TCONS_00006272 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006272
Unique NameTCONS_00006272
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3564

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006272 ID=TCONS_00006272|Name=TCONS_00006272|organism=Clytia hemisphaerica|type=transcript|length=3564bp
TTTGGTTTGTTTACAGCGACATTTGAGAAATGTTGTTTTGATctgtttcc
gggggtttgctcCGAGCTTTTGTGACAATTACGTCATTAGTCTACTTCCC
GCGTTTTTGCTGCTGTGCGATTCGTCAAAATAAACAATAGAGCAAAGTTT
AATTCGCGATCTGATTGGACAATAAAACTTTTCGAATGCGGGCATTCGAA
TTTGCATTCGAATTTGCTCACATGTGAgcaaatcaaaatttgaaaacttt
cttTCGAAAATTGGTTTTGTTGGAGGAGACACATCATTCTGAAGCATACA
GAAATACATCTGTTCACCATGTCTCAAAGGTTGAAACAGAAAGCTCCAGT
TTATTATAAAGGCCTTAATAATTCCAGCACAGCTACAGAGCTGGAAATTT
TGGACACTGGAAGGAAGAGAAACAACAAGAATGTTTATAGAGCTGAAGAA
GTGCTCGCCGAAAAAAAGATTGGAAAAAGAACTTACTATCTTGTGATGTG
GTACGGCTGGGGAAGTGACGATTGCACATGGGAACCCACTCAAAATTTAT
TGGACGTCAGACTTTTACACTTTTGGGAACATCCAGCACCTGACATGAGG
CAAGTTGATTATTATGTTGAGCGTCTACTCTCTTGCTTTGAGACCGCCCT
AAAAGAGCGACTGCGAAGTGTGAAAGTTCTGGACTTTCCAGTAGCTATTT
TTCGGTATCTTTTCCATGGGAGGGGGGTGGATAAGAAAAGAGGGAATAAA
TCTCTCAATGAGGAAGATTTTGATCCTCACTGGTTCCCCAACAATTGGCA
TTCTGGGCTCATAAACAAGAGAGGGACGAAAAGGATTATTTTATTTCCTG
TGGTTGTGCgtagttttttatcaaaatccccGAAGCTCTACCAGAAGCAT
AAATCTGGTGAGGTTAGGGAGAAAAAACAACGCATAATTCAGAGGCTTTC
AGTCACTATTTTTAAAGACACTTTTAATTCTTATTAATTATTCATAACTA
ATCTTATTTTATGGAAATATATATGGAAAATAACCTTGCAAGTTTGGCTG
GTTATTATGGTTGTAGTTGCCCTCTAAGATAGGCAAGGGAGGAGATAGAC
AAGCTATAATTCAAGAACTTGATAAATTAGATTGTAAGATATCACGTTGA
AACATTTtcacgtttttctttttcttttcatgtcTGGTATATCTGAGGAA
CATTGCATTTCAAAAGTCAAACAGCTAACTTCAAAACTCACTGTCAAATG
ATTATCATCACCTTGTTCTCGAAAACATCAATTTCTTCTGCACTGAGTGA
TGGTCGGTTCATCGTGTTGTACAAATGTTCAAAGTCCTAAGAGATAAAGG
GGTATTGGTTACCTGTCTTCTGTTGATATGTCACAGTATATACACGAATG
TTTCGATGTGGCAGCCTTCATACCAAGGAGTGTTAACAAGAACTGAAagG
ATTGTATAGGACATCACCACGAGATTCGATTTCCTTGTCAGCTTTGTACC
ATCGCCACTGATCTTCAACTGAGATATAAGGTGTAGATAACGTTGTTCCT
GAAGTAAATGAAGAAGAATGGACGAGTCATACGAAACACCTCGGAAGAGT
CTAAAGATTACTATCCAAATTACAAAGAATGGACGAGTCATACGAAACAC
CTCGGAAGAGTTTAAAGATTACTATCCAAATTACAGTTCAAATAAAAGTT
ACCATTTCTCCAAACCAGTGGATTGATTTCTAAATTTGTTGGTTCGTCGT
CTTCTTGACTCGCTGTTGGTTCGTTGTCTTCTTGGCTGGATGTTTGCTCG
CCGCCTTGACTGGTTGTTGGCTCGCCGCCTTGACTGGAAGTTGGCTCGTC
GCCTTGACTGGAATTCTGCGATCCTGAAtacaattatgaaataaaatata
ttagCATTGTCTCTCCATTCTGTTATTATATACTCCCTTACACCCGACCC
AGATTATCCCTTTGTTCTCCTTATCCCTACAGCAAACTTACCAGAAAATT
TAAGGGAAATCTTTGTCCGCGATGGTGTCAATAGTTTTATCTCTTGTGGT
ACAAGACCAGATTTTTCCGCCGTTTCAGTCATAGCTGACCTAAAAGCAAA
TAAAGTTAAACGTTCAGTCCTTGGTCTTACGGTGCATTTTCCTTATCAAA
ATTGGTAATAAATGTTGCTCTAAAAGAAGAATTCCTACTTTATTTGAGAT
ATTCTCCTTTGTTGTTGACGTTTTCCGAGGTCGGCGAAAGGTTTGAGTTT
CTTCGTATCTCGTGGCTGatattagaaatagaaatttttagttCGATGCG
TAGAGtggacaaaaatcttttttttcaaagtcatGGTGGGTGGGGCTTAA
GATTGTCGACAGATCTATTTAATCTAAGGTATTTGATAAACGGGGGGGGA
CCTAATAAAAATCCCCAACCTTTCACATGACCCAATAAGGTTCACTCAAC
GGTATACGAATCGGATTTACCTCGGGCGTTGAAGGTGGTTCCATTCTTCC
AGCATTGGTTGGTGTAAAAAAGTGCCATTTCTCTTTTACCATCCTTCTTT
TGACAGAACTTTTCCCCTTTATTTGTAACCGCAGCTTTTTGCCGAGCGAG
TAAATACATCTATAAATTCGTTCATCAATCTCGACACTAAATCCAATTTT
TCTAAGAAGCCCTTCAAAGTACCCCTTTGCCTCTACATACGTCAACGTCG
TTGCATATACCGCCAAATCACCTCTAACCTCTACAGTGGGTTTTCTTTGG
TCAACCTTTGAACCGTTCGTATAATTAATCGAATTATTGAAAGCCATATT
tctttattgaattttatttgtaaagaaGAAAAACGTTAAACGCACTCAAC
AAATTTATATACTTCGCTTGGCGtcacttttctttttcgaaggttttgtt
tatttaatttcTAAGACGATCCGACGTCAATTGAAATAGCCTCATGTTCA
GGCCGAAAATGCCATTGGTTCTCCCGTAATAACCATATGATCATTGTACA
GAACGAGAAAGCTCTCGGTATTTGTTCGGTTTTAAACACGCAATAATGAG
GGTTTTCCTCTGATCAAAACATACATTCGAATGTTAGGCGGAAAACCCAA
AGCCGTACTACcgattttaaaagccaaaatGCCACATGACTTTCTGTTGG
AACCATATcattattatacatttttggaaagagGAGAGGATGAAGAATTA
GATTATGCttgtattttaaaagtttttatatcTCCGAATGTTTTCTGCCT
TGTCAAAGATAGCTACTTTTTTTAGAAATGACCGAAATGAGTCTTGTAAA
AAAGAGTAAATAAAATAGTCTAGGATTCGAAATTTTTGGTCAGAAAAAAG
ACATAAGTAAACTGAAACATCTTTTCGTTCGATACAGTTGTTTATTTCgt
aaaaaatagcaaaacataTATTAtaataaagcaaagaaaaacatataCAA
AACTGAAAtgttctctttttcttttttgacgttacTTTTCGAACGCAAAC
CCCCGGATTTCTATAAATATACAATTCGAACGTCACTGTTGCAGTGCAAC
ATTCGACGCGATGA
Run BLAST on NCBI

protein sequence of TCONS_00006272-protein

>TCONS_00006272-protein ID=TCONS_00006272-protein|Name=TCONS_00006272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MSQRLKQKAPVYYKGLNNSSTATELEILDTGRKRNNKNVYRAEEVLAEKK
IGKRTYYLVMWYGWGSDDCTWEPTQNLLDVRLLHFWEHPAPDMRQVDYYV
ERLLSCFETALKERLRSVKVLDFPVAIFRYLFHGRGVDKKRGNKSLNEED
FDPHWFPNNWHSGLINKRGTKRIILFPVVVRSFLSKSPKLYQKHKSGEVR
EKKQRIIQRLSVTIFKDTFNSY
Run BLAST on NCBI

transcript from alignment at sc0000066:406184..412433+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006272 ID=TCONS_00006272|Name=TCONS_00006272|organism=Clytia hemisphaerica|type=transcript|length=6250bp|location=Sequence derived from alignment at sc0000066:406184..412433+ (Clytia hemisphaerica)
TTTGGTTTGTTTACAGCGACATTTGAGAAATGTTGTTTTGATctgtttcc
gggggtttgctcCGAGCTTTTGTGACAATTACGTCATTAGTCTACTTCCC
GCGTTTTTGCTGCTGTGCGATTCGTCAAAATAAACAATAGAGCAAAGTTT
AATTCGCGATCTGATTGGACAATAAAACTTTTCGAATGCGGGCATTCGAA
TTTGCATTCGAATTTGCTCACATGTGAgcaaatcaaaatttgaaaacttt
cttTCGAAAATTGGTTTTGTTGGAGGAGACACATCATTCTGAAGCATACA
GAAATACATCTGTTCACCATGTCTCAAAGGTTGAAACAGAAAGCTCCAGT
TTATTATAAAGGCCTTAATAATTCCAGCACAGCTACAGAGCTGGAAATTT
TGGACACTGGAAGGAAGAGAAACAACAAGAATGTTTATAGAGCTGAAGAA
GTGCTCGCCGAAAAAAAGGTTTGTTGTTATCTTGtaaattttgtttgtaa
actgtgagatttattttttatattctttttactttttttcatttttgaat
ctttttttttgttcgcgatTGAAAACCAAGTGGAGGAGAATATAACTTTT
CAACAGAGAAGAAGTGTTGATTAGAATTTTCTAGAAAATTTTTTGTCGTT
GTTTTAGATTGGAAAAAGAACTTACTATCTTGTGATGTGGTACGGCTGGG
GAAGTGACGATTGCACATGGGAACCCACTCAAAATTTATTGGACGTCAGA
CTTTTACAGTAAgctgataatttttttcatgacttttctcttttatttat
tGAATGTATTAAATGGATTGTTTGATCTGTCGAAGCTAAGTGGGAAATCT
TTTGTGCTTATATCACACTTTCgatattttttcaactttttccaaattta
attttcacagCTTTTGGGAACATCCAGCACCTGACATGAGGCAAGTTGAT
TATTATGTTGAGCGTCTACTCTCTTGCTTTGAGACCGCCCTAAAAGAGCG
ACTGCGAAGTGTGAAAGTTCTGGACTTTCCAGTAGCTATTTTTCGGTATC
TTTTCCATGGGAGGGGGGTGGATAAGAAAAGAGGGAATAAATCTCTCAAT
GAGGAAGATTTTGATCCTCACTGGTTCCCCAACAATTGGCATTCTGGGCT
CATAAACAAGAGAGGGACGAAAAGGATTATTTTATTTCCTGTGGTTGTGC
gtagttttttatcaaaatccccGAAGCTCTACCAGAAGCATAAATCTGGT
GAGGTTAGGGAGAAAAAACAACGCATAATTCAGAGGCTTTCAGTCACTAT
TTTTAAAGACACTTTTAATTCTTATTAATTATTCATAACTAATCTTATTT
TATGGAAATATATATGGAAAATAACCTTGCAAGTTTGGCTGGTTATTATG
GTTGTAGTTGCCCTCTAAGATAGGCAAGGGAGGAGATAGACAAGCTATAA
TTCAAGAACTTGATAAATTAGATTGTAAGATATCACGTTGAAACATTTtc
acgtttttctttttcttttcatgtcTGGTATATCTGAGGAACATTGCATT
TCAAAAGTCAAACAGCTAACTTCAAAACTCACTGTCAAATGGTAAGTAAA
ATATAaaagattcttataaaatatataaacataaacattatgAAAAAGTT
GGTCTGCCAGTTGAAAGTTATTCTTCGGACCTCACATATCGTCTCTTTTG
CCTCGAATAACCATCTTCTTCAAGTTTTTGTGCTCTTTTTTCAACTCTCA
AGAGATTAATGCAAGCCTCTTTTCGATTGATCTTGCTGTGAAAGATTTTC
CGCAGTTGGTCATTCTTCTTTTCCACACCTTTGAATAAAGATAAACAATT
TCTGTCAGGATAAATTTGTAGATATACTAAACCTACTTTGACATACTAAA
CCTTTTAACATTCTTggttaattaaaattttagctttATTCTATAAAGGA
TTTACAACAAGCTCTTTTTAATGCTTATATTgaattaaaattattaaaaa
tttagatGAACAAATTGAGTAGTTATCACATACCTTGTCCACTAAATAAT
CTTAAGGTTCCAAATTCTCTCAAAATTTCTGGCACGTGCTTGCACATGAT
ATGGATATACGGTGTTACTGGATTATTCCAACTGTACCCACAACCATTCA
TTTTCTGTAACTTATGAATCCATTCTTTGGCCTATAAAGAAGTATAAATT
TAGTGTTCAAAAGAGATTCTGTTATTTCATAATATCTCTTTTCCTGGGAC
ACTATGAAATCCACTTAAAAGTGTTTCAATCAGACATCAATGATAAATTT
GATCAATCTTCTATTGTAGATTATCATCACCTTGTTCTCGAAAACATCAA
TTTCTTCTGCACTGAGTGATGGTCGGTTCATCGTGTTGTACAAATGTTCA
AAGTCCTAAGAGATAAAGGTAACTACTATTTTTGAGACTGTTCTTTGGAT
TTGAATAAAGTAAAGTAGACTCCTGAATTATATTCAAAGCATTAAGAATG
CCTCCACTTAAGCATTTAACAGGCAACTTACATTCCACAATTCTTTTGTT
GGTTCAACCTGCGCTGGTGgtaaaaattcatgaaaatggCTTGGTAGCTT
CCGGAGcattttctttttatcatttccCATCAGGGAGGTCCATTCATAGT
TCTTGTCCTTTTTGTCTTTCCAGAACTTTAAGGTTATCCCACATCCCTTC
ATTGCACTGATCAAGGCTGTCTGCCCTTTGTTGTCTCCATTTTTCTGAAA
AGGAATTTGTATCTATTAAGAGGGCTTATTCAAAAGTAATAGATATTTGA
GCTATGAATTAAGATGGGTCTTTTCTAACTCTAAAAGTAGATCAAAGAAA
GAAGTCCAAGAAAAGTAATTAATTTTTACAAACCTACCTGATCCTGATCT
ATGATAGTATGGAAGAGACCATCTTCAAGTCGGTCTGTAACTCTTAGTAG
TAGATGTAACTCATCTACCATGTATTTACACAATGGCACATTTTCAAATA
TACGTTTGGCTTTGACTCCAGGCTGGGATGTCCAATTCTTTGTCGTTCTT
GGTTTTCCAGTCTTTTCAGGATCTTGTCTAGAAGTAAAATTTGATAAcct
ttgactttgattttcaaaataaaacaatgtttAAAACTCAGATATGTGGA
TAAATTTCTATCTATTTTCTTATAGGGGTATTGGTTACCTGTCTTCTGTT
GATATGTCACAGTATATACACGAATGTTTCGATGTGGCAGCCTTCATACC
AAGGAGTGTTAACAAGAACTGAAaggtaaatttagttttttaagtaaaac
aagccttgcttgaaaaaagaaagaaggtTTTTCGATTTATTTCAGTATGC
TTGGGGAGTCTtttctatttgaaaaaaatcctcTTACCTTGTAATCTCCA
CCAATCATCAAATCAATTGGGATGTCTCTCCCATGAGTACGAATTGTTTG
GTTTTCACTTATAGTGTGTACATCATTTATGATATCAGCAAAGCTTGTTG
AAATATCGTCGTAAGATTCGTCAACCATGGCCACCGCGATAGCGTTATTG
GCTGTAATGTTAAAAAGAGTGTTTATAAAAGGATATcctataattttttt
aagttttggtCAACCACACTACACCGCTCATTTTAAGTCTTGTCTTTAGC
atgatttttcctttttatacCTGACGACTTGAAATGGTTTTCTTTGTCTT
CTTCCAGGATTGTATAGGACATCACCACGAGATTCGATTTCCTTGTCAGC
TTTGTACCATCGCCACTGATCTTCAACTGAGATATAAGGTAAATATAAAA
GTTTGTCGTTTCATATTAGCGCCAATGCTCCCTCTAAGTTTTTGAACTTA
TAATTGTGTATCTTTATTTACTTGGTTTTTGAATTTCAGTTTAGGCCAAT
TACCTTAGCGATCCCTTGGGTGATATCCTTCAACCGAATGTCATTTTCTA
GTTCTCCTAGTAGGGAACATTGAGCTCCAATTGCCTTTCCAGGCGTGTTG
TTGATATCAAACAGCAACGCCAATTCTTTTTGAGTCTTCTCAATGTTGTG
CGTTCGTGGCAAATGTTCGCCCAGTTGAGTAAGCTCGTGGTATGCTTTTA
AGGATACGTTGTATCTATCGAGGACATACAAAACTGCTTTTTCTCTTTCA
GGTGTAGATAACGTTGTTCCTGAAGTAAATGAAGAAGAATGGACGAGTCA
TACGAAACACCTCGGAAGAGTCTAAAGATTACTATCCAAATTACAAAGAA
TGGACGAGTCATACGAAACACCTCGGAAGAGTTTAAAGATTACTATCCAA
ATTACAGTTCAAATAAAAGTTACCATTTCTCCAAACCAGTGGATTGATTT
CTAAATTTGTTGGTTCGTCGTCTTCTTGACTCGCTGTTGGTTCGTTGTCT
TCTTGGCTGGATGTTTGCTCGCCGCCTTGACTGGTTGTTGGCTCGCCGCC
TTGACTGGAAGTTGGCTCGTCGCCTTGACTGGAATTCTGCGATCCTGAAt
acaattatgaaataaaatatattagCATTGTCTCTCCATTCTGTTATTAT
ATACTCCCTTACACCCGACCCAGATTATCCCTTTGTTCTCCTTATCCCTA
CAGCAAACTTACCAGAAAATTTAAGGGAAATCTTTGTCCGCGATGGTGTC
AATAGTTTTATCTCTTGTGGTACAAGACCAGATTTTTCCGCCGTTTCAGT
CATAGCTGACCTAAAAGCAAATAAAGTTAAACGTTCAGTCCTTGGTCTTA
CGGTGCATTTTCCTTATCAAAATTGGTAATAAATGTTGCTCTAAAAGAAG
AATTCCTACTTTATTTGAGATATTCTCCTTTGTTGTTGACGTTTTCCGAG
GTCGGCGAAATGTTTGAGTTTCTTCGTANTTGAGATATTCTCCTTTGTTG
TTGACGTTTTCCGAGGTCGGCGAAAGGTTTGAGTTTCTTCGTATCTCGTG
GCTGatattagaaatagaaatttttagttCGATGCGTAGAGtggacaaaa
atcttttttttcaaagtcatGGTGGGTGGGGCTTAAGATTGTCGACAGAT
CTATTTAATCTAAGGTATTTGATAAACGGGGGGGGACCTAATAAAAATCC
CCAACCTTTCACATGACCCAATAAGGTTCACTCAACGGTATACGAATCGG
ATTTACCTCGGGCGTTGAAGGTGGTTCCATTCTTCCAGCATTGGTTGGTG
TAAAAAAGTGCCATTTCTCTTTTACCATCCTTCTTTTGACAGAACTTTTC
CCCTTTATTTGTAACCGCAGCTTTTTGCCGAGCGAGTAAATACATCTATA
AATTCGTTCATCAATCTCGACACTAAATCCAATTTTTCTAAGAAGCCCTT
CAAAGTACCCCTTTGCCTCTACATACGTCAACGTCGTTGCATATACCGCC
AAATCACCTCTAACCTCTACAGTGGGTTTTCTTTGGTCAACCTTTGAACC
GTTCGTATAATTAATCGAATTATTGAAAGCCATATTtctttattgaattt
tatttgtaaagaaGAAAAACGTTAAACGCACTCAACAAATTTATATACTT
CGCTTGGCGtcacttttctttttcgaaggttttgtttatttaatttcTAA
GACGATCCGACGTCAATTGAAATAGCCTCATGTTCAGGCCGAAAATGCCA
TTGGTTCTCCCGTAATAACCATATGATCATTGTACAGAACGAGAAAGCTC
TCGGTATTTGTTCGGTTTTAAACACGCAATAATGAGGGTTTTCCTCTGAT
CAAAACATACATTCGAATGTTAGGCGGAAAACCCAAAGCCGTACTACcga
ttttaaaagccaaaatGCCACATGACTTTCTGTTGGAACCATATcattat
tatacatttttggaaagagGAGAGGATGAAGAATTAGATTATGCttgtat
tttaaaagtttttatatcTCCGAATGTTTTCTGCCTTGTCAAAGATAGCT
ACTTTTTTTAGAAATGACCGAAATGAGTCTTGTAAAAAAGAGTAAATAAA
ATAGTCTAGGATTCGAAATTTTTGGTCAGAAAAAAGACATAAGTAAACTG
AAACATCTTTTCGTTCGATACAGTTGTTTATTTCgtaaaaaatagcaaaa
cataTATTAtaataaagcaaagaaaaacatataCAAAACTGAAAtgttct
ctttttcttttttgacgttacTTTTCGAACGCAAACCCCCGGATTTCTAT
AAATATACAATTCGAACGTCACTGTTGCAGTGCAACATTCGACGCGATGA

Coding sequence (CDS) from alignment at sc0000066:406184..412433+

>TCONS_00006272 ID=TCONS_00006272|Name=TCONS_00006272|organism=Clytia hemisphaerica|type=CDS|length=2007bp|location=Sequence derived from alignment at sc0000066:406184..412433+ (Clytia hemisphaerica)
ATGTCTCAAAGGTTGAAACAGAAAGCTCCAGTTTATTATAAAGGCCTTAA
TAATTCCAGCACAGCTACAGAGCTGGAAATTTTGGACACTGGAAGGAAGA
GAAACAACAAGAATGTTTATAGAGCTGAAGAAGTGCTCGCCGAAAAAAAG
ATTGGAAAAAGAACTTACTATCTTGTGATGTGGTACGGCTGGGGAAGTGA
CGATTGCACATGGGAACCCACTCAAAATTTATTGGACGTCAGACTTTTAC
ACTTTTGGGAACATCCAGCACCTGACATGAGGCAAGTTGATTATTATGTT
GAGCGTCTACTCTCTTGCTTTGAGACCGCCCTAAAAGAGCGACTGCGAAG
TGTGAAAGTTCTGGACTTTCCAGTAGCTATTTTTCGGTATCTTTTCCATG
GGAGGGGGGTGGATAAGAAAAGAGGGAATAAATCTCTCAATGAGGAAGAT
TTTGATCCTCACTGGTTCCCCAACAATTGGCATTCTGGGCTCATAAACAA
GAGAGGGACGAAAAGGATTATTTTATTTCCTGTGGTTGTGCgtagttttt
tatcaaaatccccGAAGCTCTACCAGAAGCATAAATCTGGTGAGGTTAGG
GAGAAAAAACAACGCATAATTCAGAGGCTTTCAGTCACTATTTTTAAAGA
CACTTTTAATTCTTATTAAATGTCTCAAAGGTTGAAACAGAAAGCTCCAG
TTTATTATAAAGGCCTTAATAATTCCAGCACAGCTACAGAGCTGGAAATT
TTGGACACTGGAAGGAAGAGAAACAACAAGAATGTTTATAGAGCTGAAGA
AGTGCTCGCCGAAAAAAAGATTGGAAAAAGAACTTACTATCTTGTGATGT
GGTACGGCTGGGGAAGTGACGATTGCACATGGGAACCCACTCAAAATTTA
TTGGACGTCAGACTTTTACACTTTTGGGAACATCCAGCACCTGACATGAG
GCAAGTTGATTATTATGTTGAGCGTCTACTCTCTTGCTTTGAGACCGCCC
TAAAAGAGCGACTGCGAAGTGTGAAAGTTCTGGACTTTCCAGTAGCTATT
TTTCGGTATCTTTTCCATGGGAGGGGGGTGGATAAGAAAAGAGGGAATAA
ATCTCTCAATGAGGAAGATTTTGATCCTCACTGGTTCCCCAACAATTGGC
ATTCTGGGCTCATAAACAAGAGAGGGACGAAAAGGATTATTTTATTTCCT
GTGGTTGTGCgtagttttttatcaaaatccccGAAGCTCTACCAGAAGCA
TAAATCTGGTGAGGTTAGGGAGAAAAAACAACGCATAATTCAGAGGCTTT
CAGTCACTATTTTTAAAGACACTTTTAATTCTTATTAAATGTCTCAAAGG
TTGAAACAGAAAGCTCCAGTTTATTATAAAGGCCTTAATAATTCCAGCAC
AGCTACAGAGCTGGAAATTTTGGACACTGGAAGGAAGAGAAACAACAAGA
ATGTTTATAGAGCTGAAGAAGTGCTCGCCGAAAAAAAGATTGGAAAAAGA
ACTTACTATCTTGTGATGTGGTACGGCTGGGGAAGTGACGATTGCACATG
GGAACCCACTCAAAATTTATTGGACGTCAGACTTTTACACTTTTGGGAAC
ATCCAGCACCTGACATGAGGCAAGTTGATTATTATGTTGAGCGTCTACTC
TCTTGCTTTGAGACCGCCCTAAAAGAGCGACTGCGAAGTGTGAAAGTTCT
GGACTTTCCAGTAGCTATTTTTCGGTATCTTTTCCATGGGAGGGGGGTGG
ATAAGAAAAGAGGGAATAAATCTCTCAATGAGGAAGATTTTGATCCTCAC
TGGTTCCCCAACAATTGGCATTCTGGGCTCATAAACAAGAGAGGGACGAA
AAGGATTATTTTATTTCCTGTGGTTGTGCgtagttttttatcaaaatccc
cGAAGCTCTACCAGAAGCATAAATCTGGTGAGGTTAGGGAGAAAAAACAA
CGCATAATTCAGAGGCTTTCAGTCACTATTTTTAAAGACACTTTTAATTC
TTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003582XLOC_003582Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006272-proteinTCONS_00006272-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006272-exon-sc0000066-1491911889:406184..406651TCONS_00006272-exon-sc0000066-1491911889:406184..406651Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:406184..406651TCONS_00006272-exon-sc0000066-1510915933:406184..406651Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:406184..406651TCONS_00006272-exon-sc0000066-1575043694:406184..406651Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:406841..406941TCONS_00006272-exon-sc0000066-1491911889:406841..406941Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:406841..406941TCONS_00006272-exon-sc0000066-1510915933:406841..406941Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:406841..406941TCONS_00006272-exon-sc0000066-1575043694:406841..406941Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:407094..407774TCONS_00006272-exon-sc0000066-1491911889:407094..407774Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:407094..407774TCONS_00006272-exon-sc0000066-1510915933:407094..407774Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:407094..407774TCONS_00006272-exon-sc0000066-1575043694:407094..407774Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:408503..408601TCONS_00006272-exon-sc0000066-1491911889:408503..408601Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:408503..408601TCONS_00006272-exon-sc0000066-1510915933:408503..408601Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:408503..408601TCONS_00006272-exon-sc0000066-1575043694:408503..408601Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:409359..409458TCONS_00006272-exon-sc0000066-1491911889:409359..409458Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:409359..409458TCONS_00006272-exon-sc0000066-1510915933:409359..409458Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:409359..409458TCONS_00006272-exon-sc0000066-1575043694:409359..409458Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:409891..409971TCONS_00006272-exon-sc0000066-1491911889:409891..409971Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:409891..409971TCONS_00006272-exon-sc0000066-1510915933:409891..409971Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:409891..409971TCONS_00006272-exon-sc0000066-1575043694:409891..409971Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:410335..411033TCONS_00006272-exon-sc0000066-1491911889:410335..411033Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:410335..411033TCONS_00006272-exon-sc0000066-1510915933:410335..411033Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:410335..411033TCONS_00006272-exon-sc0000066-1575043694:410335..411033Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1491911889:411099..412433TCONS_00006272-exon-sc0000066-1491911889:411099..412433Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1510915933:411099..412433TCONS_00006272-exon-sc0000066-1510915933:411099..412433Clytia hemisphaericaexon
TCONS_00006272-exon-sc0000066-1575043694:411099..412433TCONS_00006272-exon-sc0000066-1575043694:411099..412433Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:406184..412433 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.6468	10.6077	3.89222	3.07549	1.92751	1.55991	4.26576	3.87474	11.1923	6.3935	15.7972	13.864	13.2567	13.3512	15.6904	10.4361	13.1855	15.0978	10.8816	11.9378	17.7498	20.1059	11.4916	14.5083	20.7838	28.6332	16.8554	21.5915	28.4473	21.4187
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR016197Chromodomain-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006272 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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