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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005836 ID=TCONS_00005836|Name=TCONS_00005836|organism=Clytia hemisphaerica|type=transcript|length=2670bp
TTNAAAAATCAGGGAACCGAATACCTCCATACAAAATCTGGATAAAAAAT
GGggtgttttaaaaagaaaaatcaagacGATGAGGAGAAAACAAGGAGAC
CTAGTAATTCACCATTCAAACAACAACAGATGAAAGCATGGCAACCTGTT
TTAACTGCATCAACTGTGTTACCAATCTTTTTTCTAACTGCTGTTGTCTT
TCTACCATTGGGTATAACATTGCTTGTCTCATCGAATGGTATCAGAGAGA
AAATCATTGAATACACAGACAATGAGGCATGCAGGCAATGCATCACTAAG
GATGAAGGCATCACAAGTCCAGATCAAAATAAGTTCCTAGCTTGCAAAtg
tgaaattaaattcaaattgaatgaaaaatggGATGGTGACATCTACTTTT
ACTACGGCCTTGACAATTTTTACCAGAATCACAGAAGATATGTACGCTCA
AGAGATGATGCTCAACTTCATGGTAAACTATCTGATAAAGTAAGTCCCAA
CTGCGCAGCACCTTTTGACAAAGGTTTGGTTGGCAATTCAACACACAATG
AGACAAGACCAATTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCACA
GATGTTTTCACTTTATACCACGCAAGTGATCTAAGCACAACAGTACCCCT
GACTTCCACAGGAATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAAGA
ATCCATCGCCTATCTCCAAACTTGACACTTTTGCAAAACCAAAAGATTGG
AATATCCCAATTTCAGCACTCGATAACCAAATGGTCAACGAAGACTTCAT
TGTCTGGATGAGAGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCGAA
AATTGGATACATCAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAATC
ATTGGAGAATACACATTGAAAATCGACTACAACTACCCTGTGAAGAGCTT
TGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTCATGGATTGGAGGAA
AGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGAGCGTTATGCTTG
GTCTTTGgctttgttttcctttttattcACAAAAAACACAACAAGGGTAA
CTCAAGATGATGAGTAAAAGTTACCATTGTTGCCAAACCATGAAAATCAA
AGGCAAAGTGAAAGCATCTTGCACAATTTATTCCACTTGTATGTAGTAAG
AAATGAATTGAATTTGTATGGAATAGGTTTTGGATGGCACCAACTTTACT
TGATGTATATTATTTTACCATGCCTTTTTCCGACCGACTCCAGTCTTCAA
ACAATATCAAAGGCCtataattatataaaaaatacacCAGATTTACATTA
ACAGTTTAACCAATAGCACAGCACAGCACCTTGTTGatattttgaagaaa
gaaaaattaaaatttctataTTTTCATTCTATAAGCTTTTCATACCtcta
aaattttgcagaaatgAATCTGAAAAGTGAGatagaaaaacttgaaaatt
aacTCTCTTTTTTAACTTTAAGACTGCAAGAAACAGTCACTCAAAATTTC
CTTCCTTATGTAGCTCGATTATTCTGAATTTATAAAACAATTATCTTCAG
CTGATATTATAAATAATTGTTTAATGTCATAATTATTCAATCTTCCTGTA
AATAAGATGAATTTTTATATTTAGAtcatttaatttttattcacgacatt
aaaaattttcattttaattagatattttgTACAGTTTTCTTTAAGTGTTT
GAtacactaaagtctgtctcaatataatcttcaGTGGATGATAAAATAGG
CTGTAatttttgtgcttgttgaaagaAACGAGGGTTGAATGGAACAACAA
AacgatttttctgaaatttcacttttgaatatatttttaacgAGCTCAAA
ACCGCTATCTGATCCgtattctatcaaaagttacagccatttttgtctca
gctgcaaattatattgagaaaGACTTTATATTGTGTTTCAtgttttgact
atttttttctgacagtcttttttatttcttcgtaATTCGCTGTCATCAAG
GCAAAAgatccaatctcaaaattagtgtcTGAGGAAACTAAGAATCTTTC
TGTTTTgctaactttaaattttgagattgacctTTTTTCATGTAGATGGG
ATCCCCCTCACTACGAAAAAAGGGCCAAGCTCAAGATTTAAGGTTAGCCA
AACAGAAAAATACCCAGTTTTCTCAGACACTACTTTCGAGATTGGACCTT
TTGCCTTGTATAATATACGTAAGTCATTTTAAGGGCTAATcacattttat
gaatttttttttttttttcctttattgttaaaagtattatttttcaGATT
CTGAAGCATTCAAGACGGCTATAAAATATTGAACtaatggccattttaat
ttgtCAGATCTCATGTCACAAAGCCAGGAAAAATATCTTGttattaaaag
taataatttatTTCGTCAGGATTTATATATACAttttaattttacaattt
ttcttttcGTGATTGTAAAGGCCcatctttcaagaaatatattTATGTTC
ATGTTCCGATTGCATTGTTGTTATGATCTCGAGTCAATGAGGTCTTTGTA
ATAAATTACCTCAATTGGAAGGATGTTCTTATTCGGATTGTTTGAAATAT
ACTGTCTGCAGATACCACCT Run BLAST on NCBI transcript from alignment at sc0000061:214730..226758+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005836 ID=TCONS_00005836|Name=TCONS_00005836|organism=Clytia hemisphaerica|type=transcript|length=12029bp|location=Sequence derived from alignment at sc0000061:214730..226758+ (Clytia hemisphaerica)
TTNAAAAATCAGGGAACCGAATACCTCCATACAAAATCTGGATAAAAAAT
GGggtgttttaaaaagaaaaatcaagacGATGAGGAGAAAACAAGGAGAC
CTAGTAGTAAGGAAAATATTTACTTCATTGGCTTTTAATCAGGGGAAAGT
TTCCCCGACCGTCCTTCGTTGgttgttttctgatttttttgtagcatttt
gaaagttttgtatagagtcccctgcccagttggcgaccggtctagttggc
gaccgaacgtctNagagcatgttaaaagttgtctaaccgttggttgaaaa
ggattttcaaaaaagtaaaaagtaagtgaaaaatttgaatcaaaaaaatt
tcggtcgccaactgggcagggtactctaaGTCATAGCTACATTATATTAG
ctactccagaagatttttcaaattttaattttattcaaagCCTATCCCAT
CTTGTAGAGatttgaagaagaaagaaaatgaggggctGTATGCCTCTAGA
GGATAAGCGGTTGTATGANtgaacccagaaaagtcatgcaaaaacaaacc
tcttgagaatttcttttggtagtaatctgccttgacctatttcccgtact
gtgtaaaaaaaaaGTTCTAGAAAAGAATGAGTAGAATCCaaaagatccaa
ctttgcacggaagcacatGAAAAACccagatttttcgaaaaaaataaaaa
atggctacctgtggacaaaaaagcttcgtaagaaaaaacgcttcaactcc
cactccaaaaaatacttgtccaaaacgatGANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAA
TGACGGTAACTTGTTTCAGTCTGTGTATAGAGATATCTATCCAGATGAGC
TTGAACTCAAAATTGAGCACTCTGGTAAtcatgcttcttttttaaaccta
GATATTACCATCAAAGACgggatatttatttataagttgTTTGATAAACG
GGATGCATTTCCTTTTTCCATAGTCCGAATGCAGCATAAAGATAGCAACT
TGCCAGAatcgattttttattcttcttttgttgATGAACTTCTCAGGATT
GCTCGTTCTACGTTACTTTTCGAGGACTTGAAAGTTAAAGCCAAAGTTTT
TATACAAAGAATGCGATGTCAAGGTGCTGAAAACGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAAgtaattgggtcggacatgatgtccgactag
aatcgatttgggtcagacatttcagcaattgggtcggacaatgtccgatg
tccgaccgctATTTCGAGCCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcatattttc
cttttctactccaacctgattgattttctgtgaatgttcattctagattt
ttgttgtatttgtattgtctttttgttttgtgggtttttctctttattct
ttccattttgagtagttgaaggttttatacttctagactatatatattta
aggtaaagaggttgcgagatttgggttagcgaggcaaaaatcgctaaaaa
gctggtaaaatcgtaatcctcaaaaatcaaagttcAAGCCTCACTGCCCT
tgctcttatcggccaaaatttttgaaaccaacTTTTACATCTTCGCAAAC
gcaattttttccaatcatGTCCGCCATCGCGTTGATCTCGCCTTCCCACC
CGTCTTCGGGAAGGAAATGGCACCAcgctggccaatgaaaaaagagtttt
tttatcaaagctaattcaaaactgtacttttaaagttgCGAATTTGTGCT
CGAAGGTGAGAGCAAGTGAAATTGtatgctttcagtggagtttgtggaca
aaatcagaaagaaattggctggAAAGATTTTCGTCCCAATACGTGttttt
tatcggtatgtagttggaccccccacccccttatcggcccaatgccgata
aaaaattcgaaagttttttgtcgaggGTCCCTAACAGGGGTAACATGATT
tctgagggcaaaagtttttagcaaaaatcgaaatttccaaggcgagagaa
aaaaatgtatgaatttccaaggcaatggAAGTGAAAAAGGCAATTAAAAG
AGTGGAGTTTCTGATGccttttgcaaaagtacatggagtTCATCGGAACT
Tccaaccaccactggaaaagaaaaattatttctgaggctagaaaaaattt
aaaaatgcacgtcgtctgACGGGGagtaacaaaaattttatgGGATGGCC
CATTGGCAGCTTGGGAAATACGTGTTTCCATTATTTCAAGAAATGAGGTG
CATTGATGATGCAAGAAGTAATCAACAAAAGGAACcaataaaagatcaaa
gaaaaaaaCTACAGTAAGTGGGGAAAAATGATTGCTCATACCAAGCTTGG
AGATTTGGCAAACCCAAAGTAACGTTGGCAGGCTTCATGAGTTTTCCTGT
GGTATATAATATGAAGGCTGCCTAGATTGGCGAAaacatgaagaaaaaga
agaaaaactaaaattcaCCTTTCAACCCTTAGAATCAACATTTGATACAA
ATAAAGTTATATGACTAGTTGTTATCCAAGGTCCCAAAAAGCCATTAGTG
CCAAAAATTTAGGCCATTTGTTTTAACCTTCATCATATATggcaatctca
ttggttgaaatttaaaaaagactttccaATGGAGCAAATTACAGAAGCAA
CTGagaagaagagaccactttttttgcagatttcaatataaaaataGCAT
GGGGAATACTTCTGTCGATGTGTATTATGTGTCAACTATGTTAAGCATTT
TATTCTCGACTtgagttgagctagaatctgagaatgtctgtctgtctgtc
tatgtcccaaaactttgaggcagcctggagacttcaaaaattgttggaca
CTAAAATTTAGCACACttttccttgggtgaatatctggagcgtttttttt
catttttcaaaaattttgatttttggggcctggggactagtttttcgcca
aaacgaggctaaaactttggggcagcttggaaacgttaaaaattgtcgga
tttggctgaaatttggcactcTTTTTCCTTGGGCCAATATCTGGGagtgc
ttttttcatttttcaaaaattttgatatttgaggCCTGGTTACAAGTTTC
TCGCCAAAATggctaaaactttggagcagcctacaggcctcaaaaatggt
cggatatggctgaaatttggcaaacTTGTTCGTTGGTTGAATATCTAGGG
GGTCTACAATTCGCCCtatgaatgatttgaagccactgaagttgagtcCA
GTGTGTTGAGCACATTCGACTATTGTTGAAATAGAAAAGAGGTAAGTCTA
GCCTAGCCTAATTGTAAGCtgtctggggggggggggggggggatgaaTGA
ATCAGTCATGGTTGACAAGTGACTCAAGTACCTGCTGCAGAGGAATAGTG
GTacctgagttttaacactacgCAGGTCTAAATAAATAGGCCAAAATAGG
AAATGTCTCAATCATTCAGCTGACAGAAAATGACTGGTCAAGATTTCCTT
TATTCTTTTGTAGGAATCTTTAATAACCTTTAACAATCTTAATCTTGGCA
GTGGTGTTTAAACTTAAGTACATGATAGGGAGGATAAAACTAATAGTCTA
AATCTCATCCAACTCATTATatgttagtcacactagcgaaTCCAGGTGTC
AGAACTGGTCAGAAGtgcaatttttatattttttgacaaGAGCTGTTAAG
TCATTCTATTGCACCCCAGTAAGTGGCAGTTAGAGAGATAATGACTTTGA
TCTAAAAATAGTTTTCCTTTCTCATCTCAGCAAGAACTTATAGAGGCTGA
AATTTAACTTTATTTGTTTGTCTCCCCCATTGAGGCCGACCCTAAAAAAT
CTTTCGTTTCCGGTCCActgggtgacgaaaaaaaagtcATGCAGGCGgcc
gggaaaaatttttttttggtccttttcatgatttctaatatttaataaaa
aaattaggaagaaaaaaatcatctctTTGCTCTGGCTGTTAGTGTTGCCC
CACATTctgtctttatattttttctttcttctttctttcactgaaagaaa
tgtgttgttattaattacaaaaagctgtattttgtgattttttttctcta
agaATCAACTAACTTTTCATTCTAATAAATTGATTTAATATGCataacac
tatttatttgatctttaacgTCCAGAAAGCATgctaaataaacaaacttt
ttgaagagtgTTTATATAGGAATGATGTAACAGTTTGAATGAGTCATGAG
TAaaggtttttataaagaaagtttCATCTGTTATCTATttggtccttata
aaaaaaaaattcggccaggtgaaaaaaaaatttcacccgGCCAGTGGACc
gtaaacaaaattttttttggggtCGGCCTGAGGTATGCATCCCCGAGATC
TAAACTGATGTGGACACTGACCAAGGGATGTCAGTTAATTGGTTATGGAA
TCACAAAATATATTGTTATTTATCACTTGGTTGAGACTAACtcaagaaaa
ttaaattaaaatcgAGTGAGACCACCAGTAAATTTACTAAAGATTTTTAG
TTTCCCTGTGTTCaagctttctttcttttgactAAGCAAAAAGCCTTCTA
AGGTAAATATGTGATTCTGTGCATGGAACCTAAATGAAACAACTTATATG
CTTTGATGTGCTAGAAGTGTTAAAtcctttatttattttcaagcCTTCAC
TATAATAAAACGTTTTGAATTTGTAGATTCACCATTCAAACAACAACAGA
TGAAAGCATGGCAACCTGTTTTAACTGCATCAACTGTGTTACCAATCTTT
TTTCTAACTGCTGTTGTCTTTCTACCATTGGGTATAACATTGCTTGTCTC
ATCGAATGGTGTAAGtcaacaaaaattttaagttgTATGTTCATTGTTAC
CATAACTTGAGTTCACCTCACATTTGCGTTAGAAGAAACAGATTGCAATG
TGGGCAGAACTGACCACTAGATCTGAGATAACAATAACAGaaataaaaat
agcaaaaaactcAATTAGATTTTCATACACTGGTCATGAAATGCCAGCCA
AATAATtatattcactaaaatatttgttattaTTATCTGTCTGATTCAAT
TCAGACGAGgttcttttcatcaaaattgttttgtttttttgttttttctt
caatttttaattcATCACGTTTTACAAtataaagaaactttttgtCAGTG
cacagaaaaaaagacaaagtcAAAAGGACATGCAGAAAGATTGAGCTGat
tgttttttctcttttgattTACTGTACATGCAACTAAAAATCTACACATT
TGCTTTCAGATCAGAGAGAAAATCATTGAATACACAGACAATGAGGCATG
CAGGCAATGCATCACTAAGGATGAAGGCATCACAAGTCCAGATCAAAATA
AGTTCCTAGCTTGCAAAtgtgaaattaaattcaaattgaatgaaaaatgg
GATGGTGACATCTACTTTTACTACGGCCTTGACAATTTTTACCAGGtaat
attttgacaaaacttTAACAATGCAATCATAAGAAAAGCTTTACAATCAG
TACAATTTCTTATTGTTTACGGCTATAACACTATAACACATTGATTGATT
TGAATCAAAATAGCTTTAATTATTGTGAATCAATTTCATTCTAAAGTTTG
AGAATTATGGTATTTGATTGTGAAAAGCAACAGCtttctttgttgatttt
tatctaTCTATCGGCTGTTAGTGTTAAGTACCATTAAGTGCGTGGATTTT
TTAACTGTTGAGGTTGTCAAAGTTCTTATTCATAATGAATGAAGAGAAAT
TTATTCAACCATTTAGAATCACAGAAGATATGTACGCTCAAGAGATGATG
CTCAACTTCATGGTAAACTATCTGATAAAGTAAGTCCCAACTGCGCAGCA
CCTTTTGACAAAGGTTTGGTTGGCAATTCAACACACAATGAGACAAGACC
AATTGTACCATGTGGTGCTGTTGCTAACAGCATGTTCACAGGTAAAAGTG
AACATTTCAACATATTTTACTCCTAGATCATCACTGATCTTTTTTCCTTT
CTCAATATTCGACTTTTAAACTCcatctttttttaatatttatcgGATTA
TTATTACATTGAACTGTTCTGTaaattgacaatttattttattagtCGGA
ACAACTTCCATCTTTTGACTTGCTGCTGTAGAAAAAGCTATGAGTTCATT
GCATTTTATCAGATAGACTTTAATTTATGTACCTTTCTTTTCATAGATGT
TTTCACTTTATACCACGCAAGTGATCTAAGCACAACAGTACCCCTGACTT
CCACAGGAATTTCCTGGAAAAGTGACCGTGAAACAAAATTCAAGAATCCA
TCGCCTATCTCCAAACTTGACACTTTTGCAAAACCAAAAGATTGGAATAT
CCCAATTTCAGCACTCGATAACCAAATGGTCAACGAAGACTTCATTGTCT
GGATGAGAGTTGCAGCCTTTCCTACTTTTCGAAAATTGTACCGAAAATTG
GATACATCAAGCCAGGTTAACAAAAATTATCAAGATGGTTTAATCATTGG
AGAATACACATTGAAAATCGACTACAGTTAGTATTTTTTATAtgggaaat
aatttttcagataatttcaATATGATTCACACATCTGATGTCAATTAAAT
TAAAGACATTTTGTCTTCCATCTCATCTCATAACATCAGTTCCAGTTCAA
AGGTTTTCCCTTCCTAACCCTACATTTTATgaagattctttttttttaag
tgtgAAAATCTGAATTTAAACTAAGCAATAAGGAGTTTTTggtataaaca
aaaaaaaaagtaagttCACTAAAAAAAGTGTTGATATACTAAAAGTTAAT
AATTTCCTCTAAAACAATAATTCTACTATTCTACTATTATAGACTACCCT
GTGAAGAGCTTTGGTGGAAAGAAGAAGTTTATCATAACAACAGCCTCATG
GATTGGAGGAAAGAATTCTTTCTTGGGGACTTGTTACACTGTTGTTGGAG
CGTTATGCTTGGTCTTTGgctttgttttcctttttattcACAAAAAACAC
AACAAGTAAGTTAGTaactcttatttttttgaaaaaataacgtgTTTGTC
GTATGTTTCCCAATGCACTGGATGcaccatgaaaaaaattaacattttga
ataaaatttcctCAAGTTCAATGAGTTGTAACaaagttaatatttttgta
ttaCAAAGAAGGATAAAAAGTGCTCTATAACCAGAACATTTATTTTTCAA
CAAGTAAGAAAATGTTTTACTGTCAGTTCCAcccaaaggattttcaaatg
taaaatgATTTACTTTTactatgaaaaaagtttctcaatAAAAACATAGA
ATCCTTTTGGGAGTATACAAAAAGTACATAGTATTGGtattagaaagaaa
aaagataaattaaatttttggtgGATAGTGTATATCGAATTTGGGAAAGT
GGATCCAAAATTATGTTCAAAATAATATAAAGTTTAAATATTCATGAGTG
CTTTAAATCATTTATTTCGTGCAAAGAAATGACAAATGATGATTTATCAG
AGCTTTTGCAGGAGACTGCAAGAGTGATTAGATTTTACGCAATTAATCGC
ATAAAATCTGAAGCAAACATCTTCATGGTGTCAGCCttggtttaggtccc
aggcaaaaaattaggtcccccgtgagttttaagtccccctaaagattcat
gaaatttttggtAGCCCTAAGGGCTTTCAGCTTCACGAGCTTTAATTTGA
GTAATATAAGCCAACCATTAAGATGAAGTATTCAGTATTTAGCAACCATG
TTAAATGATGAGATTTCAGCTCCCCCAAGTTCATTAGATCccccaaatat
ttgaaacatcttTAGCCCCCACCTTTTTTGGGCTTTTTGGAGGCTGTAAC
CCCCCCCCAAACTATtaggggggctgacgctatggaATCTCAGGAGGAAT
AAAGTCCACTATCAAAGTCTAGAAttaaaaaacctaaaatttgatgaatg
aaaaatcCAAAAGCCTAATCTTTTTTCTCTGATGCAAAAGAAGTCATTCT
TCTGATGTTTGTAGAACTTAggagaaaattgaatttaaattaaaagtgtt
aaaaaacttCTTCATGGTACATgctgtatttttttaatttttccacaTCA
ACATCCACCATAGATTTTAGTTTGTATGCTTTCTTCATCCTTATAATTCA
TAATGAAAATTAATAATTGTATGGTAATGTGCGCCACCTCTGAAAACCAT
CTTCATTTTACCACATCATAAGTCAATTTTGATTTCCAATAATATTCTGT
CTACTCAGGACTTAGTAAGCTTTTCTCATCTCTTCAAACTTGATCATTTT
TAGGGGTAACTCAAGATGATGAGTAAAAGTTACCATTGTTGCCAAACCAT
GAAAATCAAAGGCAAAGTGAAAGCATCTTGCACAATTTATTCCACTTGTA
TGTAGTAAGAAATGAATTGAATTTGTATGGAATAGGTTTTGGATGGCACC
AACTTTACTTGATGTATATTATTTTACCATGCCTTTTTCCGACCGACTCC
AGTCTTCAAACAATATCAAAGGCCtataattatataaaaaatacacCAGA
TTTACATTAACAGTTTAACCAATAGCACAGCACAGCACCTTGTTGatatt
ttgaagaaagaaaaattaaaatttctataTTTTCATTCTATAAGCTTTTC
ATACCtctaaaattttgcagaaatgAATCTGAAAAGTGAGatagaaaaac
ttgaaaattaacTCTCTTTTTTAACTTTAAGACTGCAAGAAACAGTCACT
CAAAATTTCCTTCCTTATGTAGCTCGATTATTCTGAATTTATAAAACAAT
TATCTTCAGCTGATATTATAAATAATTGTTTAATGTCATAATTATTCAAT
CTTCCTGTAAATAAGATGAATTTTTATATTTAGAtcatttaatttttatt
cacgacattaaaaattttcattttaattagatattttgTACAGTTTTCTT
TAAGTGTTTGAtacactaaagtctgtctcaatataatcttcaGTGGATGA
TAAAATAGGCTGTAatttttgtgcttgttgaaagaAACGAGGGTTGAATG
GAACAACAAAacgatttttctgaaatttcacttttgaatatatttttaac
gAGCTCAAAACCGCTATCTGATCCgtattctatcaaaagttacagccatt
tttgtctcagctgcaaattatattgagaaaGACTTTATATTGTGTTTCAt
gttttgactatttttttctgacagtcttttttatttcttcgtaATTCGCT
GTCATCAAGGCAAAAgatccaatctcaaaattagtgtcTGAGGAAACTAA
GAATCTTTCTGTTTTgctaactttaaattttgagattgacctTTTTTCAT
GTAGATGGGATCCCCCTCACTACGAAAAAAGGGCCAAGCTCAAGATTTAA
GGTTAGCCAAACAGAAAAATACCCAGTTTTCTCAGACACTACTTTCGAGA
TTGGACCTTTTGCCTTGTATAATATACGTAAGTCATTTTAAGGGCTAATc
acattttatgaatttttttttttttttcctttattgttaaaagtattatt
tttcaGATTCTGAAGCATTCAAGACGGCTATAAAATATTGAACtaatggc
cattttaatttgtCAGATCTCATGTCACAAAGCCAGGAAAAATATCTTGt
tattaaaagtaataatttatTTCGTCAGGATTTATATATACAttttaatt
ttacaatttttcttttcGTGATTGTAAAGGCCcatctttcaagaaatata
ttTATGTTCATGTTCCGATTGCATTGTTGTTATGATCTCGAGTCAATGAG
GTCTTTGTAATAAATTACCTCAATTGGAAGGATGTTCTTATTCGGATTGT
TTGAAATATACTGTCTGCAGATACCACCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005836-exon-sc0000061-1491911889:214730..214835 | TCONS_00005836-exon-sc0000061-1491911889:214730..214835 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:214730..214835 | TCONS_00005836-exon-sc0000061-1510915933:214730..214835 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:214730..214835 | TCONS_00005836-exon-sc0000061-1575043694:214730..214835 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1491911889:221556..221689 | TCONS_00005836-exon-sc0000061-1491911889:221556..221689 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:221556..221689 | TCONS_00005836-exon-sc0000061-1510915933:221556..221689 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:221556..221689 | TCONS_00005836-exon-sc0000061-1575043694:221556..221689 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1491911889:222139..222324 | TCONS_00005836-exon-sc0000061-1491911889:222139..222324 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:222139..222324 | TCONS_00005836-exon-sc0000061-1510915933:222139..222324 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:222139..222324 | TCONS_00005836-exon-sc0000061-1575043694:222139..222324 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1491911889:222646..222820 | TCONS_00005836-exon-sc0000061-1491911889:222646..222820 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:222646..222820 | TCONS_00005836-exon-sc0000061-1510915933:222646..222820 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:222646..222820 | TCONS_00005836-exon-sc0000061-1575043694:222646..222820 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1491911889:223076..223405 | TCONS_00005836-exon-sc0000061-1491911889:223076..223405 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:223076..223405 | TCONS_00005836-exon-sc0000061-1510915933:223076..223405 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:223076..223405 | TCONS_00005836-exon-sc0000061-1575043694:223076..223405 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1491911889:223722..223884 | TCONS_00005836-exon-sc0000061-1491911889:223722..223884 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:223722..223884 | TCONS_00005836-exon-sc0000061-1510915933:223722..223884 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:223722..223884 | TCONS_00005836-exon-sc0000061-1575043694:223722..223884 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1491911889:225183..226758 | TCONS_00005836-exon-sc0000061-1491911889:225183..226758 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1510915933:225183..226758 | TCONS_00005836-exon-sc0000061-1510915933:225183..226758 | Clytia hemisphaerica | exon |
| TCONS_00005836-exon-sc0000061-1575043694:225183..226758 | TCONS_00005836-exon-sc0000061-1575043694:225183..226758 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:214730..226758 + |
Blast
BLAST of TCONS_00005836 vs. Swiss-Prot (Human)
Match: CC50B (Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 2.271e-83 Identity = 146/352 (41.48%), Postives = 196/352 (55.68%), Query Frame = 1
Query: 85 EKTRRPSNSPFKQQQMKAWQPVLTASTVLPIFFLTAVVFLPLGITLLVSSNGIREKIIEYTDNEA---CRQCITKDEGITSPDQNKFLACKCEIKFKLNEKWDGDIYFYYGLDNFYQNHRRYVRSRDDAQLHGKLSDKVSP-NCAAPFDKGLVGNSTHNETRPIVPCGAVANSMFTDVFTLYHASDLS---TTVPLTSTGISWKSDRETKFKNPSPIS-----KLDTFAKPKDWNIPISAL-----DNQMVNEDFIVWMRVAAFPTFRKLYRKLDTSSQVNKNYQDGLIIGEYTLKIDYNYPVKSFGGKKKFIITTASWIGGKNSFLGTCYTVVGALCLVFGFVFLFIHKKH 1089
+P N+ F QQ++ AWQP+L+AS LP+FF + F+ LG+ L SSNGI+E +YT + C C +G P C C F L E + G +Y YY L NFYQN+RRY SRDDAQL G S P N AP+ + G PI PCGA+ANS+F D F+L+H VPL +GI+W +D KF+NP ++ A P +W P+ L + +N+DF+VWMR AA PTFRKLY ++ NY GL G Y + I YNYPV++FGG K I ++ SW+GGKN FLG Y VVG+LC++ GFV L ++ ++
Sbjct: 8 RGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKELEYDYTGDPGTGNCSVCAAAGQGRALPP-----PCSCAWYFSLPELFQGPVYLYYELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAG-------LPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARIRQG-----NYSAGLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYIRY 342
The following BLAST results are available for this feature:
|
