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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005851 ID=TCONS_00005851|Name=TCONS_00005851|organism=Clytia hemisphaerica|type=transcript|length=795bp
ATTTGCTTCTATCTCCATGGAGCTGAAGAATCAAAAAGTAAGAATTTTAG
AATTCGCACATATAAATAGAGGTTTTCATTGTTGGACATCCAAATTACTG
ATTATCTTTTGCCTAGGTAAGTACCCTACTCAATCATGCtgcaaaatctt
ttataaagACCAATGGATTTTAGCTTTTCTGAACATTTTCAGTTTATTAT
TTTGCTGTTTGTTGCATTTTTGTGATTAACTCAAAGGTTTCAAACTAATA
TTATccattttgtgaaaattctgtaaatttttttctagaaattaaCCCTG
TGCAAATAATATTTCGGTTGGTTGAAAAATCTCCCTGTAAACTAAGACTG
TagatattgaaaattgattttagtatttgaggACTCGATTCGATTCGATT
GGTTTTCCAAGATGTTTCGTCTCAATTTGATTGTCGTAATTGTCATTTTT
GGAGTCATTCTCGGTCAGAGTGAAGGAACTTGCATTAAAGGACACGATTT
ACACGTTGAAACAGGTCAACACATCAGTCATAAGAATGTCATGTGCTGGG
TATGCAAAGACAATGGTGACCTTGACGTACTCCCTTTCAAAGATTGTGAG
AATGACCCTAACACTGTTGAATGGGTCTTCTAAGTCTTTGCTCTTTGTTA
TTATTTACCATTAAGTCTTATATTTACTTCGATATTATTTTTCCACCAAA
TGATAAAGATCTCTTATCAATTTTGTAATTAAATGCGATATTTATATGTA
AACAagtattattttgaataaacacGTAATGTTATTCTCGGGATT Run BLAST on NCBI transcript from alignment at sc0000061:460369..461594+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005851 ID=TCONS_00005851|Name=TCONS_00005851|organism=Clytia hemisphaerica|type=transcript|length=1226bp|location=Sequence derived from alignment at sc0000061:460369..461594+ (Clytia hemisphaerica)
ATTTGCTTCTATCTCCATGGAGCTGAAGAATCAAAAAGTAAGAATTTTAG
AATTCGCACATATAAATAGAGGTTTTCATTGTTGGACATCCAAATTACTG
ATTATCTTTTGCCTAGGTAAGTACCCTACTCAATCATGCtgcaaaatctt
ttataaagACCAATGGATTTTAGCTTTTCTGAACATTTTCAGTTTATTAT
TTTGCTGTTTGTTGCATTTTTGTGATTAACTCAAAGGTTTCAAACTAATA
TTATccattttgtgaaaattctgtaaatttttttctagaaattaaCCCTG
TGCAAATAATATTTCGGTTGGTTGAAAAATCTCCCTGTAAACTAAGACTG
TagatattgaaaattgattttagtatttgaggACTCGATTCGATTCGATT
GGTTTTCCAAGATGTTTCGTCTCAATTTGATTGTCGTAATTGTCATTTTT
GGAGTCATTCTCGGTCAGAGTGAAGGAACTTGCATTAAAGGTGAGTGTAA
TAAGAATAAtgactttataagaacatgcgtttgaaatttgatcaaaacat
ACATAAGAACAAATTTAGAACAATCCAGGCCTTTCAgaaatcacgcaatt
tttttcaagCACAGCCCAGCCCGGCCCAAATTTTCCGATATTTCCTTTTT
TAGCAGCTCTAAAGGAATCAAAACGGGCATATTCAGTGTTTCCACGATTT
CATGTCAGGCACAACGGTGTGTACTAACTTTTTCTTGGTAGAGATAAAGT
GAGCACAAAGTTATCCCGTAACTTGTCCCTGAGAAAGATCCCAAGAAAAT
GATAGAAATCACTAGAAAAAGACTCACACAGGAAAGGAAAAAGTCCACGA
TGGCATACATGTTTGTGGTGTACTAGGGTATGGAATTCCATGTGTATTCT
TTATTCTGTATTATATTTCAGGACACGATTTACACGTTGAAACAGGTCAA
CACATCAGTCATAAGAATGTCATGTGCTGGGTATGCAAAGACAATGGTGA
CCTTGACGTACTCCCTTTCAAAGATTGTGAGAATGACCCTAACACTGTTG
AATGGGTCTTCTAAGTCTTTGCTCTTTGTTATTATTTACCATTAAGTCTT
ATATTTACTTCGATATTATTTTTCCACCAAATGATAAAGATCTCTTATCA
ATTTTGTAATTAAATGCGATATTTATATGTAAACAagtattattttgaat
aaacacGTAATGTTATTCTCGGGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005851-exon-sc0000061-1491911889:460369..460858 | TCONS_00005851-exon-sc0000061-1491911889:460369..460858 | Clytia hemisphaerica | exon |
| TCONS_00005851-exon-sc0000061-1510915933:460369..460858 | TCONS_00005851-exon-sc0000061-1510915933:460369..460858 | Clytia hemisphaerica | exon |
| TCONS_00005851-exon-sc0000061-1575043694:460369..460858 | TCONS_00005851-exon-sc0000061-1575043694:460369..460858 | Clytia hemisphaerica | exon |
| TCONS_00005851-exon-sc0000061-1491911889:461290..461594 | TCONS_00005851-exon-sc0000061-1491911889:461290..461594 | Clytia hemisphaerica | exon |
| TCONS_00005851-exon-sc0000061-1510915933:461290..461594 | TCONS_00005851-exon-sc0000061-1510915933:461290..461594 | Clytia hemisphaerica | exon |
| TCONS_00005851-exon-sc0000061-1575043694:461290..461594 | TCONS_00005851-exon-sc0000061-1575043694:461290..461594 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:460369..461594 + |
Blast
The following BLAST results are available for this feature:
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