TCONS_00005807 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005807
Unique NameTCONS_00005807
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length103

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005807 ID=TCONS_00005807|Name=TCONS_00005807|organism=Clytia hemisphaerica|type=transcript|length=103bp
GCAAAAATGTAAGGGTCAAAAGTGATGTGCCCCCATATAGACGAAGAATT
TTTTAAGAAGTAGGGAGAGATtgtaatgtttcaatttttcaacagtttac
tac
Run BLAST on NCBI

transcript from alignment at sc0000059:521472..521574

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005807 ID=TCONS_00005807|Name=TCONS_00005807|organism=Clytia hemisphaerica|type=transcript|length=103bp|location=Sequence derived from alignment at sc0000059:521472..521574 (Clytia hemisphaerica)
gtagtaaactgttgaaaaattgaaacattacaATCTCTCCCTACTTCTTA
AAAAATTCTTCGTCTATATGGGGGCACATCACTTTTGACCCTTACATTTT
TGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003305XLOC_003305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005807-exon-sc0000059-1491911889:521472..521574TCONS_00005807-exon-sc0000059-1491911889:521472..521574Clytia hemisphaericaexon
TCONS_00005807-exon-sc0000059-1510915933:521472..521574TCONS_00005807-exon-sc0000059-1510915933:521472..521574Clytia hemisphaericaexon
TCONS_00005807-exon-sc0000059-1575043694:521472..521574TCONS_00005807-exon-sc0000059-1575043694:521472..521574Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:521472..521574 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005807 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top