TCONS_00006256 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00006256
Unique Name	TCONS_00006256
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3945

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000066:332034..346154+
coding sequence from alignment at sc0000066:332034..346154+

transcript sequence

>TCONS_00006256 ID=TCONS_00006256|Name=TCONS_00006256|organism=Clytia hemisphaerica|type=transcript|length=3945bp
tttagaatgaGTGAAACCTatggagaagaaaaaaatcctaAATGAAATCT
ACAAGACTGAGAAAAGTTACTTGCACCATTTGGTTTTACTAAAAACCTTA
TTTTTGGAGCCATTGAAAATCTCATCAGTGCTACCAGCTCGACACATTGA
TGGAATCTTTTCAAATATTGAGGCGATCTATCAAGTCAGTGCTCACTTGT
TGGAGCTGATGGAATCTGAAGGTGTCATCCATGCCCTATTAAACCTTGCT
CCATATCTCAAATTGTATTCACTCTATGCCAATAACTTCAACACATCCAA
TAAACTATTAGAGGAATGTCTAAAGAATTATCCAGACTTCCACAGACTGG
TATCATTTCAAGAGACGCGAGAGGAGATGCAATGTTTGAAACTATCTGCA
CTTCTTGTTACTCCCATTCAACGTGTACCAAGGTATAGACTTTTAGTCGA
AACACTTTTGGCAAAGACACCAGCAGATgcaattgattttaaaaagctca
aagATGCATACAACAAACTGAATGAAATAGCTATTCACATCAACGAATGT
GTCCGACagcatgaaaatttcatgacCATGTTGGGTATTCAGAACcgttt
ctctggaaatcaacgACCACAAATTATTGCTCCAGGAAGGAAGTTCTTGA
AAGAAGGAAATCTCACCAAGATCACAACAAGTGGTCATGTCAAACTTCGA
AAAGTTTATCTCTTCAACGATATTCTTCTCGTCGCAAAATGTGAATCCAA
TGGGTTGTTATCTTGTCGTGAGATTTTTGAATTGAACGATTCAATCTTCG
AAAGTGTTTTGGGAAACACTTCCAACGGCAATGGAGTGTTCAGGaTGATA
GACAAGAAGAAGAGTTTGGTTTTATGTTGCATGGAAGAAACAAATACCTG
GGCTTCGGATATCAAAAATGCTATTCAGAATGTACATTGCACCTCGAATC
GATTCATCTCTATTGAGAATggtgaaaagaaaagaattttcctGAATGGT
GCCAAGaCCAGAGAATCGcagaaatcggaaaaaatgttgaaaaggcaAAC
AGTTTTGGAGAGCAAATCCACCAGCTCCATCATCGCATCAAATGCTGCAA
ATAACAACAACAATGTCTCATCTGATGCCAATCATTATTACCATAAAAAc
gacaccattgattccacgaTCACCAGCAAGTGGCTTCACAACAATACTGA
CTCAGCGGTCTTTGAATCCGGACAGCCAAGTGTTGCCATTGAAAATAGCA
ACGTAAATAATGGAAGTGGCACTGCTGCATTCAAACAACATTGGAGTTTA
AGTTTCTCATCAGGGATAGAGAACCGACCTTCCATCAGGTCTTTACGTGG
TAGCATCCAACAAATCATTAGTTGTTCCCCTTCAAAACAAACAGAAAACT
ATGCACAATGATTCAAATGATTATGGgaCGGGGATTGGGGAGAATCAAAA
GGACCAATCATATTCAAGTTGCAGAGTAATGTTTGAATAATGTATTCAGC
TTCGGCGGCTGTTGGCAACTCCTTGAACTGCTCACAAGATGACAAAGATG
ATAAATGGCGAAAATATAGCAGCTCCACCGAAATTGATCATCGAAACTTT
CGAAAGGAAATGGTTCAGAATGGACCATCTATCACAAAACACCATTCAAT
CACAACAGATCTTAGCGGAGACCAGAGCATACCGGACCGTGTGGTCGTTA
ACGTGTCCGGACTGAAATTCGAAACTCTGTCCGAAACATTGGAACAGTAT
CCAGAATCACTCCTTGGCAATGAAGACAAACGAAAAGCTTATTTTGACGA
AGCacgaaatgaatattttttcgaTCGTAATCGACCTGCGTTTGAcgcta
ttttattttattatcaaTCAGGTGGCAAATTATTAAGACCACCTAACGTC
CCTATGGATGTATTTGCTGATGAGATTAGATTTTATGAACTTGGTGACGA
GATTCTTCAACGTGTAGAACGCGAAGAAGGCTATATAGAAGAAGAAGAAC
CAATTTTCCCTGAACGGGAATGGCAGAGAAAAATATGGGAGCTTTTTGAA
TATCCAGACACTTCAATTGGAGCAAGAATTGTTGCAGTTATTTCAGTGTG
CATCATCACCATATCTATTGTAACCTTTTGTATTGAGACACTTCCGCAGT
TCAGATATGAGAAATTCAATTGTACAAAAATGGGGAATGGTTCGACAGTT
TGTCAAGAGAGAGAAATTCGAGATGATAAAGCTATGCCATGGTTTGGTAT
CGAATCAGCGTGTATTGTTTGGTTTACATTTGAATATATCATGAGATTCA
TTTCTTCACCACAAAAGTTAGTCTTCGCAAGATCTTTCTTAAATTTGATA
GATGTTATTGCAATTATTCCTTATTATATCACGCTACCAATGAAAACATC
CAATGTATCTTCACTCGGAGTATTGAGGGTCATTCGATTAGTACGTGTGT
TTAGAATTTTCAAGTTATCACGACATTCTCGTGGCTTACAGATCTTGGGA
CATACTTTACGTGCCAGTTTACGTGAATTGGGATTGCTCATCTTTTTCTT
GCTCATTGGTGTCATCCTCTTCTCTTCGGCCGTTTATTATGCTGAAGGTG
GCgagaaaaagactttcaaatCCATTCCTGATGCTTTTTGGTGGGCTGTG
GTTACCATGACGACTGTGGGTTATGGAGACATGAAGCCTGAATCCGCATG
GGGAAAGATTGTTGGTAGCCTGTGCGCTATTTCTGGTGTCTTAACCATTG
CTTTGCCCGTTCCTGTCATTGTCTCCAATTTCAATTATTTCTACCATCGT
GAGAACGAGCTTAGAGCAGCCGAAGCATCACGTaaagaaaaggagaaaaa
agaacAAGAACAGCGACAGAAAGAACAgaaagaacaagaagaaggagaag
cAGAAGAAGAAACGCTATTGGTGGATGGAAAAACCAAATTACCTAACGAT
ACTCGAAGTAATGGTCTACACGCTATCAATCGTAATGATGAGAAAGAGCT
CACGCTTAGTAAGGAGGATATAAATGATAACAAAACAAGCGGTCATCATT
TTATCGAGAATAACCATCCAGATATTCGACTCAATATTAATGGTGAAGAG
GAACACGACCAATTACTCGTTAAAACCTTCAAAGGGTCCAAAGAGAATAT
CAACTTTGAGACCGGGTTATGAATAAGTGAGTTCTACTAAAAGTGAaagg
ttttcaaaaaatgtgtgtaTGCCTTATATAAGATAAGGCTGCGTACACAC
GCTGTAAGGTGGTGTATTCACATCTAGCTCTGATTCTTCAAGAGTGCTGA
ACCCGAACCGAGAGAAAAATGAACTGCGCATTTTAAATTATaacgattta
atttttttaagttacCCTTAAATTAACTGTATATTATTAAAGGCTTGCTG
TCTACAGCTTACAGATGGACAAATAAATCCGCGGCGAATGGATATGGACG
AATGAATGAATGGCCTGTATTTTTTTACCTACTACTATTACGTTACGAAA
GAACAGTTTCTATAACGACGCCTGGTCGAAAGAGCtgacaaacaaaaaac
aatgaaGTTAATTGACATGTAAAATCAACCGTTATAATTTTAAGAAAtac
ttaatttttcgaaaaagaaatcgaaTTTTATGCTTCACTGCAGGGAAAAA
TTATGAATCAAGAATTTATTTGAAATGAATAACTTATTactaatatttat
ttttcttactttgcagtgttttttttcttgttacCATTTTTAGTGTAAAA
AGTttaatcaaatattttcaaatagttCCCAAACCACTTGGAAACCATGT
TAGAATAATTGACTACGTTCAATGGTTCAATGCCAGCTGGGATACAAGTA
CACATTTTTATAAACCGACCATAAAATTGCTTTTAAATGGAAAACATCCT
TTGATTTTGGAAATTCTGGgattttttcttatatttaaaTTTATG

Run BLAST on NCBI

protein sequence of TCONS_00006256-protein

>TCONS_00006256-protein ID=TCONS_00006256-protein|Name=TCONS_00006256-protein|organism=Clytia hemisphaerica|type=polypeptide|length=560bp
MYSASAAVGNSLNCSQDDKDDKWRKYSSSTEIDHRNFRKEMVQNGPSITK
HHSITTDLSGDQSIPDRVVVNVSGLKFETLSETLEQYPESLLGNEDKRKA
YFDEARNEYFFDRNRPAFDAILFYYQSGGKLLRPPNVPMDVFADEIRFYE
LGDEILQRVEREEGYIEEEEPIFPEREWQRKIWELFEYPDTSIGARIVAV
ISVCIITISIVTFCIETLPQFRYEKFNCTKMGNGSTVCQEREIRDDKAMP
WFGIESACIVWFTFEYIMRFISSPQKLVFARSFLNLIDVIAIIPYYITLP
MKTSNVSSLGVLRVIRLVRVFRIFKLSRHSRGLQILGHTLRASLRELGLL
IFFLLIGVILFSSAVYYAEGGEKKTFKSIPDAFWWAVVTMTTVGYGDMKP
ESAWGKIVGSLCAISGVLTIALPVPVIVSNFNYFYHRENELRAAEASRKE
KEKKEQEQRQKEQKEQEEGEAEEETLLVDGKTKLPNDTRSNGLHAINRND
EKELTLSKEDINDNKTSGHHFIENNHPDIRLNINGEEEHDQLLVKTFKGS
KENINFETGL

Run BLAST on NCBI

transcript from alignment at sc0000066:332034..346154+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00006256 ID=TCONS_00006256|Name=TCONS_00006256|organism=Clytia hemisphaerica|type=transcript|length=14121bp|location=Sequence derived from alignment at sc0000066:332034..346154+ (Clytia hemisphaerica)
tttagaatgaGTGAAACCTatggagaagaaaaaaatcctaAATGAAATCT
ACAAGACTGAGAAAAGTTACTTGCACCATTTGGTTTTACTAAAAACCGTA
AgctcaaaatctttcaaattttagtctttTAGTATTTATATTTGACATTT
CTCTGCTTCATCTCCTAATTATATTAACCTGTCTACATTAAGTTTTCTGA
AAATGATAATGACTGCCTCTTTTGGatataaaatattctgaaaacttttg
acaatctgtcaaaaatttaaaattcagctatctgcaaaatataggacata
tttttttattattttcatccaTAGTTATTTTTGGAGCCATTGAAAATCTC
ATCAGTGCTACCAGCTCGACACATTGATGGAATCTTTTCAAATATTGAGG
CGATCTATCAAGTCAGTGCTCACTTGTTGGAGCTGATGGAATCTGAAGGT
GTCATCCATGCCCTATTAAACCTTGCTCCATATCTCAAATTGTATTCACT
CTATGCCAATAACTTCAACACATCCAATAAACTATTAGAGGTAtcatttt
gagataaatttcaattaaattcaaattattttctagAAAGCTTTTCTTCT
TTGCTATATCCCTAGAGAATATATTATGTTTGTGTTTGACGGCTTAAAAT
TTACTATTATTCATCAGATTATCCTAACTTACAGTCTTCTCGATTTACAA
TCCGTTCAGAAGTGACTTCCACTTAAAtgtcattttctgaataatttgtA
GGAATGTCTAAAGAATTATCCAGACTTCCACAGACTGGTATCATTTCAAG
AGACGCGAGAGGAGATGCAATGTTTGAAACTATCTGCACTTCTTGTTACT
CCCATTCAACGTGTACCAAGGTGTGTTTCTACTTTTTATCTTTACACAGA
ACCCAATAAACTGTAATTTGCTCATAAGAAGATTTTTTCTACTCCTagtt
taaaaatgaaagttgtaTCTAGGCTGGGTACTTATGATACaattaaaaat
catttgatCATACTTTTAAGctaaatttttaaacattaattGTTTTATAC
AGGTATAGACTTTTAGTCGAAACACTTTTGGCAAAGACACCAGCAGATgc
aattgattttaaaaagctcaaaggtacaaatttgaatattacttaaaggg
ataatcagatggtttgagatatttagattacagaaaccttcctgtggtcc
ttagtaaaacctcgaagtatttttgtgtaataaTTTTCCAATTAatcgag
atatcaaaattttaaatttttgaaaacgggttcttacacggttcttacgt
tgaaattctattgttttcatcgTAAAAGCCAAAAACTAGTAGCTTAAATA
TCTCGACTAAGGAAAATAGTCAGGCAAAATAATTTAGgattttgctcagg
acaatagaaggatctcacatgccaaatattgcaaaccatctgattatccc
tttaaaagattgaaagataatttttatAGGCTGTTTCATTGGACACAGCA
GATAAATCAGGCTGGTAATAAATGAAATTATGTCAGAGGTCTTATGACAA
TATCACTTTGAAGAGGTATAGTGAATTTGGTGGAGTTGTTTCTTGGGTCA
TCATAAATTAAATGGAACCAATCCCCAAATTCACTGATTTTGATGTTTAC
ATATTGTATATCGttgaaaaaaactttagaaatttcttttcagACAATAC
AATATACAGTGTGTGGAGAAACAGAACATAATTTTCATGAATAATTCTCA
AAatctttattgatttttataaCCTTATTACTCAATAAGGTAACCTTGAA
ATTTCTTTCATCAAATCAGCGCATTTGTACCAGTTTTCAGTATCCTTATG
GTTTTAGTCATAAGGGGCCTGACTAAAACCTCTGATAAACTTCTCAGTTC
AAATTATATTAATTTCAGTAATAAACTTCTCAGCTCAAATTACAGGAATT
TTAGTTTCAAACAGATTCCTAAACATGCATTTTGTCTTTTTCACAGATGC
ATACAACAAACTGAATGAAATAGCTATTCACATCAACGAATGTGTCCGAC
agcatgaaaatttcatgacCATGTTGGGTATTCAGAACcgtttctctgga
aatcaacgACCACAAATTATTGCTCCAGGTACGATGCTGCGcttttttga
aagctttataAAGTGATTCAGAAAGTGGCTTCTTTTTCGCAAATCTATTA
TCTTAGAACCCTAGTGTACATATCTCCCAACTGATAAACCCAAACGTTTG
GTATCAGTTAAGTGGTAAAGACTTTGTTGTATAACCAGGGGATaagcaat
atttttaaaatcttataGTCGGGATTGGAAATTTGTCAACtcactctaat
tcgaacctctattattcgaatctttctgtaattcgaactaaaatagtGGT
CCCCTAACTGGAAAGTGGTTtcaattactctctgtaattcgaagaaCGTT
TTTGGGCTCATGAGGTccaatcgaattagagagagtcaactgtagttGGT
AAAATGCTGTACAGAAGATTTCTGATTTATAGCAGTATTATGAGTAGGCA
TCATATCCTGGATTGACAGGGGCAAATTAGAAAACCATGCAGTAAAAGTA
TCTAAGATTCTTGACCATGTAACAAATTGTTTAGATAGCCAATGAAAGAC
TAGATTTCTTCTTGTTTTAGGAAGGAAGTTCTTGAAAGAAGGAAATCTCA
CCAAGGTGACCatgctgtccaatattttcattttaaaccaAGTTTTCTGA
TGTCTttattctttgttttcttgaatTTACCACAGTTGATGATAAGCTAA
GAAAACATATACCCTATCTAGCAGAAACCTCTAAAGATAATATCAAAAAT
CCATCCTATATGGTGCTTTGCTTTCgaagtttttaccaaaatttgatatt
ttcaggtttttttctttccaatatatggcaaagattttcgaaaaatgagt
CCCATGCAGGGCTAAAATCATACTGCTTTCAAATCCTCTCCTTATATTTT
CCATCTATCTCATTTTGTAGATCACAACAAGTGGTCATGTCAAACTTCGA
AAAGTTTATCTCTTCAACGATATTCTTCTCGTCGCAAAATGTGAATCCAA
TGGGTAAATTTCTCTACATTATGTTTGTGATCACTGCGTTATCAAAATCC
AACCATTAGGTCGATTGTTGTTAATTTTACTTGATGTTTTTTGGCTTTAT
CAATTAAATCttttaccttaagtggataaattttcgcgtggacttttttt
cgcgaattaagaatctaaaaatttcgcgtggacaaaatttcgcgaatcag
cctctttttcaccCGATTTCTTTCATTATCCTAgaggttttggccaattt
ttagatttcaaatatttcgcgtggacaaaatttcgcgaaaacggccaaaa
ttcgcgaaaaccgcgaaaattaatccacgcaaaatttaatccacttaagg
gcAAAATATAGTGTTCAGAGACCAAGAAGTTAGGCTCCaaacttttctaa
aaatttggGAGTAATAAAAAAACGAGTCTTTCATGAGGGGATTATCTTTA
AATTAGAAGATTTTTCTGAGATGCTCTATATATGTTAGTCAAGGCTATGA
AGAGCCTGGTTTATTCCGAACGGCTGCCCAAATATTGGCGATCTGAAACA
CAGGTATTAACTTCAATATGGAAAAATTTCGTTCTCGTTTTAGGTTGTTA
TCTTGTCGTGAGATTTTTGAATTGAACGATTCAATCTTCGAAAGTGTTTT
GGGAAACACTTCCAACGGCAATGGAGTGTTCAGGGTTTGTCTTTGTGGTT
TTCCTGATTATTTCAACCTCTTGAAAAGGCTACATCCTCCAGTTAAAAAC
AGGAATTTATTGCCCCATTCTCAAAAGAAGCTAGACATTTTAATAATGAC
TCGGTTACTAGTTAACTACTGAAAGCCTTGACAAGTTTTAGGAAGTTCTA
TAAATTCAACtgagtttttattgaaatcaaactttgatggactttttaat
tgaaaacgaACTATTGAACCCAATACATAcatattgttgaaattttaatt
tttcttcagaTGATAGACAAGAAGAAGAGTTTGGTTTTATGTTGCATGGA
AGAAACAAATACCTGGGCTTCGGATATCAAAAATGCTATTCAGTAATCtt
tcaattttattcaaatttaacttCGCTTAAatatttagtattcagtttaA
TCAGGTTTAATAACTAGCCATTATTTAATCCGTTGCAACTTTGTCCTGTG
ATATGGGCAGGTCCCTAAGTAATCACTGCACCTTTaatgttgtaaaaaat
attctgtaactttttaaagattttggcTTCCAACAGTCTTTTGTGGTTTA
CGGTTAACCAGATTTAATAGCTAAAATAATTCCATTACTTTTTTTAGGAA
TGTACATTGCACCTCGAATCGATTCATCTCTATTGAGAATggtgaaaaga
aaagaattttcctGAATGGTGCCAAGGTTTTTGATTAGTTTCACGTTTCA
ATTCAAAACCACATTTCTCTATCATATCATAtatgatatttattttttat
attcgAACATCCTGGGTCCCCGCAACTGCTCATTTACCCGATTTCGAAGT
TTGTTGCAACGCTCTATATACTAATCCCTAGCACCATGGgtgatttttta
agctttttgaaaaatctggccGTGTGTTATCTCTTAGGGTTAGAGAAACC
TATATTTTGTCAGTACTAGTATGCAAGTAAATCGAGGGGAATGCAACCAG
CTTAATCTTTCCCGCGGAGAACTAAGATAACAGTTAACAtgatttatttg
atatttttgtagaCCAGAGAATCGcagaaatcggaaaaaatgttgaaaag
gcaAACAGTTTTGGAGAGCAAATCCACCAGCTCCATCATCGCATCAAATG
CTGCAAATAACAACAACAATGTCTCATCTGATGCCAATCATTATTACCAT
AAAAAcgacaccattgattccacgaTCACCAGCAAGTGGCTTCACAACAA
TACTGACTCAGCGGTATTCTTCATAATAAATTATGTTCCAACAATCTtaa
gtcaaatttttttctgattccgTTATTGTTTGTCTCGTGAAAGACAATGG
GAACTTATGACAATGTGAAGTTGCCCGCCTTCCTCCATAGACTTCAATGC
GTAATACTTGGCAAAGTTGCTTACAAATTAGCTGGAATTTATACTGAAAC
ACATTCTCGTCTACCCTGTTAGACAAAAACCACTTTTTTTATCGCGCTTT
ATCGTCTGTTGCTTTTTGCCGcggaatcgaatgtttttggaCGGGAAAGT
CCGTCCAAGATTTTCTCTTCAGCACAGCTCATTTTGcataaaacagataa
aaaatttggtttgtgggaaggtactggctaattCTTGTCAAGTTATCCCT
TATTAACGATCAAAACTATTTGAACGGTCCACAACAGTTCCACAACTCGA
ATCAATTTGGTTTCTCCATCTTTATTCTTCTTTCACGtgaccgggtagct
cagtcggtagagcattcgcctaacaatctaagggttgtgggttcgatccc
cggtcaccgccaactcagcggatgagtagcttagattgggtaatctgatc
taggcggtaagttactgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagttactgggagctgagag
taggtgtggcgctccacctcagcattcgatctcccaggtctagcgcaaat
agaaaaggggatagactccctcacttcCGGCttcgccgacagccaccaga
tgaatatacttactttacttttttttactctACACTATTCTTGGGACAGG
TCTTTGAATTCGTAAAAAATTATGTATTGTCAATGAAAAATGGCAGATTT
TGAAGTGTCTGTGCCAGGATTAGGATCTTGTTTTTCACACTTTACTTCAT
TATGACAGGTCTTTGAATCCGGACAGCCAAGTGTTGCCATTGAAAATAGC
AACGTAAATAATGGAAGTGGCACTGCTGCATTCAAACAACATTGGAGTTT
AAGTTTCTCATCAGGGATAGAGAACCGACCTTCCATCAGGTCTTTACGTG
GTAGCATCCAACAAATCATTAGTTGTTCCCCTTCAAAACGTAAGAGAAAA
ACTTCCGAGGCTTCTATTGTTCAAGAAAAAGTAAGTCCGTCTCTTGGTCT
AGTCTCTTTGTTCTTACTTATAAATTGCCAAATCCTACATAAATTCCCAA
ATCGAATTCTCATATTTTCAATATATGCTTAAAAGTAGGACAAACTAGAA
AATAGCTTTCACTTTGTATGGTGGCATAAAATTATGGATACACTAATGAA
TCTAGGATATCATCCAAAGTTCTACTTAATTCAAATctatatgttttatt
ttttatacagAAACAGAAAACTATGCACAATGATTCAAATGATTATGGGT
AttgtattttacttttttaatacTATTATGCATATTTTCAATCTTGTCAT
GTGTTAACATATTTTTATACCTTTTTAATGTCGCGACGGTTCATTTGCTG
GTCAAATAGCTGCCAAGGTAACTTGATATCCATACCTTATACTTTCAACC
GTAGCGACCGTAGCAGGAAGGTAGAGCACCCAGCTATGGTGTGCAAGGTT
ATGGGCTCGATCTCCAGCCTGgccataccaaagattctcaaaatggtact
tgatgcctctctgcttgatgctcagcaactaaagagacggatcaagggta
agtggagaaatccagggaaaggagtggcacCCTCCCAGACcctcgggtag
acagctagagaaaaagGAGTCCTTGGGTCGTcatcgactgcggtcgcaaa
cttacttatttTTAACTNGTCATGTCACGGTTCATCTGCTAGTCAAAAAA
GTTGCTTTAGTAACTTGAGATCTGTACTTTTATCcgtttatttctttgtt
ttcaggaCGGGGATTGGGGAGAATCAAAAGGACCAATCATATTCAAGTTG
CAGAGTAATGTAAGTTAGCTTATAAAATGTATTTTCTCTATTTATAGTGG
TTTTTTGTTAGataatttaatgatatttttgtactgtattttttgatttt
ttgtatgtttttgtatctttttttttttacttgggAGTAATTATTATCAA
GGGAATAGCTATATAGTCATATAATGAATCAAagaattggtcttattttt
cactttcgtgTTCAAGAAATATGTAACTACAGTTTGAAGATCTCTATAAT
TAAATGTTCTGTTATTCAAATACGCtcaattatttgataaaatcgaaaGT
CTAGAAACTTTCATAAACAAACtctactacatgttttttttttataagca
agtgtatgccccttggtcagggtcgtgtatgcttaagttctcaaagcatc
caggcctagtttatgcttattatatgcttaagaattatgcttatgattca
ccccgagccaagtttttaatgaaatttcagaaattttgtaaaaatttgtt
cagattttgggtgCAGTGGAATGTAATCTAGCCGtggaatttcttatttt
ttacttgacctctaccaaacttttttaaacagataaaaaatgacatcttg
aaaaatattttaagctgacatatatgctcatgttatgcttaggaattctg
caaatctgagccttcatatgcttataagcgttatgcttataaaaaaaaac
atgtattcgatacgctctcttattcgataaCAATTCAATTCCCTTTGAAA
ATTGTATTCGAGATCGTAAACTGTACATGAAATATAATGTTTGAAAGATG
AAAGGATTTTAAGCACCGTAAAATTAGTTTCTGATTAGCTAAAATACCTT
TTGATTTCACTGATCTGATCAAAAATTTATTAGAAGTTCTATATATTATT
TTGCTTAAGACTaattaaaatcttttactttaTCTATATATTTACAGATT
TGGCCCCGCTGTGCTATTTAAGCTAGTTAAACCTAAtagttaaaagtaaa
aaaaaattgaactaggAGTGTTCAGTTTCGCTCACGGAATGAAGATATTT
TTCTGCTTTCAGCGAAAAAATGTTTATCTAAGTTGGAAGGTATTTTTATT
TGTTGCCTTCTTAGAGTTGTTCGCATAGCGTCATCTGTCAAAACGTAACA
TGCAAAGGGCCATAGGAAAAAATTAAGGATTAAAATTTGTATGGATGTGT
TTGCAAGCGTTGCATAATTGATAAGTATCAAGATGTAAGATTAAGTGAGT
GTGGCCTCTTCGTGATCAATGAAATTGTATCTGAATTATTGATACTTTTT
CTGAATATCTACTTCAAAGAATGTTTGTAATCCTTGCATTGATAAAACTG
CCAATATTCTTAAACATTTCTTCACAGTTATTCATGTCTCATTCaggtat
tttttaaatattgaataaaaatggaagtttttctttttagattgtTGATT
CATTGTTTATTTTcagagtatttttttttttgcatggtATAATCTTTTTT
TCATGAAGAAAACTTGAAGGAAAAAGGGACGTTGGAAAGGAAGCAGGCTT
CAATTATACATGTTTTGAACACTAGTAGTCAAGTATACCTTTGTGTTTCC
TCTTATTGCCatcaaaatgttaaataaattaCAGAAAATGCAGACAAGTT
GACGAGGAAGACGgtgtttttggatttttctatTCAAAAGTGAAGGTTGG
TAAACGTCAAATCTGTCATTTGTTGATCAGTGACTGTAAAAAAAGAAAGG
TTTGACAAGGGAAAAAAGGagaaattttctcattttgaccAATTGATTAA
GTTGTTTCAACGAGTTGAGGTTGAGGAACATTttcaatgttgattttttt
ctgccaCATTGACCACAGAACATATACAAAAATTGAAGaccattttgaaa
ttctgttGAATAAAGTGGTAGTGTTTAAAACACAATCTTTCTGTTGTAGA
CTTCATGACTGATGGCTGTTTAATCGGCTtaaatttttctctattttcat
tttctccatCAGGTTTGAATAATGTATTCAGCTTCGGCGGCTGTTGGCAA
CTCCTTGAACTGCTCACAAGATGACAAAGATGGTAGGTTTCTTTTGTTAC
CTGACACCTTTTTATTGCAATAAAATGTTTAAGTTGAAGCATCGAGAGTA
TAAAAATTCGAAACCTTTAATATTAAGgactttaatatttttttcttgca
tttagaattctttttttgttgttgttagtTGTTTAGATTCGTTgaatatt
ttgagatatttacAAGTTAGTTCAATTGAAATGGTTGAATTAGTGCCTCC
TTCAACACCAAAAATTTCGTTGCTTTAAAATAGTACTGATCCTTAAGGCT
TATTCCTTTTCCCTTTTAGTAACACTAACTTTAAGTAGAGTGCCTTAATT
AGTTTTCCTAGGATCAATTATTAATTGTCCCCTGTGAACCATCTATAATG
CAGTGaaaataaaactgttaattaATCTTAATTATTTGGTTTTATGTAGC
CTTAgtttgagattttctcattaaGATGTTTTGAGTTTTGCCAATGAAAA
TGCCTTAACTATTTATGCAATGGGATGCCCTTCAATAGTTTGTCCGGGAA
AAAAAGTGGAACATTTTTTACATAGCTAAAAAGCCTGGTGTTCATTTGTA
TCGATGAGTTTGAAATTAGAACATAACATGCCATAAACCATGAGAATTTT
TATTTACACaattttttgtttcgattttttccggacacactgTGTAGTAA
CCCTTATTGAGGTTGCTGATTTTCGTGCTGTTGCTTCACCGTTGCTAGGT
AGCTTAGATGGTAATACTACACAAGAGATACTGTAATACACTTCTTGCTA
TTTCTTTATAGTGGTTTGTTGAAAATCTTGAGTTAAGTTCGGTATATCGT
ATATTCAATCTTCTCTTGCTTTATGTAAACTTGAGAAGAGGGTTTGATAT
CGCTATAATGTATTTTCAGTCGAATTATTCATGATTAAAATATGCCTGTG
TATGAATGTGTTTTGGATATCTTTTGAACGCGTTTTAGTTTGAAATGGAA
GGACGTCCTGTGTTGGCCTGACTGAGTGACTTTCTCTTCGGGGCTTGTTA
TTATATTTTGTGTTGATAAAAACGAGTTTCATTATTTCTTCCATTTTTGT
GTTTCTCGATTTTAATAGAATTTTAATAATAAAATAcgaagaaatgaaaa
tatttgattaGAGATAGGAAATTTAGTGTTTGCGCGGTGATTTACTTTTT
GAATTGTTGAAGAGGTACTCCGGAATTAAATTGTCCGTTTTTCTTAATGA
ACAAATTATTATTCTGTTTGTCATGATGAATCAtccttctttctttttct
tttcgtgTAAACAACAATTNAAGAAGTTTGCAATGatagagaagaagaag
aaatgttTTTTAGTACTAGCGACGTGCGACAggtgaaaagaaaacaaaaa
tatgaaaaaatagaaGAACAAAAAGTCAATTATGATTTTCCCCtttggtt
tttcttttcttttctcggCTAGTTCTTCTACTAGAGTAGTTTTGTATAGA
AAAATAAGTCGAATAATGAAGCTAACTTacgttatttgaaaaaaaagtcg
tAATTTGTAActctagaaaaaaaaaatatatgaagaCTCTATTTGCAAGT
CTAAAATGACGTTCTATTTTCGTGTTGAATAGCCTGGGTAGTGTGAATGG
TGCGATCGATCGAATCTGATGTCTATCTTTGAGCAAACATTTTTACCTTA
ATCAATAATATATTGATTTCTCTTTATTTGGTAAGAATAAGACAATAGAG
TAGAAGTTTTGTTCGAACAAGGGACAAGATCTTTTCATCGATACGTCTTC
CAGGTAGAACCtgaatgagaaaataatttcttctgtttttaaaattttta
ctcGATGTCTCCTTAACATCTTATTATACTGGTTGAAGAAAACGGTCTCT
TcgaaaaatctttgtttttttttcttcaattttcttctcATGTTTATGAG
TtggacatttttttgacttgCTAATAAACCTTTATTCCTGGTACTTTTCA
TCTTCCTCATATTATATATAAGGgtttttttcaacaatttttttctttaa
aaaaaaaacttttcacttaTGAATAATTCACATCTTCTGTTTCTTCTATC
AATTATTTAAAACGtaatataagaaaaattttccagCGAATAACTCGTCT
GTTAttatcttaaaagaaaaatcaaatttgtctTTTATTCGAGAAAAATA
TGGCATAGTTGTGTGTGAGGAGAGTTCTTTTTAACCTTGACAAGTTTACA
TTTCTTCATCTCTAACTGCCTTCCAACTTTTTCATTCGTATTCCAATACA
TTTTCCTATGATTTGGCAaaaactattttataaaaaacgttttattattt
tctctcTTATTCTCTGTATCTTATCTTTAGATAAATGGCGAAAATATAGC
AGCTCCACCGAAATTGATCATCGAAACTTTCGAAAGGAAATGGTTCAGAA
TGGACCATCTATCACAAAACACCATTCAATCACAACAGATCTTAGCGGAG
ACCAGAGCATACCGGACCGTGTGGTCGTTAACGTGTCCGGACTGAAATTC
GAAACTCTGTCCGAAACATTGGAACAGTATCCAGAATCACTCCTTGGCAA
TGAAGACAAACGAAAAGCTTATTTTGACGAAGCacgaaatgaatattttt
tcgaTCGTAATCGACCTGCGTTTGAcgctattttattttattatcaaTCA
GGTGGCAAATTATTAAGACCACCTAACGTCCCTATGGATGTATTTGCTGA
TGAGATTAGATTTTATGAACTTGGTGACGAGATTCTTCAACGTGTAGAAC
GCGAAGAAGGCTATATAGAAGAAGAAGAACCAATTTTCCCTGAACGGGAA
TGGCAGAGAAAAATATGGGAGCTTTTTGAATATCCAGACACTTCAATTGG
AGCAAGAATTGTTGCAGTTATTTCAGTGTGCATCATCACCATATCTATTG
TAACCTTTTGTATTGAGACACTTCCGCAGTTCAGATATGAGAAATTCAAT
TGTACAAAAATGGGGAATGGTTCGACAGTTTGTCAAGAGAGAGAAATTCG
AGATGATAAAGCTATGCCATGGTTTGGTATCGAATCAGCGTGTATTGTTT
GGTTTACATTTGAATATATCATGAGATTCATTTCTTCACCACAAAAGTTA
GTCTTCGCAAGATCTTTCTTAAATTTGATAGATGTTATTGCAATTATTCC
TTATTATATCACGCTACCAATGAAAACATCCAATGTATCTTCACTCGGAG
TATTGAGGGTCATTCGATTAGTACGTGTGTTTAGAATTTTCAAGTTATCA
CGACATTCTCGTGGCTTACAGATCTTGGGACATACTTTACGTGCCAGTTT
ACGTGAATTGGGATTGCTCATCTTTTTCTTGCTCATTGGTGTCATCCTCT
TCTCTTCGGCCGTTTATTATGCTGAAGGTGGCgagaaaaagactttcaaa
tCCATTCCTGATGCTTTTTGGTGGGCTGTGGTTACCATGACGACTGTGGG
TTATGGAGACATGAAGCCTGAATCCGCATGGGGAAAGATTGTTGGTAGCC
TGTGCGCTATTTCTGGTGTCTTAACCATTGCTTTGCCCGTTCCTGTCATT
GTCTCCAATTTCAATTATTTCTACCATCGGTAAGTTTACAACACTGCCTT
ActtattatttttcactttttactttGCTTCCTCATTTCTTAAGCTTTCC
TAAATATTGAAAATCCTTACTCTAAAAACATTGTATTTCCAAAAGGATGA
AAAAATTTACACCAGTTTTAAGTTTGTTCTTCCTCCCATACTTCCTCTTG
CATCTTCCTAAAAATTGAACGTGTAATCTGTTGATAAAGATCAGTTATCT
GATACCACTATTTTTCCTTCTCTAGTGAGAACGAGCTTAGAGCAGCCGAA
GCATCACGTaaagaaaaggagaaaaaagaacAAGAACAGCGACAGAAAGA
ACAgaaagaacaagaagaaggagaagcAGAAGAAGAAACGCTATTGGTGG
ATGGAAAAACCAAATTACCTAACGATACTCGAAGTAATGGTCTACACGCT
ATCAATCGTAATGATGAGAAAGAGCTCACGCTTAGTAAGGAGGATATAAA
TGATAACAAAACAAGCGGTCATCATTTTATCGAGAATAACCATCCAGATA
TTCGACTCAATATTAATGGTGAAGAGGAACACGACCAATTACTCGTTAAA
ACCTTCAAAGGGTCCAAAGAGAATATCAACTTTGAGACCGGGTTATGAAT
AAGTGAGTTCTACTAAAAGTGAaaggttttcaaaaaatgtgtgtaTGCCT
TATATAAGATAAGGCTGCGTACACACGCTGTAAGGTGGTGTATTCACATC
TAGCTCTGATTCTTCAAGAGTGCTGAACCCGAACCGAGAGAAAAATGAAC
TGCGCATTTTAAATTATaacgatttaatttttttaagttacCCTTAAATT
AACTGTATATTATTAAAGGCTTGCTGTCTACAGCTTACAGATGGACAAAT
AAATCCGCGGCGAATGGATATGGACGAATGAATGAATGGCCTGTATTTTT
TTACCTACTACTATTACGTTACGAAAGAACAGTTTCTATAACGACGCCTG
GTCGAAAGAGCtgacaaacaaaaaacaatgaaGTTAATTGACATGTAAAA
TCAACCGTTATAATTTTAAGAAAtacttaatttttcgaaaaagaaatcga
aTTTTATGCTTCACTGCAGGGAAAAATTATGAATCAAGAATTTATTTGAA
ATGAATAACTTATTactaatatttatttttcttactttgcagtgtttttt
ttcttgttacCATTTTTAGTGTAAAAAGTttaatcaaatattttcaaata
gttCCCAAACCACTTGGAAACCATGTTAGAATAATTGACTACGTTCAATG
GTTCAATGCCAGCTGGGATACAAGTACACATTTTTATAAACCGACCATAA
AATTGCTTTTAAATGGAAAACATCCTTTGATTTTGGAAATTCTGGgattt
tttcttatatttaaaTTTATG

Coding sequence (CDS) from alignment at sc0000066:332034..346154+

>TCONS_00006256 ID=TCONS_00006256|Name=TCONS_00006256|organism=Clytia hemisphaerica|type=CDS|length=5049bp|location=Sequence derived from alignment at sc0000066:332034..346154+ (Clytia hemisphaerica)
ATGTATTCAGCTTCGGCGGCTGTTGGCAACTCCTTGAACTGCTCACAAGA
TGACAAAGATGATAAATGGCGAAAATATAGCAGCTCCACCGAAATTGATC
ATCGAAACTTTCGAAAGGAAATGGTTCAGAATGGACCATCTATCACAAAA
CACCATTCAATCACAACAGATCTTAGCGGAGACCAGAGCATACCGGACCG
TGTGGTCGTTAACGTGTCCGGACTGAAATTCGAAACTCTGTCCGAAACAT
TGGAACAGTATCCAGAATCACTCCTTGGCAATGAAGACAAACGAAAAGCT
TATTTTGACGAAGCacgaaatgaatattttttcgaTCGTAATCGACCTGC
GTTTGAcgctattttattttattatcaaTCAGGTGGCAAATTATTAAGAC
CACCTAACGTCCCTATGGATGTATTTGCTGATGAGATTAGATTTTATGAA
CTTGGTGACGAGATTCTTCAACGTGTAGAACGCGAAGAAGGCTATATAGA
AGAAGAAGAACCAATTTTCCCTGAACGGGAATGGCAGAGAAAAATATGGG
AGCTTTTTGAATATCCAGACACTTCAATTGGAGCAAGAATTGTTGCAGTT
ATTTCAGTGTGCATCATCACCATATCTATTGTAACCTTTTGTATTGAGAC
ACTTCCGCAGTTCAGATATGAGAAATTCAATTGTACAAAAATGGGGAATG
GTTCGACAGTTTGTCAAGAGAGAGAAATTCGAGATGATAAAGCTATGCCA
TGGTTTGGTATCGAATCAGCGTGTATTGTTTGGTTTACATTTGAATATAT
CATGAGATTCATTTCTTCACCACAAAAGTTAGTCTTCGCAAGATCTTTCT
TAAATTTGATAGATGTTATTGCAATTATTCCTTATTATATCACGCTACCA
ATGAAAACATCCAATGTATCTTCACTCGGAGTATTGAGGGTCATTCGATT
AGTACGTGTGTTTAGAATTTTCAAGTTATCACGACATTCTCGTGGCTTAC
AGATCTTGGGACATACTTTACGTGCCAGTTTACGTGAATTGGGATTGCTC
ATCTTTTTCTTGCTCATTGGTGTCATCCTCTTCTCTTCGGCCGTTTATTA
TGCTGAAGGTGGCgagaaaaagactttcaaatCCATTCCTGATGCTTTTT
GGTGGGCTGTGGTTACCATGACGACTGTGGGTTATGGAGACATGAAGCCT
GAATCCGCATGGGGAAAGATTGTTGGTAGCCTGTGCGCTATTTCTGGTGT
CTTAACCATTGCTTTGCCCGTTCCTGTCATTGTCTCCAATTTCAATTATT
TCTACCATCGTGAGAACGAGCTTAGAGCAGCCGAAGCATCACGTaaagaa
aaggagaaaaaagaacAAGAACAGCGACAGAAAGAACAgaaagaacaaga
agaaggagaagcAGAAGAAGAAACGCTATTGGTGGATGGAAAAACCAAAT
TACCTAACGATACTCGAAGTAATGGTCTACACGCTATCAATCGTAATGAT
GAGAAAGAGCTCACGCTTAGTAAGGAGGATATAAATGATAACAAAACAAG
CGGTCATCATTTTATCGAGAATAACCATCCAGATATTCGACTCAATATTA
ATGGTGAAGAGGAACACGACCAATTACTCGTTAAAACCTTCAAAGGGTCC
AAAGAGAATATCAACTTTGAGACCGGGTTATGAATGTATTCAGCTTCGGC
GGCTGTTGGCAACTCCTTGAACTGCTCACAAGATGACAAAGATGATAAAT
GGCGAAAATATAGCAGCTCCACCGAAATTGATCATCGAAACTTTCGAAAG
GAAATGGTTCAGAATGGACCATCTATCACAAAACACCATTCAATCACAAC
AGATCTTAGCGGAGACCAGAGCATACCGGACCGTGTGGTCGTTAACGTGT
CCGGACTGAAATTCGAAACTCTGTCCGAAACATTGGAACAGTATCCAGAA
TCACTCCTTGGCAATGAAGACAAACGAAAAGCTTATTTTGACGAAGCacg
aaatgaatattttttcgaTCGTAATCGACCTGCGTTTGAcgctattttat
tttattatcaaTCAGGTGGCAAATTATTAAGACCACCTAACGTCCCTATG
GATGTATTTGCTGATGAGATTAGATTTTATGAACTTGGTGACGAGATTCT
TCAACGTGTAGAACGCGAAGAAGGCTATATAGAAGAAGAAGAACCAATTT
TCCCTGAACGGGAATGGCAGAGAAAAATATGGGAGCTTTTTGAATATCCA
GACACTTCAATTGGAGCAAGAATTGTTGCAGTTATTTCAGTGTGCATCAT
CACCATATCTATTGTAACCTTTTGTATTGAGACACTTCCGCAGTTCAGAT
ATGAGAAATTCAATTGTACAAAAATGGGGAATGGTTCGACAGTTTGTCAA
GAGAGAGAAATTCGAGATGATAAAGCTATGCCATGGTTTGGTATCGAATC
AGCGTGTATTGTTTGGTTTACATTTGAATATATCATGAGATTCATTTCTT
CACCACAAAAGTTAGTCTTCGCAAGATCTTTCTTAAATTTGATAGATGTT
ATTGCAATTATTCCTTATTATATCACGCTACCAATGAAAACATCCAATGT
ATCTTCACTCGGAGTATTGAGGGTCATTCGATTAGTACGTGTGTTTAGAA
TTTTCAAGTTATCACGACATTCTCGTGGCTTACAGATCTTGGGACATACT
TTACGTGCCAGTTTACGTGAATTGGGATTGCTCATCTTTTTCTTGCTCAT
TGGTGTCATCCTCTTCTCTTCGGCCGTTTATTATGCTGAAGGTGGCgaga
aaaagactttcaaatCCATTCCTGATGCTTTTTGGTGGGCTGTGGTTACC
ATGACGACTGTGGGTTATGGAGACATGAAGCCTGAATCCGCATGGGGAAA
GATTGTTGGTAGCCTGTGCGCTATTTCTGGTGTCTTAACCATTGCTTTGC
CCGTTCCTGTCATTGTCTCCAATTTCAATTATTTCTACCATCGTGAGAAC
GAGCTTAGAGCAGCCGAAGCATCACGTaaagaaaaggagaaaaaagaacA
AGAACAGCGACAGAAAGAACAgaaagaacaagaagaaggagaagcAGAAG
AAGAAACGCTATTGGTGGATGGAAAAACCAAATTACCTAACGATACTCGA
AGTAATGGTCTACACGCTATCAATCGTAATGATGAGAAAGAGCTCACGCT
TAGTAAGGAGGATATAAATGATAACAAAACAAGCGGTCATCATTTTATCG
AGAATAACCATCCAGATATTCGACTCAATATTAATGGTGAAGAGGAACAC
GACCAATTACTCGTTAAAACCTTCAAAGGGTCCAAAGAGAATATCAACTT
TGAGACCGGGTTATGAATGTATTCAGCTTCGGCGGCTGTTGGCAACTCCT
TGAACTGCTCACAAGATGACAAAGATGATAAATGGCGAAAATATAGCAGC
TCCACCGAAATTGATCATCGAAACTTTCGAAAGGAAATGGTTCAGAATGG
ACCATCTATCACAAAACACCATTCAATCACAACAGATCTTAGCGGAGACC
AGAGCATACCGGACCGTGTGGTCGTTAACGTGTCCGGACTGAAATTCGAA
ACTCTGTCCGAAACATTGGAACAGTATCCAGAATCACTCCTTGGCAATGA
AGACAAACGAAAAGCTTATTTTGACGAAGCacgaaatgaatattttttcg
aTCGTAATCGACCTGCGTTTGAcgctattttattttattatcaaTCAGGT
GGCAAATTATTAAGACCACCTAACGTCCCTATGGATGTATTTGCTGATGA
GATTAGATTTTATGAACTTGGTGACGAGATTCTTCAACGTGTAGAACGCG
AAGAAGGCTATATAGAAGAAGAAGAACCAATTTTCCCTGAACGGGAATGG
CAGAGAAAAATATGGGAGCTTTTTGAATATCCAGACACTTCAATTGGAGC
AAGAATTGTTGCAGTTATTTCAGTGTGCATCATCACCATATCTATTGTAA
CCTTTTGTATTGAGACACTTCCGCAGTTCAGATATGAGAAATTCAATTGT
ACAAAAATGGGGAATGGTTCGACAGTTTGTCAAGAGAGAGAAATTCGAGA
TGATAAAGCTATGCCATGGTTTGGTATCGAATCAGCGTGTATTGTTTGGT
TTACATTTGAATATATCATGAGATTCATTTCTTCACCACAAAAGTTAGTC
TTCGCAAGATCTTTCTTAAATTTGATAGATGTTATTGCAATTATTCCTTA
TTATATCACGCTACCAATGAAAACATCCAATGTATCTTCACTCGGAGTAT
TGAGGGTCATTCGATTAGTACGTGTGTTTAGAATTTTCAAGTTATCACGA
CATTCTCGTGGCTTACAGATCTTGGGACATACTTTACGTGCCAGTTTACG
TGAATTGGGATTGCTCATCTTTTTCTTGCTCATTGGTGTCATCCTCTTCT
CTTCGGCCGTTTATTATGCTGAAGGTGGCgagaaaaagactttcaaatCC
ATTCCTGATGCTTTTTGGTGGGCTGTGGTTACCATGACGACTGTGGGTTA
TGGAGACATGAAGCCTGAATCCGCATGGGGAAAGATTGTTGGTAGCCTGT
GCGCTATTTCTGGTGTCTTAACCATTGCTTTGCCCGTTCCTGTCATTGTC
TCCAATTTCAATTATTTCTACCATCGTGAGAACGAGCTTAGAGCAGCCGA
AGCATCACGTaaagaaaaggagaaaaaagaacAAGAACAGCGACAGAAAG
AACAgaaagaacaagaagaaggagaagcAGAAGAAGAAACGCTATTGGTG
GATGGAAAAACCAAATTACCTAACGATACTCGAAGTAATGGTCTACACGC
TATCAATCGTAATGATGAGAAAGAGCTCACGCTTAGTAAGGAGGATATAA
ATGATAACAAAACAAGCGGTCATCATTTTATCGAGAATAACCATCCAGAT
ATTCGACTCAATATTAATGGTGAAGAGGAACACGACCAATTACTCGTTAA
AACCTTCAAAGGGTCCAAAGAGAATATCAACTTTGAGACCGGGTTATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003576	XLOC_003576	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00006256-protein	TCONS_00006256-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000066	supercontig	sc0000066:332034..346154 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.0762	2.26654	1.11716	0.988249	4.71953	3.76524	15.7858	18.6301	10.9988	11.5822	11.1452	10.5802	12.1414	12.4371	5.01168	4.83692	10.1367	11.9115	11.1574	12.5326	14.5083	13.1466	7.14948	12.0947	12.9916	11.7375	10.6041	8.42811	0.933992	0.873474

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003972	K_chnl_volt-dep_Kv1
IPR003968	K_chnl_volt-dep_Kv
IPR028325	VG_K_chnl
IPR000210	BTB/POZ_dom
IPR005821	Ion_trans_dom
IPR003131	T1-type_BTB
IPR011333	SKP1/BTB/POZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005249	voltage-gated potassium channel activity
GO:0005515	protein binding
GO:0005216	ion channel activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0008076	voltage-gated potassium channel complex
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006813	potassium ion transport
GO:0055085	transmembrane transport
GO:0006811	ion transport
GO:0051260	protein homooligomerization

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0006813	potassium ion transport
biological_process	GO:0051260	protein homooligomerization
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0008076	voltage-gated potassium channel complex
molecular_function	GO:0005216	ion channel activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005249	voltage-gated potassium channel activity

Blast

[Close]

BLAST of TCONS_00006256 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2)

HSP 1 Score: 371.703 bits (953), Expect = 1.275e-114
Identity = 244/411 (59.37%), Postives = 307/411 (74.70%), Query Frame = 2

Query: 1628 SITKHHSITTDLSGDQSIPDRVVVNVSGLKFETLSETLEQYPESLLGNEDKRKAYFDEARNEYFFDRNRPAFDAILFYYQSGGKLLRPPNVPMDVFADEIRFYELGDEILQRVXXXXXXXXXXXXXXXXXXWQRKIWELFEYPDTSIGARXXXXXXXXXXXXXXXXXXXETLPQFRYEKFNCTKMG-------NGSTVCQEREIRDDKAMPWFGIESACIVWFTFEYIMRFISSPQKLVFARSFLNLIDVIAIIPYYITL----------PMKTSNVSSLGXXXXXXXXXXXXXXKLSRHSRGLQILGHTLRASLREXXXXXXXXXXXXXXXSSAVYYAEGGEKKT-FKSIPDAFWWAVVTMTTVGYGDMKPESAWGKIVGSLCAISGVLTIALPVPVIVSNFNYFYHREN 2806
            ++  H   T D   D    +RVV+N+SGL+FET  +TL Q+PE+LLG+  KR  YFD  RNEYFFDRNRP+FDAIL+YYQSGG+L RP NVP+D+F++EIRFYELG+E ++    +EGYI+EEE   PE E+QR++W LFEYP++S  ARI+A++SV +I ISIV+FC+ETLP FR E  +    G       N +   Q+     D   P+F +E+ CI+WF+FE+++RF + P K  F  + +N+ID++AIIPY+ITL            +     SL +LRVIRLVRVFRIFKLSRHS+GLQILG TL+AS+RELGLLIFFL IGVILFSSAVY+AE  E+++ F SIPDAFWWAVV+MTTVGYGDM P +  GKIVGSLCAI+GVLTIALPVPVIVSNFNYFYHRE 
Sbjct:   14 ALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTD---PFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET 421

The following BLAST results are available for this feature:

BLAST of TCONS_00006256 vs. Swiss-Prot (Human)

BLAST of TCONS_00006256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KCNA2	1.275e-114	59.37	Potassium voltage-gated channel subfamily A member...	[more]

You are here

TCONS_00006256 (transcript) - C. hemisphaerica