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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005849 ID=TCONS_00005849|Name=TCONS_00005849|organism=Clytia hemisphaerica|type=transcript|length=507bp
AAAAGATTTCCATGGTTGGACAGCCCATGATATTTTTCTAATCAAAACCC
TCTAATTAGCTCAAACAGAGTATGTTACTAATCCAAAAAAAGGCAGAAAA
AGAGATCGTTCCAACCACCTATAAAAGTGTAAATTTATTGGTAGTCTATC
TTCATTctacaattttgaaaacaagGAAAAGCAAGCAGTAGTAAAACAGC
GACAGTTCAAAAGCGTTCACAAAGATGTTTCGTTTTTTGTTGGTATCAAT
GCTGATCATCGGCACATTATATTCTTCTGTTGAAGTCGATGCTGCACCAC
AACCAAAGCCAGCTGATGGCTCGTGCGATTTCTTCGGAACTGGTCAAATT
CATCCTAATGGTGCAGTTGTTCATACTCATGGTATGTGTTTCAAATGTGA
CAGTGGCGCTTTCCAAAATTGTTGATGTCTAAACAAAGTGAAGAAAGAAT
ATGAaataaatatcatttttttcagttgatttgaaaagaaatattctatt
atgtaaa Run BLAST on NCBI transcript from alignment at sc0000061:458169..459611+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005849 ID=TCONS_00005849|Name=TCONS_00005849|organism=Clytia hemisphaerica|type=transcript|length=1443bp|location=Sequence derived from alignment at sc0000061:458169..459611+ (Clytia hemisphaerica)
AAAAGATTTCCATGGTTGGACAGCCCATGATATTTTTCTAATCAAAACCC
TCTAATTAGCTCAAACAGAGTATGTTACTAATCCAAAAAAAGGCAGAAAA
AGAGATCGTTCCAACCACCTATAAAAGTGTAAATTTATTGGTAGTCTATC
TTCATTctacaattttgaaaacaagGAAAAGCAAGCAGTAGTAAAACAGG
TAAATATAGTTTTCACTATTCGGAATTTTTACTTTGGGAaatactaaagt
ctattcatgatatgcactattgcaatgtcttccacggacccaacagctga
ttggttgaaagtgacatattgactgattttatggcacttacaaccaatca
gctgtttggtCCTTGGAAAGCTGAcattgaaatcaaaataaatttactCA
AATGATAGATATGCTAATGGGATAGAAGGATCGGTAAACTTCGTTAGGCA
AAAGAATTTCCACTTTAGTTGGTCGGCTTTGAGCAATACTTAACTAAAAA
CTCGTAATTTGTGATTCGTGTATAACTACATACACTACATGTATGTTTGT
CAAACAATAAGTTGGTGAGTGCCGGTAATATTACCGTAAAGATGTCGGCA
ATATATTGTCGGCATGTCTTGTTTACAAAACAATAAAGTCCTTTTTATAG
AATGAATAACCTCCTTTGTCTATGTTGTTTACTTCGTATATTGCGGTctg
caaaccatattgtcgtaACATAATTCGCCAATGCATTGTGTAGTCTAAGC
AGACTTTGGTAATTAATTTTTGCCAGCAAGGTATCAAATCTTTCGCTCTC
AAGTTcctaatcaattttttttcttcatcctAACAGCGACAGTTCAAAAG
CGTTCACAAAGATGTTTCGTTTTTTGTTGGTATCAATGCTGATCATCGGC
ACATTATATTCTTCTGTTGAAGTCGATGCTGCACCACAACCAAAGCCAGC
TGATGGCTCGTGCGATTTCTTCGGAAGTAAGTTATcattttgaccaatga
aattgcTTCTTTTTCCTCCATCTATAACTGCATTGCTAGAAAAGTTCGAG
AATGACCTTCATCTATGTTTGAAGGTGCTGGTCTCCACGAGTGCGCAAAA
CGCGGATTGTTGCTGTTCAatcaaatttagatttttcaatcaTTAGAATT
AGAAGCAATCGATTTAGCTTTCAAATCTAGTGGCGAACGAAATATTTCGA
AAGGACTATTTTTGTCTTGGGTAAATAATAATCGTTAATCAAATATTATA
AATCATTATTATCTTATTTTCTTAGCTGGTCAAATTCATCCTAATGGTGC
AGTTGTTCATACTCATGGTATGTGTTTCAAATGTGACAGTGGCGCTTTCC
AAAATTGTTGATGTCTAAACAAAGTGAAGAAAGAATATGAaataaatatc
atttttttcagttgatttgaaaagaaatattctattatgtaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005849-exon-sc0000061-1491911889:458169..458367 | TCONS_00005849-exon-sc0000061-1491911889:458169..458367 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1510915933:458169..458367 | TCONS_00005849-exon-sc0000061-1510915933:458169..458367 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1575043694:458169..458367 | TCONS_00005849-exon-sc0000061-1575043694:458169..458367 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1491911889:459005..459144 | TCONS_00005849-exon-sc0000061-1491911889:459005..459144 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1510915933:459005..459144 | TCONS_00005849-exon-sc0000061-1510915933:459005..459144 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1575043694:459005..459144 | TCONS_00005849-exon-sc0000061-1575043694:459005..459144 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1491911889:459444..459611 | TCONS_00005849-exon-sc0000061-1491911889:459444..459611 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1510915933:459444..459611 | TCONS_00005849-exon-sc0000061-1510915933:459444..459611 | Clytia hemisphaerica | exon |
| TCONS_00005849-exon-sc0000061-1575043694:459444..459611 | TCONS_00005849-exon-sc0000061-1575043694:459444..459611 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:458169..459611 + |
Blast
The following BLAST results are available for this feature:
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