TCONS_00006027 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006027
Unique NameTCONS_00006027
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2086

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006027 ID=TCONS_00006027|Name=TCONS_00006027|organism=Clytia hemisphaerica|type=transcript|length=2086bp
ATTGAAAGCGATATGGTTTAAGGGAAAGAGGGCTGAATCATAATGAAAGA
TTTGAGTGAAGTTCTTGCTCTTGTTCGCTCGAGAAGGTTGTAGAGTGCTG
AACGAAGAGAATGCAGTTATGGTGCCGCCGATAATTGAAGACGTCATCAA
AAACAACAGCCACCAAGGTGGCGGCGGAGATTCATCAACCGGAGAAAATT
CATCACCGGAAACACCCACCGAACCAGAACATTACAAAAACGAAAcacaa
aaggaaaagaaaaagaaaaaacggAAAAAGGATCGACAACCAACGGTAAC
AATGTCACCCCCGGCTGACGCACAAGTTCCAGTGTTCTTTGCAGACGATA
TACGGCATCGAGACGggggtcaaaataagaaaaaccatGACAAAATTTCG
TCAAAGAATTCCGGATTGTCTACACCGAAGATAGAGAAATCATCAAGTTT
TAAACGAAAAACGAAGCCACCATACTTGGAGTCAATGATGGCAAGAGAGT
ATAACTCTGATCAAAATAGTAAAAGTCCGAGCAGACCTGACTCCcgtaac
aacaacaacaacacaaagAATGATACAGAATACAACATTGTACTGTTAGG
AGATTTTGGAGTCGGAAAAACtgctCTTGCAGTTCGTTTTGTCACGAGGC
GTTACCTACATGAATATGACCCAACATTAGAACGCACGTACGAGAAGCAA
ATACAATGTTCAAATGGATCAGCCAAAGTCAAATTATGGGACACTGTGAA
CAAGTCTTTCGATGCGTATACCGAATACGCTGATGGATTCATCGTGATGT
ATTCTACAACCTCGTCGCAAACCTCTCAAAATGCACAAAACACTATAAAG
ACAATACGAGCTTCAAAATACGCTGCCGTTCGAAGCGTCCCAATCTTGTT
GCTAGGCACTAAATGTGAATTAGAGCATGCGCGGAAAGTACATGCTAAAG
AACAAGAAGCCTTCGCAAAGGCTCATGGGTGTTTATGGCGGGAAATTTCT
GTAGCGTGTACGATAAATATTGATGGGACCATTAAAGGTTTGATCGAGGA
AATAATAATAACGGACAACGGCCGAATTGATTCAAATGGACATAGTAAAT
TAACAGCTACTACGAGTTTGTCGCGGAAACCGAGTGCTGCTAAAAAGCAT
TTGATGAAAAGTTTACTATCGTCCAAAAAGAAGGAGAAATCTTGATATTG
ATAAATGCATCTGATTGTTGGGAAGATGTTGAAAGTATGAAGGTttataa
tgagaaagaaaaacgaTTTCGATCATTTATGGTACCATATAGAGCGGTAG
TAGAGCTTTCAATTCCAAAGNACGATTTCGATCATTTATGGTACCATATA
GAGCGGTAGTAGAGCCTTCAATTCCAAAGTTGTCAAGCTCGATGTCTTTT
AATAAGATGCAATAAATTTCGAAGCTTGACCGTACCATGTATGATCGCGT
AAAACGATTATGAAATAACGTTGAataaatagaccttatcggagtttttt
tttctaaaaaagcgatgcattgtgggattgttttaagtgtattacaatat
aaatctctaggaattcctcgagggaattctaatGTAATACActtgaaaca
atcccacaatgcatcgcttttttagaaaaatcaaaaactctgataaggtc
tATTAAGTAAAACTAACAGAGAAAATTAAACTCGAAGAGCTTCGGTTCAA
GAAAATTGTCGAGACATATACAGAATTCGAAAACGGCATCAACATTTGGA
ATAAAATTTCAtatgatattttggtttaataaattgtataaattGGAAAT
AGGTATTTTTGTAATTATAATTTGATGAAAGAAACATTATAAATTTCTAG
AAAACTTTTTTGTACCACTCAGATATACCATTCCAACGAGATGTCTAATG
TCGTAAggtattgttggaaagataataaTATATGTCCCGCATAAATATAT
AAAACAAACCTTAAGTGGGTTAATTTTGGCGGGATTAAAATTGGCGAATT
tagtgattttcagaaaaattcgCAAATATAAGTTCATTGGACCATTCGAG
TTCTGAGgactgtattcatgatatgcaccactggaa
Run BLAST on NCBI

transcript from alignment at sc0000062:624461..635928+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006027 ID=TCONS_00006027|Name=TCONS_00006027|organism=Clytia hemisphaerica|type=transcript|length=11468bp|location=Sequence derived from alignment at sc0000062:624461..635928+ (Clytia hemisphaerica)
ATTGAAAGCGATATGGTTTAAGGGAAAGAGGGCTGAATCATAATGAAAGA
TTTGAGTGAAGTTCTTGCTCTTGTTCGCTCGAGAAGGTTGTAGAGTGCTG
AACGAAGAGAATGCAGTTATGGTACGTTAACCCATATTTGAGACCATTCA
AATTATGAGAATTATCTTTTATacggggtggggggggggttaatTTTCAT
GACAAGAGGAACCTTGGGATAAAAGGAGAACATTTTTATCCTTACTGACA
ACAGTGTGGTAAAAATGCGCTCTTTCGCTGAGTCTGGATCAAGGCTTGGT
ACTGAAAACATCATTATTTCTGCACTTCTCTATTTGGGGGCACCATTTTA
GTGATCAAATTCATTTAACTTATCATTTTCAACCAAACGcattacatttc
aaaatcaacaaaaatagaAGGTATAACTTTACTATAACTTTACGTTTCGC
TGGGAATAATTCCTgacatttatgaaatttttttctacgGGCCCAACCCT
TAAACACCGGGTGTTAATAGTTGTACTATTTAATTTTGCCACTAATGAAA
AAACAGCTTTTTTCGGCTGTTTCCGTATCAAAACAGATGTCATAGATATC
ATGAATTAAACCAGCATGAAGTAGCGAGTTATTTTTGTTACATATAAGAA
TAACTTTCAAAAATAGATACACTAACAGAGCAGACAGGTTTGATGCGGAA
ATGTCATCTCCAATTTCTTTCATCTTAACCGCAAAGTTAATAACGTTTCT
TTGTTGGTATCAAGGAGAATATTATACTTTGACTTGATGTCTGGATTCTA
GAAGTAGTGGTAGGTATATACTCTTTTGGAATTTGAAGATTTAATCTAGT
AGTGAATGCATGTGAGCTTGTTTGAGGCTTAGCAAAGGAGCAGATTACCA
GGTAAGATTTCCTACGACATTTAATTCtgcatattttttttcgaaggaGT
ATACTACCTGAGTTAAAAGGGAAAACAGTTTAAGGACATCATTTTAACAT
ATAtccaactacacgtttttttttataagaacgtcaaaaattttcgaagc
cttcggatgttcttagttttttggatttgaagcctaaaaatgttcttatt
ttcagcattttctgagcattttgatgtaatttcttaagaaaatNgttctt
attttcagcattttttgagcattttgatgtaatttcttaagaaaatgcat
gttttaaagtctccaaagccttagaatgttcttagaatgttcttaaattt
ttgggcctcgaagccttatgttcttatatagtttgtttatataaaaaaaa
cgtgtatttttaaacaaaagaaagaacattCTTCCATTCCCGCACCACGC
GAGCACAAAATTTCAATTCAGCTTGTCAGTATTCGAGGTCCACCTCCGTT
ATATTTTAGGGAATGCAAGCAAGCAAATATGTGCATCTTGGTCAGGCTCT
CAATAATGCTTACAATTCTAAAGACGTGTTTTGGGACCCAATAGATccta
tcggagtttttgatttttctaaaaaagcgatgcattgtgggattgtttcg
ggagtattataatagaaatctcttaggaattcctcgagggaattctattg
taatacccccgaaacaatcctgcaatgcatcgctgtttcagaaaaatcaa
aaactccgataaggtctattctaAGTCTAGGCGTTCTTATTAGTGTCACA
TATGTGTTTGGTGAAGGAATAACATAAATTGAGTATAAACAGAAACAAAA
AATCTGGAttaaaggaaaatttgaaaCCATTAATTTTCACCAACGTCAAA
ATGAGGTCATTGCACTATTTCATAACACAAATCTGCCTATTGATATAAAT
ACCATCGACATGCATTAGATAAGGATCTGTTGGTTTTAAAAAAGTCATTC
GAAAAATCAGATGGAACAAAGATTAAGTTTCAATAAACGCTATTGAAGGT
AATCTAGTACTTAGAAGGCTTAAACGTTGATGACATCGACTAAAACTGTG
CTaatcaaacaaaattttataaacagactgacagtctgtgccactaactc
gatcgggaagattcttccgaaatgggaagaaccttcccgaacgggaagaa
cttACTCTAATTTTTTCTGCCCGTTTGagaagattcttcctctttgggaa
gATTGACTGAATCTTCGGCGAAGCTGTAAgatgaccggcgaaagttgaaa
ttttttggatgtGAAAAGGCAttaaattttaaggtttttcacagaaagaa
aaataaactttaccgtagaaatcttgttaaattgtgaaaaaactgcgtaa
gcttcccaaacgggaagttccaacccgattgggttttccttattttcaaa
tttttttcctgCTTCTTCTCGATCTGGAAGTCCGTTTTTTAACTCTTACT
CATTCATTACCCGTTTGGGTGTTaagttaatttcccgttcgggaaggttt
ttcccatttcggaagaatcttcccgatcgagttagtgccACAGTGAACAC
AGACATCGTGAAATgacaaaaatggcaaaaaatgttAGAAATGCCTCTGA
CAAAATACCATTgaaatgaaaaactgataacTTAGGCCCTAGAAGAGGGT
GATTCTAAGAATCAAGTCAGCGTAACATGAAAATGTTTTGGGAAATAATT
TTTACCCGATttcagttatatttttccaaaattttgttttgccaTGACAA
CCGTAAAGTTTCCACCACTAGCACAAATGACAATAGACCTTAACGGGATA
AAGAACCAGAGACAAAAGGGGCTTATTATAATCAATATATTATAAGTGGA
CATAAACGCAAATGTAATAATAAAGTTGAGATGATGAGAAAGTTTGATAA
CAGATTTATTCATAAGTAGGTTTAAAAGAGATCAATGAAATTATAAAGAG
AAAGCATTTGGCGTGTATCGATATAAACCTTTAAACAGGAAACACGGTAG
GCGGTTATAATGTTATAGAAGAGTAAGGATTCGAGGTATGAAATGCTTGA
TGAACATTTTATGTTCCGCTAAAAGTCTGcataaaatgtcaaattttaaa
CACAGGAACATATTGGAGTAGTATAGAATCTGTGCAATACAATTGTTATG
GGATAACATCAACTTGAACAACTACAGTTTATCCATCCCAAACAAAATAG
tagttttcagaatttttagaattcaaatttttgaaggcataaataaatgt
atttttaatgggTTATCGTCAAATAATCAAACACATACGgaagaaattgt
aaaaatgtttgatttaaATTACGTTTCTTTATGTGGGACTTAGCGAGTTT
TTGGATTTCAAGGAGATATGGTTAGGTTGGACCAATTCCTTTCTGATGGG
ACTATCGTGGTTTTGAAGTAAAGATTCAAATCGTTATCAATTCCAGAACA
AAGGAATTTATCAACCGTTATTGAtcaaatgaaacttttttccaCAGGTG
CCGCCGATAATTGAAGACGTCATCAAAAACAACAGCCACCAAGGTGGCGG
CGGAGATTCATCAACCGGAGAAAATTCATCACCGGAAACACCCACCGAAC
CAGAACATTACAAAAACGAAAcacaaaaggaaaagaaaaagaaaaaacgg
AAAAAGGATCGACAACCAACGGTAACAATGTCACCCCCGGCTGACGCACA
AGTTCCAGTGTTCTTTGCAGACGATATACGGCATCGAGACGggggtcaaa
ataagaaaaaccatGACAAAATTTCGTCAAAGAATTCCGGATTGTCTACA
CCGAAGATAGAGAAATCATCAAGTTTTAAACGAAAAACGAAGCCACCATA
CTTGGAGTCAATGATGGCAAGAGAGTATAACTCTGATCAAAATAGTAAAA
GTCCGAGCAGACCTGACTCCcgtaacaacaacaacaacacaaagAATGAT
ACAGAATACAACATTGTACTGTTAGGAGATTTTGGAGTCGGAAAAACtgg
taagaaacattttatgTGTTCGGTCAAAAAATGGAAGAATAGACCTTAtg
ggattttttcatttttctaaaaaagcgatgcattgtggcattgtttcggg
agtattacaatagaattccctcgaggaattcctaagacatttctattgta
ataccgccgaaacaatcttacaatgcATCgctattttagaaaatttaaaa
actccTATAAGATCTATACTTTATCTACACGATTCTGTATTTAAAGTCAT
TTTTGTGATAGACAAATCAGGTGCCTTTCTTATGCTGATTTTTAATCACT
CTGCATTTACGGTGCCGAGGGAAAGGGTGTGGTCGTCTGGTCGTCCGCTA
CAGGCAATGCGGGAGGgagaaaaagttgttttttattttgttcatgATAA
TTGTAGGCAAATGGTCAAAGCTACGTTTTTAAATTATATCTGTATATGAT
CTAaactttctaaaattaaattctgTTTCAAAGGTATGTGGACACTTtag
ttttttttgcattttcccaGCACCAGACTTTAGGTAGTAAAATTCGACAA
TTAAAAAACTTCTCCACAAGAGAGGCAATTACGGTGCACACACATATagt
ggactctctctaattcgaacttcaattattcgtttttttctataattcga
actaattctcggATTGAAAATGTAAACTATGAAACAGATGATGTCATAAT
TTCCATAAAATATCGTGTGATATTAAATAACAATTTCTATAAAAGATGAG
AGAGAGAATGTGACATGTTTTTATAAGGTGTGTCAACTTGATAACAGATC
AACTTGTCAAAACTTCTTACAAAATAATTTCTTGTTGTAGTCAATACAAG
AAGCCCACGCAATATTTCAAATCTTTTGCGTCTTTCAGGTTTAACTTCaa
cttgtttttaaattttcaccaTACTTGAAACACTTTTGAAAGGCGCTTGT
ATATAAATATTCCAATTGAAAATCAACCAAGGGGGCTCTAGCCAACTATC
TTTACTATGTACAAGAGTAGAGCCTCCACAACTTGAACGCCCGGGTGCAA
GGGACAATTGTACCGAGTTTATAAAGAGGTAAAATAGCCTGCTTTTTTTT
CAAGGGACCACTATAATTAGGGAGACTCTACTGTCTTTAAGGTCTAATAT
GTCATGCAACGACGCCAGAGTAATTGTCAAAGAAAAGTATTATCACGTAA
TAAAGGTCAAAACCGTATCTAACTTGAATAGAATTAATTAGTTTGATAAT
TACTACCTAAAAAGAAGGACTTAATCCGAAAACAAGGATATAAAATTTAA
TTACACTCATCTATGTTTAGCTCATCACAATCCGAATTAAGGATTCTACA
AACTCTTTTATATCCGCACACTAAGGTCAAAGACAGCATGGTTTCAGCCC
CCTAGATTTCTAAAGGGGACCTAGGCCCAGCTGTGAGAGGGGAGCTGAAA
TTTACCTGCTGATCTGATAGACTCTGGAGGATGTTTCAAATTGAATACTG
CACACAATTCTTAATTTCAATTCTCCATTTTCAAGTTTATTATGATTCGT
GTCTGCCGTTTTTTTGGCAACAATCGTTAagattttaggaatgacaagaa
aacaaaagtgtcatttaaaaaagattctcGGTTAGTCAGGGCTCCTACCA
ACCTAAAAcaggttaaaaaaaaacaagttaatCAATGGGGGTACCTATAA
ACCCGAAGCAAATTTTTAAGGAGACCTTAATCATTGGATGTGCCATGTTT
TCTTCGGGTgactgaaaagtgggctgaaatcACGTGACACGCTGATTCTC
TAGGGTTATTTCAATATTTGTTGgctgaagattttcttttttgtctctCC
TATCCCCCTCTTTCTAATATTTTCATTCATCTATCATCTACATTTCAAAT
CAAGTAATGACAAATCTgaattatctttcttttttcagctCTTGCAGTTC
GTTTTGTCACGAGGCGTTACCTACATGAATATGACCCAACATTAGGtaag
cattttcttatttgactTGAAATTCTGATGTACCCCCGTCTCTTTAGAAC
TGTCTGCAAGATGGAGTGCTGAGTCCTAAAAGTGACAGATATTTCACATT
CAGCTAGTAGCAATTGAAAATTACAGATTTACAATTTTGGATATTGAGAA
TTTAAGAACTAAATGATGTGGCATTGCATAtagattttgaaattaaatca
cCCCCTTCCATTTCGATGTCGAAATCTCTCAAAATCAATCTATTTGGTTT
TGAACTAGATTTCTTTAAACGGAAAAATTAAAGACTTGAAATATAAGAAG
TTTTTCATTATTTgctatttcccatccaaaagttttatttctacCCTCTT
TGggactttaaactcaatggcgAAGGAAATATCtgaaatgggctattcca
gaaagaATTTGTATCCCCTGTGTTGAGAAGgtcttttttgtgaaaagtga
CCCCCACCcatggatttttttcaatttttcaggaccccttTGGATTTTCC
ACATCATTTTGCTGACCACCCTGTATTTTTACATTGAAAAACCAGACCCC
CTTGGATCTTTTATTTTCCTAAACCAccccaccctggacgtcacacctcc
tcgacgttacagactatttctgggcCAACTATAGCCCAACAATGATCTTA
TAACCATAATTTTAGAACGCACGTACGAGAAGCAAATACAATGTTCAAAT
GGATCAGCCAAAGTCAAATTATGGGACACTGTGAACAAGGTGAGCTAGAA
TAACTATATCCATATGTGTGACTAAAAGAACGGCATAAAAAGGCATTAGT
acacgattttttataagaacaggctatataagaacataaggcttcgatgg
ttagccatttttaagaataatttaAGGCTTTGTGAACTCTCAAACATCCA
ATTTATTtatcttaggaaaatgggcaaaattactcacaaaatggtgtaaa
aacacgttaagaacattttttaNTGGgcaaaattactcacaaaatggtgt
aaaaaacacgttaagaacatttttttggctttttaggCATCTCTACCTTG
AATAAAAAGTGAAGTAGGAGCAAAATATAATGTTTATCGCTGCGAGCAGG
GTTCGAACCTGCGCGGGTAGaacccattagatttcaagtctaacgccttt
aaccactcggccatcacAGCTTACTATCATCAGATGAAAACAATTGCCTT
ATAACAAATTCTTCTTTACAGCGTTGTCATAGAAAGAAATATTATCATTA
CTATGTACGAACTATTTCCTCTAATTTCACACATATACGATTGCTACTTT
TATTATGATCGTacgtacatgttttttataagagcatccaaaaagttttc
aaacCATCAGATGTTCTTAAACGTATTTGTTTTGAgccttgttcttattt
tcaccattttgcgagtattttgtgtatttttcatagaaattgggtgtttt
agtcCACAAAGCTTTGAACTGTTCTTTACagtattcttaatattttgtca
ATTGAACCCTTAATAGTCATTTCTTAAAAAACGTTTATTGCTTCATAATG
ATTATTTCCAAGCAAGATCAGGTCAGTCGAAAAACAATTGAATGAAAgct
aataaaccagctgcgctggaaggtcagcccaataagcttaaaacCTTAAC
GATTAGAAGAaagtacaatcaagaaacctaattcgatgttaaagccaaag
aggttgaaaagctcattttggttgaacttcagacaaaaaaaagtttaaaa
caaaGTTGAATTTGTCCAAAGCAGACAGAGATGTGATAGATTATTTCATT
CTTGGAATTTCACACAAATCATTTCGTTAGAATGTCTTAAACGATTAAAC
CTGTTCTTTATTCTCTGAGAAAGTATCCGAGGCGGCCGCTTTATAATATG
TTCACTGCAGCTTCGTcacttttgttcatttttatgtagatttatttatt
ttttctccagTCAAGGCCGCTCCTCGTTGAGTGTGCACGGTTCCGGGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacatcattagacaagaa
attcagacaaaatgcttataatgacacaaaattttcaattggaaatatct
ttccaagactgtccccagaacagctgaaattaacatacgtaagacttgag
tgtcttggttccactgtggtatgaaaatcctttggaggcacgtggtggca
aggtgtttttttgaggttaaagcttgaaaatttccggtgtcaacattcaa
tttcttatacacaacacgtcttttgcatctttctcgcagcctgaaacgtc
ataacgacttatgattagcaattaagtggaagaatctgaatctcacagga
aagttttaagtctcttttgggaattggatgagtgatttttgataagaaat
gcaataaaaatgcttcgaaaaatcatttaatgagggaaggagagtgNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNaaggagagtgaacaataatatcatta
ctgcggacatagctagtacacgagaaatcggcaaaaatctgttacttgta
tatccagtgtataatataTCCTTGCTTTGACGTTCCTTTGTTACACACAA
AACTCTCCAGACAAGAAACAGAAGAAATTCTCAAAACCAATcatgaaaaa
ctttcttttacactctctatttatttacaatgcaatagcttctttcgatt
tattgaataaacaaaaaaaatttttaattatagTGTTCTTTTATTATCAT
GCGCAAATCTTTTAATGAAGTTATCGatgtgtttcttttctctttcaaga
aaaaatatttttcgcgccaaagttttcccgataacttgttttccgaaaat
aatccgaataTCGGAATTAATTGGGTGCGATCAGAAAATCGGGCGatcgg
aaaaatcaaaataaatcttaTGGCAATGGCGACGATAGCGAATGGGGCTG
ACCAAttatagtccgtataaaaaaccccggtgtGGAACTGGaagtctttt
gtttctttccattgtttctgacttgaacttgcgttgagaaattagtttgt
tttacTAACTTTTtaatcatgtgattaaatcttaaacgaATCCCAAGAGg
cgtacttggtaacgtgatcaaaaacttcgcaaatcgatttttatcttttg
ttattagtgaggttaagtaaatcagtaaaatcacgacgacgaacgaaaat
tcaACAgactagtgagtttcaaccaatcaaatttcgtattttcactagcc
tattacatttttcgtccgtcgtcgtcaTTATCcttgtatgcttaacctca
ctattaaaaagctaacaaaaagttaaaatcaatacaccttttcgaccgta
gtcgcgcgggcattttttttatctcactaaaaccgtcccaatcctttttt
gacgcatttttctattgtctattggtgcgaaaaaaggactgagaaggttt
tagtgggataaagcggacaaaaaaatgcccgcgcggcaattggtggctac
ggtcgaaaaggtgtataagcttccagaccaaggttttttatacggactat
gtaATTTCTAATTAAATCCTTTTATTTCTTTCCCAGTCTTTCGATGCGTA
TACCGAATACGCTGATGGATTCATCGTGATGTATTCTACAACCTCGTCGC
AAACCTCTCAAAATGCACAAAACACTATAAAGACAATACGAGCTTCAAAA
TACGCTGCCGTTCGAAGCGTCCCAATCTTGTTGCTAGGCACTAAATGTGA
ATTAGAGCATGCGCGGAAAGTACATGCTAAAGAACAAGAAGCCTTCGCAA
AGGCTCATGGGTGTTTATGGCGGGAAATTTCTGTAGCGTGTACGATAAAT
ATTGATGGGACCATTAAAGGTTTGATCGAGGAAATAATAATAACGGACAA
CGGCCGAATTGATTCAAATGGACATAGTAAATTAACAGCTACTACGAGTT
TGTCGCGGAAACCGAGTGCTGCTAAAAAGCATTTGATGAAAAGTTTACTA
TCGTCCAAAAAGAAGGAGAAATCTTGATATTGATAAATGCATCTGATTGT
TGGGAAGATGTTGAAAGTATGAAGGTttataatgagaaagaaaaacgaTT
TCGATCATTTATGGTACCATATAGAGCGGTAGTAGAGCTTTCAATTCCAA
AGNACGATTTCGATCATTTATGGTACCATATAGAGCGGTAGTAGAGCCTT
CAATTCCAAAGTTGTCAAGCTCGATGTCTTTTAATAAGATGCAATAAATT
TCGAAGCTTGACCGTACCATGTATGATCGCGTAAAACGATTATGAAATAA
CGTTGAataaatagaccttatcggagtttttttttctaaaaaagcgatgc
attgtgggattgttttaagtgtattacaatataaatctctaggaattcct
cgagggaattctaatGTAATACActtgaaacaatcccacaatgcatcgct
tttttagaaaaatcaaaaactctgataaggtctATTAAGTAAAACTAACA
GAGAAAATTAAACTCGAAGAGCTTCGGTTCAAGAAAATTGTCGAGACATA
TACAGAATTCGAAAACGGCATCAACATTTGGAATAAAATTTCAtatgata
ttttggtttaataaattgtataaattGGAAATAGGTATTTTTGTAATTAT
AATTTGATGAAAGAAACATTATAAATTTCTAGAAAACTTTTTTGTACCAC
TCAGATATACCATTCCAACGAGATGTCTAATGTCGTAAggtattgttgga
aagataataaTATATGTCCCGCATAAATATATAAAACAAACCTTAAGTGG
GTTAATTTTGGCGGGATTAAAATTGGCGAATTtagtgattttcagaaaaa
ttcgCAAATATAAGTTCATTGGACCATTCGAGTTCTGAGgactgtattca
tgatatgcaccactggaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003439XLOC_003439Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006027-exon-sc0000062-1491911889:624461..624581TCONS_00006027-exon-sc0000062-1491911889:624461..624581Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1510915933:624461..624581TCONS_00006027-exon-sc0000062-1510915933:624461..624581Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1575043694:624461..624581TCONS_00006027-exon-sc0000062-1575043694:624461..624581Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1491911889:627908..628409TCONS_00006027-exon-sc0000062-1491911889:627908..628409Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1510915933:627908..628409TCONS_00006027-exon-sc0000062-1510915933:627908..628409Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1575043694:627908..628409TCONS_00006027-exon-sc0000062-1575043694:627908..628409Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1491911889:630349..630405TCONS_00006027-exon-sc0000062-1491911889:630349..630405Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1510915933:630349..630405TCONS_00006027-exon-sc0000062-1510915933:630349..630405Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1575043694:630349..630405TCONS_00006027-exon-sc0000062-1575043694:630349..630405Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1491911889:631076..631149TCONS_00006027-exon-sc0000062-1491911889:631076..631149Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1510915933:631076..631149TCONS_00006027-exon-sc0000062-1510915933:631076..631149Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1575043694:631076..631149TCONS_00006027-exon-sc0000062-1575043694:631076..631149Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1491911889:634597..635928TCONS_00006027-exon-sc0000062-1491911889:634597..635928Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1510915933:634597..635928TCONS_00006027-exon-sc0000062-1510915933:634597..635928Clytia hemisphaericaexon
TCONS_00006027-exon-sc0000062-1575043694:634597..635928TCONS_00006027-exon-sc0000062-1575043694:634597..635928Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:624461..635928 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.000281983	8.15532e-05	0.00019951	2.16232e-05	0	0.000205607	0.000186648	0	0	0	0	4.79942	1.26716	0	0	2.24575	0.869151	0	1.20016	0.212489	0.0704979	0	0	0	0.00163265
Blast
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BLAST of TCONS_00006027 vs. Swiss-Prot (Human)
Match: RASLC (Ras-like protein family member 12 OS=Homo sapiens GN=RASL12 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.406e-18
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 2 
Query:  578 EYNIVLLGDFGVGKTALAVRFVTRRYLHEYDPTLERTYEKQIQCSNGSAKVKLWDTVN----KSFDAYTEYADGFIVMYXXXXXXXXXXXXXXIKTIRASKYAAVRSVPILLLGTKCELEHARKVHAKEQEAFAKAHGCLWREISVAC 1009
            E N+ +LG  G GK+AL V+F+T+R++ EYDP LE TY  +    +    +++ DT +    ++ + Y  +A  F+V+YS  S Q+  ++ + ++ +        RS+P LLLG K ++   R+V   E  A A   GCL+ E+S AC
Sbjct:   20 EVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTADLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVS-AC 166
The following BLAST results are available for this feature:
BLAST of TCONS_00006027 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASLC1.406e-1834.46Ras-like protein family member 12 OS=Homo sapiens ... [more]
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