TCONS_00006119 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00006119
Unique Name	TCONS_00006119
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2528

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000063:39552..43616+
coding sequence from alignment at sc0000063:39552..43616+

transcript sequence

>TCONS_00006119 ID=TCONS_00006119|Name=TCONS_00006119|organism=Clytia hemisphaerica|type=transcript|length=2528bp
TTCGGAGAGTGATGTTATGTGAAGTTATTGAAGAAATGTGTTATCAGAGT
TATTGAGTATATCAGATATTATTTATGAATATGGATGAAAAAGAACATTT
ggagaatttgaaaaacttaTGTCGTCTTTGTCGGATGAAGGCAGTATCTA
TAAAAGGCTACAAGGAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATT
CAATCTTTGTTTGGGTACGACTTGAAAGATGACAAAGATGGAGTTCACCC
AAAGAAACTTTGCAGCTCTTGTGTGAGAAAGCTCCGAGACATTAATGTTA
CAACCCCCATGCACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATAAA
AGCAAGGAAGACTGTCCATTATGCTCAAAAACAATGACTGTGTTAAACTT
TAAAGTAACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAG
CAAAAGAATTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCG
TGTACAATGTTACGGCCCGTGAAATATGATAGAAAACCTTCTGACGACAC
ACAGGCATCACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTA
CTATTGACATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTC
GTTTATGAGAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTC
ATCTATAGATGATGCTAAACAACTCTTTGGTCACATTTTAAATGCCAAAG
TATGTGAAGGGAATGTTGACACTGATCTCCCGAAGTTGACCACCAAAAGA
AAGGAGAATATGAATGAAAGTAAAACATCAACTCTTCTAGAGACTCCAGA
GCTGAAGCAATTCAATAAGGTCCGTACCACAATTCGCAATCAGAACTGCT
CCCTCTTAACCAAAAACGAAAAGCGATGCAACGAATGCCAGAAGAGTCGG
CATGATCTTCAGAAGATGGAAAGACGACAATCGATCGAAGCCAAATCAAA
AAAGCCACATGCAGCAATGACAAAAGCTGAACTAACTGATAAACTAACCA
AAGAGTTGAAGCGGAAGCAGAAGaaacttgaaaagaaaattgaaaaactt
gttaaaaagGAAGGTGTTGTGCTTCACGAAGAGGACAATGAGCCTCTTGT
ACGGGCTGTTGTCAAAAACGAGGAATGTCCTTTTGATAAGGGGTCTGCAA
TGGCTTTGCTATGGCAGCAGCAGAAAACAGCATCCCACTTCAAAAAACCC
ACATCAATGAGGTGGCACCCTGTAATCATCCGATGGGCTCTGAGCATTTA
TTTACGAAGTTCAGGTACCTACGAACAAATACGTCAAAGTGGTTTCCTCA
CGCTACCACACAAATCCACCTTACAACAATACACTGGTTTCACTGACATC
ATGACATCATTCAATCCAGATATTCTCAAAAAGTATGCGGATGAGATGAA
ACTCTCTAAGTTACCAGAATTTATGAGATGTTGCTCGTTGATGTTCGACg
agatgaaaataaaatcagGACTGGTCTTCAGCAAGGCCAGCGGAAAGATC
ATTGGCTTCACTGAAATTGGTGACCTCAATGACGAGATTTCTTCTCTTGA
AAGAAGTTTAAGCAAGAAAGAGAAATCTCGAACAATGGCATCACATGGTC
TCGTATTAATGCTACGAGGCTTTTTCAAGCACTACAATCTTCCGATTGCT
TATTTCGCCACAAAGTCTGCATCAAGTGAACAACTTTACTCTGTCATATG
GGAAGGAGTCCGTGTTGCTGAAGCAGTTGGCTTTAATGTCCATGCTCTCG
TTTGTGATGGTGCTTCTTCTAATAGAAGCTTCTTTGAGATGCATCGAATG
GAAAACGGTGAAAATGTCTCAGTCGATGGTGTTGTCTACTGGTCATTTAA
CCCTTGTCATCCTGTCCGTAAAGTTTATTTCATCAGTGACCCACCACATT
TGATGAAAACACTCCGAAATAATCTTGAAAACTCTGGTGGAAATAAAGCA
ACACGTACCCTTATGaaaaatggtCAGCATCTATCTTGGAACCAAATCCG
GATTCTCTATGAAAAAGACTTGAATATGAATGCTGCTCACCCTGGATTGA
GGAAACTTCACAAACTCACGAATGATCATGTTAATTTAGGACCGAGAACT
AGAATGCGTGTAAATTTAGCGGTCCAGgttCTCAGTAAGTCTGTCGTTGA
TGCTCTTATCAAGCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTCA
TAAAGTACTGTGACAAGTTTTTTGACATCATGAACATACAAAATAAGACT
GCTTggttaaagaagaaaaaaccaaATTTGAAACCTTTCGAGAAACCGAA
GCCAGTGGAACAGCTTAAACCCGGTGAAGAGccagaaaaaagattttggt
GGCTTGAACACAAATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGACG
GGTGCTTTGAATATGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCTT
CCAAACAATACAAGGATTGCGTATCACA

Run BLAST on NCBI

protein sequence of TCONS_00006119-protein

>TCONS_00006119-protein ID=TCONS_00006119-protein|Name=TCONS_00006119-protein|organism=Clytia hemisphaerica|type=polypeptide|length=818bp
MNMDEKEHLENLKNLCRLCRMKAVSIKGYKEVKLASSFSGQIQSLFGYDL
KDDKDGVHPKKLCSSCVRKLRDINVTTPMHEKQEIAEFSVHKSKEDCPLC
SKTMTVLNFKVTPLKCLTVASIIKIAKELGLTELETRSTATSCTMLRPVK
YDRKPSDDTQASQEENPVNPFYVDITIDIKADPAGGFLFQTFVYEKTKSF
GDGLPTKLSSIDDAKQLFGHILNAKVCEGNVDTDLPKLTTKRKENMNESK
TSTLLETPELKQFNKVRTTIRNQNCSLLTKNEKRCNECQKSRHDLQKMER
RQSIEAKSKKPHAAMTKAELTDKLTKELKRKQKKLEKKIEKLVKKEGVVL
HEEDNEPLVRAVVKNEECPFDKGSAMALLWQQQKTASHFKKPTSMRWHPV
IIRWALSIYLRSSGTYEQIRQSGFLTLPHKSTLQQYTGFTDIMTSFNPDI
LKKYADEMKLSKLPEFMRCCSLMFDEMKIKSGLVFSKASGKIIGFTEIGD
LNDEISSLERSLSKKEKSRTMASHGLVLMLRGFFKHYNLPIAYFATKSAS
SEQLYSVIWEGVRVAEAVGFNVHALVCDGASSNRSFFEMHRMENGENVSV
DGVVYWSFNPCHPVRKVYFISDPPHLMKTLRNNLENSGGNKATRTLMKNG
QHLSWNQIRILYEKDLNMNAAHPGLRKLHKLTNDHVNLGPRTRMRVNLAV
QVLSKSVVDALIKQGYESTVELRKFIKYCDKFFDIMNIQNKTAWLKKKKP
NLKPFEKPKPVEQLKPGEEPEKRFWWLEHKFLKYFSDWQSETGALNMPPA
QRAKYSISFQTIQGLRIT

Run BLAST on NCBI

transcript from alignment at sc0000063:39552..43616+

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00006119 ID=TCONS_00006119|Name=TCONS_00006119|organism=Clytia hemisphaerica|type=transcript|length=4065bp|location=Sequence derived from alignment at sc0000063:39552..43616+ (Clytia hemisphaerica)
TTCGGAGAGTGATGTTATGTGAAGTTATTGAAGAAATGTGTTATCAGAGT
TATTGAGTATATCAGATATTATTTATGAATATGGATGAAAAAGAACATTT
ggagaatttgaaaaacttaTGTCGTCTTTGTCGGATGAAGGCAGTATCTA
TAAAAGGCTACAAGGAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATT
CAATCTTTGTTTGGGTACGACTTGAAAGATGACAAAGATGGAGTTCACCC
AAAGAAACTTTGCAGCTCTTGTGTGAGAAAGCTCCGAGACATTAATGTTA
CAACCCCCATGCACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATAAA
AGCAAGGAAGACTGTCCATTATGCTCAAAAACAATGACTGTGTTAAACTT
TAAAGTAACACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAG
CAAAAGAATTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCG
TGTACAATGTTACGGCCCGTGAAATATGATAGAAAACCTTCTGACGACAC
ACAGGCATCACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTA
CTATTGACATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTC
GTTTATGAGAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTC
ATCTATAGATGATGCTAAACAACTCTTTGGTCACATTTTAAATGCCAAAG
TATGTGAAGGGAATGTTGACACTGATCTCCCGAAGTTGACCACCAAAAGA
AAGGAGAATATGAATGAAAGTAAAACATCAACTCTTCTAGAGACTCCAGA
GCTGAAGCAATTCAATAAGGTCCGTACCACAATTCGCAATCAGAACTGCT
CCCTCTTAACCAAAAACGAAAAGCGATGCAACGAATGCCAGAAGAGTCGG
CATGATCTTCAGAAGATGGAAAGACGACAATCGATCGAAGCCAAATCAAA
AAAGCCACATGCAGCAATGACAAAAGCTGAACTAACTGATAAACTAACCA
AAGAGTTGAAGCGGAAGCAGAAGaaacttgaaaagaaaattgaaaaactt
gttaaaaagGAAGGTGTTGTGCTTCACGAAGAGGACAATGAGCCTCTTGT
ACGGGCTGTTGTCAAAAACGAGGAATGTCCTTTTGATAAGGGGTCTGCAA
TGGCTTTGCTATGGCAGCAGCAGAAAACAGCATCCCACTTCAAAAAACCC
ACATCAATGAGGTGGCACCCTGTAATCATCCGATGGGCTCTGAGCATTTA
TTTACGAAGTTCAGGTAACTATGTCTATTCATGTCTACAACTGTTAGTTA
CTAAATGAAAATCTGGTCAAAGCTATCATGACCTTTTTTATTCCAGTGAA
AATgatgtattttcttttttttgttggtAATAACTGCTTATGATTCAATC
TACtacttttatcatttaattATCAACCTTTATTTACATTCAAAATTATA
CTACAAAGAATTTTATGCAGAGTTTTTGGTTACAATTATTGGAGGAAATA
ACATCAATATATAATAAGTGATTACTTTTATCCTTCTGTGTCTGCTTGAG
CCTTCTGGTTATCATGTTTGATTTTAGATATAAATAGAATATAGTTTTAT
CGAACGATAAGCTCaaaagataaatttttcaaaccaaTTTTGCTAATTTC
ATGGAAATCAGTGTGAATATTAAAGTCAGTttgttgtaaaaaaagaaatg
tataaaaagaaaaaaaatatattgattaaATGAACAAAAGGACTGAGTCG
TCAGAGAGGTATAaccataattttttttactgttgAAAACATGTTTTACA
TAGGAAAATGTCTTTCATTACTTTCAGGTACCTACGAACAAATACGTCAA
AGTGGTTTCCTCACGCTACCACACAAATCCACCTTACAACAATACACTGG
TTTCACTGACATCATGACATCATTCAATCCAGATATTCTCAAAAAGTATG
CGGATGAGATGAAACTCTCTAAGTTACCAGAATTTATGAGATGTTGCTCG
TTGATGTTCGACgagatgaaaataaaatcagGACTGGTCTTCAGCAAGGC
CAGCGGAAAGATCATTGGCTTCACTGAAATTGGTGACCTCAATGACGAGA
TTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAGAGAAATCTCGAACAATG
GCATCACATGGTCTCGTATTAATGCTACGAGGCTTTTTCAAGCACTACAA
TCTTCCGATTGCTTATTTCGCCACAAAGTCTGCATCAAGTGAACAACTTT
ACTCTGTCATATGGGAAGGAGTCCGTGTTGCTGAAGCAGTTGGCTTTAAT
GTCCATGCTCTCGTTTGTGATGGTGCTTCTTCTAATAGAAGCTTCTTTGA
GATGCATCGAATGGAAAACGGTGAAAATGTCTCAGTCGATGGTGTTGTCT
ACTGGTCATTTAACCCTTGTCATCCTGTCCGTAAAGTTTATTTCATCAGT
GACCCACCACATTTGATGAAAACACTCCGAAATAATCTTGAAAACTCTGG
TGGAAATAAAGCAACACGTACCCTTATGGTAAGTCTAAGGCCTCCACACC
AacatgatgaatttttttgggGGAAAACATGGAAATTCAATGATGGGTTG
ATGTTGATTTTATAATCTGGGTCGAGCCTTGGATTGTTTCACAGTTATTC
TGGTTTCCAGCAAATAAGTCCACATATTTCTTTAATATtctaaaattctt
ttttcagaaaaatggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCT
ATGAAAAAGACTTGAATATGAATGCTGCTCACCCTGGATTGAGGAAACTT
CACAAACTCACGAATGATCATGTTAATTTAGGACCGAGAACTAGAATGCG
TGTAAATTTAGCGGTCCAGGtaagtaatttttcaattttttcaaatcttt
tttatgtAATTCATATATAATTTTTGCTACTTCTAAAGCATATTATAATC
AATGTTTTGCACAATTTTTACGTCTGAATAATTTTTGCTAAGGTTTTTTC
TATATTCAGACTTTCAGGTTCCTAGTATGGCTGCTttattaaaaagttaa
gaaagttcaaaaaacacgttttcgtttttttcaacATTGCTTACTTTTTT
CCTTTGGCCAAACTGAACCAAATTActgtagtttgttcttttacTGGCCA
AGCcactaaaatttttattttgtaattctttttggggtaaattttttcta
tttgtttttttacttttaggttCTCAGTAAGTCTGTCGTTGATGCTCTTA
TCAAGCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTAC
TGTGACAAGTTTTTTGACATCATGAACATACAAAATAAGACTGCTTggtt
aaagaagaaaaaaccaaATTTGAAACCTTTCGAGAAACCGAAGCCAGTGG
AACAGCTTAAACCCGGTGAAGAGccagaaaaaagattttgggtaAGTGTA
TTGACTCACTTCTTGACATACCAGCTTTTAAGGCATCGATGACTATCTCA
TTTCCAAAATGAGTGTATTGGTGTGTGAAACAATAAGCGACATCGTTTGT
GTTTGGATTTCCCTTATCAAATACTCtttaaaactcaatttgaaTACTCC
TGGTCTGATGTCTACCTGGTGGATTCTTAGGGTAgggttttttggaaagt
ttgatACTGTATGTTACTGGTTGTAATAGACTTTGCGAGTTATgcgtttc
ttttgttttgatagtaTTACCAAATTTATCcatttggcattttttagtAA
GCTCTTTCAGTAACAGGGTTCGTAGTCTTTGGCAGAGGAAGTCTTTTTCC
TTACAAGGACTATTTacagaagtcataaaaaaatacaGTGTTTTGATTGC
CGCTAAGATTCACcaatattttattgtttattttagtGGCTTGAACACAA
ATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAATA
TGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACAA
GGATTGCGTATCACA

Coding sequence (CDS) from alignment at sc0000063:39552..43616+

>TCONS_00006119 ID=TCONS_00006119|Name=TCONS_00006119|organism=Clytia hemisphaerica|type=CDS|length=12270bp|location=Sequence derived from alignment at sc0000063:39552..43616+ (Clytia hemisphaerica)
ATGAATATGGATGAAAAAGAACATTTggagaatttgaaaaacttaTGTCG
TCTTTGTCGGATGAAGGCAGTATCTATAAAAGGCTACAAGGAGGTGAAGC
TTGCTTCCTCATTCAGTGGTCAAATTCAATCTTTGTTTGGGTACGACTTG
AAAGATGACAAAGATGGAGTTCACCCAAAGAAACTTTGCAGCTCTTGTGT
GAGAAAGCTCCGAGACATTAATGTTACAACCCCCATGCACGAGAAGCAAG
AGATTGCCGAATTTTCAGTCCATAAAAGCAAGGAAGACTGTCCATTATGC
TCAAAAACAATGACTGTGTTAAACTTTAAAGTAACACCTTTGAAATGCTT
AACTGTTGCCTCCATTATCAAGATAGCAAAAGAATTGGGACTGACAGAGT
TGGAAACAAGGTCGACCGCAACATCGTGTACAATGTTACGGCCCGTGAAA
TATGATAGAAAACCTTCTGACGACACACAGGCATCACAAGAAGAGAATCC
AGTTAACCCGTTTTACGTTGACATTACTATTGACATCAAAGCAGACCCTG
CAGGAGGATTTTTGTTTCAGACTTTCGTTTATGAGAAAACCAAAAGTTTT
GGTGATGGATTACCAACAAAACTGTCATCTATAGATGATGCTAAACAACT
CTTTGGTCACATTTTAAATGCCAAAGTATGTGAAGGGAATGTTGACACTG
ATCTCCCGAAGTTGACCACCAAAAGAAAGGAGAATATGAATGAAAGTAAA
ACATCAACTCTTCTAGAGACTCCAGAGCTGAAGCAATTCAATAAGGTCCG
TACCACAATTCGCAATCAGAACTGCTCCCTCTTAACCAAAAACGAAAAGC
GATGCAACGAATGCCAGAAGAGTCGGCATGATCTTCAGAAGATGGAAAGA
CGACAATCGATCGAAGCCAAATCAAAAAAGCCACATGCAGCAATGACAAA
AGCTGAACTAACTGATAAACTAACCAAAGAGTTGAAGCGGAAGCAGAAGa
aacttgaaaagaaaattgaaaaacttgttaaaaagGAAGGTGTTGTGCTT
CACGAAGAGGACAATGAGCCTCTTGTACGGGCTGTTGTCAAAAACGAGGA
ATGTCCTTTTGATAAGGGGTCTGCAATGGCTTTGCTATGGCAGCAGCAGA
AAACAGCATCCCACTTCAAAAAACCCACATCAATGAGGTGGCACCCTGTA
ATCATCCGATGGGCTCTGAGCATTTATTTACGAAGTTCAGGTACCTACGA
ACAAATACGTCAAAGTGGTTTCCTCACGCTACCACACAAATCCACCTTAC
AACAATACACTGGTTTCACTGACATCATGACATCATTCAATCCAGATATT
CTCAAAAAGTATGCGGATGAGATGAAACTCTCTAAGTTACCAGAATTTAT
GAGATGTTGCTCGTTGATGTTCGACgagatgaaaataaaatcagGACTGG
TCTTCAGCAAGGCCAGCGGAAAGATCATTGGCTTCACTGAAATTGGTGAC
CTCAATGACGAGATTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAGAGAA
ATCTCGAACAATGGCATCACATGGTCTCGTATTAATGCTACGAGGCTTTT
TCAAGCACTACAATCTTCCGATTGCTTATTTCGCCACAAAGTCTGCATCA
AGTGAACAACTTTACTCTGTCATATGGGAAGGAGTCCGTGTTGCTGAAGC
AGTTGGCTTTAATGTCCATGCTCTCGTTTGTGATGGTGCTTCTTCTAATA
GAAGCTTCTTTGAGATGCATCGAATGGAAAACGGTGAAAATGTCTCAGTC
GATGGTGTTGTCTACTGGTCATTTAACCCTTGTCATCCTGTCCGTAAAGT
TTATTTCATCAGTGACCCACCACATTTGATGAAAACACTCCGAAATAATC
TTGAAAACTCTGGTGGAAATAAAGCAACACGTACCCTTATGaaaaatggt
CAGCATCTATCTTGGAACCAAATCCGGATTCTCTATGAAAAAGACTTGAA
TATGAATGCTGCTCACCCTGGATTGAGGAAACTTCACAAACTCACGAATG
ATCATGTTAATTTAGGACCGAGAACTAGAATGCGTGTAAATTTAGCGGTC
CAGgttCTCAGTAAGTCTGTCGTTGATGCTCTTATCAAGCAAGGCTACGA
GTCCACTGTGGAGTTGCGCAAATTCATAAAGTACTGTGACAAGTTTTTTG
ACATCATGAACATACAAAATAAGACTGCTTggttaaagaagaaaaaacca
aATTTGAAACCTTTCGAGAAACCGAAGCCAGTGGAACAGCTTAAACCCGG
TGAAGAGccagaaaaaagattttggtGGCTTGAACACAAATTCCTGAAGT
ACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAATATGCCTCCAGCA
CAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACAAGGATTGCGTAT
CACAATGAATATGGATGAAAAAGAACATTTggagaatttgaaaaacttaT
GTCGTCTTTGTCGGATGAAGGCAGTATCTATAAAAGGCTACAAGGAGGTG
AAGCTTGCTTCCTCATTCAGTGGTCAAATTCAATCTTTGTTTGGGTACGA
CTTGAAAGATGACAAAGATGGAGTTCACCCAAAGAAACTTTGCAGCTCTT
GTGTGAGAAAGCTCCGAGACATTAATGTTACAACCCCCATGCACGAGAAG
CAAGAGATTGCCGAATTTTCAGTCCATAAAAGCAAGGAAGACTGTCCATT
ATGCTCAAAAACAATGACTGTGTTAAACTTTAAAGTAACACCTTTGAAAT
GCTTAACTGTTGCCTCCATTATCAAGATAGCAAAAGAATTGGGACTGACA
GAGTTGGAAACAAGGTCGACCGCAACATCGTGTACAATGTTACGGCCCGT
GAAATATGATAGAAAACCTTCTGACGACACACAGGCATCACAAGAAGAGA
ATCCAGTTAACCCGTTTTACGTTGACATTACTATTGACATCAAAGCAGAC
CCTGCAGGAGGATTTTTGTTTCAGACTTTCGTTTATGAGAAAACCAAAAG
TTTTGGTGATGGATTACCAACAAAACTGTCATCTATAGATGATGCTAAAC
AACTCTTTGGTCACATTTTAAATGCCAAAGTATGTGAAGGGAATGTTGAC
ACTGATCTCCCGAAGTTGACCACCAAAAGAAAGGAGAATATGAATGAAAG
TAAAACATCAACTCTTCTAGAGACTCCAGAGCTGAAGCAATTCAATAAGG
TCCGTACCACAATTCGCAATCAGAACTGCTCCCTCTTAACCAAAAACGAA
AAGCGATGCAACGAATGCCAGAAGAGTCGGCATGATCTTCAGAAGATGGA
AAGACGACAATCGATCGAAGCCAAATCAAAAAAGCCACATGCAGCAATGA
CAAAAGCTGAACTAACTGATAAACTAACCAAAGAGTTGAAGCGGAAGCAG
AAGaaacttgaaaagaaaattgaaaaacttgttaaaaagGAAGGTGTTGT
GCTTCACGAAGAGGACAATGAGCCTCTTGTACGGGCTGTTGTCAAAAACG
AGGAATGTCCTTTTGATAAGGGGTCTGCAATGGCTTTGCTATGGCAGCAG
CAGAAAACAGCATCCCACTTCAAAAAACCCACATCAATGAGGTGGCACCC
TGTAATCATCCGATGGGCTCTGAGCATTTATTTACGAAGTTCAGGTACCT
ACGAACAAATACGTCAAAGTGGTTTCCTCACGCTACCACACAAATCCACC
TTACAACAATACACTGGTTTCACTGACATCATGACATCATTCAATCCAGA
TATTCTCAAAAAGTATGCGGATGAGATGAAACTCTCTAAGTTACCAGAAT
TTATGAGATGTTGCTCGTTGATGTTCGACgagatgaaaataaaatcagGA
CTGGTCTTCAGCAAGGCCAGCGGAAAGATCATTGGCTTCACTGAAATTGG
TGACCTCAATGACGAGATTTCTTCTCTTGAAAGAAGTTTAAGCAAGAAAG
AGAAATCTCGAACAATGGCATCACATGGTCTCGTATTAATGCTACGAGGC
TTTTTCAAGCACTACAATCTTCCGATTGCTTATTTCGCCACAAAGTCTGC
ATCAAGTGAACAACTTTACTCTGTCATATGGGAAGGAGTCCGTGTTGCTG
AAGCAGTTGGCTTTAATGTCCATGCTCTCGTTTGTGATGGTGCTTCTTCT
AATAGAAGCTTCTTTGAGATGCATCGAATGGAAAACGGTGAAAATGTCTC
AGTCGATGGTGTTGTCTACTGGTCATTTAACCCTTGTCATCCTGTCCGTA
AAGTTTATTTCATCAGTGACCCACCACATTTGATGAAAACACTCCGAAAT
AATCTTGAAAACTCTGGTGGAAATAAAGCAACACGTACCCTTATGaaaaa
tggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCTATGAAAAAGACT
TGAATATGAATGCTGCTCACCCTGGATTGAGGAAACTTCACAAACTCACG
AATGATCATGTTAATTTAGGACCGAGAACTAGAATGCGTGTAAATTTAGC
GGTCCAGgttCTCAGTAAGTCTGTCGTTGATGCTCTTATCAAGCAAGGCT
ACGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTACTGTGACAAGTTT
TTTGACATCATGAACATACAAAATAAGACTGCTTggttaaagaagaaaaa
accaaATTTGAAACCTTTCGAGAAACCGAAGCCAGTGGAACAGCTTAAAC
CCGGTGAAGAGccagaaaaaagattttggtGGCTTGAACACAAATTCCTG
AAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAATATGCCTCC
AGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACAAGGATTGC
GTATCACAATGAATATGGATGAAAAAGAACATTTggagaatttgaaaaac
ttaTGTCGTCTTTGTCGGATGAAGGCAGTATCTATAAAAGGCTACAAGGA
GGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATTCAATCTTTGTTTGGGT
ACGACTTGAAAGATGACAAAGATGGAGTTCACCCAAAGAAACTTTGCAGC
TCTTGTGTGAGAAAGCTCCGAGACATTAATGTTACAACCCCCATGCACGA
GAAGCAAGAGATTGCCGAATTTTCAGTCCATAAAAGCAAGGAAGACTGTC
CATTATGCTCAAAAACAATGACTGTGTTAAACTTTAAAGTAACACCTTTG
AAATGCTTAACTGTTGCCTCCATTATCAAGATAGCAAAAGAATTGGGACT
GACAGAGTTGGAAACAAGGTCGACCGCAACATCGTGTACAATGTTACGGC
CCGTGAAATATGATAGAAAACCTTCTGACGACACACAGGCATCACAAGAA
GAGAATCCAGTTAACCCGTTTTACGTTGACATTACTATTGACATCAAAGC
AGACCCTGCAGGAGGATTTTTGTTTCAGACTTTCGTTTATGAGAAAACCA
AAAGTTTTGGTGATGGATTACCAACAAAACTGTCATCTATAGATGATGCT
AAACAACTCTTTGGTCACATTTTAAATGCCAAAGTATGTGAAGGGAATGT
TGACACTGATCTCCCGAAGTTGACCACCAAAAGAAAGGAGAATATGAATG
AAAGTAAAACATCAACTCTTCTAGAGACTCCAGAGCTGAAGCAATTCAAT
AAGGTCCGTACCACAATTCGCAATCAGAACTGCTCCCTCTTAACCAAAAA
CGAAAAGCGATGCAACGAATGCCAGAAGAGTCGGCATGATCTTCAGAAGA
TGGAAAGACGACAATCGATCGAAGCCAAATCAAAAAAGCCACATGCAGCA
ATGACAAAAGCTGAACTAACTGATAAACTAACCAAAGAGTTGAAGCGGAA
GCAGAAGaaacttgaaaagaaaattgaaaaacttgttaaaaagGAAGGTG
TTGTGCTTCACGAAGAGGACAATGAGCCTCTTGTACGGGCTGTTGTCAAA
AACGAGGAATGTCCTTTTGATAAGGGGTCTGCAATGGCTTTGCTATGGCA
GCAGCAGAAAACAGCATCCCACTTCAAAAAACCCACATCAATGAGGTGGC
ACCCTGTAATCATCCGATGGGCTCTGAGCATTTATTTACGAAGTTCAGGT
ACCTACGAACAAATACGTCAAAGTGGTTTCCTCACGCTACCACACAAATC
CACCTTACAACAATACACTGGTTTCACTGACATCATGACATCATTCAATC
CAGATATTCTCAAAAAGTATGCGGATGAGATGAAACTCTCTAAGTTACCA
GAATTTATGAGATGTTGCTCGTTGATGTTCGACgagatgaaaataaaatc
agGACTGGTCTTCAGCAAGGCCAGCGGAAAGATCATTGGCTTCACTGAAA
TTGGTGACCTCAATGACGAGATTTCTTCTCTTGAAAGAAGTTTAAGCAAG
AAAGAGAAATCTCGAACAATGGCATCACATGGTCTCGTATTAATGCTACG
AGGCTTTTTCAAGCACTACAATCTTCCGATTGCTTATTTCGCCACAAAGT
CTGCATCAAGTGAACAACTTTACTCTGTCATATGGGAAGGAGTCCGTGTT
GCTGAAGCAGTTGGCTTTAATGTCCATGCTCTCGTTTGTGATGGTGCTTC
TTCTAATAGAAGCTTCTTTGAGATGCATCGAATGGAAAACGGTGAAAATG
TCTCAGTCGATGGTGTTGTCTACTGGTCATTTAACCCTTGTCATCCTGTC
CGTAAAGTTTATTTCATCAGTGACCCACCACATTTGATGAAAACACTCCG
AAATAATCTTGAAAACTCTGGTGGAAATAAAGCAACACGTACCCTTATGa
aaaatggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCTATGAAAAA
GACTTGAATATGAATGCTGCTCACCCTGGATTGAGGAAACTTCACAAACT
CACGAATGATCATGTTAATTTAGGACCGAGAACTAGAATGCGTGTAAATT
TAGCGGTCCAGgttCTCAGTAAGTCTGTCGTTGATGCTCTTATCAAGCAA
GGCTACGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTACTGTGACAA
GTTTTTTGACATCATGAACATACAAAATAAGACTGCTTggttaaagaaga
aaaaaccaaATTTGAAACCTTTCGAGAAACCGAAGCCAGTGGAACAGCTT
AAACCCGGTGAAGAGccagaaaaaagattttggtGGCTTGAACACAAATT
CCTGAAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAATATGC
CTCCAGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACAAGGA
TTGCGTATCACAATGAATATGGATGAAAAAGAACATTTggagaatttgaa
aaacttaTGTCGTCTTTGTCGGATGAAGGCAGTATCTATAAAAGGCTACA
AGGAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATTCAATCTTTGTTT
GGGTACGACTTGAAAGATGACAAAGATGGAGTTCACCCAAAGAAACTTTG
CAGCTCTTGTGTGAGAAAGCTCCGAGACATTAATGTTACAACCCCCATGC
ACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATAAAAGCAAGGAAGAC
TGTCCATTATGCTCAAAAACAATGACTGTGTTAAACTTTAAAGTAACACC
TTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAGCAAAAGAATTGG
GACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCGTGTACAATGTTA
CGGCCCGTGAAATATGATAGAAAACCTTCTGACGACACACAGGCATCACA
AGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTACTATTGACATCA
AAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTCGTTTATGAGAAA
ACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTCATCTATAGATGA
TGCTAAACAACTCTTTGGTCACATTTTAAATGCCAAAGTATGTGAAGGGA
ATGTTGACACTGATCTCCCGAAGTTGACCACCAAAAGAAAGGAGAATATG
AATGAAAGTAAAACATCAACTCTTCTAGAGACTCCAGAGCTGAAGCAATT
CAATAAGGTCCGTACCACAATTCGCAATCAGAACTGCTCCCTCTTAACCA
AAAACGAAAAGCGATGCAACGAATGCCAGAAGAGTCGGCATGATCTTCAG
AAGATGGAAAGACGACAATCGATCGAAGCCAAATCAAAAAAGCCACATGC
AGCAATGACAAAAGCTGAACTAACTGATAAACTAACCAAAGAGTTGAAGC
GGAAGCAGAAGaaacttgaaaagaaaattgaaaaacttgttaaaaagGAA
GGTGTTGTGCTTCACGAAGAGGACAATGAGCCTCTTGTACGGGCTGTTGT
CAAAAACGAGGAATGTCCTTTTGATAAGGGGTCTGCAATGGCTTTGCTAT
GGCAGCAGCAGAAAACAGCATCCCACTTCAAAAAACCCACATCAATGAGG
TGGCACCCTGTAATCATCCGATGGGCTCTGAGCATTTATTTACGAAGTTC
AGGTACCTACGAACAAATACGTCAAAGTGGTTTCCTCACGCTACCACACA
AATCCACCTTACAACAATACACTGGTTTCACTGACATCATGACATCATTC
AATCCAGATATTCTCAAAAAGTATGCGGATGAGATGAAACTCTCTAAGTT
ACCAGAATTTATGAGATGTTGCTCGTTGATGTTCGACgagatgaaaataa
aatcagGACTGGTCTTCAGCAAGGCCAGCGGAAAGATCATTGGCTTCACT
GAAATTGGTGACCTCAATGACGAGATTTCTTCTCTTGAAAGAAGTTTAAG
CAAGAAAGAGAAATCTCGAACAATGGCATCACATGGTCTCGTATTAATGC
TACGAGGCTTTTTCAAGCACTACAATCTTCCGATTGCTTATTTCGCCACA
AAGTCTGCATCAAGTGAACAACTTTACTCTGTCATATGGGAAGGAGTCCG
TGTTGCTGAAGCAGTTGGCTTTAATGTCCATGCTCTCGTTTGTGATGGTG
CTTCTTCTAATAGAAGCTTCTTTGAGATGCATCGAATGGAAAACGGTGAA
AATGTCTCAGTCGATGGTGTTGTCTACTGGTCATTTAACCCTTGTCATCC
TGTCCGTAAAGTTTATTTCATCAGTGACCCACCACATTTGATGAAAACAC
TCCGAAATAATCTTGAAAACTCTGGTGGAAATAAAGCAACACGTACCCTT
ATGaaaaatggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCTATGA
AAAAGACTTGAATATGAATGCTGCTCACCCTGGATTGAGGAAACTTCACA
AACTCACGAATGATCATGTTAATTTAGGACCGAGAACTAGAATGCGTGTA
AATTTAGCGGTCCAGgttCTCAGTAAGTCTGTCGTTGATGCTCTTATCAA
GCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTACTGTG
ACAAGTTTTTTGACATCATGAACATACAAAATAAGACTGCTTggttaaag
aagaaaaaaccaaATTTGAAACCTTTCGAGAAACCGAAGCCAGTGGAACA
GCTTAAACCCGGTGAAGAGccagaaaaaagattttggtGGCTTGAACACA
AATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTTGAAT
ATGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAATACA
AGGATTGCGTATCACAATGAATATGGATGAAAAAGAACATTTggagaatt
tgaaaaacttaTGTCGTCTTTGTCGGATGAAGGCAGTATCTATAAAAGGC
TACAAGGAGGTGAAGCTTGCTTCCTCATTCAGTGGTCAAATTCAATCTTT
GTTTGGGTACGACTTGAAAGATGACAAAGATGGAGTTCACCCAAAGAAAC
TTTGCAGCTCTTGTGTGAGAAAGCTCCGAGACATTAATGTTACAACCCCC
ATGCACGAGAAGCAAGAGATTGCCGAATTTTCAGTCCATAAAAGCAAGGA
AGACTGTCCATTATGCTCAAAAACAATGACTGTGTTAAACTTTAAAGTAA
CACCTTTGAAATGCTTAACTGTTGCCTCCATTATCAAGATAGCAAAAGAA
TTGGGACTGACAGAGTTGGAAACAAGGTCGACCGCAACATCGTGTACAAT
GTTACGGCCCGTGAAATATGATAGAAAACCTTCTGACGACACACAGGCAT
CACAAGAAGAGAATCCAGTTAACCCGTTTTACGTTGACATTACTATTGAC
ATCAAAGCAGACCCTGCAGGAGGATTTTTGTTTCAGACTTTCGTTTATGA
GAAAACCAAAAGTTTTGGTGATGGATTACCAACAAAACTGTCATCTATAG
ATGATGCTAAACAACTCTTTGGTCACATTTTAAATGCCAAAGTATGTGAA
GGGAATGTTGACACTGATCTCCCGAAGTTGACCACCAAAAGAAAGGAGAA
TATGAATGAAAGTAAAACATCAACTCTTCTAGAGACTCCAGAGCTGAAGC
AATTCAATAAGGTCCGTACCACAATTCGCAATCAGAACTGCTCCCTCTTA
ACCAAAAACGAAAAGCGATGCAACGAATGCCAGAAGAGTCGGCATGATCT
TCAGAAGATGGAAAGACGACAATCGATCGAAGCCAAATCAAAAAAGCCAC
ATGCAGCAATGACAAAAGCTGAACTAACTGATAAACTAACCAAAGAGTTG
AAGCGGAAGCAGAAGaaacttgaaaagaaaattgaaaaacttgttaaaaa
gGAAGGTGTTGTGCTTCACGAAGAGGACAATGAGCCTCTTGTACGGGCTG
TTGTCAAAAACGAGGAATGTCCTTTTGATAAGGGGTCTGCAATGGCTTTG
CTATGGCAGCAGCAGAAAACAGCATCCCACTTCAAAAAACCCACATCAAT
GAGGTGGCACCCTGTAATCATCCGATGGGCTCTGAGCATTTATTTACGAA
GTTCAGGTACCTACGAACAAATACGTCAAAGTGGTTTCCTCACGCTACCA
CACAAATCCACCTTACAACAATACACTGGTTTCACTGACATCATGACATC
ATTCAATCCAGATATTCTCAAAAAGTATGCGGATGAGATGAAACTCTCTA
AGTTACCAGAATTTATGAGATGTTGCTCGTTGATGTTCGACgagatgaaa
ataaaatcagGACTGGTCTTCAGCAAGGCCAGCGGAAAGATCATTGGCTT
CACTGAAATTGGTGACCTCAATGACGAGATTTCTTCTCTTGAAAGAAGTT
TAAGCAAGAAAGAGAAATCTCGAACAATGGCATCACATGGTCTCGTATTA
ATGCTACGAGGCTTTTTCAAGCACTACAATCTTCCGATTGCTTATTTCGC
CACAAAGTCTGCATCAAGTGAACAACTTTACTCTGTCATATGGGAAGGAG
TCCGTGTTGCTGAAGCAGTTGGCTTTAATGTCCATGCTCTCGTTTGTGAT
GGTGCTTCTTCTAATAGAAGCTTCTTTGAGATGCATCGAATGGAAAACGG
TGAAAATGTCTCAGTCGATGGTGTTGTCTACTGGTCATTTAACCCTTGTC
ATCCTGTCCGTAAAGTTTATTTCATCAGTGACCCACCACATTTGATGAAA
ACACTCCGAAATAATCTTGAAAACTCTGGTGGAAATAAAGCAACACGTAC
CCTTATGaaaaatggtCAGCATCTATCTTGGAACCAAATCCGGATTCTCT
ATGAAAAAGACTTGAATATGAATGCTGCTCACCCTGGATTGAGGAAACTT
CACAAACTCACGAATGATCATGTTAATTTAGGACCGAGAACTAGAATGCG
TGTAAATTTAGCGGTCCAGgttCTCAGTAAGTCTGTCGTTGATGCTCTTA
TCAAGCAAGGCTACGAGTCCACTGTGGAGTTGCGCAAATTCATAAAGTAC
TGTGACAAGTTTTTTGACATCATGAACATACAAAATAAGACTGCTTggtt
aaagaagaaaaaaccaaATTTGAAACCTTTCGAGAAACCGAAGCCAGTGG
AACAGCTTAAACCCGGTGAAGAGccagaaaaaagattttggtGGCTTGAA
CACAAATTCCTGAAGTACTTCAGTGATTGGCAAAGTGAGACGGGTGCTTT
GAATATGCCTCCAGCACAAAGAGCAAAATATTCTATAAGCTTCCAAACAA
TACAAGGATTGCGTATCACA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003494	XLOC_003494	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00006119-protein	TCONS_00006119-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000063	supercontig	sc0000063:39552..43616 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0305974	0.0149187	0.017322	0	0.0206312	0.016303	0.0393379	0.0552414	0.0128919	0.0159688	0	0.0203777	0.0305241	0.0105665	0	0.00932261	0	0	0	0.0340359	0	0	0	0	0.0328511	0.0439783	0	0.0223878	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR021896	Transposase_37

Vocabulary: **Molecular Function**
Term	Definition
GO:0004803	transposase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006313	transposition, DNA-mediated

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006313	transposition, DNA-mediated
molecular_function	GO:0004803	transposase activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00006119 vs. Swiss-Prot (Human)

BLAST of TCONS_00006119 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00006119 (transcript) - C. hemisphaerica