TCONS_00005918 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005918
Unique NameTCONS_00005918
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1872

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005918 ID=TCONS_00005918|Name=TCONS_00005918|organism=Clytia hemisphaerica|type=transcript|length=1872bp
CAACAACCACACCGACTACTTCAACAACAACAACAGCAACAACGACGACT
ACAACGACCACAACAGAAGAAACAACGACCATGTCTCTCCCTCCACCACC
AGCAATAAAGGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTC
AAGGTGTTGGTACTTGCGGAGAATGTTGTCCTGGTCAACAAATTTATTTG
AACCTATTCTTCCCGGGTGGTAATggtaaaAATTACGTGATGCAAGGTAC
TCAACAATTAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAA
ATGATGAAGCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTAC
GATAAAACGAAAATTATGAATTTGATTAGGAGCAAATTGCCGAACGGCAA
TGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCACCAGA
GTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAAGAAAT
AGGAGGGACATTGGATTGGAAAAGCATCAACAGAATATGATGTCACTAGC
TGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATacggaa
ttttcgacaatttACATGAAGTGCAACgtattatgaaaacaaaaatcacA
GTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACCAATAA
GGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGTGGTAC
GACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGAGATCA
AAAATCATCATTCAAAAGCATTTCGAAAATAAAGCTGAAATGGTAAACAA
TGCTAAAATCATCGTTTCAATCAAATTACCGCAATCTCTTGAATTGACCA
TCATTGATTCCATGATTGACACCCCTATCCAGTCCGTTATGGATGTGCTA
AGATCGACACCATCATTATCAACAATGTATGAGATCATCAAAGGTTCACA
CCTCAAGAAAATTCTCAAAGGAGCTCAACGACCCACTGAGATTTGTTTTC
ATAAGAAGCTTTGTATTGGAATCTCAAAAGACCTGGCAAATCATTTCCAA
GAACTTGCCAGCTTCAAGCAATTTACAttccaatttttggaaaacGATAT
CttcaaaacaccaaaaatcatGCCGAAGCATTACCGTAAAAAATTTATGA
CTTCATCAAAAGCACGAAACACCTTTGTGGAGCAACACGTGTTTCTAGGT
ATCCATGACAACGAAAAATTAACCAATGAGAGCAAAGAACGCATGCTTGG
TTTAACAATGAACAGTAAGCACCCCATTGTTGAATTCCTCCAATCAGAAG
GAGGTAGACACGTGACAAGAAATGGCGCGCATGCGTTTAGAATTCGTAAA
ATGATTCGCGTGAAGGAAGGATTGGTTCAAATCCTATCACCTCTTGATTA
GAAGATTCTTTGGAATACATTTGAAGTATATTTAAACTGACTAGAAATTT
CTATACTAAAATACTTCAGaatttttatgtgaaaaaatattgaaaacctT
TTGTGTTTTGGAGGAACGAGAACAAATCCTCGATTGCCAAAGATGGATTG
TGCCATGCGTACAAATCTGGCAGATACAAATCATTCAATATGCTATGTAA
ATAAACGCAGACAAAATGGCAGTCGTCGGATTCGTGAATACAATCAAtat
cacttttaaattttgacaaaatttgcgGGATTTTATTGAACCTctttttt
cgtgaaaatttgaCTGGGTATCAAATTTGATTAATGGAATAATAGTCAAA
ATATAGAGACGGTAGAATTGTAATCAAAATTTAGCAATCTAAAGAAAGAT
AAGAATGAATGTCCAGAAAAGC
Run BLAST on NCBI

protein sequence of TCONS_00005918-protein

>TCONS_00005918-protein ID=TCONS_00005918-protein|Name=TCONS_00005918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=482bp
TTTPTTSTTTTATTTTTTTTTEETTTMSLPPPPAIKESTPCPTKAKPKCQ
GVGTCGECCPGQQIYLNLFFPGGNGKNYVMQGTQQLARTKDGKATIVLEN
DEAANNNGGSVVNGDYDKTKIMNLIRSKLPNGNEVLFNSIEEIISSYHQS
KNGDEGDSNIPVNRRNRRDIGLEKHQQNMMSLAEKLGCKEFMHDLQKYGI
FDNLHEVQRIMKTKITVLCPVDQQYKAFKKTNKAEDRKAIVQILLDHVVR
RMGTNGNLLHSISTRSKIIIQKHFENKAEMVNNAKIIVSIKLPQSLELTI
IDSMIDTPIQSVMDVLRSTPSLSTMYEIIKGSHLKKILKGAQRPTEICFH
KKLCIGISKDLANHFQELASFKQFTFQFLENDIFKTPKIMPKHYRKKFMT
SSKARNTFVEQHVFLGIHDNEKLTNESKERMLGLTMNSKHPIVEFLQSEG
GRHVTRNGAHAFRIRKMIRVKEGLVQILSPLD
Run BLAST on NCBI

transcript from alignment at sc0000061:407226..412665-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005918 ID=TCONS_00005918|Name=TCONS_00005918|organism=Clytia hemisphaerica|type=transcript|length=5440bp|location=Sequence derived from alignment at sc0000061:407226..412665- (Clytia hemisphaerica)
CAACAACCACACCGACTACTTCAACAACAAGTAAGTAATATTTTTCATAA
GAATTTTGCCCAAATTTGGTAGGGCCAGATTTACGTAGAAATGATTAAAG
TGTTAAGGAGTCTTTAAAAGTGGAAATTTTTCAATTTTCCAAAATATAGA
TATTAACACTTGAATATTTTTGCTGTTTTCGGTCATGTTTGTCCATTTTA
GGCCTACTTCAAAGGGCTGTAACTTTTTATCCAAGAAAGATATGAAAAAT
TTGAATACATACTTGAATTTAGCAAGGTTTAAATTTTTTAAATAGTCTGA
TGTCATCGTTTTTATTTTTAGTACAGTAGAGAAAATCATTTTTTTCATCT
TCGTTTTATTTCTTCATTTTTCAATTTTTCAAAAATCTTTTATCCTTTAT
TTTCCTTGGAAATATCTTGAATGTAAATTTTCTAACGTAGCATGAATAGG
TGCTGGGAAAAGGTCAAAAAACTAAAATGTCCACATAGTTGTGAGACAGA
CTCAAAGTCCCTGGAAATCGGAAATTTATCAATTAATTCAAAATTGTCTT
TTTCTATATATAGCAACAGCAACAACGACGACTACAACGACCACAACAGA
AGAAACAACGACCATGTCTCTCCCTCCACCACCAGGTAAAATAAGCCTCA
GGTTCTTCTTTTTAAAAAACCCCTAATCAGACTTTTACAATCAGTGATAT
TTGATATCATATTGAAACAAGAAAATTTGCCGCGAGATTTTCCCCCGAAC
GTTATCTTTGAGGCATCTTCTTAATAGACCCGGTAGGATTTTTTTCAGCT
AGTAGGGGTAAAAATGACGGACTGAAAGTCGATGGAGATTTATATTCCCA
TGTTTTTATGGCTTGGGATTTGAATTTTATTGTTTTCAGAAAATTCAAAG
TGAATGGAAAAAATAACGCAATATTTTGCATTGGGGATTCTTTTATTTAA
TTATTTTAATGGAATTTTACAAACGCATTTCGGTAAAAGAGTGATACCTT
AGAGGAGACTGTCTACATAACCCCAAATGTTAAAAATTCATTAGGTTGTT
CTAAACAATTCCTATACAGCGGAGGGTGGACGAACCTTTTCAAGTCAAAG
CAAATTTCCTGGAAATGTGTGGATACCCTGGAAAATTGCAAAATTTGCAA
AAACACCCTGGAAAAAATTATTTTCATGTCTTATTTAAAGTGAGGTTGGA
CGGACTAATGTCAGTTGACCCCTGGAAGTTTAAAAATATCTTTTTACCGC
CTAGAAAAATCAAAAAATATGCTTCTTTAAGACCTCCTTGGAAAAGTGCG
TCCAGCCCCCTGTATGGTTGTAAAGTGGGATGGCTGACCCCACGAAACGT
GTAAGGTAAACAAGATAACAAAAAATAATGAAAAGAAAATAAAGTTTCAA
TTTTTTTTTTCGCAGCAATAAAGGAAAGTACACCATGCCCAACTAAAGCT
AAGCCAAAATGTCAAGGTATAAATATTTAATCCATCTTCGTAATAGACTG
CTCTCAGTTTTTATGCCTTACTTTTGGTCTATAGTCAGTACTATAAGCGG
CCAATAGCGACGCCCACTGAGGGTTTGAATACACTTTATAGACATTATAC
ACACTAAATGGAGGAAGATTTGACGTAGCCTATGCATGAAAATGTTTTAA
TATTTTTAAATATTCTAATATCAATTTTAATATTTTCTACATTTTCTTTA
CAGGTGTTGGTACTTGCGGAGAATGTTGTCCTGGTCAACAAATTTATTTG
AACCTATTCTTCCCGGGTGGTAATGTAAGTTTATAACTCTTGTATCAGAC
ACTTAAAGGCTTGTAAAATTGCGTCAGAACATGACCGTAACATAGTCGTA
ATAAGATATTCGGTTATGATGGCCTCGGTCCGAAAATAAAGCCCCACTCT
TCACCCTGTGAGCATCTTTTTACTAGGGAAAGCATCCCTTAAAAATCTCA
AGATTGACAAGTGCTATGACCTCGAAATTTTGAAAATCCTCTTTGCCCTC
CCCCAAGGTGCTCGAAGTGTTAAGGGGAAGGGAGGTGTTGGGGAAACCCA
AAAAACAATTCTCTGACGAGTGTGAACTTTCTCCATGTTTAATGAATCGA
GTCTAAAAAATAAATGTTTAAGACCAACACAGTGTGTAGTCACTTTTTCA
TGATACGATTCAGTTGCTCCACTATAAGGAAAAATTCTAACCGATTCTCT
TGTAGCCTTCATAAAAATACGTTCAAAAATATATTGTTATGAAATTTCAG
GGTAAAAATTACGTGATGCAAGGTACTCAACAATTAGCCAGAACTAAGGA
TGGTAAAGCAACGATAGTGCTAGAAAATGATGAAGCCGCAAACAATAATG
GTGGATCAGTTGTGAATGGAGATTACGATAAAACGAAAATTATGAATTTG
ATTAGGGTGAGTTTTCCAGATTCATAGAGTTTTGAGTGGGCTGTACTAAC
GCACTTTGTAATAAACGCCACACTTTGTAATACCTAACGCCACACTTTGT
AATACACCTTGACGCACTTTGTAATACCTAACGCACTTTGTAATACCTAA
CGCACTTTGTAATACCTAACGCACTTTGTAATACCTAACGCACTTTGTAA
TACCTAACGCCACACTTTGTAATACCTAACGCCACACTTTGTAATACCTA
ACGCACTTTGTTATAACATCTGGGCGCGTTGGTAGATTTTCAAAATGAAA
GAAATCACTATTCAAGGCAACACAACGCTCATCTCCAACCCAATGAAATT
TAGTGTCTGGGAAAAGCAAAAATCTTTCTATGAAGCTAACCTTAAATTAG
TAAATTAACCCTCTTTTCTTAGCTTGAAAGGCTAAGCCTTCATGCAAAAA
ATCAGCTACATAAGAAATATTTGTAGTTTTCTGGGACACAATTCTTGATA
TTGGCCCTACCATGATTTATAGCATCAAAATAAGGTCGTTTGGATGTCGA
GAAACGACGTTATATACCATTATATGAGAACCTTTTTATTTCAATTATTT
ATTCCTTAAGAAGCATACTCACAGAGTTCTTTTGTCCGAAGTATGGTGAT
AAATTCTAATCCAATTTGATATTTTAGAGCAAATTGCCGAACGGCAATGA
AGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCACCAGAGTA
AAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAAGAAATAGG
AGGGACATTGGTAAGAGTTTTTTTCAAGGCCGTATTCTTGGGTGGAAGGT
CAGAAAGGTCTTTGCGACCCCCAAGATCAAATGTGATCATTAAAAAAATT
AACGATTGTATGGTACGACTTTATACAACTTAACCTTTGTGTGCTTACGG
TTATCGTACTCATTTTAGAGCCACAATTGCAATTTGAAGTTTGATTTTTA
TCAAAACAAATTCCATGTTCAAAAGCAACAGACAAAAATCGACAGAGCCT
TAGTAGCCATGTACTAGCATGAATCAAAACTGAAGTATGAGTTTTTGATA
AAATGTGTTTCTTTAGGATTGGAAAAGCATCAACAGAATATGATGTCACT
AGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATACG
GAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAAATC
ACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACCAA
TAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGTGG
TACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGAGA
TCAAAAATCATCATTCAAAAGCATTTCGAAAATGTAAGTGATTTTTCTTT
TTTTTTCCATCATGGCCAATCGTGTTCTAATAATTTCTATTTCAGCAGCA
TTTCCAGTGCACAAAAAAACAAAAATTTAAAAACGCGTATATCCTACAAT
CAGTGACAAAATACTTGGCACAAAAGGGAAATTCACCGGGGTGTTTCGAA
ACCACAATCGATTTATAAGTGCCTAAAGTAGGTTGGAAGGGTAGAGTTTT
AACTCTGAGTTTTAACAAGAAACTTCAGACTTAGGACCTTAGGATCTGAG
GATCCAAAAGTTCAAAAATGGTCCAGTAGCGCTTGAAGTATAGTCTAGAA
ACCAATAAATTCCTCCCAGATCGAAATAATCGATGAAATCAAGTTGAGGA
CCTGAAATTGACACTCTCGCTCGAACTTCAATTTTCGAAAAATGGTAAAT
TAGCCAAAAGTGCAAATATATTATGGCACGGATTGTAGCTAAAATACTTT
ATTTTATTTTATTTCACAGAAAGCTGAAATGGTAAACAATGCTAAAATCA
TCGTTTCAATCAAATTACCGCAATCTCTTGAATTGACCATCATTGATTCC
ATGATTGACACCCCTATCCAGTCCGTTATGGATGTGCTAAGATCGACACC
ATCATTATCAACAATGTATGAGATCATCAAAGGTTCACACCTCAAGAAAA
TTCTCAAAGGAGCTCAACGACCCACTGAGATTTGTTTTCATAAGAAGCTT
TGTATTGGAATCTCAAAAGACCTGGCAAATCATTTCCAAGAACTTGCCAG
CTTCAAGCAATTTACATTCCAATTTTTGGAAAACGATATCTTCAAAACAC
CAAAAATCATGCCGAAGCATTACCGTAAAAAATTTATGACTTCATCAAAA
GCACGAAACACCTTTGTGGAGCAACACGTGTTTCTAGGTATCCATGACAA
CGAAAAATTAACCAATGAGAGCAAAGAACGCATGCTTGGTTTAACAATGA
ACAGTAAGCACCCCATTGTTGAATTCCTCCAATCAGAAGGAGGTAGACAC
GTGACAAGAAATGGCGCGCATGCGTTTAGAATTCGTAAAATGATTCGCGT
GAAGGAAGGATTGGTTCAAATCCTATCACCTCTTGATTAGAAGATTCTTT
GGAATACATTNTCGTAAAATGATTCGTGTGAAGGAAGGATTGGTTCAAAT
CCTATCACCTCTTGATTAGAAGATTCTTTGGAATACATTTGAAGTATATT
TAAACTGACTAGAAATTTCTATACTAAAATACTTCAGAATTTTTATGTGA
AAAAATATTGAAAACCTTTTGTGTTTTGGAGGAACGAGAACAAATCCTCG
ATTGCCAAAGATGGATTGTGCCATGCGTACAAATCTGGCAGATACAAATC
ATTCAATATGCTATGTAAATAAACGCAGACAAAATGGCAGTCGTCGGATT
CGTGAATACAATCAATATCACTTTTAAATTTTGACAAAATTTGCGGGATT
TTATTGAACCTCTTTTTTCGTGAAAATTTGACTGGGTATCAAATTTGATT
AATGGAATAATAGTCAAAATATAGAGACGGTAGAATTGTAATCAAAATTT
AGCAATCTAAAGAAAGATAAGAATGAATGTCCAGAAAAGC

Coding sequence (CDS) from alignment at sc0000061:407226..412665-

>TCONS_00005918 ID=TCONS_00005918|Name=TCONS_00005918|organism=Clytia hemisphaerica|type=CDS|length=11592bp|location=Sequence derived from alignment at sc0000061:407226..412665- (Clytia hemisphaerica)
AAAGCTGAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACC
GCAATCTCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCC
AGTCCGTTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTAT
GAGATCATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACG
ACCCACTGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAG
ACCTGGCAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTC
CAATTTTTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCA
TTACCGTAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGG
AGCAACACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAG
AGCAAAGAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGT
TGAATTCCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGC
ATGCGTTTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAA
ATCCTATCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATG
TCACTAGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAA
ATACGGAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAA
AAATCACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAA
ACCAATAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCA
CGTGGTACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGA
CGAGATCAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCG
AACGGCAATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTA
TCACCAGAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATC
GAAGAAATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCA
ACAATTAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATG
ATGAAGCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGAT
AAAACGAAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGT
TGTCCTGGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCA
ATAAAGGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGC
AACAGCAACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCA
TGTCTCTCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAA
AAGCTGAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCG
CAATCTCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCA
GTCCGTTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATG
AGATCATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGA
CCCACTGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGA
CCTGGCAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCC
AATTTTTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCAT
TACCGTAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGA
GCAACACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGA
GCAAAGAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTT
GAATTCCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCA
TGCGTTTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAA
TCCTATCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGT
CACTAGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAA
TACGGAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAA
AATCACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAA
CCAATAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCAC
GTGGTACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGAC
GAGATCAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGA
ACGGCAATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTAT
CACCAGAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCG
AAGAAATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAA
CAATTAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGA
TGAAGCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATA
AAACGAAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTT
GTCCTGGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAA
TAAAGGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCA
ACAGCAACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCAT
GTCTCTCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAAA
AGCTGAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCGC
AATCTCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCAG
TCCGTTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATGA
GATCATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGAC
CCACTGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGAC
CTGGCAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCCA
ATTTTTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCATT
ACCGTAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGAG
CAACACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGAG
CAAAGAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTTG
AATTCCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCAT
GCGTTTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAAT
CCTATCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGTC
ACTAGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAAT
ACGGAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAA
ATCACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAAC
CAATAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACG
TGGTACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACG
AGATCAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGAA
CGGCAATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATC
ACCAGAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGA
AGAAATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAAC
AATTAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGAT
GAAGCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATAA
AACGAAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTTG
TCCTGGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAAT
AAAGGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCAA
CAGCAACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCATG
TCTCTCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAAAA
GCTGAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCGCA
ATCTCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCAGT
CCGTTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATGAG
ATCATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGACC
CACTGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGACC
TGGCAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCCAA
TTTTTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCATTA
CCGTAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGAGC
AACACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGAGC
AAAGAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTTGA
ATTCCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCATG
CGTTTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAATC
CTATCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGTCA
CTAGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATA
CGGAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAAA
TCACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACC
AATAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGT
GGTACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGA
GATCAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGAAC
GGCAATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCA
CCAGAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAA
GAAATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAACA
ATTAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGATG
AAGCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATAAA
ACGAAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTTGT
CCTGGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAATA
AAGGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCAAC
AGCAACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCATGT
CTCTCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAAAAG
CTGAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCGCAA
TCTCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCAGTC
CGTTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATGAGA
TCATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGACCC
ACTGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGACCT
GGCAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCCAAT
TTTTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCATTAC
CGTAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGAGCA
ACACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGAGCA
AAGAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTTGAA
TTCCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCATGC
GTTTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAATCC
TATCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGTCAC
TAGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATAC
GGAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAAAT
CACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACCA
ATAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGTG
GTACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGAG
ATCAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGAACG
GCAATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCAC
CAGAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAAG
AAATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAACAA
TTAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGATGA
AGCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATAAAA
CGAAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTTGTC
CTGGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAATAA
AGGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCAACA
GCAACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCATGTC
TCTCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAAAAGC
TGAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCGCAAT
CTCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCAGTCC
GTTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATGAGAT
CATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGACCCA
CTGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGACCTG
GCAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCCAATT
TTTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCATTACC
GTAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGAGCAA
CACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGAGCAA
AGAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTTGAAT
TCCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCATGCG
TTTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAATCCT
ATCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGTCACT
AGCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATACG
GAATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAAATC
ACAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACCAA
TAAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGTGG
TACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGAGA
TCAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGAACGG
CAATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCACC
AGAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAAGA
AATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAACAAT
TAGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGATGAA
GCCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATAAAAC
GAAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTTGTCC
TGGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAATAAA
GGAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCAACAG
CAACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCATGTCT
CTCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAAAAGCT
GAAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCGCAATC
TCTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCAGTCCG
TTATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATGAGATC
ATCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGACCCAC
TGAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGACCTGG
CAAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCCAATTT
TTGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCATTACCG
TAAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGAGCAAC
ACGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGAGCAAA
GAACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTTGAATT
CCTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCATGCGT
TTAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAATCCTA
TCACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGTCACTA
GCTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATACGG
AATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAAATCA
CAGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACCAAT
AAGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGTGGT
ACGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGAGAT
CAAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGAACGGC
AATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCACCA
GAGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAAGAA
ATAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAACAATT
AGCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGATGAAG
CCGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATAAAACG
AAAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTTGTCCT
GGTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAATAAAG
GAAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCAACAGC
AACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCATGTCTC
TCCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAAAAAGCTG
AAATGGTAAACAATGCTAAAATCATCGTTTCAATCAAATTACCGCAATCT
CTTGAATTGACCATCATTGATTCCATGATTGACACCCCTATCCAGTCCGT
TATGGATGTGCTAAGATCGACACCATCATTATCAACAATGTATGAGATCA
TCAAAGGTTCACACCTCAAGAAAATTCTCAAAGGAGCTCAACGACCCACT
GAGATTTGTTTTCATAAGAAGCTTTGTATTGGAATCTCAAAAGACCTGGC
AAATCATTTCCAAGAACTTGCCAGCTTCAAGCAATTTACATTCCAATTTT
TGGAAAACGATATCTTCAAAACACCAAAAATCATGCCGAAGCATTACCGT
AAAAAATTTATGACTTCATCAAAAGCACGAAACACCTTTGTGGAGCAACA
CGTGTTTCTAGGTATCCATGACAACGAAAAATTAACCAATGAGAGCAAAG
AACGCATGCTTGGTTTAACAATGAACAGTAAGCACCCCATTGTTGAATTC
CTCCAATCAGAAGGAGGTAGACACGTGACAAGAAATGGCGCGCATGCGTT
TAGAATTCGTAAAATGATTCGCGTGAAGGAAGGATTGGTTCAAATCCTAT
CACCTCTTGATTAGGATTGGAAAAGCATCAACAGAATATGATGTCACTAG
CTGAAAAACTTGGATGCAAAGAATTCATGCATGATCTTCAGAAATACGGA
ATTTTCGACAATTTACATGAAGTGCAACGTATTATGAAAACAAAAATCAC
AGTATTATGTCCTGTTGATCAACAATACAAGGCTTTCAAGAAAACCAATA
AGGCCGAGGATCGAAAAGCAATTGTTCAAATCCTCCTTGATCACGTGGTA
CGACGTATGGGAACAAATGGCAATCTACTGCATTCGATTTCGACGAGATC
AAAAATCATCATTCAAAAGCATTTCGAAAATAGCAAATTGCCGAACGGCA
ATGAAGTCTTGTTCAATTCAATCGAAGAAATTATTTCAAGTTATCACCAG
AGTAAAAATGGTGATGAGGGAGATAGTAATATCCCAGTAAATCGAAGAAA
TAGGAGGGACATTGGGTAAAAATTACGTGATGCAAGGTACTCAACAATTA
GCCAGAACTAAGGATGGTAAAGCAACGATAGTGCTAGAAAATGATGAAGC
CGCAAACAATAATGGTGGATCAGTTGTGAATGGAGATTACGATAAAACGA
AAATTATGAATTTGATTAGGGTGTTGGTACTTGCGGAGAATGTTGTCCTG
GTCAACAAATTTATTTGAACCTATTCTTCCCGGGTGGTAATCAATAAAGG
AAAGTACACCATGCCCAACTAAAGCTAAGCCAAAATGTCAAGCAACAGCA
ACAACGACGACTACAACGACCACAACAGAAGAAACAACGACCATGTCTCT
CCCTCCACCACCAGACAACCACACCGACTACTTCAACAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003369XLOC_003369Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005918-exon-sc0000061-1575043694:412636..412665TCONS_00005918-exon-sc0000061-1575043694:412636..412665Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:412031..412102TCONS_00005918-exon-sc0000061-1575043694:412031..412102Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:411200..411250TCONS_00005918-exon-sc0000061-1575043694:411200..411250Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:410892..410962TCONS_00005918-exon-sc0000061-1575043694:410892..410962Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:410260..410415TCONS_00005918-exon-sc0000061-1575043694:410260..410415Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:409456..409588TCONS_00005918-exon-sc0000061-1575043694:409456..409588Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:408833..409149TCONS_00005918-exon-sc0000061-1575043694:408833..409149Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:407709..408346TCONS_00005918-exon-sc0000061-1575043694:407709..408346Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1575043694:407226..407629TCONS_00005918-exon-sc0000061-1575043694:407226..407629Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:412636..412665TCONS_00005918-exon-sc0000061-1510915933:412636..412665Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:412031..412102TCONS_00005918-exon-sc0000061-1510915933:412031..412102Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:411200..411250TCONS_00005918-exon-sc0000061-1510915933:411200..411250Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:410892..410962TCONS_00005918-exon-sc0000061-1510915933:410892..410962Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:410260..410415TCONS_00005918-exon-sc0000061-1510915933:410260..410415Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:409456..409588TCONS_00005918-exon-sc0000061-1510915933:409456..409588Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:408833..409149TCONS_00005918-exon-sc0000061-1510915933:408833..409149Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:407709..408346TCONS_00005918-exon-sc0000061-1510915933:407709..408346Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1510915933:407226..407629TCONS_00005918-exon-sc0000061-1510915933:407226..407629Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:412636..412665TCONS_00005918-exon-sc0000061-1491911889:412636..412665Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:412031..412102TCONS_00005918-exon-sc0000061-1491911889:412031..412102Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:411200..411250TCONS_00005918-exon-sc0000061-1491911889:411200..411250Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:410892..410962TCONS_00005918-exon-sc0000061-1491911889:410892..410962Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:410260..410415TCONS_00005918-exon-sc0000061-1491911889:410260..410415Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:409456..409588TCONS_00005918-exon-sc0000061-1491911889:409456..409588Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:408833..409149TCONS_00005918-exon-sc0000061-1491911889:408833..409149Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:407709..408346TCONS_00005918-exon-sc0000061-1491911889:407709..408346Clytia hemisphaericaexon
TCONS_00005918-exon-sc0000061-1491911889:407226..407629TCONS_00005918-exon-sc0000061-1491911889:407226..407629Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005918-proteinTCONS_00005918-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:407226..412665 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.172617	0.136404	1.34396	1.18116	0.341571	0.0890716	1.12392	0.198913	31.7818	27.9075	28.9401	47.2033	3.39519	5.26918	4.05937	6.31244	0.94882	1.05639	14.8721	19.7698	2.13016	2.24863	0.0585051	0.0312191	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005918 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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