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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005802 ID=TCONS_00005802|Name=TCONS_00005802|organism=Clytia hemisphaerica|type=transcript|length=1479bp ATTTGAATTCTCTTTCGTTTGAAGTTAGTACGCTCCAAGAGAATTGTTAT TGAATTGTTATAATATTGTGAAAGAAAATTGGAAATACAAGATGGTTGCG TGTAGCAAACCAATGGTAACAGAATGTTATCTACAGTCAATGCTGGAATT TCAgaaattggttttcaaaatGGAAAATCTTCATTTCCTGATGAGTTCCG GTTCAGCTGATTTTGCGATGATCAGTGAAAATATGGATGGAACAGTCGAG TTCGGAAAAGTGTTCccaaatattttgatgaaagaCATGATCCAATATCG TATGTATCGTCAACCCAATGTTCCGTTCCTCGTTCAAAACAACTTGAAGA ACTGTTTGAAACATAATACTCAGCCCTTTTTCACTATGAAGAAACACACT TCAAACCGATACCACCCTTATCTTGACGAACTTAAAAAACATCGAATGAA CAGAAACAAATTTCCGAAATCGGACAAGCACTTAGAATCAAAGATGATTA AACATAAGCCGTATTATGAACCAAAACAGTTCCTTGAGTTTCTGGATGAC ATGAACGATAATCAAGATTCGGTGTACAAAGGACCTTCGCCTGAGATCGA TCATTTGTCGTTGGCATTCGGTGGATTGTCGGTGTCTGATGATAAACCAT CCAATCAAATCTCAGTTACCACTACTGTTAAAGAACGCCCTGGTCTCTCA AATATATCAAAggtgaaaatgaataaacccTCCGAAGAAAAATCAGTTAC CACAGCTGTCAAACCACCCTCCGGTCATTCAGTTGTACCAACggtgaaaa tgaataaaccaCCCGAACAAAAGTCGGTTACCACTCCCGTTAAAGAACCA GCGGTGAAAATCTGTGAAAGTTAACCTTCTTCTGCTTCTTCGAGAAAAAG ACTTGTTTCTTGTATAATGATCTATGAAGATGAACTCGTCCCTCGTTCAG ATACAAGCCGTGAAAGCGTTCCAACCTCGACCGCCGCTTCCGATGAGGAA ATTCCGATTTCCAATCTTCGACAAGATGCGCAAAAGAAACGAAAATGGGG AAATCAACCTGAAAAAGAAGATATCAAGAAATGGAAAATGACTGAAGAAA AAACCAACATAAGTGACCAAAGAATCGTGGTAAGGAAGACCTTTGGCCGA AAAATGATAATAAAGAGCCAACCCAGTGCACAACGAAAATTGGGTGAATC CAAAAACACTAATGATCGAAAAGCGGACATCAAAAAGGTTTTCATTAGAA AGCAAAATGGAAAATACAACAACAAAGGCGAAAACAACCGTGACCGAAAA AAGAATACAAGAACTAACAACAGTGTGAAAAGACAACGTGACTATCCCGA GGATGAGCTTGCTTCACCATTCTGGAAGAAATCGCGCAATTCCAACAGAA CAGACCGATTCCGTTAGATTATCACTAGAAATATCCATTGAATAGAGTCa ccttttttgtcaatttattttatctaaga Run BLAST on NCBI protein sequence of TCONS_00005802-protein >TCONS_00005802-protein ID=TCONS_00005802-protein|Name=TCONS_00005802-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MVACSKPMVTECYLQSMLEFQKLVFKMENLHFLMSSGSADFAMISENMDG TVEFGKVFPNILMKDMIQYRMYRQPNVPFLVQNNLKNCLKHNTQPFFTMK KHTSNRYHPYLDELKKHRMNRNKFPKSDKHLESKMIKHKPYYEPKQFLEF LDDMNDNQDSVYKGPSPEIDHLSLAFGGLSVSDDKPSNQISVTTTVKERP GLSNISKVKMNKPSEEKSVTTAVKPPSGHSVVPTVKMNKPPEQKSVTTPV KEPAVKICES Run BLAST on NCBI transcript from alignment at sc0000059:391140..392618 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005802 ID=TCONS_00005802|Name=TCONS_00005802|organism=Clytia hemisphaerica|type=transcript|length=1479bp|location=Sequence derived from alignment at sc0000059:391140..392618 (Clytia hemisphaerica) tcttagataaaataaattgacaaaaaaggtGACTCTATTCAATGGATATT
TCTAGTGATAATCTAACGGAATCGGTCTGTTCTGTTGGAATTGCGCGATT
TCTTCCAGAATGGTGAAGCAAGCTCATCCTCGGGATAGTCACGTTGTCTT
TTCACACTGTTGTTAGTTCTTGTATTCTTTTTTCGGTCACGGTTGTTTTC
GCCTTTGTTGTTGTATTTTCCATTTTGCTTTCTAATGAAAACCTTTTTGA
TGTCCGCTTTTCGATCATTAGTGTTTTTGGATTCACCCAATTTTCGTTGT
GCACTGGGTTGGCTCTTTATTATCATTTTTCGGCCAAAGGTCTTCCTTAC
CACGATTCTTTGGTCACTTATGTTGGTTTTTTCTTCAGTCATTTTCCATT
TCTTGATATCTTCTTTTTCAGGTTGATTTCCCCATTTTCGTTTCTTTTGC
GCATCTTGTCGAAGATTGGAAATCGGAATTTCCTCATCGGAAGCGGCGGT
CGAGGTTGGAACGCTTTCACGGCTTGTATCTGAACGAGGGACGAGTTCAT
CTTCATAGATCATTATACAAGAAACAAGTCTTTTTCTCGAAGAAGCAGAA
GAAGGTTAACTTTCACAGATTTTCACCGCTGGTTCTTTAACGGGAGTGGT
AACCGACTTTTGTTCGGGtggtttattcattttcaccGTTGGTACAACTG
AATGACCGGAGGGTGGTTTGACAGCTGTGGTAACTGATTTTTCTTCGGAg
ggtttattcattttcaccTTTGATATATTTGAGAGACCAGGGCGTTCTTT
AACAGTAGTGGTAACTGAGATTTGATTGGATGGTTTATCATCAGACACCG
ACAATCCACCGAATGCCAACGACAAATGATCGATCTCAGGCGAAGGTCCT
TTGTACACCGAATCTTGATTATCGTTCATGTCATCCAGAAACTCAAGGAA
CTGTTTTGGTTCATAATACGGCTTATGTTTAATCATCTTTGATTCTAAGT
GCTTGTCCGATTTCGGAAATTTGTTTCTGTTCATTCGATGTTTTTTAAGT
TCGTCAAGATAAGGGTGGTATCGGTTTGAAGTGTGTTTCTTCATAGTGAA
AAAGGGCTGAGTATTATGTTTCAAACAGTTCTTCAAGTTGTTTTGAACGA
GGAACGGAACATTGGGTTGACGATACATACGATATTGGATCATGtctttc
atcaaaatatttggGAACACTTTTCCGAACTCGACTGTTCCATCCATATT
TTCACTGATCATCGCAAAATCAGCTGAACCGGAACTCATCAGGAAATGAA
GATTTTCCattttgaaaaccaatttcTGAAATTCCAGCATTGACTGTAGA
TAACATTCTGTTACCATTGGTTTGCTACACGCAACCATCTTGTATTTCCA
ATTTTCTTTCACAATATTATAACAATTCAATAACAATTCTCTTGGAGCGT
ACTAACTTCAAACGAAAGAGAATTCAAAT Coding sequence (CDS) from alignment at sc0000059:391140..392618 >TCONS_00005802 ID=TCONS_00005802|Name=TCONS_00005802|organism=Clytia hemisphaerica|type=CDS|length=783bp|location=Sequence derived from alignment at sc0000059:391140..392618 (Clytia hemisphaerica) TTAACTTTCACAGATTTTCACCGCTGGTTCTTTAACGGGAGTGGTAACCG ACTTTTGTTCGGGtggtttattcattttcaccGTTGGTACAACTGAATGA CCGGAGGGTGGTTTGACAGCTGTGGTAACTGATTTTTCTTCGGAgggttt attcattttcaccTTTGATATATTTGAGAGACCAGGGCGTTCTTTAACAG TAGTGGTAACTGAGATTTGATTGGATGGTTTATCATCAGACACCGACAAT CCACCGAATGCCAACGACAAATGATCGATCTCAGGCGAAGGTCCTTTGTA CACCGAATCTTGATTATCGTTCATGTCATCCAGAAACTCAAGGAACTGTT TTGGTTCATAATACGGCTTATGTTTAATCATCTTTGATTCTAAGTGCTTG TCCGATTTCGGAAATTTGTTTCTGTTCATTCGATGTTTTTTAAGTTCGTC AAGATAAGGGTGGTATCGGTTTGAAGTGTGTTTCTTCATAGTGAAAAAGG GCTGAGTATTATGTTTCAAACAGTTCTTCAAGTTGTTTTGAACGAGGAAC GGAACATTGGGTTGACGATACATACGATATTGGATCATGtctttcatcaa aatatttggGAACACTTTTCCGAACTCGACTGTTCCATCCATATTTTCAC TGATCATCGCAAAATCAGCTGAACCGGAACTCATCAGGAAATGAAGATTT TCCattttgaaaaccaatttcTGAAATTCCAGCATTGACTGTAGATAACA TTCTGTTACCATTGGTTTGCTACACGCAACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00005802-exon-sc0000059-1491911889:391140..392618 | TCONS_00005802-exon-sc0000059-1491911889:391140..392618 | Clytia hemisphaerica | exon |
TCONS_00005802-exon-sc0000059-1510915933:391140..392618 | TCONS_00005802-exon-sc0000059-1510915933:391140..392618 | Clytia hemisphaerica | exon |
TCONS_00005802-exon-sc0000059-1575043694:391140..392618 | TCONS_00005802-exon-sc0000059-1575043694:391140..392618 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000059 | supercontig | sc0000059:391140..392618 . |
Blast
The following BLAST results are available for this feature:
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