TCONS_00006127 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006127
Unique NameTCONS_00006127
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006127 ID=TCONS_00006127|Name=TCONS_00006127|organism=Clytia hemisphaerica|type=transcript|length=1577bp
TTAGATTCTAgcaaatcaaaaaacaacacCTATTTGTTgtaaaaatgaca
aataaacCATCTAATGGGCAAATAGCTGCCATTGGAATAGAATTGGTTGT
TTTTGCTGTACTCTCATACTTTGGAGTGAAATGGATCGCAAAAGTGTTGG
ATCCCACCAGCAAACAAAAAGAGGCAGCTCAAAAACAGgcggAAAAGATA
ACCAAATCACTTGGTATTGAGACAGAGgaaacgGTCATCCTTCCTTTACA
AAGAAGAGCATTGTTCCAAACATCAAATCTCCTTTCAGCTCCTAAAGGTT
GTCATTTTATTAATTTGGATGTGTCAAGTTTGACAGATAAATGGTATGGT
GAATCGCAAAAACTCGCCAATGCTGTCTTTTCTCTGGCATTGAAAATTCA
ACCTTGCATCATTTTCATCGACGAAATAGATTCATTTTTGCGATCACGCG
AATCGAATGACCACGAAGTCACTGCAATGATGAAAGCTCAGTTCATGAGC
CAATGGGATGGGTTACTCTCACAGACAAgttgtgacgtcatcataatGGG
CGCCACCAACCGCCCTCACGATATAGATCGCGCCATCTTAAGGAGATTAC
CCTGTCGTTTTCATATTGGTTTACCGGAGCTTGTTCAACGGAAAGCCATA
CTGAAGATCATACTAGCTGAAGAAGATTTATCTGAGGATGTTGATTTCGA
TAACCTAGCTTCCCAAACCAAAGGTTATGCAGGATCAGATCTGAAAGAGT
TTTGCCGATATGCTGCCCTGCATTGCTTGCGAAGACAGGTCATTGATATT
GATTGTGCTACAATGGATGGAGTATCGCATAACAATATGTTTTTATCGCT
GGAACAAAACGATTTCAACTCCGCTGTGGAGAGAATGAAGAAAAATCGTA
TCCTGTTTGAACCGTCTCATCCGTTGGAACAGGCAGCCAATCACGATGTT
GATTGAACAAAGGAGAGAGGGAGGGAACCAATCAGATCTCGCGTTGGTCC
GGCAGgaaccaatcagaattcacgaTAGTTTGGAAGAAACCAACCAGAAT
GCACGATGACAGTTGAAAGGAACAATGTACAGCTCATGTCGATTGAATGT
TATACGATTTAGGGTTTATAGTTCACGTTTTGTTTTTTATGTTGAAACGG
CCTCTCATGGAAAATTGTATCAATGGTCTCAATGGTATCTGCAAATCATA
TATTGTTGAGATGGAATGAACGTATTGTGAGCTCTGGTTTATTTGAGAAG
TGAAATCAAAGTTCGTTCGAGATAAAACATTGCTTTGTTTTGAATGTTGT
AATCAAATTTGATCATTACAAAAGACCACTACTGAAATCGTCTTGTTACT
TTAATgagataaattttcgcggggattagatttcgcggttgagcttatcc
gtgaaattttgagatttggcatggacttaattttgcggatgacaTTATCA
GAAGACAATATTTCATGGTTTTGTGCCTTTTACTGCCAAATtgtgcatgt
tggttgttgaaaaaCGCATTATTAGCGcatctttgatgccagtaaacatt
ttaaaagtagttatttggctttttttt
Run BLAST on NCBI

transcript from alignment at sc0000063:319492..329800+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006127 ID=TCONS_00006127|Name=TCONS_00006127|organism=Clytia hemisphaerica|type=transcript|length=10309bp|location=Sequence derived from alignment at sc0000063:319492..329800+ (Clytia hemisphaerica)
TTAGATTCTAgcaaatcaaaaaacaacacCTATTTGTTgtaaaaatgaca
aataaacCATCTAATGGGCAAATAGCTGCCATTGGAATAGAATTGGTTGT
TTTTGCTGTACTCTCATACTTTGGAGTGAAATGGATCGCAAAAGTGTTGG
ATCCCACCAGCAAACAAAAAGAGGCAGCTCAAAAACAGGTatttaaaagg
ttttgtttttaaataagagtgatatcatttgcttactcatcaagcttgtt
cacattggattgatacAAATGTGGAGCAAAGTTGgacagaaaaaggaaaa
gaaaaatattttttttgcttataatcagcataatataacaatagcataac
actgtcctgatatgaaatatgtgtctgatatgaaacggaaacactaatgt
aataaaacctttaaagcttggtactcactttttgaaaaaggtaGTGTTTA
ACACTAAACGCCGGCGTATAACTTTATACGCGCGCGTCTGAAACCATAAG
ATCTCTAGTGAGTACACTCAATAAACGCCGGCGTTTAATTTATACGCCCG
CGTTTAATTTATACGCCCGCGTTTAATGTTAAACGCCGGCGTttatcaaa
ctttgaaaaaaatatttaaacgcgcatatcaaaaaattttgatatgtgcG
TTTAAAGTTCAAAGGCACCGCAATGTAAACAAGATTAAatctttttaatt
cttttgtaatttttggtttttactttcgatttcgtttCACTTTTCCCCTC
TTTTACTATCTTTTACTATATTTCTCTTTGCTAAAGAGCTCCTAGTGAGT
ACATAGATGATCTGAAAAGTTAAACGCCTGCGTTTATCATTAGACGCGTG
CGACTAAAGTGTTAAACGCCACTTTTTCAACAAGTGAGTACTAAGCTTAA
GTGTTTCCAGAAAAGAATGTATACATCTATCTTGAGTTGAAGCTCACTAT
GTTTAACCTTGTTTGGAACTAGTTTTATTGGTGCAGATTTGGTCTCTTTA
CCGCTTTATGAATACCCCTCCTGTTTTTACTATTCTCCTTACTCCGTTTT
ACCCCCTTTATAACACTTTGTTCTTGCCCTTTTTAATGACATTTGGGAGC
GCTCTGTAGAGAGGGGAGGGGGTCGAACTATGACCCTACTATAGAAtgaa
taaagctttttaatcaattttttttatgattttggtCCCTTAATAAATCA
ATTACACATTtcctaaaaacaaatattttgtctCTTTTCCTGGGCACATT
GTATGATCTTAATATGATAATTTTCAACTTTGTGTGCATGCATTCATAAT
TATAATAATAGACGGTNCATTTGGGAGCGCTCAGTAGAGAGGGGAGGGGG
TCGAACTATGACCCTACTATAGAATGAATAAAgctttttagtcaattttt
ttgatgattttagtCCCTTAATAAATCAATTACACATTtcctaaaaacaa
atatttttgtctcTTTTCCTGGGCACATTGTATGATCTTATATGATAATT
TTCAACTTTGTGTGCATGCAtttataattataataataatcGGCTGTAGA
GGGACAAATAGAAGGCTTACTAAACTAAATAAGATAACTGAGAAATCCAT
TTTCCactctttattttcattttaggcggAAAAGATAACCAAATCACTTG
GTATTGAGACAGAGGTATTAGATAAATCATAGTTTAACTGGgttgatttt
caaaagatttaaaACTCACAAAATCACTCAACATTGCTGACTCATGACAT
TAAATGACCGTGAAAATTCCATTTTTTGTCGTAAATTGCAAATCTTACCG
GGTATTTCAAGCCGAATTTCTGATCTTTTTAAGTAGATTCAATATATTAA
GAATGAGCAATTCCACGCGATTTTGTGAGTTTAAAAAATCATAATACAGT
AAAAGCGATGCTACTTTTACAAAATATCTTGAACTGGAGGCCAAGGACAC
TCAAAATTTGCATAAAAGTTAGTATTATTATGTTGAAAGGACAAAATACA
CTgaattttgtaaacatagaCTTTTCACTGTTTTATTCATAAATATTTAC
GGTTTCTTATAATGCCAATGAGGTTCCTTCCTTGCCTGTAAAATAAATAG
AACTACAGCAATATTGCATTATTACTTAAAACAGGGAAAAAGATCTTTGA
GACCGCtttgtttttggtgtttttcaggtAAATCCtcgtaagtaagtctg
cgaccgcattcggaggcgacccgaaggctcctctttcgatagctatctac
ccaaaggtaggggagggcgctactctttctccctggatttctccacttac
ccttgatccttctcttaattgctgagaatcaagcagagaggcatcaagtt
tGAGAATCTTTGGAATGATCcggctggggattgaacccacaatcttgcgc
accgtagccggatggtctaccactgcactacggtcgctattGTTCCATGT
TGATCTTGTattaaaagcaattttttttccCATAGCTAACAGAGTATGAA
ACAACGATAGCTGCACTTTTGATTGACCCATTAAATTTACCAAATACGTG
GCATGACATTGGTGGTTTGGATTCTGTCATCTCTGAAATGAGGGTACACA
CTGTTTTATCGTAATagaccttatcagagtttttgttttttctaaaaaag
cgatgcattgtgggattgtttcgagtgtatattacaatagaaatctctta
ggaattcctcgagggaattctattgtaatacactctaaacaatcccacaa
tgcatcgctttttaaaaaaaatcaaaaactccgataaggtctttaacctt
attacacgaataacgcaagtattcaacggccttgaaatttgcacaatctc
aaatttttctgctttttcatgGAACAGTGGCCAGCagtggctggttttaa
ttaaggggggtttttcaattcgtgttaataaaatgactaataatattcgt
gtaataagatGCTACCAATATTTTTGGACCAACCAtcgatttttttatca
ttttcctgGTTGTTATAGGCTCTATTAttaaatcgtttgttttattttgc
ttttttagCTTTCGaccaaaattgaaacttttgtgTTATAATTGTATATT
CCAATCCAGGAACCTCCCCATGGCTTTTAGAATCTGGCTGATTACTAGCT
ATTTGTCTAAATTTGCATAATAATTGAGTAAGAATTTTGAGTATTTTGGG
AAAACCCTCAgcgttttcaaaatatggacCCCTCTCAATGTGTGTTTTAC
AAGCTATCTGTGGAattaccactgacctttatatactcTGAAAAAAAGCT
ATATACCCGCAATCTTTGATCGTAATTTTTAGAAAGGTACTCTAAGGATA
GCACTACTCGATATGGCCCAATTtgtaaatcaaagaaattttccgTTTAA
AAATTAGTGCTACAATTAGGGTACCCACGATAAAAAATATTGCTCGGCTT
GGATTGAGGACTGTGTCCTGGGTATATAAAGCTCAGTGGGAATTTTACGG
aaagttttctctttttttttcaggaaacgGTCATCCTTCCTTTACAAAGA
AGAGCATTGTTCCAAACATCAAATCTCCTTTCAGCTCCTAAAGGTTTCTT
GATTTTCATATCGAATCATTATAGCAATCGTCTTGCCAGAGTTGAATAAA
CCATCATCAGAGTAGGGCTGTCGACCATGtattagctctagtttagacag
cccacttttcgccctgcctattataactgtgaattaaagtgggcataaag
tgggctatctaaagtcattgcattgccctcttttgacgtcaatgcactga
cttctttcaatctttcctAAGCAAAGATTTTAGCTGCTAACTTTTTGCCT
Ctactaacaattagaataggtagggaagaaagtcggccgtctaaactaga
gctaagctGCTTTTTTACCGTTAACTACTGTAAGAGTTTTCCTATTTAAG
CCGGTAAGTAATGACTTAACTCTAGTTTAAACGGTCacctttctgccctg
cctattctaattgttagagtaggcagaaagagggcacaaagttggcagtt
aaaatctttgcttttagaaaagattgaaaaaagtcattgcattgagaGGG
AAATgtattgactttagacagcaaACTATCTGCCGACTTTAattaacaat
tagaataggcagggcgaaaagtgagccgtctaaactagagcttactttgg
atatttgaaaaaaaaagttgtattTATTATTGTAGAGCTTTTACCGTGCT
ATCTTTCTTAAGGCGTTTTATTATTCGGACCACCTGGCTGTGGAAAGACA
ATGATTGCACGGGCAACCGCAAAAGAGGCTGGTAAGTTGACCGGAATTGA
ACTCACTGAATATTaaagtagagtctctttaacttcTCTAACTCAAATGT
AGGTGTTGTAGTTGTGAATGTACTCCTAGGAGAGTAGGTGTTCCGCTCCA
CCTGAGACCCGGCTACCCGCTAAAAAAACTCTCACTCCTACCTCCGCTGA
TATCTACTTACCTACTACAATAGCAAATTGTCACTTTTCATTCCACTTCA
TCGTTTCAGGTTGTCATTTTATTAATTTGGATGTGTCAAGTTTGACAGAT
AAATGGTATGGTGAATCGCAAAAACTCGCCAATGCTGTCTTTTCTCTGGT
ATGTTTCGCTACTGCGTTGTGTTATACTCTAATTATCCAACATTTTATTT
CCATCTTGTTCAAATACACGCTACatgaaattatgtttttttttcaacta
ccgtcaagacattttttaaattcaaaatctgACATCACAGCAAATAAAGA
ATGAACTTCTTCTTGGGCTTAAATTGTTCTCAGTTATTGTGCTCTTAGTG
TAAAAGCTGGATAGCAGCAGTTGATCTTTGTATACACGCGTTTAATTGAG
CATTTTATATATAAGAATACTTTGTCAGGCAAAATATCAAGagtaaatta
aaaataacattATTACCATTAAAAGGCTTTGGAAAGTATGTATAGAAAGA
CTTGCtcaatagtgaaaataagaaaattatgaaaacatttttaggcttaa
ctctgaaagttaagaacatccaaaggcttgaAAGATTtaggacattctta
taaaaaaaggtgtatctCGAGAGAACTGATCAGCACTAAATTAGAAACGT
TGAATGTCGATGGTTTTTGTCAAATTAGTATTGCAGATAACAGAAAttca
ttgttttgttttacCTCGTAGGCATTGAAAATTCAACCTTGCATCATTTT
CATCGACGAAATAGGTATGGATCTTCTTGTTATTTCTATGAGTTTCCCCC
TCAATCTTCCTAGAACTTTTTCTGAATCCTTTTCactcatcattattcat
gatatgcactattgtaatgtcttccaaggacccaacagctgattggctga
aagtggcgtattgactgattttttgtcaataacaaccaatcagctgttgg
gtccgtgatgtaatgtcagaagacattgcagtagTGCATAACATGAATTC
AACCCTATTTTGCAATTGCTATATATAAATCAACAAAGCTTATGTCTGAA
TTATCCCGAAATTTATTGCAAAAGGAACTCGTTTAAAAAGTCCTACTCAA
AGCTTATGTATAGCTTTCGAAATGTATATGATGTTATTGCCTGAaaataa
gtttgaatttttgaaaatctcttaCCCCTTAGGACCTTTTCGGGGAAAgg
gaattttcccaaaaatgagATTCCACGAGTTTCCTCTTGAAAAGGTCTAA
TTAAAGCTTcggtattattttttttctactaACGCATCCGACGTTGTAAA
GTTTTATTAAAGACTTGTAAATAGACATAttgccttatccgttgggccac
aggaccagCCTTTTCAACATCTAGCTCTCTTATAACATATCTTGGTTACT
TATCCAATACTTGTTTTATTGAATCTCTGTGATTGTATTTCTTCCTTACC
TGCCTTTCAGATTCATTTTTGCGATCACGCGAATCGAATGACCACGAAGT
CACTGCAATGATGAAAGCTCAGTTCATGAGCCAATGGGATGGTATGTAGT
TACTCTCTCTATGAatcgttgaaaagattttttcaagaaaaacattaacc
ttatatattgtccggggggtagcgaaaaatcatcaaaatttgccttgttc
ggggggtaaatttgctctgtccgggggtaatttggatTGTCCGGGgagcc
aaaagtcactttgtcactgaaaattgttatatccttcaccccccatatta
aatttttttctggaaaagcccattcggAGAATTCACGAACCGCGTTCAAc
gaaagaacaaactatataagtaTATACTGTGTAGACACCAACAATTTAAA
ACATCATTTAAACGAAGACTTTGCAAAACAAAACTGATCGAAACGCTTTA
CTATTTTCGTCAAACGGAACAACTCCGTTTATTTCGTTGCTCTTAAACGT
TCCAAAACCAACACGAACACTTGTTATCCTTAACTAGAACCGATGCTAAA
CTTTAATGTCTACACATGGTCttagaaaattaagaatttataGCTCGTTT
AAATGAAcatgaaacttaaaaaaactaGGCTTAAGATTTCTCTGAGAATA
TGAAGAATTGGGGTCTAAAAgtgatattttctttcttttataataattca
tatattattcaaaaaatttgaatatggggggtggatataacaattttcag
tgatttaccccctggacaaagtgacttttgccccccggacaagcatcagt
tgaccccccggacaacccaaattacccctggacagagcaaatttacccct
cGGACAAGgcaagttttgaggattttttgctgcccctggacaatatatcc
tccacccccatgtacggacattttctggaagagcccattacacTTCCTTG
TAAAAGATTTAACCAAAATGACTGACACTCGATCTTTCATTTGCTACGGG
GTGTTTTTATTTCAGGGTTACTCTCACAGACAAgttgtgacgtcatcata
atGGGCGCCACCAACCGCCCTCACGATATAGATCGCGCCATCTTAAGGAG
ATTACCCTGTCGTTTTCATATTGGTTTACCGGTAAgatgaatgttttgaa
aaagaattgtttccaaacaaatttaataaaagactgttaatctaacgttt
ccagaccatcgaaaaagaacgacaaataactgttaaaaagtgacaaaaag
aACTGACAAAacctaaccctaactatcaaagaacgacatatttcgccatc
cacaaccccgaatAAAATTAACTGTACCACACCCacagattcattcctct
ttgtttatcacgggaattaactacatgtggtttaaaagaatgcaaaatta
cgcatgcgtataagtctctatttgggtgagctggaatcattagatgaact
aactcATAATATTGCATGACTcattgacctttatataccttGGATATAGA
TCTGGccaaacaaaatctttgatcgaagttttttttaaagtggtaccagc
cggcacacaacgttgtttcaacgtttatctaacgttcacaacgtccatat
aacgtNcgccatccacaaccccgaatAAAATTAACTGTACCACACCCaca
gattcattcctctttgtttatcacgggaattaactacatgtggtttaaaa
gaatgcaaaattacgcatgcgtataagtctctatttgggtgagctggaat
cattagatgaactaactcATAATATTGCATGACTcattgacctttatata
ccttGGATATAGATCTGGccaaacaaaatctttgatcgaagtttttttta
aagtggtaccagccggcacacaacgttgtttcaacgtttatctaacgttc
acaacgtccatataacgttagattaacgtttaaacaacgtagtgtgccag
ctggggtaccttcatggtagcactactcaatatcggtgaacaaattttta
aatgaaagaTGTTATCGAATTACAAATTGACTCACATCGAGAAGTGCTAC
CATTCGGGTaccatttttccaaaaattccgATCATAGATGGCGGATAGAT
ATAGCTTGGTTCAGGGTATATCAAAGTCAGTGAGTTTGGCGGCTGAAGTT
TTTTCGTATCGCAAACTCTTGTTGAAAAGGCAAGCATGtggctcaaattt
taatttGCTGTTTGAAAGTAAATTCCTATCTTTTTTTACCCTAAATATCC
TGcaactgccaaattaaattcccgccaaatttatttttttctccgccatc
cgccaaattaaattccgtctgaaaaaactttttcggccatctgcCAAact
aaattcctgccaaaatttctttctataTTTCATTTGAACTATTATCCTTC
AATTTTTCCAGGAGCTTGTTCAACGGAAAGCCATACTGAAGATCATACTA
GCTGAAGAAGATGTAAGAAAAATTTCATTGCGCCAATATTGTCAACCTTT
TTTATTGAGGGCTCTGacctagcctagaaatctaagccagattgattcag
tcacttagtAAAATCtaatggtaagttgtgactgaatatcagtttttcaa
ggcaaacttaaaattccgtacatcataaaaatcatcAAAGCACCGATAAC
GCTATATTGCCTTCAGCCGTACCTTGGCcttgtaaaaactggcttggtta
accaggctaGCTCTGACCATAGTTATTTCTTACATTTGGCAAGTACAAAA
TTTAACATACAGctgttgactctcgctaattggAACTCCAAACTCTTatc
tgttcgaattacagagagattcgaattatagtaTATTAAGAGGGTTTTCC
TCTGGCAGTGACTGGAAatgatttcgagttatagaaattcgaataaaaga
agttcgaattagcgaaagtCCACTGTATTGcgatcttaaaattttaaatc
ctcTACGCTTCGCATTTTTAAAATTAGCTGAAACGAAAATTATTTTCGTT
GTACCGTAAGTGTCGTTCATTTTTTGTCATGATTTTGTTTACAGTATTAC
AATCCCAATAACGACCCATCAACATAATAATTGTTTCATTTTCTAGTTAT
CTGAGGATGTTGATTTCGATAACCTAGCTTCCCAAACCAAAGGTTATGCA
GGATCAGATCTGAAAGAGTTTTGCCGATATGCTGCCCTGCATTGCTTGCG
AAGACAGGTCATTGATATTGATTGTGCTACAATGGATGGGtatgtgttaa
aaattcatgatatgcaccactggagagtcttccgagcttttaaaattttc
cacccaatagaaaaagtgacgtattgggtggaacaaaaacagaaaaattg
cataatttcgtgaagtcattgtagtggtgcatatcatgaattatttcCGA
CGTAAGTCAGAAGATGATTATGAATTCCAATTTTCCAAATTGTGCTTTCT
GATTTGGCAAATACTTCTCTGAGCGGGGCAAAAAAGTGGACAATTCAAGA
TGGTTGCCAAAAATGTGACAAAAttggaaagtttttttaaaaataacaag
caaatttgtaaataaatttttcacatcaaaaatGTATTTCATTTTTCTAC
AGAGTATCGCATAACAATATGTTTTTATCGCTGGAACAAAACGATTTCAA
CTCCGCTGTGGAGAGAATGAAGAAAAATCGTATCCTGTTTGAACCGTCTC
ATCCGTTGGAACAGGCAGCCAATCACGATGTTGATTGAACAAAGGAGAGA
GGGAGGGAACCAATCAGATCTCGCGTTGGTCCGGCAGgaaccaatcagaa
ttcacgaTAGTTTGGAAGAAACCAACCAGAATGCACGATGACAGTTGAAA
GGAACAATGTACAGCTCATGTCGATTGAATGTTATACGATTTAGGGTTTA
TAGTTCACGTTTTGTTTTTTATGTTGAAACGGCCTCTCATGGAAAATTGT
ATCAATGGTCTCAATGGTATCTGCAAATCATATATTGTTGAGATGGAATG
AACGTATTGTGAGCTCTGGTTTATTTGAGAAGTGAAATCAAAGTTCGTTC
GAGATAAAACATTGCTTTGTTTTGAATGTTGTAATCAAATTTGATCATTA
CAAAAGACCACTACTGAAATCGTCTTGTTACTTTAATgagataaattttc
gcggggattagatttcgcggttgagcttatccgtgaaattttgagatttg
gcatggacttaattttgcggatgacaTTATCAGAAGACAATATTTCATGG
TTTTGTGCCTTTTACTGCCAAATtgtgcatgttggttgttgaaaaaCGCA
TTATTAGCGcatctttgatgccagtaaacattttaaaagtagttatttgg
ctttttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003498XLOC_003498Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006127-exon-sc0000063-1491911889:319492..319679TCONS_00006127-exon-sc0000063-1491911889:319492..319679Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:319492..319679TCONS_00006127-exon-sc0000063-1510915933:319492..319679Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:319492..319679TCONS_00006127-exon-sc0000063-1575043694:319492..319679Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:321117..321155TCONS_00006127-exon-sc0000063-1491911889:321117..321155Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:321117..321155TCONS_00006127-exon-sc0000063-1510915933:321117..321155Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:321117..321155TCONS_00006127-exon-sc0000063-1575043694:321117..321155Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:323015..323084TCONS_00006127-exon-sc0000063-1491911889:323015..323084Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:323015..323084TCONS_00006127-exon-sc0000063-1510915933:323015..323084Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:323015..323084TCONS_00006127-exon-sc0000063-1575043694:323015..323084Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:324051..324139TCONS_00006127-exon-sc0000063-1491911889:324051..324139Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:324051..324139TCONS_00006127-exon-sc0000063-1510915933:324051..324139Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:324051..324139TCONS_00006127-exon-sc0000063-1575043694:324051..324139Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:324713..324755TCONS_00006127-exon-sc0000063-1491911889:324713..324755Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:324713..324755TCONS_00006127-exon-sc0000063-1510915933:324713..324755Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:324713..324755TCONS_00006127-exon-sc0000063-1575043694:324713..324755Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:325452..325532TCONS_00006127-exon-sc0000063-1491911889:325452..325532Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:325452..325532TCONS_00006127-exon-sc0000063-1510915933:325452..325532Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:325452..325532TCONS_00006127-exon-sc0000063-1575043694:325452..325532Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:326457..326572TCONS_00006127-exon-sc0000063-1491911889:326457..326572Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:326457..326572TCONS_00006127-exon-sc0000063-1510915933:326457..326572Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:326457..326572TCONS_00006127-exon-sc0000063-1575043694:326457..326572Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:327853..327903TCONS_00006127-exon-sc0000063-1491911889:327853..327903Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:327853..327903TCONS_00006127-exon-sc0000063-1510915933:327853..327903Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:327853..327903TCONS_00006127-exon-sc0000063-1575043694:327853..327903Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:328538..328680TCONS_00006127-exon-sc0000063-1491911889:328538..328680Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:328538..328680TCONS_00006127-exon-sc0000063-1510915933:328538..328680Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:328538..328680TCONS_00006127-exon-sc0000063-1575043694:328538..328680Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1491911889:329044..329800TCONS_00006127-exon-sc0000063-1491911889:329044..329800Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1510915933:329044..329800TCONS_00006127-exon-sc0000063-1510915933:329044..329800Clytia hemisphaericaexon
TCONS_00006127-exon-sc0000063-1575043694:329044..329800TCONS_00006127-exon-sc0000063-1575043694:329044..329800Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:319492..329800 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.234364	1.09622	0	0.555564	1.40323	0.344158	1.76193	1.13247	1.49815	0.929114	1.09441	0.22391	0.863871	1.61083	0.640845	1.01635	0.908843	0.852245	0	0.122054	1.12813	1.23763	1.20005	1.75034	1.78783	3.5069	0.088637	0.233018	1.05992	0.712517
Blast
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BLAST of TCONS_00006127 vs. Swiss-Prot (Human)
Match: ATAD1 (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.363e-86
Identity = 154/340 (45.29%), Postives = 203/340 (59.71%), Query Frame = 3 
Query:   60 SNGQIAAIGIELVVFAVLSYFGVKWIAKVLDPTSXXXXXXXXXXXXITKSLGIET-------------------------------------EETVILPLQRRALFQTSNLLSAPKG-----------------------CHFINLDVSSLTDKWYGESQKLANAVFSLALKIQPCIIFIDEIDSFLRSRESNDHEVTAMMKAQFMSQWDGLLSQTSCDVIIMGATNRPHDIDRAILRRLPCRFHIGLPELVQRKAILKIILAEEDLSEDVDFDNLASQTKGYAGSDLKEFCRYAALHCLRRQVIDIDCATMDGVSHNNMFLSLEQNDFNSAVERMKKNR 899
            S  ++  +   L +F  ++YF +KW+   +DPT KQK  AQKQAEK+ K +G++                                      ++TVILP++++ LF+ S LL  PKG                       C FINL  S+LTDKWYGESQKLA AVFSLA+K+QP IIFIDEIDSFLR+R S+DHE TAMMKAQFMS WDGL +  SC VI+MGATNRP D+D AI+RR+P RFHI  P L QR+AILK+IL  E++   VD   +A +T G++GSDLKE CR AAL C+R  V     +T +     +    ++Q D + A+E+MKK++
Sbjct:   12 SRNEVVGLIFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYV----NSTSEESHDEDEIRPVQQQDLHRAIEKMKKSK 347
The following BLAST results are available for this feature:
BLAST of TCONS_00006127 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATAD11.363e-8645.29ATPase family AAA domain-containing protein 1 OS=H... [more]
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