CGATTGGTAATACTAAACGGCAAGTTATGGTCGCTAGAAGCGTCTCCTTT
TACACACCAGAGGACCTTCAACAGGGAGGCAAAATTGATCGCCGTAATAG
CGAAGGCAATAGACGGGCTTATCGGCCCCCGCGTACGATCAATGAATCGA
GTCGTAATGTAATGCGACATCCTAGCGCCACCTCTAAGACTGTTTTAATA
CGTAATCATAGTGACGTTACAGAACGTACGTCGTCAGAAAGTGACGGGTC
AGTGTTTCATTTGAGACAACCTGATGATTGTACTTCGGAAGAAGTTTGAG
CTGCCAAGAAACGTGTACTGAATGGGTAGACAGCTCTGAAAACATTTTCC
AAGATAAAGAAGGCAAATGTTTCAAAACCCAAAAGAAGACTTGTACATCG
AACCTTGTCGCTATTAGTCAAACTGATACTCGTGAAGAAAGAATCGCTTG
TCCACAACCAAAATGCGAAAAATGGAGACAATCGAAAGCTCTTCTTTACA
AAGATGGAGTTTGCTCAAAACTGAGAGAGCGCGAATGCATTGATTTCCGT
GGGAATAATACAATCCAAAGAGAAATGGACGAGCTTGCATGTCCACCCAA
AACATGTCAAATATGGAGCGTCCTGGAGAAAATCAAAGTCACAACATCAC
AAGGAGACAAATGTTCGGAAAAACGACAACGCTTTTGTTCGTTCAAAACA
GAAGACAATCAAGAGCAAGCTATAGTTGAAAATAAGGAATTTGAAGTTAA
TTGCACTCAACCTACACTACCTCCACCAATTATCATCACTACGGAAGAAA
CCAAACCACCACCATCACCTTCAGTAGCGGCTAAAATTGTTTATAGAGAA
AATACTGATAAGGAGACTTATATTTACATCATCATTGCTGCCAGCTTTGG
TTCCTTAATTGTTGGTATCATGTTGGGCTTCTGTATAACAAAATGTTGTC
AAAGAAATTCGAAATCAGAAGTGATTAAAACTGTTGAGAAAATGATGCCA
TTAGAGGGAGTAGCTGGAAAACCAATCTTGAGATGTAATGCTGATTCAAA
TGAGAGAGCGGCACCAAGTTGCGTTAAAGGGATCAATTGCACTCAAAACG
TACCCTTAGAATTTGATGAACATTACCCAATACCGGTCGGTTTGAGAGCT
GGTAAAATGTATCATTTCATTGGAGCCTCTGGTGCCAGTAATGCTCCTTG
CATCGGCAATGATACCATGTTTAAAGAACCAATGAAATTCCGAGTGTACG
TTTGCACAGATGAAGAGGAGGATGAAGGACTGTGTGAACCATGTCAAACG
GAAAGCTGCTACCATTCACTTTCACTTGCAAAGAACCAGTATTTCGTATT
CGAAAATCGGACAAGCTTTCTGTCAACTGTGGCATGCACAATGTACATAA
TTATTTACGTTTTGGCGCACCAAGCTTTAATCAACCAACAACACAAGTCA
TGTTTGTAGAGACAGAAAAAGAATACAATCAATGTAACATTACTGATGTC
ATCTTTTACATTGGTATTATCATTATGTATTTTATCTTGTGGTGTGCTTG
GAAATTCTAACAATAAGGTCAACCTTCCAACCATGGTTTGGGACCCGAAC
AATGCAATGTCCAGTGGTTGCTTATGAAAACAAAAACTTCACCTTAAATC
CAGTAATGGAGGAAGGACAATTAGCAGACGTCGAATTTGTTCCAGCCACG
GCGACGATTGGTAATACTAAACGGCAAGTTATGGTCGCTAGAAGCGTCTC
CTTTTACACACCAGAGGACCTTCAACAGGGAGGCAAAATTGATCGCCGTA
ATAGCGAAGGCAATAGACGGGCTTATCGGCCCCCGCGTACGATCAATGAA
TCGAGTCGTAATGTAATGCGACATCCTAGCGCCACCTCTAAGACTGTTTT
AATACGTAATCATAGTGACGTTACAGAACGTACGTCGTCAGAAAGTGACG
GGTCAGTGTTTCATTTGAGACAACCTGATGATTGTACTTCGGAAGAAGTT
TGAGCTGCCAAGAAACGTGTACTGAATGGGTAGACAGCTCTGAAAACATT
TTCCAAGATAAAGAAGGCAAATGTTTCAAAACCCAAAAGAAGACTTGTAC
ATCGAACCTTGTCGCTATTAGTCAAACTGATACTCGTGAAGAAAGAATCG
CTTGTCCACAACCAAAATGCGAAAAATGGAGACAATCGAAAGCTCTTCTT
TACAAAGATGGAGTTTGCTCAAAACTGAGAGAGCGCGAATGCATTGATTT
CCGTGGGAATAATACAATCCAAAGAGAAATGGACGAGCTTGCATGTCCAC
CCAAAACATGTCAAATATGGAGCGTCCTGGAGAAAATCAAAGTCACAACA
TCACAAGGAGACAAATGTTCGGAAAAACGACAACGCTTTTGTTCGTTCAA
AACAGAAGACAATCAAGAGCAAGCTATAGTTGAAAATAAGGAATTTGAAG
TTAATTGCACTCAACCTACACTACCTCCACCAATTATCATCACTACGGAA
GAAACCAAACCACCACCATCACCTTCAGTAGCGGCTAAAATTGTTTATAG
AGAAAATACTGATAAGGAGACTTATATTTACATCATCATTGCTGCCAGCT
TTGGTTCCTTAATTGTTGGTATCATGTTGGGCTTCTGTATAACAAAATGT
TGTCAAAGAAATTCGAAATCAGAAGTGATTAAAACTGTTGAGAAAATGAT
GCCATTAGAGGGAGTAGCTGGAAAACCAATCTTGAGATGTAATGCTGATT
CAAATGAGAGAGCGGCACCAAGTTGCGTTAAAGGGATCAATTGCACTCAA
AACGTACCCTTAGAATTTGATGAACATTACCCAATACCGGTCGGTTTGAG
AGCTGGTAAAATGTATCATTTCATTGGAGCCTCTGGTGCCAGTAATGCTC
CTTGCATCGGCAATGATACCATGTTTAAAGAACCAATGAAATTCCGAGTG
TACGTTTGCACAGATGAAGAGGAGGATGAAGGACTGTGTGAACCATGTCA
AACGGAAAGCTGCTACCATTCACTTTCACTTGCAAAGAACCAGTATTTCG
TATTCGAAAATCGGACAAGCTTTCTGTCAACTGTGGCATGCACAATGTAC
ATAATTATTTACGTTTTGGCGCACCAAGCTTTAATCAACCAACAACACAA
GTCATGTTTGTAGAGACAGAAAAAGAATACAATCAATGTAACATTACTGA
TGTCATCTTTTACATTGGTATTATCATTATGTATTTTATCTTGTGGTGTG
CTTGGAAATTCTAACAATAAGGTCAACCTTCCAACCATGGTTTGGGACCC
GAACAATGCAATGTCCAGTGGTTGCTTATGAAAACAAAAACTTCACCTTA
AATCCAGTAATGGAGGAAGGACAATTAGCAGACGTCGAATTTGTTCCAGC
CACGGCGACGATTGGTAATACTAAACGGCAAGTTATGGTCGCTAGAAGCG
TCTCCTTTTACACACCAGAGGACCTTCAACAGGGAGGCAAAATTGATCGC
CGTAATAGCGAAGGCAATAGACGGGCTTATCGGCCCCCGCGTACGATCAA
TGAATCGAGTCGTAATGTAATGCGACATCCTAGCGCCACCTCTAAGACTG
TTTTAATACGTAATCATAGTGACGTTACAGAACGTACGTCGTCAGAAAGT
GACGGGTCAGTGTTTCATTTGAGACAACCTGATGATTGTACTTCGGAAGA
AGTTTGAGCTGCCAAGAAACGTGTACTGAATGGGTAGACAGCTCTGAAAA
CATTTTCCAAGATAAAGAAGGCAAATGTTTCAAAACCCAAAAGAAGACTT
GTACATCGAACCTTGTCGCTATTAGTCAAACTGATACTCGTGAAGAAAGA
ATCGCTTGTCCACAACCAAAATGCGAAAAATGGAGACAATCGAAAGCTCT
TCTTTACAAAGATGGAGTTTGCTCAAAACTGAGAGAGCGCGAATGCATTG
ATTTCCGTGGGAATAATACAATCCAAAGAGAAATGGACGAGCTTGCATGT
CCACCCAAAACATGTCAAATATGGAGCGTCCTGGAGAAAATCAAAGTCAC
AACATCACAAGGAGACAAATGTTCGGAAAAACGACAACGCTTTTGTTCGT
TCAAAACAGAAGACAATCAAGAGCAAGCTATAGTTGAAAATAAGGAATTT
GAAGTTAATTGCACTCAACCTACACTACCTCCACCAATTATCATCACTAC
GGAAGAAACCAAACCACCACCATCACCTTCAGTAGCGGCTAAAATTGTTT
ATAGAGAAAATACTGATAAGGAGACTTATATTTACATCATCATTGCTGCC
AGCTTTGGTTCCTTAATTGTTGGTATCATGTTGGGCTTCTGTATAACAAA
ATGTTGTCAAAGAAATTCGAAATCAGAAGTGATTAAAACTGTTGAGAAAA
TGATGCCATTAGAGGGAGTAGCTGGAAAACCAATCTTGAGATGTAATGCT
GATTCAAATGAGAGAGCGGCACCAAGTTGCGTTAAAGGGATCAATTGCAC
TCAAAACGTACCCTTAGAATTTGATGAACATTACCCAATACCGGTCGGTT
TGAGAGCTGGTAAAATGTATCATTTCATTGGAGCCTCTGGTGCCAGTAAT
GCTCCTTGCATCGGCAATGATACCATGTTTAAAGAACCAATGAAATTCCG
AGTGTACGTTTGCACAGATGAAGAGGAGGATGAAGGACTGTGTGAACCAT
GTCAAACGGAAAGCTGCTACCATTCACTTTCACTTGCAAAGAACCAGTAT
TTCGTATTCGAAAATCGGACAAGCTTTCTGTCAACTGTGGCATGCACAAT
GTACATAATTATTTACGTTTTGGCGCACCAAGCTTTAATCAACCAACAAC
ACAAGTCATGTTTGTAGAGACAGAAAAAGAATACAATCAATGTAACATTA
CTGATGTCATCTTTTACATTGGTATTATCATTATGTATTTTATCTTGTGG
TGTGCTTGGAAATTCTAACAATAAGGTCAACCTTCCAACCATGGTTTGGG
ACCCGAACAATGCAATGTCCAGTGGTTGCTTATGAAAACAAAAACTTCAC
CTTAAATCCAGTAATGGAGGAAGGACAATTAGCAGACGTCGAATTTGTTC
CAGCCACGGCGACGATTGGTAATACTAAACGGCAAGTTATGGTCGCTAGA
AGCGTCTCCTTTTACACACCAGAGGACCTTCAACAGGGAGGCAAAATTGA
TCGCCGTAATAGCGAAGGCAATAGACGGGCTTATCGGCCCCCGCGTACGA
TCAATGAATCGAGTCGTAATGTAATGCGACATCCTAGCGCCACCTCTAAG
ACTGTTTTAATACGTAATCATAGTGACGTTACAGAACGTACGTCGTCAGA
AAGTGACGGGTCAGTGTTTCATTTGAGACAACCTGATGATTGTACTTCGG
AAGAAGTTTGAGCTGCCAAGAAACGTGTACTGAATGGGTAGACAGCTCTG
AAAACATTTTCCAAGATAAAGAAGGCAAATGTTTCAAAACCCAAAAGAAG
ACTTGTACATCGAACCTTGTCGCTATTAGTCAAACTGATACTCGTGAAGA
AAGAATCGCTTGTCCACAACCAAAATGCGAAAAATGGAGACAATCGAAAG
CTCTTCTTTACAAAGATGGAGTTTGCTCAAAACTGAGAGAGCGCGAATGC
ATTGATTTCCGTGGGAATAATACAATCCAAAGAGAAATGGACGAGCTTGC
ATGTCCACCCAAAACATGTCAAATATGGAGCGTCCTGGAGAAAATCAAAG
TCACAACATCACAAGGAGACAAATGTTCGGAAAAACGACAACGCTTTTGT
TCGTTCAAAACAGAAGACAATCAAGAGCAAGCTATAGTTGAAAATAAGGA
ATTTGAAGTTAATTGCACTCAACCTACACTACCTCCACCAATTATCATCA
CTACGGAAGAAACCAAACCACCACCATCACCTTCAGTAGCGGCTAAAATT
GTTTATAGAGAAAATACTGATAAGGAGACTTATATTTACATCATCATTGC
TGCCAGCTTTGGTTCCTTAATTGTTGGTATCATGTTGGGCTTCTGTATAA
CAAAATGTTGTCAAAGAAATTCGAAATCAGAAGTGATTAAAACTGTTGAG
AAAATGATGCCATTAGAGGGAGTAGCTGGAAAACCAATCTTGAGATGTAA
TGCTGATTCAAATGAGAGAGCGGCACCAAGTTGCGTTAAAGGGATCAATT
GCACTCAAAACGTACCCTTAGAATTTGATGAACATTACCCAATACCGGTC
GGTTTGAGAGCTGGTAAAATGTATCATTTCATTGGAGCCTCTGGTGCCAG
TAATGCTCCTTGCATCGGCAATGATACCATGTTTAAAGAACCAATGAAAT
TCCGAGTGTACGTTTGCACAGATGAAGAGGAGGATGAAGGACTGTGTGAA
CCATGTCAAACGGAAAGCTGCTACCATTCACTTTCACTTGCAAAGAACCA
GTATTTCGTATTCGAAAATCGGACAAGCTTTCTGTCAACTGTGGCATGCA
CAATGTACATAATTATTTACGTTTTGGCGCACCAAGCTTTAATCAACCAA
CAACACAAGTCATGTTTGTAGAGACAGAAAAAGAATACAATCAATGTAAC
ATTACTGATGTCATCTTTTACATTGGTATTATCATTATGTATTTTATCTT
GTGGTGTGCTTGGAAATTCTAACAATAAGGTCAACCTTCCAACCATGGTT
TGGGACCCGAACAATGCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003596XLOC_003596Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006303-exon-sc0000066-1575043694:289389..290736TCONS_00006303-exon-sc0000066-1575043694:289389..290736Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1575043694:289043..289218TCONS_00006303-exon-sc0000066-1575043694:289043..289218Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1575043694:288463..288768TCONS_00006303-exon-sc0000066-1575043694:288463..288768Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1575043694:287561..288274TCONS_00006303-exon-sc0000066-1575043694:287561..288274Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1575043694:286481..287315TCONS_00006303-exon-sc0000066-1575043694:286481..287315Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1510915933:289389..290736TCONS_00006303-exon-sc0000066-1510915933:289389..290736Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1510915933:289043..289218TCONS_00006303-exon-sc0000066-1510915933:289043..289218Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1510915933:288463..288768TCONS_00006303-exon-sc0000066-1510915933:288463..288768Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1510915933:287561..288274TCONS_00006303-exon-sc0000066-1510915933:287561..288274Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1510915933:286481..287315TCONS_00006303-exon-sc0000066-1510915933:286481..287315Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1491911889:289389..290736TCONS_00006303-exon-sc0000066-1491911889:289389..290736Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1491911889:289043..289218TCONS_00006303-exon-sc0000066-1491911889:289043..289218Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1491911889:288463..288768TCONS_00006303-exon-sc0000066-1491911889:288463..288768Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1491911889:287561..288274TCONS_00006303-exon-sc0000066-1491911889:287561..288274Clytia hemisphaericaexon
TCONS_00006303-exon-sc0000066-1491911889:286481..287315TCONS_00006303-exon-sc0000066-1491911889:286481..287315Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006303-proteinTCONS_00006303-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:286481..290736 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.180505 0 4.36715 2.35161 1.47181 2.786 21.3409 45.2155 6.79225 85.7724 34.5108 30.5704 28.085 23.5854 5.13829 9.17011 0.358551 0.828121 0 0.0857676 0.0752852 0.0767053 0 0.153562 10.7422 5.08693 0.0578266 0.0447786
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006303 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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