TCONS_00006212 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006212
Unique NameTCONS_00006212
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006212 ID=TCONS_00006212|Name=TCONS_00006212|organism=Clytia hemisphaerica|type=transcript|length=143bp
ACTGACTGACACCACAATCACCCAATATTCGATGTTCTTTGTAAAAGCGT
TACTCAAATTGTTAAACAACGACAACGTGacaaaaaaacgttgtttggcA
ACAATGCCCGCTGAATGTAAAATTTAACGAtgacatttccaat
Run BLAST on NCBI

transcript from alignment at sc0000063:759206..759348

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006212 ID=TCONS_00006212|Name=TCONS_00006212|organism=Clytia hemisphaerica|type=transcript|length=143bp|location=Sequence derived from alignment at sc0000063:759206..759348 (Clytia hemisphaerica)
attggaaatgtcaTCGTTAAATTTTACATTCAGCGGGCATTGTTgccaaa
caacgtttttttgtCACGTTGTCGTTGTTTAACAATTTGAGTAACGCTTT
TACAAAGAACATCGAATATTGGGTGATTGTGGTGTCAGTCAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003558XLOC_003558Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006212-exon-sc0000063-1491911889:759206..759348TCONS_00006212-exon-sc0000063-1491911889:759206..759348Clytia hemisphaericaexon
TCONS_00006212-exon-sc0000063-1510915933:759206..759348TCONS_00006212-exon-sc0000063-1510915933:759206..759348Clytia hemisphaericaexon
TCONS_00006212-exon-sc0000063-1575043694:759206..759348TCONS_00006212-exon-sc0000063-1575043694:759206..759348Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:759206..759348 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006212 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top