TCONS_00005999 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005999
Unique NameTCONS_00005999
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005999 ID=TCONS_00005999|Name=TCONS_00005999|organism=Clytia hemisphaerica|type=transcript|length=1426bp
CTAGTGTAACTTAGGCGCAATTTTCCATTGAAAAGCTGTAAAACGCTGGA
CCCAAACCAAAAAGAAGACCTATCAAAGCTTGTCAAATaggtatattatt
tttttcacctttagaGCAGCACTACAAATGAAAATGACAGAAGCTCCAGC
TAAAGTTGCCAAGCTAGACAACGAAAATAACAAGGAAGATGGAATGGGAG
ACAATGAACATCAAGATCTGGTAGAACAAATTGATTCAATACAAGGGCAA
ATAGATGGTCTAAATGAACAAGCATCAGAAGAAATATTACAAGTAgaaca
aaaatataataatttaagaaaacccttttttggaaaaagggCTGATTTGA
TAAAGAAAATACCAAAGTTTTGGGTCACAGTGTTTGTAAATCACCCTCAA
ATATCAGCGTTATTagatgaagaagatgaagaagcaCTACATTATCTACA
GTCTGTGGAAGttgaagaatttgaagataTCAAATCTGGATATAGAATAC
GATTTcacTTTTCAGATAATCCATACTTTGAAAATGACTTAATTTGTAAA
GAATTTATGCTCAGTGAAAATGGGGAACAGACTTGTAAATCAACTAATAT
TAGGTGGAAAGAAAATATGGATTTAACAACGAGGCAAGCAGAGACTGCAA
CTAAAGCTGGACAAAAACGACAACATGAAGAGCCAGAAAGCTTTTTCTCT
TGGTTCAACGATCAATCAGAAGTTGGTACAGATGAAGTAGGTGAACTGAT
AAAAGATGAGATTTGGCCGAACCCTTTACAATTTTTCTTGGGTGGAGGTA
ATGATACGGAGGAGGGAGAAGAGGATGATGAGAATGTTGTTTTGATCGAA
GACGAAGATGACGATGATGACGACGATGATGATGAGGAACCAGATGAAGG
TGAAGATGACGACGAAGAATTTGACGATGAAGAGggagatgaagatgaag
atggaGCGgaGGAGGAAGAAGGCAATGAATAAAGAAAGCATCTTATCTTA
ACAACCTGAACTGTTTGTCAGGCTTTTACGAACAAACTTACCAACGTACC
AAAGCAAGTTTCTGCGTATCGAAACGATGGAACCGGTTTATCGATAAAAT
GCTACCCagccaaaaacaccaaaacaattgtgtaaatattttaaacaagt
gTCTTTCTAATTACTACAAAATGAACAGTTAGCGTTTTTTGGCATGGCAT
GTGTATTATCGTTACCCCTTGGCGCTGTTTTAATCATATTATTTCGTCTG
GCATCATTATTCACCACGTTACAATGTTGATGGAATTTTTATCCTTTATT
AGTTTGTACTTAAAAAGTATCCTTTTATAATATTTGTGAAGCTGTGTAGG
GTCTCAATCTCAATTTTTTCTCCTGTCCATAATTTCATTTCCTTTTTTAT
GCAGTCCTTCGTTGGATTCTTGATcc
Run BLAST on NCBI

transcript from alignment at sc0000062:202245..213624+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005999 ID=TCONS_00005999|Name=TCONS_00005999|organism=Clytia hemisphaerica|type=transcript|length=11380bp|location=Sequence derived from alignment at sc0000062:202245..213624+ (Clytia hemisphaerica)
CTAGTGTAACTTAGGCGCAATTTTCCATTGAAAAGCTGTAAAACGCTGGA
CCCAAACCAAAAAGAAGACCTATCAAAGCTTGTCAAATaggtatattatt
tttttcacctttagaGCAGCACTACAAATGAAAATGACAGAAGCTCCAGC
TAAAGTTGCCAAGCTAGACAACGAAAATAACAAGGAAGATGGAATGGGAG
ACAATGAACATCAAGATCTGGTAGAACAAATTGATTCAATACAAGGGCAA
ATAGATGGTCTAAATGAACAAGCATCAGAAGAAATATTACAAGTAgaaca
aaaatataataatttaagaaaacccttttttggaaaaagggCTGATTTGA
TAAAGAAAATACCAAAGTTTTGGGTCACAGTGGTAtccttttcattttat
tttttagtataCTTTGCTGAGAATAAGTTTTGATTATATACTATTTAATG
ATGTAGCTAGCCTCCCAGTTTACAGAGATTTAGTGAGAAATTTTAAGTCC
TCTTAGTTCTGGATGTCTCCTGTTGTATATAAAAACTTTGTCTATACACT
ATACTGGAGATAATTTTGGAGTTTCTAAGCTTAGAAATGCGCCTTGGGTC
AGCATCATTTCTATTTGGAAGTGTGTCCCAGAGAACTGAATGAAGCAGAC
ATCATCAGTCAGGACCTCacttcactttatcgatattacgcaaacggcag
tgtgagCTAAATTATTTCGGTTTCGCtttcgatagaccttttttcaaaga
ggccaccctgttgaataattatgtagtccagcagaaaaacaatgataaaa
ttattacaatatgcatgatacagtaattatgaatggctctatcattgttt
ttatggctggactacatgattattcaacaggacgtcctctttgaaaaaag
gtctatttcaagcaaaggtcttagcaacagggcgcgcgtacatagcaacg
ggactgggggtagaaaaatctaaacatagaattcgaaaaaaataccgatc
atcgtatagagcactaaaaaataccccctttctatgtttagtttgttctN
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NNTATCTTGGGGGGGACCTGCATAATTTTATGTAACTCTGGGGGCTAAAT
AacacttcctaaatatttttctttactgtttttaatttctctaaaaaacC
TTTACGTCTTTGTGCGAAGTGTGATCTGATCCTTAGaagtgcacacacat
gtaaaAAGAGCTTTGGAAATCCTTGCAGGGTTCccagcggtcagggaaaa
cctggaaaaaggactgcttttagaaaaagtcagggaaaacctggaaaagt
cagggaatttttttccagaatgccttgaatttgatgatttttagccaatc
taggaATCTCCTCTTTTCATAANttaaatatgtcaatgtcgattcaacgc
ccgttaaagaaaataattcgtagatagttttttttacttgaaatttagaa
atacgaacaaaaaaagaatcaaatttaatatttgtttcctatctagatta
tattagcgttagaatacggtaaattttcatgaaaaaNATAATCATGATAA
TTGGCAGGGGAAAAGGTTGGATTTTTAaccaaaagtcagggaaaattaTT
CTTGGAAACTGCCTCTTGGCACTATTTCAAAGGGCAATTTTAAGAACTCA
AGGGTGCATAAGTTGTATAATGTTAAGTTACTACTAGTTTACTTTACTGT
TTATTTACTTGTGTTTTCATTGNacggtaaattttcatgaaaaatatttt
gcgatgggaaatcggggaaaccggggaaaccggttcaccacgtggataaa
aaacgtacggaatgaaacctgacagaaggttttcaaccagatttatttat
tcagataaagctataataggttcattacttgtggattttaaaacctacat
aaccaaaaatgaaagttgttgggaaggaaagagtaaacgcaagacagaaa
gtttggttgtgttgatcaggtatgtttttattctatccgaactaatgtta
aaaaagNAAAAAttcacattgaaaaaaaattactcatcaaaaatttttcc
cctattatactgggacctaaaattttatcaggctggggggaccttgttct
taggggggacctaaatttaccggggggacctagaaccccagtcggagcca
tgaATAATGACAAGTTGACActacaacacattgacaagtaatccctgtaA
GAGAAGTTTGAATCgtaatctgcaacaaaaacgaaagtggtttctTCTAC
TGATTATTTCCCGGCGTTCTTTCGCAGTTGTTAgtaaatttccaccaatg
agattgccgcATTTCAcatggcccttctttttggcacccgtggcctctca
gtgcttTGCACGGCGGACGGTGGCTGTAAAATCCTACCCTTCATACATTT
GCTTCAATCTTTGATCCAATGCTTAGGCAGTCAGGACCTCTtgggtcttt
tttaacattagttcggagagaataaaaacatacctgatcaacacaaccaa
accttctgtcttgcgttcactctttccttcccaacaactttcgtttttgc
ttatataggttttaaaatccacaagtaatgatgTAATGTAATGTACCGTG
GGtgcgattgggcgtaccgccatcgcgaaatatttttcgtgaaaatttat
cgTATtctctaacgctaatataatatagatacttacttacttttggttAC
TTTTGGTTGTCTTCGAGCTTCATGCTCTGGCAAGAAACTTTCTGCTTCAC
ACCACAATGCTGCATCCATCAAACCTGNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNTTCTTCATATCTCTAATACTCTTGGGCATTG
AATTGAATAACTTAGCACCTTGCACAACAAGCGTGCTATCATGTAGTTTT
GAACTATGGGTGCGAACACACATCTTCCCAATCTTGGGAGTTCcttgaat
tgaaatttattgTTGATGTTTGGAACCAGATTTTCAGCTATTTTCCATGT
ATACAGGATCCGATATCTctataggaaacaaatattaaatttgattcttt
tttgttcgtatttctaaaGTTTCAAGAACTatctacaaattattttcttt
aacaggcgttgaatcgacattgacatatttaatgatgtcataatcaatgc
cgtgcatattttgtcagcacagtgcatatttttcaacatccttttcattg
gacaaataccactaaaatatacaagataagttaacataaatttatcgccc
gcgagcacagCTTAGCTAAGCAAACCTCTCTTATTCCtcatctaagaatt
gaagcgggcaaagattaccgcacgggctgatagcggacgaaggttttttg
aagatattttcagttataatccaaggtagaacaaactaaacatagaaagg
gggtattttttagtgctctatatgacgatcggtattttttttgaattcta
tgtttagatttttctaccaaACCCCCGTTGCTATGtccgcgcgccctgtt
gctaagacctttgcttgaaatcgaaagcgaaaccaagattatttagcaCA
CACTGCCGTTTGTGTAATATCGATAAAATGAAATAAGGTCCTGACTGAGC
TTAGGTTTTtactcatcttcaatttactgaagaaagcaggaatttgatgt
gacagttagattgtcaacaagtcccgtaaaaaatcattgaataaaagaag
aacttaaaatcttaaatattttcattttgaagaataggtgtgCTTTCaac
aaaatctgcaacaaaaacaaaagtggtctcttctccTGATTCCTTCTTGG
TGCTCCTTCGCAGACTGTTTATTCAATTTCCACCAATAAGATTGCCACAT
TTTTTACGGTCCTTCTTTATGGTGGCCTGTGGCCTCTTAGTACCTTGTGT
AACTGGGAttgggatttggaaaattttctatgtttgtttttttgcacaaa
cccctatAACTATGGGCAAGTACCCTGTTGCTAGAaagttggcttgaaat
cgaaaaggAAAGTAAAATAAGCCCGCACTCCAAATCCGGTAATCTTGATa
tatataggagtttaagtctatactgactGATAGCGCAAGATAATACCACC
CTGGGATTGTCTGGTTTTCGCTAAAGATTatgtaattcaaaaacaaaacg
tcgattaaagcctgggatacacgggggcGAGGTTGCTGGGATTGTTGATG
ACCTTTTTCGCTTTTCCATCAGCCATCTTGGATtataccataagttggtc
taatatctaatatcccttgtctaattccgacaacccttctttagagacag
gaataatattaagtttgaattacggattgaaaaaggattattcctttctg
accactaagcaaagaataTTTTTACCTTTCTACCGGGTGagtcacaaaaa
agtttctttcttttaaggtctaaaaatttaaacataaccaatcctttttc
attggaaagaagaaagataaacttaattttgatgggtcattcataaaatt
ttattcattagttcaaaagttatgctcaatttaataaaaaagttactgAA
AAAAAAGCCTGTACATGTGTCTTGTTGTTAATACCTTCGCTTGAACTCGa
aagcaaaatcaaaatattttagcaCACGTGCACGTATTCTCAATAAAGTG
AAAGGAAATCCCGACTGAAGAAGAACTAAGAACACTAATGAAAGCAATAA
AAGttcataattcaaaaagaaatgcCTACAAAACACTAAAAAGCTTTTAT
AAATATGTTCTTAGAGAATAGCATTTCCTGTTTCAATGCCATTAAAAATT
TCACAACATTCATTTGAAGATTTGGTGCAAAACAGGGAAACattgaaaag
tttcatttttattggtTTAATTGAAATGGTGCCAATTTCAATATtcttat
gtgttttttttttacaatttacaCCTGTAATTATAGGCCTGCCAGGGCCT
GcatcctgaaaatgaaaattaaagtaaaattgTCTCACACTCCAAATTCA
GTAATCTGATAGTGATATAGGAGTTTTGATCTAAACTGAATTTGACATTC
CTACTTATCCCAGCTCTAAAGatgattagaccaacttacggtataaaCAC
CatctttatttgtttcaatcatATATTCTGAGGAGAGGGTtgtatttttc
ttatctttaacACTCAATCTGAGGAGAGGGTTGTATTTTTCTTATCTTCA
ACACTCAATCTTAAGCTGCAGGAATTTGATGTAAGAGTTAGATTGTTAAA
AAATCCTTTGTGATTTGCCCCAAAAATTAGAACAGGATAAGAAAAATTTG
AGGCTTAAAGTGTCAAAAAAAATAGGAACAGCCaagcctcaacaaaaatt
tgctggttctaataaaagaagagtgtaattttctaaaaaacgaaaacagc
taaaaattatttttgaaatggaAACAAAGCTGCTAAAGTGTTGGCTCAAA
ATCAAAGCTTTGCCATAAAGCCTGTAATCTCAATACAGTAATTATCAATG
GACTCCTACTAGACCTTCTTACCGTAACTTTGTGTTATGCCGACATACCT
TGTTTAATTCGGTCATATCAACTATCTGGTCTATAAAGTAgttaaagtaa
tttttttaaacagctcACTAGGAAGGTTTTATTTGTCATAAAGTATGGAC
AacttttgagattaaaaattccaaattttctGTTGGTGCAAATGATTTTG
CCATTGCTACTGCCTACCTTTTCCAATTAAAATCATACAAATGTGTGTAT
GTTTCAAAATAAACCAATTAAGATCAGAGAGAATGTCTCTTGGCTCTCTA
CTGTAAAATTCACAAACATGATTTAGCGTAGAAAGATTTTCTTTAACTGA
AATATCTCTCAAAATAGTTTGTAAATCACCCTCAAATATCAGCGTTATTa
gatgaagaagatgaagaagcaCTACATTATCTACAGTCTGTGGAAGttga
agaatttgaagataTCAAATCTGGATATAGAATACGATTTGTAAGACTTT
CACGTTTTTATCACGCAATACTGCTGTAAGGCTTTCTGAGGGCATTCTTT
GGTTTGCATGTTTTTAGTCTATTTGCTGGTCTGAAATGAAAAACTTCACT
TAGACCACTTTCAAACATCTAAAACGTTTTTATATTAATGAAGCAAATCT
TCATTTGACTActgttgatttctttttgatttctaaattttattttttag
cacTTTTCAGATAATCCATACTTTGAAAATGACTTAATTTGTAAAGAATT
TATGCTCAGTGAAAATGGGGAACAGACTTGTAAATCAACTAATATTAGGT
GGAAAGAAAATATGGTAAGTCGATTTTTTGTGCTAAAGTTCTTCACCTAC
CTTATGGACCAGGCTAATAATTAGTTAGGGAACAGCTTTGTCATCTAGGA
TCTTTCCTGACATACTTTGGAATCAAGTTTCTTTGACACAATTTTACATT
CAAGCTTGTATTTGTCTGAATAGAGTTTCTTTCtaattttgcaaaaagtt
tGCCAGAGGTTTTTAAAGGTTTGGGTAAGTATAgtcaaatgtgaaaaaaa
tcaaaagaaagttttacaTTACTGTGTCACATTCCCAATATAAACCATGT
TACCTTCAAAAGGTATTAAtgaatttctaaaaatcttaCAGGATTTAACA
ACGAGGCAAGCAGAGACTGCAACTAAAGCTGGACAAAAACGACAACATGA
AGAGCCAGAAAGCTTTTTCTCTTGGTTCAACGATCAATCAGAAGTTGGTA
CAGATGAAGTAGGTGAACTGATAAAAGATGAGATTTGGCCGAACCCTTTA
CAATTTTTCTTGGGTGGAGGTAATGATACGGAGGAGGGAGAAGAGGATGA
TGAGAATGTTGTTTTGATCGAAGACGAAGATGACGATGATGACGACGATG
ATGATGAGGAACCAGATGAAGGCGACTTTGAAGGTTTGTTTTGGCTCACA
AAATAAGATTGATTTCAACTTCACCATGACAGTAAACAGTCAACTCTACC
AAATTCATCAATGATGAGATGAAACATAAGAAGGGAACTTTACAATCCAC
aacatttcttgttgttttttatgataaaaaatagTGCCGTGAAAATCTCC
ATAGCAAATATAATAAGGAACTTTAAAATTTGTAATGACCTTCTTAAAGG
CTCTTTTCATTGACCATAACTTGAACCcctaaaaaattatttgaagatCA
AAGTCGAAAATTCAATTTCAcattataaaaattataatcTGGTCAATGAC
AGTTTAAGACTTTAAAGACAACAAGTAAGAAATGAATTATTTTGGTTGAT
AAACCGTATTTACATTTTCTCTCAGGTGAAGATGACGACGAAGAATTTGA
CGATGAAGAGggagatgaagatgaagatggaGCGGTAAAACCATTTTGTA
TTTCAATAAAGCTGAATTCCTGCAGTGGGTACAAAAATCTCAGAAATATG
AGTACTAAAATGGtttccaagaattttttgcACAACACAGTGCACTATAT
TATTTGGGAtattttgactcaaaaactAACCTGTTTTGGTCTAaaattca
acaacaaaaaatctgtttttgaaaaatcgaTACGTTTGATGATAACTTAA
CACAATTCATGAATTGAGCAAACATTAAGTTGATTGATTGCCAAAATAAT
TTGACTTTTGGTCTGAACTGGtctgaaaaagattcaaaaaatgataaaaa
tatttcattttaccacaaaaattttttgaaaatactaaTGTTTACCACCT
TTTCGATATTGTAGTACACTATGGtactaccgggtgcaccaaaaagaaag
tatacaggtttgtcgagatattgtgagcttcaggattttttgttcattct
ttttaaaTCGTCTAGAGGaagctctaacttgaattttgagctatcataca
ttttTAAtgtcagaatttcaaaaaatcatcaaaaacagcaatcacgctat
aaataagacaaatgacaaaaatattgttgttttgattctttttgcACCTA
CCTCCAGGTACcctttaaattaaattaaataaaattttcaataaaattca
tttttggagccggaactatttaaaaatcggcagaacaacctattttcgac
tgaaagacagtatttcttgaatttctcgagctgtactttatattttttta
tgaaattttgcacacttttgcaaaatgacaatacctaaaatgtgacggag
cccaattttcaaaagaacaatttttcggTCGAAAATACCAGAAATGtgcc
ggaaaaaccggcttttgacattttctcgaattttcatcattagttttttc
tgattttttgcagaaagatgcgtattcgcaacgctcaaaacatgaccgag
ttcgatttttgagaaatttattttttcggttgaaaatgccggaaatcgcc
gtgtttgcagattttcattggattttttccttgtatttctatgtttttta
cacaaaaacattattgataacaatgctcaccatcaagcatgattcaattg
tcaataaaactgatttttgcgaccagaactttccatttattttttcccta
caacccttccctctcccccatcaacaatcatcaacaaatgatgaatttat
tgcgttatgcattttcgctaaacgctatattttctgactgatttttttca
tttttcttctcgcattgctatctaacttttcatcatcaggtaggtccatt
cagcatctaacttgttttttcttatttatattttgcaAACAGTTTTTGca
tcttatttgcacgtcatgaaCATCTCCAACAcaagcaaactcaatgcagg
cCCAAGTTCTTTTTGAGGAATGGTTATCTATttgattttaaatgaatttt
atttctttttaggaGGAGGAAGAAGGCAATGAATAAAGAAAGCATCTTAT
CTTAACAACCTGAACTGTTTGTCAGGCTTTTACGAACAAACTTACCAACG
TACCAAAGCAAGTTTCTGCGTATCGAAACGATGGAACCGGTTTATCGATA
AAATGCTACCCagccaaaaacaccaaaacaattgtgtaaatattttaaac
aagtgTCTTTCTAATTACTACAAAATGAACAGTTAGCGTTTTTTGGCATG
GCATGTGTATTATCGTTACCCCTTGGCGCTGTTTTAATCATATTATTTCG
TCTGGCATCATTATTCACCACGTTACAATGTTGATGGAATTTTTATCCTT
TATTAGTTTGTACTTAAAAAGTATCCTTTTATAATATTTGTGAAGCTGTG
TAGGGTCTCAATCTCAATTTTTTCTCCTGTCCATAATTTCATTTCCTTTT
TTATGCAGTCCTTCGTTGGATTCTTGATcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003425XLOC_003425Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005999-exon-sc0000062-1491911889:202245..202626TCONS_00005999-exon-sc0000062-1491911889:202245..202626Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1510915933:202245..202626TCONS_00005999-exon-sc0000062-1510915933:202245..202626Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1575043694:202245..202626TCONS_00005999-exon-sc0000062-1575043694:202245..202626Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1491911889:210162..210284TCONS_00005999-exon-sc0000062-1491911889:210162..210284Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1510915933:210162..210284TCONS_00005999-exon-sc0000062-1510915933:210162..210284Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1575043694:210162..210284TCONS_00005999-exon-sc0000062-1575043694:210162..210284Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1491911889:210495..210608TCONS_00005999-exon-sc0000062-1491911889:210495..210608Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1510915933:210495..210608TCONS_00005999-exon-sc0000062-1510915933:210495..210608Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1575043694:210495..210608TCONS_00005999-exon-sc0000062-1575043694:210495..210608Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1491911889:210936..211215TCONS_00005999-exon-sc0000062-1491911889:210936..211215Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1510915933:210936..211215TCONS_00005999-exon-sc0000062-1510915933:210936..211215Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1575043694:210936..211215TCONS_00005999-exon-sc0000062-1575043694:210936..211215Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1491911889:211620..211678TCONS_00005999-exon-sc0000062-1491911889:211620..211678Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1510915933:211620..211678TCONS_00005999-exon-sc0000062-1510915933:211620..211678Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1575043694:211620..211678TCONS_00005999-exon-sc0000062-1575043694:211620..211678Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1491911889:213157..213624TCONS_00005999-exon-sc0000062-1491911889:213157..213624Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1510915933:213157..213624TCONS_00005999-exon-sc0000062-1510915933:213157..213624Clytia hemisphaericaexon
TCONS_00005999-exon-sc0000062-1575043694:213157..213624TCONS_00005999-exon-sc0000062-1575043694:213157..213624Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:202245..213624 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
133.526	122.262	315.884	357.887	535.13	437.754	234.505	265.273	80.8121	78.817	67.0744	62.8	32.3129	45.0719	51.3072	61.4551	81.8603	70.8887	13.2201	8.84017	61.8734	52.7484	72.0557	68.5084	87.5405	110.098	45.3884	29.5776	50.3589	45.3922
Blast
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BLAST of TCONS_00005999 vs. Swiss-Prot (Human)
Match: SET (Protein SET OS=Homo sapiens GN=SET PE=1 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 6.666e-86
Identity = 133/198 (67.17%), Postives = 162/198 (81.82%), Query Frame = 2 
Query:  197 GDNEHQDLVEQIDSIQGQIDGLNEQASEEILQVEQKYNNLRKPFFGKRADLIKKIPKFWVTVFVNHPQISXXXXXXXXXXXHYLQSVEVEEFEDIKSGYRIRFHFSDNPYFENDLICKEFMLSENGEQTCKSTNIRWKENMDLTTRQAETATKAGQKRQHEEPESFFSWFNDQSEVGTDEVGELIKDEIWPNPLQFFL 790
            G+ E Q+ +E ID +Q +ID LNEQASEEIL+VEQKYN LR+PFF KR++LI KIP FWVT FVNHPQ+SALL EEDEEALHYL  VEV EFEDIKSGYRI F+F +NPYFEN ++ KEF L+E+G+ + KST I+WK   DLT R ++T  KA +KRQHEEPESFF+WF D S+ G DE+GE+IKD+IWPNPLQ++L
Sbjct:   37 GEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYL 234
The following BLAST results are available for this feature:
BLAST of TCONS_00005999 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SET6.666e-8667.17Protein SET OS=Homo sapiens GN=SET PE=1 SV=3[more]
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