TCONS_00005837 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005837
Unique NameTCONS_00005837
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2334

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005837 ID=TCONS_00005837|Name=TCONS_00005837|organism=Clytia hemisphaerica|type=transcript|length=2334bp
NAAAAATCAGGGAACCGAATACCTCCATACAAAATCTGGATAAAAAATGG
ggtgttttaaaaagaaaaatcaagacGATGAGGAGAAAACAAGGAGACCT
AGTAATTCACCATTCAAACAACAACAGATGAAAGCATGGCAACCTGTTTT
AACTGCATCAACTGTGTTACCAATCTTTTTTCTAACTGCTGTTGTCTTTC
TACCATTGGGTATAACATTGCTTGTCTCATCGAATGGTATCAGAGAGAAA
ATCATTGAATACACAGACAATGAGGCATGCAGGCAATGCATCACTAAGGA
TGAAGGCATCACAAGTCCAGATCAAAATAAGTTCCTAGCTTGCAAAtgtg
aaattaaattcaaattgaatgaaaaatggGATGGTGACATCTACTTTTAC
TACGGCCTTGACAATTTTTACCAGAATCACAGAAGATATGTACGCTCAAG
AGATGATGCTCAACTTCATGGTAAACTATCTGATAAAGTAAGTCCCAACT
GCGCAGCACCTTTTGACAAAGGTTTGGTTGGCAATTCAACACACAATGAG
ACAAGACCAATTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCACAGA
TGTTTTCACTTTATACCACGCAAGTGATCTAAGCACAACAGTACCCCTGA
CTTCCACAGGAATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAAGAAT
CCATCGCCTATCTCCAAACTTGACACTTTTGCAAAACCAAAAGATTGGAA
TATCCCAATTTCAGCACTCGATAACCAAATGGTCAACGAAGACTTCATTG
TCTGGATGAGAGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCGAAAA
TTGGATACATCAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAATCAT
TGGAGAATACACATTGAAAATCGACTACAACTACCCTGTGAAGAGCTTTG
GTGGAAAGAAGAAGTTTATCATAACAACAGCCTCATGGATTGGAGGAAAG
AATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGAGCGTTATGCTTGGT
CTTTGgctttgttttcctttttattcACAAAAAACACAACAAGGGTAACT
CAAGATGATGAGTAAAAGTTACCATTGTTGCCAAACCATGAAAATCAAAG
GCAAAGTGAAAGCATCTTGCACAATTTATTCCACTTACTGCAAGAAACAG
TCACTCAAAATTTCCTTCCTTATGTAGCTCGATTATTCTGAATTTATAAA
ACAATTATCTTCAGCTGATATTATAAATAATTGTTTAATGTCATAATTAT
TCAATCTTCCTGTAAATAAGATGAATTTTTATATTTAGAtcatttaattt
ttattcacgacattaaaaattttcattttaattagatattttgTACAGTT
TTCTTTAAGTGTTTGAtacactaaagtctgtctcaatataatcttcaGTG
GATGATAAAATAGGCTGTAatttttgtgcttgttgaaagaAACGAGGGTT
GAATGGAACAACAAAacgatttttctgaaatttcacttttgaatatattt
ttaacgAGCTCAAAACCGCTATCTGATCCgtattctatcaaaagttacag
ccatttttgtctcagctgcaaattatattgagaaaGACTTTATATTGTGT
TTCAtgttttgactatttttttctgacagtcttttttatttcttcgtaAT
TCGCTGTCATCAAGGCAAAAgatccaatctcaaaattagtgtcTGAGGAA
ACTAAGAATCTTTCTGTTTTgctaactttaaattttgagattgacctTTT
TTCATGTAGATGGGATCCCCCTCACTACGAAAAAAGGGCCAAGCTCAAGA
TTTAAGGTTAGCCAAACAGAAAAATACCCAGTTTTCTCAGACACTACTTT
CGAGATTGGACCTTTTGCCTTGTATAATATACGTAAGTCATTTTAAGGGC
TAATcacattttatgaatttttttttttttttcctttattgttaaaagta
ttatttttcaGATTCTGAAGCATTCAAGACGGCTATAAAATATTGAACta
atggccattttaatttgtCAGATCTCATGTCACAAAGCCAGGAAAAATAT
CTTGttattaaaagtaataatttatTTCGTCAGGATTTATATATACAttt
taattttacaatttttcttttcGTGATTGTAAAGGCCcatctttcaagaa
atatattTATGTTCATGTTCCGATTGCATTGTTGTTATGATCTCGAGTCA
ATGAGGTCTTTGTAATAAATTACCTCAATTGGAAGGATGTTCTTATTCGG
ATTGTTTGAAATATACTGTCTGCAGATACCACCT
Run BLAST on NCBI

protein sequence of TCONS_00005837-protein

>TCONS_00005837-protein ID=TCONS_00005837-protein|Name=TCONS_00005837-protein|organism=Clytia hemisphaerica|type=polypeptide|length=353bp
MGCFKKKNQDDEEKTRRPSNSPFKQQQMKAWQPVLTASTVLPIFFLTAVV
FLPLGITLLVSSNGIREKIIEYTDNEACRQCITKDEGITSPDQNKFLACK
CEIKFKLNEKWDGDIYFYYGLDNFYQNHRRYVRSRDDAQLHGKLSDKVSP
NCAAPFDKGLVGNSTHNETRPIVPCGAVANSMFTDVFTLYHASDLSTTVP
LTSTGISWKSDRETKFKNPSPISKLDTFAKPKDWNIPISALDNQMVNEDF
IVWMRVAAFPTFRKLYRKLDTSSQVNKNYQDGLIIGEYTLKIDYNYPVKS
FGGKKKFIITTASWIGGKNSFLGTCYTVVGALCLVFGFVFLFIHKKHNKG
NSR
Run BLAST on NCBI

transcript from alignment at sc0000061:214732..226758+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005837 ID=TCONS_00005837|Name=TCONS_00005837|organism=Clytia hemisphaerica|type=transcript|length=12027bp|location=Sequence derived from alignment at sc0000061:214732..226758+ (Clytia hemisphaerica)
NAAAAATCAGGGAACCGAATACCTCCATACAAAATCTGGATAAAAAATGG ggtgttttaaaaagaaaaatcaagacGATGAGGAGAAAACAAGGAGACCT AGTAGTAAGGAAAATATTTACTTCATTGGCTTTTAATCAGGGGAAAGTTT CCCCGACCGTCCTTCGTTGgttgttttctgatttttttgtagcattttga aagttttgtatagagtcccctgcccagttggcgaccggtctagttggcga ccgaacgtctNagagcatgttaaaagttgtctaaccgttggttgaaaagg attttcaaaaaagtaaaaagtaagtgaaaaatttgaatcaaaaaaatttc ggtcgccaactgggcagggtactctaaGTCATAGCTACATTATATTAGct actccagaagatttttcaaattttaattttattcaaagCCTATCCCATCT TGTAGAGatttgaagaagaaagaaaatgaggggctGTATGCCTCTAGAGG ATAAGCGGTTGTATGANtgaacccagaaaagtcatgcaaaaacaaacctc ttgagaatttcttttggtagtaatctgccttgacctatttcccgtactgt gtaaaaaaaaaGTTCTAGAAAAGAATGAGTAGAATCCaaaagatccaact ttgcacggaagcacatGAAAAACccagatttttcgaaaaaaataaaaaat ggctacctgtggacaaaaaagcttcgtaagaaaaaacgcttcaactccca ctccaaaaaatacttgtccaaaacgatGANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATG ACGGTAACTTGTTTCAGTCTGTGTATAGAGATATCTATCCAGATGAGCTT GAACTCAAAATTGAGCACTCTGGTAAtcatgcttcttttttaaacctaGA TATTACCATCAAAGACgggatatttatttataagttgTTTGATAAACGGG ATGCATTTCCTTTTTCCATAGTCCGAATGCAGCATAAAGATAGCAACTTG CCAGAatcgattttttattcttcttttgttgATGAACTTCTCAGGATTGC TCGTTCTACGTTACTTTTCGAGGACTTGAAAGTTAAAGCCAAAGTTTTTA TACAAAGAATGCGATGTCAAGGTGCTGAAAACGCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNAAAgtaattgggtcggacatgatgtccgactagaa tcgatttgggtcagacatttcagcaattgggtcggacaatgtccgatgtc cgaccgctATTTCGAGCCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcatattttcct tttctactccaacctgattgattttctgtgaatgttcattctagattttt gttgtatttgtattgtctttttgttttgtgggtttttctctttattcttt ccattttgagtagttgaaggttttatacttctagactatatatatttaag gtaaagaggttgcgagatttgggttagcgaggcaaaaatcgctaaaaagc tggtaaaatcgtaatcctcaaaaatcaaagttcAAGCCTCACTGCCCTtg ctcttatcggccaaaatttttgaaaccaacTTTTACATCTTCGCAAACgc aattttttccaatcatGTCCGCCATCGCGTTGATCTCGCCTTCCCACCCG TCTTCGGGAAGGAAATGGCACCAcgctggccaatgaaaaaagagtttttt tatcaaagctaattcaaaactgtacttttaaagttgCGAATTTGTGCTCG AAGGTGAGAGCAAGTGAAATTGtatgctttcagtggagtttgtggacaaa atcagaaagaaattggctggAAAGATTTTCGTCCCAATACGTGtttttta tcggtatgtagttggaccccccacccccttatcggcccaatgccgataaa aaattcgaaagttttttgtcgaggGTCCCTAACAGGGGTAACATGATTtc tgagggcaaaagtttttagcaaaaatcgaaatttccaaggcgagagaaaa aaatgtatgaatttccaaggcaatggAAGTGAAAAAGGCAATTAAAAGAG TGGAGTTTCTGATGccttttgcaaaagtacatggagtTCATCGGAACTTc caaccaccactggaaaagaaaaattatttctgaggctagaaaaaatttaa aaatgcacgtcgtctgACGGGGagtaacaaaaattttatgGGATGGCCCA TTGGCAGCTTGGGAAATACGTGTTTCCATTATTTCAAGAAATGAGGTGCA TTGATGATGCAAGAAGTAATCAACAAAAGGAACcaataaaagatcaaaga aaaaaaCTACAGTAAGTGGGGAAAAATGATTGCTCATACCAAGCTTGGAG ATTTGGCAAACCCAAAGTAACGTTGGCAGGCTTCATGAGTTTTCCTGTGG TATATAATATGAAGGCTGCCTAGATTGGCGAAaacatgaagaaaaagaag aaaaactaaaattcaCCTTTCAACCCTTAGAATCAACATTTGATACAAAT AAAGTTATATGACTAGTTGTTATCCAAGGTCCCAAAAAGCCATTAGTGCC AAAAATTTAGGCCATTTGTTTTAACCTTCATCATATATggcaatctcatt ggttgaaatttaaaaaagactttccaATGGAGCAAATTACAGAAGCAACT GagaagaagagaccactttttttgcagatttcaatataaaaataGCATGG GGAATACTTCTGTCGATGTGTATTATGTGTCAACTATGTTAAGCATTTTA TTCTCGACTtgagttgagctagaatctgagaatgtctgtctgtctgtcta tgtcccaaaactttgaggcagcctggagacttcaaaaattgttggacaCT AAAATTTAGCACACttttccttgggtgaatatctggagcgttttttttca tttttcaaaaattttgatttttggggcctggggactagtttttcgccaaa acgaggctaaaactttggggcagcttggaaacgttaaaaattgtcggatt tggctgaaatttggcactcTTTTTCCTTGGGCCAATATCTGGGagtgctt ttttcatttttcaaaaattttgatatttgaggCCTGGTTACAAGTTTCTC GCCAAAATggctaaaactttggagcagcctacaggcctcaaaaatggtcg gatatggctgaaatttggcaaacTTGTTCGTTGGTTGAATATCTAGGGGG TCTACAATTCGCCCtatgaatgatttgaagccactgaagttgagtcCAGT GTGTTGAGCACATTCGACTATTGTTGAAATAGAAAAGAGGTAAGTCTAGC CTAGCCTAATTGTAAGCtgtctggggggggggggggggggatgaaTGAAT CAGTCATGGTTGACAAGTGACTCAAGTACCTGCTGCAGAGGAATAGTGGT acctgagttttaacactacgCAGGTCTAAATAAATAGGCCAAAATAGGAA ATGTCTCAATCATTCAGCTGACAGAAAATGACTGGTCAAGATTTCCTTTA TTCTTTTGTAGGAATCTTTAATAACCTTTAACAATCTTAATCTTGGCAGT GGTGTTTAAACTTAAGTACATGATAGGGAGGATAAAACTAATAGTCTAAA TCTCATCCAACTCATTATatgttagtcacactagcgaaTCCAGGTGTCAG AACTGGTCAGAAGtgcaatttttatattttttgacaaGAGCTGTTAAGTC ATTCTATTGCACCCCAGTAAGTGGCAGTTAGAGAGATAATGACTTTGATC TAAAAATAGTTTTCCTTTCTCATCTCAGCAAGAACTTATAGAGGCTGAAA TTTAACTTTATTTGTTTGTCTCCCCCATTGAGGCCGACCCTAAAAAATCT TTCGTTTCCGGTCCActgggtgacgaaaaaaaagtcATGCAGGCGgccgg gaaaaatttttttttggtccttttcatgatttctaatatttaataaaaaa attaggaagaaaaaaatcatctctTTGCTCTGGCTGTTAGTGTTGCCCCA CATTctgtctttatattttttctttcttctttctttcactgaaagaaatg tgttgttattaattacaaaaagctgtattttgtgattttttttctctaag aATCAACTAACTTTTCATTCTAATAAATTGATTTAATATGCataacacta tttatttgatctttaacgTCCAGAAAGCATgctaaataaacaaacttttt gaagagtgTTTATATAGGAATGATGTAACAGTTTGAATGAGTCATGAGTA aaggtttttataaagaaagtttCATCTGTTATCTATttggtccttataaa aaaaaaattcggccaggtgaaaaaaaaatttcacccgGCCAGTGGACcgt aaacaaaattttttttggggtCGGCCTGAGGTATGCATCCCCGAGATCTA AACTGATGTGGACACTGACCAAGGGATGTCAGTTAATTGGTTATGGAATC ACAAAATATATTGTTATTTATCACTTGGTTGAGACTAACtcaagaaaatt aaattaaaatcgAGTGAGACCACCAGTAAATTTACTAAAGATTTTTAGTT TCCCTGTGTTCaagctttctttcttttgactAAGCAAAAAGCCTTCTAAG GTAAATATGTGATTCTGTGCATGGAACCTAAATGAAACAACTTATATGCT TTGATGTGCTAGAAGTGTTAAAtcctttatttattttcaagcCTTCACTA TAATAAAACGTTTTGAATTTGTAGATTCACCATTCAAACAACAACAGATG AAAGCATGGCAACCTGTTTTAACTGCATCAACTGTGTTACCAATCTTTTT TCTAACTGCTGTTGTCTTTCTACCATTGGGTATAACATTGCTTGTCTCAT CGAATGGTGTAAGtcaacaaaaattttaagttgTATGTTCATTGTTACCA TAACTTGAGTTCACCTCACATTTGCGTTAGAAGAAACAGATTGCAATGTG GGCAGAACTGACCACTAGATCTGAGATAACAATAACAGaaataaaaatag caaaaaactcAATTAGATTTTCATACACTGGTCATGAAATGCCAGCCAAA TAATtatattcactaaaatatttgttattaTTATCTGTCTGATTCAATTC AGACGAGgttcttttcatcaaaattgttttgtttttttgttttttcttca atttttaattcATCACGTTTTACAAtataaagaaactttttgtCAGTGca cagaaaaaaagacaaagtcAAAAGGACATGCAGAAAGATTGAGCTGattg ttttttctcttttgattTACTGTACATGCAACTAAAAATCTACACATTTG CTTTCAGATCAGAGAGAAAATCATTGAATACACAGACAATGAGGCATGCA GGCAATGCATCACTAAGGATGAAGGCATCACAAGTCCAGATCAAAATAAG TTCCTAGCTTGCAAAtgtgaaattaaattcaaattgaatgaaaaatggGA TGGTGACATCTACTTTTACTACGGCCTTGACAATTTTTACCAGGtaatat tttgacaaaacttTAACAATGCAATCATAAGAAAAGCTTTACAATCAGTA CAATTTCTTATTGTTTACGGCTATAACACTATAACACATTGATTGATTTG AATCAAAATAGCTTTAATTATTGTGAATCAATTTCATTCTAAAGTTTGAG AATTATGGTATTTGATTGTGAAAAGCAACAGCtttctttgttgattttta tctaTCTATCGGCTGTTAGTGTTAAGTACCATTAAGTGCGTGGATTTTTT AACTGTTGAGGTTGTCAAAGTTCTTATTCATAATGAATGAAGAGAAATTT ATTCAACCATTTAGAATCACAGAAGATATGTACGCTCAAGAGATGATGCT CAACTTCATGGTAAACTATCTGATAAAGTAAGTCCCAACTGCGCAGCACC TTTTGACAAAGGTTTGGTTGGCAATTCAACACACAATGAGACAAGACCAA TTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCACAGGTAAAAGTGAA CATTTCAACATATTTTACTCCTAGATCATCACTGATCTTTTTTCCTTTCT CAATATTCGACTTTTAAACTCcatctttttttaatatttatcgGATTATT ATTACATTGAACTGTTCTGTaaattgacaatttattttattagtCGGAAC AACTTCCATCTTTTGACTTGCTGCTGTAGAAAAAGCTATGAGTTCATTGC ATTTTATCAGATAGACTTTAATTTATGTACCTTTCTTTTCATAGATGTTT TCACTTTATACCACGCAAGTGATCTAAGCACAACAGTACCCCTGACTTCC ACAGGAATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAAGAATCCATC GCCTATCTCCAAACTTGACACTTTTGCAAAACCAAAAGATTGGAATATCC CAATTTCAGCACTCGATAACCAAATGGTCAACGAAGACTTCATTGTCTGG ATGAGAGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCGAAAATTGGA TACATCAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAATCATTGGAG AATACACATTGAAAATCGACTACAGTTAGTATTTTTTATAtgggaaataa tttttcagataatttcaATATGATTCACACATCTGATGTCAATTAAATTA AAGACATTTTGTCTTCCATCTCATCTCATAACATCAGTTCCAGTTCAAAG GTTTTCCCTTCCTAACCCTACATTTTATgaagattctttttttttaagtg tgAAAATCTGAATTTAAACTAAGCAATAAGGAGTTTTTggtataaacaaa aaaaaaagtaagttCACTAAAAAAAGTGTTGATATACTAAAAGTTAATAA TTTCCTCTAAAACAATAATTCTACTATTCTACTATTATAGACTACCCTGT GAAGAGCTTTGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTCATGGA TTGGAGGAAAGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGAGCG TTATGCTTGGTCTTTGgctttgttttcctttttattcACAAAAAACACAA CAAGTAAGTTAGTaactcttatttttttgaaaaaataacgtgTTTGTCGT ATGTTTCCCAATGCACTGGATGcaccatgaaaaaaattaacattttgaat aaaatttcctCAAGTTCAATGAGTTGTAACaaagttaatatttttgtatt aCAAAGAAGGATAAAAAGTGCTCTATAACCAGAACATTTATTTTTCAACA AGTAAGAAAATGTTTTACTGTCAGTTCCAcccaaaggattttcaaatgta aaatgATTTACTTTTactatgaaaaaagtttctcaatAAAAACATAGAAT CCTTTTGGGAGTATACAAAAAGTACATAGTATTGGtattagaaagaaaaa agataaattaaatttttggtgGATAGTGTATATCGAATTTGGGAAAGTGG ATCCAAAATTATGTTCAAAATAATATAAAGTTTAAATATTCATGAGTGCT TTAAATCATTTATTTCGTGCAAAGAAATGACAAATGATGATTTATCAGAG CTTTTGCAGGAGACTGCAAGAGTGATTAGATTTTACGCAATTAATCGCAT AAAATCTGAAGCAAACATCTTCATGGTGTCAGCCttggtttaggtcccag gcaaaaaattaggtcccccgtgagttttaagtccccctaaagattcatga aatttttggtAGCCCTAAGGGCTTTCAGCTTCACGAGCTTTAATTTGAGT AATATAAGCCAACCATTAAGATGAAGTATTCAGTATTTAGCAACCATGTT AAATGATGAGATTTCAGCTCCCCCAAGTTCATTAGATCccccaaatattt gaaacatcttTAGCCCCCACCTTTTTTGGGCTTTTTGGAGGCTGTAACCC CCCCCCAAACTATtaggggggctgacgctatggaATCTCAGGAGGAATAA AGTCCACTATCAAAGTCTAGAAttaaaaaacctaaaatttgatgaatgaa aaatcCAAAAGCCTAATCTTTTTTCTCTGATGCAAAAGAAGTCATTCTTC TGATGTTTGTAGAACTTAggagaaaattgaatttaaattaaaagtgttaa aaaacttCTTCATGGTACATgctgtatttttttaatttttccacaTCAAC ATCCACCATAGATTTTAGTTTGTATGCTTTCTTCATCCTTATAATTCATA ATGAAAATTAATAATTGTATGGTAATGTGCGCCACCTCTGAAAACCATCT TCATTTTACCACATCATAAGTCAATTTTGATTTCCAATAATATTCTGTCT ACTCAGGACTTAGTAAGCTTTTCTCATCTCTTCAAACTTGATCATTTTTA GGGGTAACTCAAGATGATGAGTAAAAGTTACCATTGTTGCCAAACCATGA AAATCAAAGGCAAAGTGAAAGCATCTTGCACAATTTATTCCACTTGTATG TAGTAAGAAATGAATTGAATTTGTATGGAATAGGTTTTGGATGGCACCAA CTTTACTTGATGTATATTATTTTACCATGCCTTTTTCCGACCGACTCCAG TCTTCAAACAATATCAAAGGCCtataattatataaaaaatacacCAGATT TACATTAACAGTTTAACCAATAGCACAGCACAGCACCTTGTTGatatttt gaagaaagaaaaattaaaatttctataTTTTCATTCTATAAGCTTTTCAT ACCtctaaaattttgcagaaatgAATCTGAAAAGTGAGatagaaaaactt gaaaattaacTCTCTTTTTTAACTTTAAGACTGCAAGAAACAGTCACTCA AAATTTCCTTCCTTATGTAGCTCGATTATTCTGAATTTATAAAACAATTA TCTTCAGCTGATATTATAAATAATTGTTTAATGTCATAATTATTCAATCT TCCTGTAAATAAGATGAATTTTTATATTTAGAtcatttaatttttattca cgacattaaaaattttcattttaattagatattttgTACAGTTTTCTTTA AGTGTTTGAtacactaaagtctgtctcaatataatcttcaGTGGATGATA AAATAGGCTGTAatttttgtgcttgttgaaagaAACGAGGGTTGAATGGA ACAACAAAacgatttttctgaaatttcacttttgaatatatttttaacgA GCTCAAAACCGCTATCTGATCCgtattctatcaaaagttacagccatttt tgtctcagctgcaaattatattgagaaaGACTTTATATTGTGTTTCAtgt tttgactatttttttctgacagtcttttttatttcttcgtaATTCGCTGT CATCAAGGCAAAAgatccaatctcaaaattagtgtcTGAGGAAACTAAGA ATCTTTCTGTTTTgctaactttaaattttgagattgacctTTTTTCATGT AGATGGGATCCCCCTCACTACGAAAAAAGGGCCAAGCTCAAGATTTAAGG TTAGCCAAACAGAAAAATACCCAGTTTTCTCAGACACTACTTTCGAGATT GGACCTTTTGCCTTGTATAATATACGTAAGTCATTTTAAGGGCTAATcac attttatgaatttttttttttttttcctttattgttaaaagtattatttt tcaGATTCTGAAGCATTCAAGACGGCTATAAAATATTGAACtaatggcca ttttaatttgtCAGATCTCATGTCACAAAGCCAGGAAAAATATCTTGtta ttaaaagtaataatttatTTCGTCAGGATTTATATATACAttttaatttt acaatttttcttttcGTGATTGTAAAGGCCcatctttcaagaaatatatt TATGTTCATGTTCCGATTGCATTGTTGTTATGATCTCGAGTCAATGAGGT CTTTGTAATAAATTACCTCAATTGGAAGGATGTTCTTATTCGGATTGTTT GAAATATACTGTCTGCAGATACCACCT

Coding sequence (CDS) from alignment at sc0000061:214732..226758+

>TCONS_00005837 ID=TCONS_00005837|Name=TCONS_00005837|organism=Clytia hemisphaerica|type=CDS|length=7434bp|location=Sequence derived from alignment at sc0000061:214732..226758+ (Clytia hemisphaerica)
ATGGggtgttttaaaaagaaaaatcaagacGATGAGGAGAAAACAAGGAG
ACCTAGTAATTCACCATTCAAACAACAACAGATGAAAGCATGGCAACCTG
TTTTAACTGCATCAACTGTGTTACCAATCTTTTTTCTAACTGCTGTTGTC
TTTCTACCATTGGGTATAACATTGCTTGTCTCATCGAATGGTATCAGAGA
GAAAATCATTGAATACACAGACAATGAGGCATGCAGGCAATGCATCACTA
AGGATGAAGGCATCACAAGTCCAGATCAAAATAAGTTCCTAGCTTGCAAA
tgtgaaattaaattcaaattgaatgaaaaatggGATGGTGACATCTACTT
TTACTACGGCCTTGACAATTTTTACCAGAATCACAGAAGATATGTACGCT
CAAGAGATGATGCTCAACTTCATGGTAAACTATCTGATAAAGTAAGTCCC
AACTGCGCAGCACCTTTTGACAAAGGTTTGGTTGGCAATTCAACACACAA
TGAGACAAGACCAATTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCA
CAGATGTTTTCACTTTATACCACGCAAGTGATCTAAGCACAACAGTACCC
CTGACTTCCACAGGAATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAA
GAATCCATCGCCTATCTCCAAACTTGACACTTTTGCAAAACCAAAAGATT
GGAATATCCCAATTTCAGCACTCGATAACCAAATGGTCAACGAAGACTTC
ATTGTCTGGATGAGAGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCG
AAAATTGGATACATCAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAA
TCATTGGAGAATACACATTGAAAATCGACTACAACTACCCTGTGAAGAGC
TTTGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTCATGGATTGGAGG
AAAGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGAGCGTTATGCT
TGGTCTTTGgctttgttttcctttttattcACAAAAAACACAACAAGGGT
AACTCAAGATGAATGGggtgttttaaaaagaaaaatcaagacGATGAGGA
GAAAACAAGGAGACCTAGTAATTCACCATTCAAACAACAACAGATGAAAG
CATGGCAACCTGTTTTAACTGCATCAACTGTGTTACCAATCTTTTTTCTA
ACTGCTGTTGTCTTTCTACCATTGGGTATAACATTGCTTGTCTCATCGAA
TGGTATCAGAGAGAAAATCATTGAATACACAGACAATGAGGCATGCAGGC
AATGCATCACTAAGGATGAAGGCATCACAAGTCCAGATCAAAATAAGTTC
CTAGCTTGCAAAtgtgaaattaaattcaaattgaatgaaaaatggGATGG
TGACATCTACTTTTACTACGGCCTTGACAATTTTTACCAGAATCACAGAA
GATATGTACGCTCAAGAGATGATGCTCAACTTCATGGTAAACTATCTGAT
AAAGTAAGTCCCAACTGCGCAGCACCTTTTGACAAAGGTTTGGTTGGCAA
TTCAACACACAATGAGACAAGACCAATTGTACCATGTGGTGCTGTTGCTA
ACAGCATGTTCACAGATGTTTTCACTTTATACCACGCAAGTGATCTAAGC
ACAACAGTACCCCTGACTTCCACAGGAATTTCCTGGAAAAGTGACCGTGA
AACAAAATTCAAGAATCCATCGCCTATCTCCAAACTTGACACTTTTGCAA
AACCAAAAGATTGGAATATCCCAATTTCAGCACTCGATAACCAAATGGTC
AACGAAGACTTCATTGTCTGGATGAGAGTTGCAGCCTTTCCTACTTTTCG
AAAATTGTACCGAAAATTGGATACATCAAGCCAGGTTAACAAAAATTATC
AAGATGGTTTAATCATTGGAGAATACACATTGAAAATCGACTACAACTAC
CCTGTGAAGAGCTTTGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTC
ATGGATTGGAGGAAAGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTG
GAGCGTTATGCTTGGTCTTTGgctttgttttcctttttattcACAAAAAA
CACAACAAGGGTAACTCAAGATGAATGGggtgttttaaaaagaaaaatca
agacGATGAGGAGAAAACAAGGAGACCTAGTAATTCACCATTCAAACAAC
AACAGATGAAAGCATGGCAACCTGTTTTAACTGCATCAACTGTGTTACCA
ATCTTTTTTCTAACTGCTGTTGTCTTTCTACCATTGGGTATAACATTGCT
TGTCTCATCGAATGGTATCAGAGAGAAAATCATTGAATACACAGACAATG
AGGCATGCAGGCAATGCATCACTAAGGATGAAGGCATCACAAGTCCAGAT
CAAAATAAGTTCCTAGCTTGCAAAtgtgaaattaaattcaaattgaatga
aaaatggGATGGTGACATCTACTTTTACTACGGCCTTGACAATTTTTACC
AGAATCACAGAAGATATGTACGCTCAAGAGATGATGCTCAACTTCATGGT
AAACTATCTGATAAAGTAAGTCCCAACTGCGCAGCACCTTTTGACAAAGG
TTTGGTTGGCAATTCAACACACAATGAGACAAGACCAATTGTACCATGTG
GTGCTGTTGCTAACAGCATGTTCACAGATGTTTTCACTTTATACCACGCA
AGTGATCTAAGCACAACAGTACCCCTGACTTCCACAGGAATTTCCTGGAA
AAGTGACCGTGAAACAAAATTCAAGAATCCATCGCCTATCTCCAAACTTG
ACACTTTTGCAAAACCAAAAGATTGGAATATCCCAATTTCAGCACTCGAT
AACCAAATGGTCAACGAAGACTTCATTGTCTGGATGAGAGTTGCAGCCTT
TCCTACTTTTCGAAAATTGTACCGAAAATTGGATACATCAAGCCAGGTTA
ACAAAAATTATCAAGATGGTTTAATCATTGGAGAATACACATTGAAAATC
GACTACAACTACCCTGTGAAGAGCTTTGGTGGAAAGAAGAAGTTTATCAT
AACAACAGCCTCATGGATTGGAGGAAAGAATTCTTTCTTGGGGACTTGTT
ACACTGTTGTTGGAGCGTTATGCTTGGTCTTTGgctttgttttccttttt
attcACAAAAAACACAACAAGGGTAACTCAAGATGAATGGggtgttttaa
aaagaaaaatcaagacGATGAGGAGAAAACAAGGAGACCTAGTAATTCAC
CATTCAAACAACAACAGATGAAAGCATGGCAACCTGTTTTAACTGCATCA
ACTGTGTTACCAATCTTTTTTCTAACTGCTGTTGTCTTTCTACCATTGGG
TATAACATTGCTTGTCTCATCGAATGGTATCAGAGAGAAAATCATTGAAT
ACACAGACAATGAGGCATGCAGGCAATGCATCACTAAGGATGAAGGCATC
ACAAGTCCAGATCAAAATAAGTTCCTAGCTTGCAAAtgtgaaattaaatt
caaattgaatgaaaaatggGATGGTGACATCTACTTTTACTACGGCCTTG
ACAATTTTTACCAGAATCACAGAAGATATGTACGCTCAAGAGATGATGCT
CAACTTCATGGTAAACTATCTGATAAAGTAAGTCCCAACTGCGCAGCACC
TTTTGACAAAGGTTTGGTTGGCAATTCAACACACAATGAGACAAGACCAA
TTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCACAGATGTTTTCACT
TTATACCACGCAAGTGATCTAAGCACAACAGTACCCCTGACTTCCACAGG
AATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAAGAATCCATCGCCTA
TCTCCAAACTTGACACTTTTGCAAAACCAAAAGATTGGAATATCCCAATT
TCAGCACTCGATAACCAAATGGTCAACGAAGACTTCATTGTCTGGATGAG
AGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCGAAAATTGGATACAT
CAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAATCATTGGAGAATAC
ACATTGAAAATCGACTACAACTACCCTGTGAAGAGCTTTGGTGGAAAGAA
GAAGTTTATCATAACAACAGCCTCATGGATTGGAGGAAAGAATTCTTTCT
TGGGGACTTGTTACACTGTTGTTGGAGCGTTATGCTTGGTCTTTGgcttt
gttttcctttttattcACAAAAAACACAACAAGGGTAACTCAAGATGAAT
GGggtgttttaaaaagaaaaatcaagacGATGAGGAGAAAACAAGGAGAC
CTAGTAATTCACCATTCAAACAACAACAGATGAAAGCATGGCAACCTGTT
TTAACTGCATCAACTGTGTTACCAATCTTTTTTCTAACTGCTGTTGTCTT
TCTACCATTGGGTATAACATTGCTTGTCTCATCGAATGGTATCAGAGAGA
AAATCATTGAATACACAGACAATGAGGCATGCAGGCAATGCATCACTAAG
GATGAAGGCATCACAAGTCCAGATCAAAATAAGTTCCTAGCTTGCAAAtg
tgaaattaaattcaaattgaatgaaaaatggGATGGTGACATCTACTTTT
ACTACGGCCTTGACAATTTTTACCAGAATCACAGAAGATATGTACGCTCA
AGAGATGATGCTCAACTTCATGGTAAACTATCTGATAAAGTAAGTCCCAA
CTGCGCAGCACCTTTTGACAAAGGTTTGGTTGGCAATTCAACACACAATG
AGACAAGACCAATTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCACA
GATGTTTTCACTTTATACCACGCAAGTGATCTAAGCACAACAGTACCCCT
GACTTCCACAGGAATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAAGA
ATCCATCGCCTATCTCCAAACTTGACACTTTTGCAAAACCAAAAGATTGG
AATATCCCAATTTCAGCACTCGATAACCAAATGGTCAACGAAGACTTCAT
TGTCTGGATGAGAGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCGAA
AATTGGATACATCAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAATC
ATTGGAGAATACACATTGAAAATCGACTACAACTACCCTGTGAAGAGCTT
TGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTCATGGATTGGAGGAA
AGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGAGCGTTATGCTTG
GTCTTTGgctttgttttcctttttattcACAAAAAACACAACAAGGGTAA
CTCAAGATGAATGGggtgttttaaaaagaaaaatcaagacGATGAGGAGA
AAACAAGGAGACCTAGTAATTCACCATTCAAACAACAACAGATGAAAGCA
TGGCAACCTGTTTTAACTGCATCAACTGTGTTACCAATCTTTTTTCTAAC
TGCTGTTGTCTTTCTACCATTGGGTATAACATTGCTTGTCTCATCGAATG
GTATCAGAGAGAAAATCATTGAATACACAGACAATGAGGCATGCAGGCAA
TGCATCACTAAGGATGAAGGCATCACAAGTCCAGATCAAAATAAGTTCCT
AGCTTGCAAAtgtgaaattaaattcaaattgaatgaaaaatggGATGGTG
ACATCTACTTTTACTACGGCCTTGACAATTTTTACCAGAATCACAGAAGA
TATGTACGCTCAAGAGATGATGCTCAACTTCATGGTAAACTATCTGATAA
AGTAAGTCCCAACTGCGCAGCACCTTTTGACAAAGGTTTGGTTGGCAATT
CAACACACAATGAGACAAGACCAATTGTACCATGTGGTGCTGTTGCTAAC
AGCATGTTCACAGATGTTTTCACTTTATACCACGCAAGTGATCTAAGCAC
AACAGTACCCCTGACTTCCACAGGAATTTCCTGGAAAAGTGACCGTGAAA
CAAAATTCAAGAATCCATCGCCTATCTCCAAACTTGACACTTTTGCAAAA
CCAAAAGATTGGAATATCCCAATTTCAGCACTCGATAACCAAATGGTCAA
CGAAGACTTCATTGTCTGGATGAGAGTTGCAGCCTTTCCTACTTTTCGAA
AATTGTACCGAAAATTGGATACATCAAGCCAGGTTAACAAAAATTATCAA
GATGGTTTAATCATTGGAGAATACACATTGAAAATCGACTACAACTACCC
TGTGAAGAGCTTTGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTCAT
GGATTGGAGGAAAGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGA
GCGTTATGCTTGGTCTTTGgctttgttttcctttttattcACAAAAAACA
CAACAAGGGTAACTCAAGATGAATGGggtgttttaaaaagaaaaatcaag
acGATGAGGAGAAAACAAGGAGACCTAGTAATTCACCATTCAAACAACAA
CAGATGAAAGCATGGCAACCTGTTTTAACTGCATCAACTGTGTTACCAAT
CTTTTTTCTAACTGCTGTTGTCTTTCTACCATTGGGTATAACATTGCTTG
TCTCATCGAATGGTATCAGAGAGAAAATCATTGAATACACAGACAATGAG
GCATGCAGGCAATGCATCACTAAGGATGAAGGCATCACAAGTCCAGATCA
AAATAAGTTCCTAGCTTGCAAAtgtgaaattaaattcaaattgaatgaaa
aatggGATGGTGACATCTACTTTTACTACGGCCTTGACAATTTTTACCAG
AATCACAGAAGATATGTACGCTCAAGAGATGATGCTCAACTTCATGGTAA
ACTATCTGATAAAGTAAGTCCCAACTGCGCAGCACCTTTTGACAAAGGTT
TGGTTGGCAATTCAACACACAATGAGACAAGACCAATTGTACCATGTGGT
GCTGTTGCTAACAGCATGTTCACAGATGTTTTCACTTTATACCACGCAAG
TGATCTAAGCACAACAGTACCCCTGACTTCCACAGGAATTTCCTGGAAAA
GTGACCGTGAAACAAAATTCAAGAATCCATCGCCTATCTCCAAACTTGAC
ACTTTTGCAAAACCAAAAGATTGGAATATCCCAATTTCAGCACTCGATAA
CCAAATGGTCAACGAAGACTTCATTGTCTGGATGAGAGTTGCAGCCTTTC
CTACTTTTCGAAAATTGTACCGAAAATTGGATACATCAAGCCAGGTTAAC
AAAAATTATCAAGATGGTTTAATCATTGGAGAATACACATTGAAAATCGA
CTACAACTACCCTGTGAAGAGCTTTGGTGGAAAGAAGAAGTTTATCATAA
CAACAGCCTCATGGATTGGAGGAAAGAATTCTTTCTTGGGGACTTGTTAC
ACTGTTGTTGGAGCGTTATGCTTGGTCTTTGgctttgttttcctttttat
tcACAAAAAACACAACAAGGGTAACTCAAGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003330XLOC_003330Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005837-proteinTCONS_00005837-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005837-exon-sc0000061-1491911889:214732..214835TCONS_00005837-exon-sc0000061-1491911889:214732..214835Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:214732..214835TCONS_00005837-exon-sc0000061-1510915933:214732..214835Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:214732..214835TCONS_00005837-exon-sc0000061-1575043694:214732..214835Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:221556..221689TCONS_00005837-exon-sc0000061-1491911889:221556..221689Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:221556..221689TCONS_00005837-exon-sc0000061-1510915933:221556..221689Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:221556..221689TCONS_00005837-exon-sc0000061-1575043694:221556..221689Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:222139..222324TCONS_00005837-exon-sc0000061-1491911889:222139..222324Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:222139..222324TCONS_00005837-exon-sc0000061-1510915933:222139..222324Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:222139..222324TCONS_00005837-exon-sc0000061-1575043694:222139..222324Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:222646..222820TCONS_00005837-exon-sc0000061-1491911889:222646..222820Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:222646..222820TCONS_00005837-exon-sc0000061-1510915933:222646..222820Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:222646..222820TCONS_00005837-exon-sc0000061-1575043694:222646..222820Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:223076..223405TCONS_00005837-exon-sc0000061-1491911889:223076..223405Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:223076..223405TCONS_00005837-exon-sc0000061-1510915933:223076..223405Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:223076..223405TCONS_00005837-exon-sc0000061-1575043694:223076..223405Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:223722..223884TCONS_00005837-exon-sc0000061-1491911889:223722..223884Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:223722..223884TCONS_00005837-exon-sc0000061-1510915933:223722..223884Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:223722..223884TCONS_00005837-exon-sc0000061-1575043694:223722..223884Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:225183..225276TCONS_00005837-exon-sc0000061-1491911889:225183..225276Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:225183..225276TCONS_00005837-exon-sc0000061-1510915933:225183..225276Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:225183..225276TCONS_00005837-exon-sc0000061-1575043694:225183..225276Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1491911889:225611..226758TCONS_00005837-exon-sc0000061-1491911889:225611..226758Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1510915933:225611..226758TCONS_00005837-exon-sc0000061-1510915933:225611..226758Clytia hemisphaericaexon
TCONS_00005837-exon-sc0000061-1575043694:225611..226758TCONS_00005837-exon-sc0000061-1575043694:225611..226758Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:214732..226758 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.64986 2.08427 3.04894 2.65852 0.547945 1.36037 0 0 22.0869 25.6741 15.1259 16.219 26.8092 25.6636 16.3786 16.6413 20.7288 23.1691 19.7517 26.6253 10.0546 13.8685 6.7612 5.87715 0.882721 0 14.888 9.62358 9.01995 13.046
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005045CDC50/LEM3_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
Blast
BLAST of TCONS_00005837 vs. Swiss-Prot (Human)
Match: CC50B (Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.701e-84
Identity = 146/352 (41.48%), Postives = 196/352 (55.68%), Query Frame = 2
Query:   83 EKTRRPSNSPFKQQQMKAWQPVLTASTVLPIFFLTAVVFLPLGITLLVSSNGIREKIIEYTDNEA---CRQCITKDEGITSPDQNKFLACKCEIKFKLNEKWDGDIYFYYGLDNFYQNHRRYVRSRDDAQLHGKLSDKVSP-NCAAPFDKGLVGNSTHNETRPIVPCGAVANSMFTDVFTLYHASDLS---TTVPLTSTGISWKSDRETKFKNPSPIS-----KLDTFAKPKDWNIPISAL-----DNQMVNEDFIVWMRVAAFPTFRKLYRKLDTSSQVNKNYQDGLIIGEYTLKIDYNYPVKSFGGKKKFIITTASWIGGKNSFLGTCYTVVGALCLVFGFVFLFIHKKH 1087
                +P N+ F QQ++ AWQP+L+AS  LP+FF   + F+ LG+ L  SSNGI+E   +YT +     C  C    +G   P       C C   F L E + G +Y YY L NFYQN+RRY  SRDDAQL G  S    P N  AP+ +   G        PI PCGA+ANS+F D F+L+H          VPL  +GI+W +D   KF+NP  ++          A P +W  P+  L     +   +N+DF+VWMR AA PTFRKLY ++        NY  GL  G Y + I YNYPV++FGG K  I ++ SW+GGKN FLG  Y VVG+LC++ GFV L ++ ++
Sbjct:    8 RGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKELEYDYTGDPGTGNCSVCAAAGQGRALPP-----PCSCAWYFSLPELFQGPVYLYYELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAG-------LPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQG-----NYSAGLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYIRY 342          
The following BLAST results are available for this feature:
BLAST of TCONS_00005837 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC50B3.701e-8441.48Cell cycle control protein 50B OS=Homo sapiens GN=... [more]
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