TCONS_00006048 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006048
Unique NameTCONS_00006048
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2769

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006048 ID=TCONS_00006048|Name=TCONS_00006048|organism=Clytia hemisphaerica|type=transcript|length=2769bp
AAGATTGATTTCACCGCCTTTCAACCAAATGActtTCCCATGGCAAGGAA
AGAGTGATCAGCTTAGTCTGTTTACAGTGCAAATACTTGAAAGGAGTGCA
GCAGTAACTAAAGTaatttcgtttgaaaagagaAGTCGAGaatacaatat
tttgaaaaatccaaacttAACGACTAACTTTGGCAATAAACGCTTACAAC
TTTGACTGAAAAGCGTCGTAAATTCATTGTGAAATCAATCGTAAATCATA
TACAAAATGCCTCGAAGATTTGTAAGAGAGTCGAAATTTCGTCATGTTTT
TGGTGAAACGTACAAACGAGATCTGTGTTACGAGAATTTGAATATTACGA
AAAACGTTTGGGATGGTGGGCGTTATTGTGATGTGAACTCGAAATTTGTT
GCTGTGGTATTGGACAGTAATAGCGGAAGCACCTTCGTTGTATTGCCTAT
TGAAAAGACGGGACGCATCGATTCCAACATATCGAAATTTGAAGGACACA
AAGGAAAAGTATTGGATTTACAATTTAATCCATTCAATGCAAATGTGTTG
GCTTCAGCTGGTGAAGATGGAAGAATCAAGATCTGGAATTGCCCCGACGG
TGGTATTACTGAAAATCGATCGGAAACATTATGCGATTTAATTGGTCATC
GAAAGAAAGTCGGTATCATCCAATGGCACCCATCGGCCGATAACGTCCTT
GCAAGTGCCGGTTTCGACTATGACATTATTGTTTGGGATGTTGAAAAAGC
GAGTCCAGTCCGTGTTATCTCGTGTCatagtgacgtcatcaactcAATGT
GTTGGAATTTTGATGGTTCATTCCTGGCAACTTCAAGTAAAGATAAGAAA
GTGAGAGTTATCGACCCAAGAAAGACAGAAGTCGAGGAACAAATCGTACA
CGAATTCAATGCTCATAAAGGGTCCAAACCAGTTCGTGTACATTTTGTGG
ATGAAAAACGTGTAGTTACCATCGGTACTCAACGATCTGCTGCACGTGAA
ATCCTACTGTGGAATCTTGACAATGTAGAGGAGCCCATCACACAACATGA
ATTAGATGATGGTTCGGGAAACCTTCTCACTGTTTACGATGCCTTCCTTA
ATATTCTTTACGTTGCTGCAaagGGTGATTGCACCATCAAATACTTTGAA
ATCAGCAAAGAAACACCTTACGTCCATTACTTAAGTCAATACCAATCAAC
TACCCCTCAACGTGGTTTTGGTGTATTACCTAAACGAGCTGTAAAAGTCA
ATAAGTGCGAAGTATTCCGTTTTTACAAAATGGATTCAAAGAATTTGATT
GAGCCAATCTCTATGGTAGTTCCAAGAAAGtCTGATACTTTCCAACAAGA
TATCTATCCCAAAGTTCCAGGTGACACTTCCGCATTGAAGGCGGATGATT
GGTTTAGCGGACAGAACGCTGATCCGGTCTTGATCTCATTAAAAGATGGT
TTTGTGGCGACAAAGAAAGAATTTATTGCAGTCAATACACATCaggagga
aaatatttttgatgtcgGTTTGAAACAAGCTCCTGCTCGAGAAGAAGACT
TGAAGAAATCGTTTTACGCTCAACAAGATGAATTATCGAAACTACGTGAA
TTGTTGAAAGGGAAAGAATTAAAGATTCGACAATTGGAATATGAGAACAA
ATcgttgaaaaagaagaaatNAAGAATTGAAGATTCGACAATTGGAATAT
GAGAACAAATCGTTGAAAAAGAAGCCACgtgacgaagaagaagaagaaca
aaCTACCGACACCACAACTATAACCAATCAGGTGGAGATTATCGTTACTG
GTGGTGGTGTTGAGTAAATAACCATCATGAGTCCGTATAAAAAatcctgg
tctggaagcttattgttttaataactttttgttagctttttccttttgTG
TATTAGTGAAGTTACGGTagaatcacgacgacgaacgaaaatttaacagg
ctagtgagtttcaaccaatcatatttcgtattttcactagcctattacat
ttttcgacCGTGCGTCGTGATTATCGTGGCATGCTTAAACTCAGTATTAG
TATTATCAAatgataaaatcgatttgtcCAGTTTTTGATCATGTAGTACT
CCTCTTGGAATTGGTTCAACATGATCAAAAAGGGAGCAAAACATACtgat
ttctcaacgcaagttcaatCAAGAAACAAAcggcttccagaccggggttt
tctATACTGACTATGATACTATGATACTATGGGAGAACTGGATAATTTGT
AAATTTATGGAATAATGACAATATTTTGATAAAGACATTGAATTAATTTT
TCTGATAATATTAGATATCGTTTGAGATTGAACTGTATGGACCTAAGAAT
CGAGAACTGTAAACCTATACCATGGTCCTAGTTTAGGATTGACACAGCTG
GCTAAACGACATTATTTCAACATCCATGTATCAGTACCGTTTATTTCGAT
GTGGATGGAAGCATTTGGACGTTTTGTGTCAACTATGGTGAGATGTGAAG
AGATTTTGCTTTGAGCCATATTTGAtgcttttcaaaatattaattaATCT
TGATCACTTTATGGTGACCATCAATTTTGATTCTCAACTGCCAACCATTT
CATAGGTCAAAGGAAAGGTAAACTCAACCAGGAAATTCTTAGTCATTATT
CTAGAAGAAATGTAATTATCTTAAAATCTGTATCTTAGAAAATCTATAGA
TTGCAATTATTTCTATCATTTAGATTGTACGTGAAGTCATATTTATCCTT
GCATTACAGACAATTTAGC
Run BLAST on NCBI

transcript from alignment at sc0000062:165484..174537-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006048 ID=TCONS_00006048|Name=TCONS_00006048|organism=Clytia hemisphaerica|type=transcript|length=9054bp|location=Sequence derived from alignment at sc0000062:165484..174537- (Clytia hemisphaerica)
AAGATTGATTTCACCGCCTTTCAACCAAATGAGTAAGAACTGTTCTTCTC
CTTTGGGAGTTCTTTTTATACAGGAATTCTTATTTGACGTAACAAAATGG
CTCAAAAAAAGCATCTTATATTCGCAATTTTTCGATTCCAACAGCAAAGT
TAAAATCAAAATTCGAAAATTTGTCCTCCCAATAAAATCTTATCGTGTCT
TGACCTAGGCAGATAATATTGAATCTTTTAGATCTTTTATTTTTCTTAGA
AAATAAAACTCAAAATTTTCAGCAAACGCTCTCAGAGACGGAGAGCAGTT
TTTAGTTCTCCATCTGAGTGACATTTCATTGCTGTTGTTCCTTTTTGTAC
AATTTTTTTTCTAGCTTTCCCATGGCAAGGAAAGAGTGATCAGCTTAGTC
TGTTTACAGTGCAAATACTTGAAAGGAGTGCAGCAGTAACTAAAGTAATT
TCGTTTGAAAAGAGAAGTCGAGAATACAATATTTTGAAAAATCCAAACTT
AACGACTAACTTTGGCAATAAACGCTTACAACTTTGACTGAAAAGCGTCG
TAAATTCATTGTGAAATCAATCGTAAATCATATACAAAATGCCTCGAAGA
TTTGTAAGAGAGTCGAAATTTCGTCATGTTTTTGGTGAAACGTACAAACG
AGATCTGTGTTACGAGAATTTGAATATTACGAAAAACGTTTGGGATGGTG
GGCGTTATTGTGATGTGAACTCGAAATTTGTTGCTGTGGTATTGGACAGT
AATAGCGGAAGCACCTTCGTTGTATTGCCTATTGAAAAGGTAAGGTTACT
TAACTATTTCACTTCTCTGTCGCCAGATTTGCTTTGACCCTAGCGAGTAC
CTCACTAAAAACCGGGATTTTTCATCCCGTTTCTTAGCGAGTTCCACTTT
GACGATTTTTGAATAATAGAAAGCTTTCAAGTGCTTTGACGCAAATTCGA
TTTTTTCGCTACTGCAGGAGCTTCGAAAGTTCAAAATGACGTCAAAAAAT
CGAATGTTTGGAGTCCGGAAACCTGGAAAAGACGTTATATGCGTAGAAAA
AACGCGGTTGACGTCTAGTATAGGCTACTTTGACCCCTACTTTTTGCGGG
AAAACTAGCTTGAATTATCTCTCGTCCCAACTAAGATGTAGATGAGACAA
AATTGATTTATGAATTATTCTTCCTGTTTCATGTACCTCGAAAAATATCT
GGAATAAAAAGTTATACCTTAAGCCTATTTTAGGCGCAATCAATCTTTCT
AGCTTTGCCGATTTCTTTTTATTGTCAAGCAAAAAACTCTCAGATTTTTT
GGCTAAGGATTACATAGGCACAAGGCATCTAGAACTCAAATGGAATCATC
CATACCCACTACCAATGGTTTTAGAGGTGGCTTTCGAAGGGGTTGTGAAA
TTTCATTTTTGATAAGTTTTGATACAGCGGAGTCTCTATAACTCAAACGT
GCAAGGGGGAAACAAATTTGTTCAAATTAAGGAAATTTCGAATTATGGAG
TACGGTTTTTTAAAGACATTGTTAACTGAAAGGACGCATAAAACTTGTTG
CGAGTTAAGGAGGTATTCGAGTTAAAAAGGTTCGAGTTTTCAAGTTGGAG
ACTGTACTGTAATATATGATTTCAAAATATTCGCGTTCAAATTCTTCCTG
TTTTTGCTAGTTGTGGTGTGTTTTCATTGATTCGGTTTGTCTTTATTTAT
TTATTTATTTGCTTGTTAGTTAAACTTGAAATGAACTAGAATGAAGAAAA
ACATTTCGCTTCGATTCGCCAAAATAAGTGTACTTTGGTGGAATTTTGAT
ATTCCAGTAAAATTTTAGGACGGGGTTTAATCTGTCACAAAGGATACCTT
TTTAAGTGAGGAACACATTAAACTCTCACCACTTCCACTCTTTGCTTTTA
ACAATCCAATATCTCATCGATTATAGAGTATAAACTTTTGAACGTCACTG
AAAAGTTGAAACAGAACGTATGGATATTCAAGTGTCTATTATCTTTTTTA
GACGGGACGCATCGATTCCAACATATCGAAATTTGAAGGACACAAAGGAA
AAGTATTGGATTTACAATTTAATCCATTCAATGCAAATGTGTTGGCTTCA
GCTGGTGAAGATGGAAGAATCAAGGTTAGTATGTATCTCCCATACAACAG
GGCCCACGTCATTGACCCACTATATTTTTGGCCCCTCCGCTTTCCAAATC
ATGATGTAGACCCCCATAAAACGTCTCTTTAACGTCCATCTAACGCCCAT
CTAACGTCCACAACATGAACATTAGCGAATTTATGTGTCTGTGTTTTTCT
GCGACGGAGACATTAAATTTCTATTATTTCCTAATCCGGATTGACTGATG
ACGATGGTAAATCAGCATAATTACCGTCCTCGATTTTGTGGGTCAGAACA
GCGGGTTGTTCCAAATCGCTTCTGTCATTCCGCTGTACTCAAAAAGTGCA
AATACATAAACTCGCTATTGAACGTTAAACGTTAAATTATAAAACCCTAG
ATACTGCAATTAGTCACTATTGAAAAAATTTCAATGCCTGGACCGTCTTA
AACTGCTTTCAAAAAACCTTTGAAGAGATTCCACGTTTGCATTTGAATAC
CTCTAAATGAATAATTACCTTGTTTAGACAGTTTGACGTCACATTTTACC
CATACAAATGACTAATTTATGTTATGACCTCATCAGTGAATGTCAGAGAA
CTTTTTACATTGACTCAGAATGTTTATCCCTTCGCTCAAGACACAACACG
TTTTTTATAAGAACTTCTAAAAAATGAACCCTTCGGATGTTCTTAAACTT
CTTAGAGTTTTAAGCCCATAAATGTTCTTAAATTTTTCTTATTTTCACTA
TTTGTGAGTATTTTTGTGCAAATTCTCAAGAAAATGGGTGTTTTCTTAAA
ATGTTCTTAACTTGCTCTTAATATTTTGACCATCATAGCTTTTCGTTCTT
ATATGGCCTGCTCTTATAGAAAGAACTTCCACACTAATATCCTCCAGTCT
ACTTCGTCGGTGGATTGGATAAGATTAGAAAAAGAGCATCGACCTATTTT
AAAGATATTTCACAGTGTCTCAAGATAGCCACCTCCTTTTATAATGTCAG
TATTTTAACAGAGTAGCTTATTAGAAAAGCCTGGATTACCAAAATATAAC
TTTACCCCGGATTTAACCTTTATTGAAAAAGCGTATCCACGAAGGTTGAT
AGTTTTACATATAACTTATGAACATGAATGAATAAAAATTTCTTATTTTC
TTTATCCGCAGATCTGGAATTGCCCCGATGGTGGTATCACTGAAAATCTA
TCANCTCTACTCTAGATATTTTATTTTTTACTAAATTAGCCAAATAAGTC
TAACCCAGATTTAACTTTTATTGAATAAGCGTATCCACAAATGATTGATT
GATTCACATAGCACTTAAAAACTTGAATAAATAAAAACTTCATTCTTATT
TTCTTTATCCGCAGATCTGGAATTGCCCCGACGGTGGTATTACTGAAAAT
CGATCGGAAACATTATGCGATTTAATTGGTCATCGAAAGAAAGTCGGTAT
CATCCAATGGCACCCATCGGCCGATAACGTCCTTGCAAGTGCCGGTTTCG
ACTATGACATTATTGTTTGGGATGTTGAAAAAGCGAGTCCAGTCCGTGTT
ATCTCGTGTCATAGTGACGTCATCAACTCAATGTGTTGGAATTTTGATGG
TTCATTCCTGGCAACTTCAAGTAAAGATAAGAAAGTGAGAGTTATCGACC
CAAGAAAGACAGAAGTCGAGGAACAAATCGTACACGTAAGTCTGCATGCT
TTTCTTTGCGATTGTATGATTTTTCCTGTATATGATTACAGTTTTCTTGA
TTCTTTTATTTTTCATACTTAGCGTACTTTCCTTCACAAGGTTGGGTTTT
TATTAAGACGAAATTTTTCAATTCGCGTTAATAAAATGACTAGTAATATT
CGTGTAATAAGGTATTAGATTCTTGGCAAAGCGTGCATTTTTTAATATAA
GATCGCATTGGGCTTTTCCAGAAAAAAACCGTATAGCCCTGTTGAGGATG
TCCATCCCTCTGTGGCTGGAAATTCTGTAACCCCCTGAAATTCCAGGCAA
TTTCAGGTTTAAACCCCTCTGGAATTCTGAATTTTAGTAAGATTTAAAAA
GCTACCTCCATGGAATTCCAGTTATTTTTGACCGAATTTTGTATCTCCTT
ATGGAATTCCGCCACATATCAAACCAAACCCCCTTGGAACGAAAATGGAC
CTCCTCAACAGAGGGTATACGGTTTTTTTCTGGAACAGCCCATTGAATTT
ATCTTTTCTAGGAATTCAATGCTCATAAAGGGTCCAAACCAGTTCGTGTA
CATTTTGTGGATGAAAAACGTGTAGTTACCATCGGTACTCAACGATCTGC
TGCACGTGAAATCCTACTGTGGAATCTTGTAAGCTTTTTTCGAATTATTT
ATCTGATATACATATATTATTATGAAATGTTAGTATTTTTAATCAGTGTT
AAAAGTTCTCCCGTTTTATAAGGATTTCCGTCTCAGTGAAGTATAGAGGC
TTTCCCGTCTCAGAATTCAGCATAATTCGCCAAAAGTTCTAAGAATTATT
AGCCTATACTAGACGTTACCCGCGCTTTTTCTACGCAATTAACGTCTATT
CCACTTTGCGACTTTTTCGAATGTTTTGAGCCCAGGTTTTCGGGCTCCAA
ACATTCGATTTTTTGACGTCACTTTTAACTTTTGAAGACCTTGCAGTAAG
GAAAAATCGAACTTGCGTCAAAACACTTGAACGGCTTCTATTATTCAAAA
ATCATCAAAGTGGAACTCACTAAGAAACGGGATAACAAATCTCGGTTTTT
AGTTAGATACTCGCTAAAGAATTATGTGCTTATTTCAAAGTGTAAACTCC
ATTTTCCGTCTCATACAAAAAATATTGCTTCAACCACACTGTTTAATGAA
TTTTAGATGGTTTGGAAAATTTCGGAAATTTGGGATTTTTATAGAGATTT
CTGAAAAGTGTCCGAGTGATTTAATCCTCCAAAAGTTACGTTATGGACAT
AAGCTAGTCAAACAGCTAGCCAGTTTGATTCGATTCAATTGAACTTACAG
TTGACTCTCTCTAATTCGATCTTCAAGGGATCAATCGATTCTTCGATTTA
GAGAAAGATGCGAACTATAGAGAGTAGTTTAACCACTTTTCTAGCTGAAA
GGGCCAGCATTCTAGTTCGAATTACGTAAAAATTTGAACAATATTATATG
TTCGAATTAGAGAGAGTTGACTGTGTCTTTATTTGAAACTATTTCCAGGA
CAATGTAGAGGAGCCCATCACACAACATGAATTAGATGATGGTTCGGGAA
ACCTTCTCACTGTTTACGATGCCTTCCTTAATATTCTTTACGTTGCTGCA
AAGGTTTGTTTGTTTTATCCCTCATTAACCTTTCTTGAAAACATTTTCTC
ACGACTTTTCAAATTAAAGATCAAATTCGATAAATTTTATATTTAGACAG
TCAGAGAATTGAGAAAATGATATTTGCTCATTCAGACATTTACACAAACC
TCTTGTCTTCTTTATTCAGTGTCATAAATACGTCACTAATTTGGCTGTTC
CATTTAATACCCATTCAAACAGGGGGTAGCTAGACGAACTTTTTCAAGCT
AAAAGAATTCTTGAAATAGTGGGACAGCCATTTGGAAAATAGTAAATTTG
CAAAAAGCCCCCCTCCCAAGGCACTAAGTGATATCGTACCAGAGGAACGA
GGCTATATAAAAAGAAAAAAATATAGATTTAAAAGAAATTTCTTCCTTGG
AAATCCCCCTGGAAATGTCCATTTTCCCCATGTAAGGATATAGAACCGAA
TAGTCCATTGGGCTTTTCCAGAAAAAAACCGTGTATCACCTGTTGAGGAG
GTCCAACCTTTTGTGAACTACCCCTTGGAATTCCAGGCAATTTCAGGATC
ATACCCTCTGGAATTCCGAATTTTTACAAATTTTCAATCATTACCCCCTT
GGAATTCCGCTTATTTTTGACGGATTTTCGTCTACCCTTATGGAATTCCA
CTGCATTTCAAACCTTAACCCCTTGGAACGGAAATGGACTTCCTCAACAG
GGTTGCACGATTTTTTTCTGGAAAAGCCCATTTTGTGTACCTTATGAAAC
CACGCAAATTGAATGTCAACTTATTTTAACAATACAGGGTGATTGCACCA
TCAAATACTTTGAAATCAGCAAAGAAACACCTTACGTCCATTACTTAAGT
CAATACCAATCAACTACCCCTCAACGTGGTTTTGGTGTATTACCTAAACG
AGCTGTAAAAGTCAATAAGTGCGAAGTATTCCGTTTTTACAAAATGGATT
CAAAGAATTTGATTGAGCCAATCTCTATGGTAGTTCCAAGAAAGGTAAAA
TGATTTATGAATTTACGTTTTGGGAAGTGGTATATTATATGTATATTTCT
ATTTTTTACTTGAACTGACCATTCATGTTTCTTATTTGAAAATAATTGAT
ATTTCTTTATGTAACACCCATTAGCAACACGATAGAATGGTACTTTGACT
TTACTTTAGAATTCCATTTTAACGTGGGTTGTAGCATAGTATAAGAAAGC
CGCGGCTTTCTTATACTATGGTTGTAGATACTCTTCAAAAGTCACACCCC
TGTCTCACAGCCCCGGTGGAACTTTTTTCCTAAGTGGGGATAAAAATTCC
TATTGAAATCCTAGGGGGGGATAGAAATTCTATTGTTCCAAGGTTAAAAA
AACCAGTGGGATGGTTTGGAGTGCAATTTTTAAACATGGAATTTCGAGTG
GGGATGAAATCAAAGTCGATTTCCCAGTGGGGCTGAAATTCAAGGGTATT
TTCCCATCAGGGACGAAATTTTTGCTTAAATCCAGTTGGGCTAGGGTCTC
ACAGAGCCTGTGACACAGGGGTGTAAAGTCATTTAAAAAGCTAAACTAAA
GATCTTTTGACAAAAACCTATATGTTGAAGATAAGTTAATGCGATATTCT
CTCTTTCCCAATTTTATTTTTTCTTTGATTTTCAGTCTGATACTTTCCAA
CAAGATATCTATCCCAAAGTTCCAGGTGACACTTCCGCATTGAAGGCGGA
TGATTGGTTTAGCGGACAGAACGCTGATCCGGTCTTGATCTCATTAAAAG
ATGGTTTTGTGGCGACAAAGAAAGAATTTATTGCAGTCAATACACATCAG
GAGGAAAATATTTTTGATGTCGGTTTGAAACAAGCTCCTGCTCGAGAAGA
AGACGTGAGAATTTTTTCCCTCTTTTACTCCCCGGTGTAATACACTTATA
GCGAGTTTATGTATCGGAGAAAATCGAGGGTGACGGTAAGGGAAGTCGAC
GCAGAACAAAGTCGATAGTTGATATGTACTTAAAATAGACGACGGTATTT
TGGTGTTTTTACCATCGTTGAGCAAAGAAGACGGCCATTTTGGTGATATG
TCAACCATCTCCTTCGATTTGCCTCGAATACATAAACTCGCTAATCTTAC
CGTAATAATGGTTATACTTACAAAAAAGTCCGTTCAACTATAAAACCATA
TATGTCACAAATTTGGAATTTGTTTGTACAAATTGTAGAAATTAATTGTT
GTACTTATTTATAAATTAGATATCTCAACTTTGGCAAAAATATTTGGATG
ATAGTTCCAGGACAAGAGAAGGATTCCACATGCGTAATATTTCAAACCAT
CTGATTATCTCTTTAAAGCGAATGGTCTGTAGTCCAAATTTCAGTCNTTT
CAAACCATCTGATTATCTCTTTAAAGCGAATGGTCTGTATTCCAAATTTC
AGTCTTAATACTTTTGTTTTCCCTTACTTTACAGTTGAAGAAATCGTTTT
ACGCTCAACAAGATGAATTATCGAAACTACGTGAATTGTTGAAAGGGAAA
GAATTAAAGATTCGACAATTGGAATATGAGAACAAATCGTTGAAAAAGAA
GAAATNAAGAATTGAAGATTCGACAATTGGAATATGAGAACAAATCGTTG
AAAAAGAAGCCACGTGACGAAGAAGAAGAAGAACAAACTACCGACACCAC
AACTATAACCAATCAGGTGGAGATTATCGTTACTGGTGGTGGTGTTGAGT
AAATAACCATCATGAGTCCGTATAAAAAATCCTGGTCTGGAAGCTTATTG
TTTTAATAACTTTTTGTTAGCTTTTTCCTTTTGTGTATTAGTGAAGTTAC
GGTAGAATCACGACGACGAACGAAAATTTAACAGGCTAGTGAGTTTCAAC
CAATCATATTTCGTATTTTCACTAGCCTATTACATTTTTCGACCGTGCGT
CGTGATTATCGTGGCATGCTTAAACTCAGTATTAGTATTATCAAATGATA
AAATCGATTTGTCCAGTTTTTGATCATGTAGTACTCCTCTTGGAATTGGT
TCAACATGATCAAAAAGGGAGCAAAACATACTGATTTCTCAACGCAAGTT
CAATCAAGAAACAAACGGCTTCCAGACCGGGGTTTTCTATACTGACTATG
ATACTATGATACTATGGGAGAACTGGATAATTTGTAAATTTATGGAATAA
TGACAATATTTTGATAAAGACATTGAATTAATTTTTCTGATAATATTAGA
TATCGTTTGAGATTGAACTGTATGGACCTAAGAATCGAGAACTGTAAACC
TATACCATGGTCCTAGTTTAGGATTGACACAGCTGGCTAAACGACATTAT
TTCAACATCCATGTATCAGTACCGTTTATTTCGATGTGGATGGAAGCATT
TGGACGTTTTGTGTCAACTATGGTGAGATGTGAAGAGATTTTGCTTTGAG
CCATATTTGATGCTTTTCAAAATATTAATTAATCTTGATCACTTTATGGT
GACCATCAATTTTGATTCTCAACTGCCAACCATTTCATAGGTCAAAGGAA
AGGTAAACTCAACCAGGAAATTCTTAGTCATTATTCTAGAAGAAATGTAA
TTATCTTAAAATCTGTATCTTAGAAAATCTATAGATTGCAATTATTTCTA
TCATTTAGATTGTACGTGAAGTCATATTTATCCTTGCATTACAGACAATT
TAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003448XLOC_003448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006048-exon-sc0000062-1575043694:174506..174537TCONS_00006048-exon-sc0000062-1575043694:174506..174537Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:173749..174173TCONS_00006048-exon-sc0000062-1575043694:173749..174173Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:172414..172536TCONS_00006048-exon-sc0000062-1575043694:172414..172536Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:170753..171073TCONS_00006048-exon-sc0000062-1575043694:170753..171073Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:170110..170226TCONS_00006048-exon-sc0000062-1575043694:170110..170226Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:169135..169239TCONS_00006048-exon-sc0000062-1575043694:169135..169239Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:168144..168350TCONS_00006048-exon-sc0000062-1575043694:168144..168350Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:167284..167502TCONS_00006048-exon-sc0000062-1575043694:167284..167502Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1575043694:165484..166703TCONS_00006048-exon-sc0000062-1575043694:165484..166703Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:174506..174537TCONS_00006048-exon-sc0000062-1510915933:174506..174537Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:173749..174173TCONS_00006048-exon-sc0000062-1510915933:173749..174173Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:172414..172536TCONS_00006048-exon-sc0000062-1510915933:172414..172536Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:170753..171073TCONS_00006048-exon-sc0000062-1510915933:170753..171073Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:170110..170226TCONS_00006048-exon-sc0000062-1510915933:170110..170226Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:169135..169239TCONS_00006048-exon-sc0000062-1510915933:169135..169239Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:168144..168350TCONS_00006048-exon-sc0000062-1510915933:168144..168350Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:167284..167502TCONS_00006048-exon-sc0000062-1510915933:167284..167502Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1510915933:165484..166703TCONS_00006048-exon-sc0000062-1510915933:165484..166703Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:174506..174537TCONS_00006048-exon-sc0000062-1491911889:174506..174537Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:173749..174173TCONS_00006048-exon-sc0000062-1491911889:173749..174173Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:172414..172536TCONS_00006048-exon-sc0000062-1491911889:172414..172536Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:170753..171073TCONS_00006048-exon-sc0000062-1491911889:170753..171073Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:170110..170226TCONS_00006048-exon-sc0000062-1491911889:170110..170226Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:169135..169239TCONS_00006048-exon-sc0000062-1491911889:169135..169239Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:168144..168350TCONS_00006048-exon-sc0000062-1491911889:168144..168350Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:167284..167502TCONS_00006048-exon-sc0000062-1491911889:167284..167502Clytia hemisphaericaexon
TCONS_00006048-exon-sc0000062-1491911889:165484..166703TCONS_00006048-exon-sc0000062-1491911889:165484..166703Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:165484..174537 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.000731307	0.0862864	0.107258	0.545279	4.97338	1.99093	5.22795	6.05645	39.141	34.0377	58.5759	64.8532	20.8211	20.7571	9.4092	12.7629	34.092	32.3465	12.7959	16.469	17.5075	20.1446	9.01194	4.26846	1.82911e-10	0.304412
Blast
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BLAST of TCONS_00006048 vs. Swiss-Prot (Human)
Match: COR2B (Coronin-2B OS=Homo sapiens GN=CORO2B PE=1 SV=4)

HSP 1 Score: 424.091 bits (1089), Expect = 8.530e-138
Identity = 210/468 (44.87%), Postives = 320/468 (68.38%), Query Frame = 2 
Query:  275 RESKFRHVFGETYKRDLCYENLNITKNVWDGGRYCDVNSKFVAVVLDSNSGSTFVVLPIEKTGRIDSNISKFEGHKGKVLDLQFNPFNANVLASAGEDGRIKIWNCPDGGITENRSETLCDLIGHRKKVGIIQWHPSADNVLASAGFDYDIIVWDVEKASPVRVISCHSDVINSMCWNFDGSFLATSSKDKKVRVIDPRKTEVEEQIVHEFNAHKGSKPVRVHFV-DEKRVVTIGTQRSAAREILLWNLDNVEEPITQHELDDGSGNLLTVYDAFLNILYVAAKGDCTIKYFEISKETPYVHYLSQYQSTTPQRGFGVLPKRAVKVNKCEVFRFYKMDS-KNLIEPISMVVPRKSDTFQQDIYPKVPGDTSALKADDWFSGQNADPVLISLKDGFVATKKEFIAVNTHQEENIFDVG---LKQAPAR-EEDLKKSFYAQQDXXXXXXXXXXXXXXXIRQLEYENKSLK 1660
            R SKFR+V+G+   R+ C++ + ITKNV D   +C VN++F+A+V +S  G +F+V+P+E+TGRI+ N  K  GH+G VLD+++NPF  N++AS  ED  ++IW  P+GG+  N +E L +L GH ++VG+++WHP+ +N+L SAG+DY +++W+++   PV++I CH+DVI  M +N DGS L T+ KDKK+RVI+PR   V    + E N  K  +  RV F+ + KR++T G  R   R+I LW+ +++  P+ + E+D  SG L   YDA  ++LY+A KGD  I+Y+EIS E PY+ YL +++S  PQ+G GV+PK  + V+ CEVFRFYK+ + K LIEPISM+VPR+SD++Q+DIYP  PG   AL  D+W  G N DPVL+SLK+G+  + K        +++++   G   L+  P R E +L + F+ QQDE+ +L+E L  K+++IRQL+ E K+L+
Sbjct:   13 RSSKFRNVYGKVANREHCFDGIPITKNVHDN-HFCAVNTRFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRV----LQEANC-KNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLR 474
The following BLAST results are available for this feature:
BLAST of TCONS_00006048 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COR2B8.530e-13844.87Coronin-2B OS=Homo sapiens GN=CORO2B PE=1 SV=4[more]
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