TCONS_00006272-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006272-protein
Unique NameTCONS_00006272-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006272-protein ID=TCONS_00006272-protein|Name=TCONS_00006272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MSQRLKQKAPVYYKGLNNSSTATELEILDTGRKRNNKNVYRAEEVLAEKK
IGKRTYYLVMWYGWGSDDCTWEPTQNLLDVRLLHFWEHPAPDMRQVDYYV
ERLLSCFETALKERLRSVKVLDFPVAIFRYLFHGRGVDKKRGNKSLNEED
FDPHWFPNNWHSGLINKRGTKRIILFPVVVRSFLSKSPKLYQKHKSGEVR
EKKQRIIQRLSVTIFKDTFNSY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003582XLOC_003582Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006272TCONS_00006272Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 39..91
e-value: 6.3E-9
score: 45.7
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 40..83
score: 11.435
IPR023780Chromo domainPFAMPF00385Chromocoord: 41..81
e-value: 2.1E-9
score: 37.0
NoneNo IPR availableGENE3D2.40.50.40coord: 29..114
e-value: 1.5E-11
score: 43.4
NoneNo IPR availableCDDcd00024CHROMOcoord: 39..88
e-value: 1.18102E-6
score: 43.0215
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 34..87

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006272-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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