TCONS_00005754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005754
Unique NameTCONS_00005754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005754 ID=TCONS_00005754|Name=TCONS_00005754|organism=Clytia hemisphaerica|type=transcript|length=465bp
CGGACCCTGAGTCTCGAGAATTCAAAATGGTACCGTTGTTGTGGGACGag
atttgttcaaaaattttcaacttttcaatacaACTTGCTCAAGTCAAGTT
GGCCAACGTTATCAGGATATGTACATCGACAATAAGTTTGTAGGTAACTG
GTAACAAGagaAACATAAGTGATCAGTTAAATACAAAATAACAAAGCATT
ATGTCTAAGAAGCCAGCAGAAAGTGTAAAAGTGGTTGTTCGATGTCGTCC
CTtgaatcagaaagaaattgcaGCTGGCCATGAAAGAATCGTAGACATGG
ACGTTAAAAAAGGGTTGGTGAGTCTTCGCAACCCCGTGAAACAAAATGAA
GCACCAAGACAGTTCACCTTTGATGCTGTTTATGATTGGAATTCAAAACA
GAGAGATTTATATGACGAAACATTCTCAGAGCTTGTTGAATCTGTGCTCA
ATGGCTACAATGGTA
Run BLAST on NCBI

transcript from alignment at sc0000059:122922..135892-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005754 ID=TCONS_00005754|Name=TCONS_00005754|organism=Clytia hemisphaerica|type=transcript|length=12971bp|location=Sequence derived from alignment at sc0000059:122922..135892- (Clytia hemisphaerica)
CGGACCCTGAGTCTCGAGAATTCAAAATGGTACCGTTGTTGTGGGACGAG
ATTTGTTCAAAAATTTTCAACTTTTCAATACAACTTGCTCAAGTCAAGTT
GGCCAACGTTATCAGGATATGTACATCGACAATAAGTTTGTAGGTAACTG
GTAACAAGGTAGATAGTCTTGATGTGATATTTTGAATAGCTATAGCTATT
ATGTATTATAGGACTTGCATAAAAAATAGATTCTTTATAGACCTCATCAT
CAGGTGAAGGCTTCTTCGTAAAAGCGAAAGACATGTATCTATTTTTCGGA
TCCAGCATGCGGGAATAGTGTCAGGACCTGCAGGCGACCTGGTAGGGTTG
GGTATGGGTGTGTTTTGGGTGTGGTTACGTATCAGATTGGCTAGGAATTT
GGTTATTATCAGTTAGGACCCTGCCGACGCACCGGACTTAACGAACACCA
GACATGTGAAAGTCCGGTGTAAAATGAGAATTTTTTTTACCACCGGACAA
TTTCTACACCGGACTTAAGGAAGTCGGATGTCCGGTGTCGGGGAAGGATA
TTTTTTCCCACCGGACAATCAATCAAAACACCGGACATGACCAGTCCGGT
GTGCGTCCGGTGTTTTTTAATTTTTTGTTTCATAAATGTCCGGTGTCCAA
AATTCCCTGTATGCAACACTGGACTGACACCGGACTTATTGCGTCCGGTG
TAGCGAAAGGATACTTTTTGCCACCGGACAAATACACCGGACAGTCCGGT
GCGTCGGCAGGGTCCTTATCAGTTAGGGTTAGGTTAGTAGGGTTGGACCT
CGAAAAAAGCACTCTTTTATGATTTTCTCTTAATACAGTCTCGTCTGTAG
TTTGTACAATATAAATAGCCGTAGGAAACGCTCTTTCGGCATGGATCTGT
GGCACGGTGGTTAAGGCATTGGGTTTCAAAGCATCGGAACTTTGCATTTA
GTGGGTTCGAATCCCACCGGTGGCGATCTGTCGGTAAGTCATTCAGTAAG
TTAGAAAACATAGTAAATAACTCACACAGCACCGATAAGTCAGAAAAACT
ACGAACAAGAGACTGGAAAGTACGAAATAAGTCCAGATCTGTCTTTCGTC
TTTACGAAGAAGCCAGCCACGACCTCATCATCAGGCAGCAGGGCAAAAAT
ATAAGTGCTTGAAAGTGGCTGGGCTGTCTATAAAAGAACACTTGTATTGT
AAACCAGCTTGACTGGAATTTGTGCATTGTTTATTTAATCAAGACAATTT
TTTGCCAACAGCCAATTTGCAAGGGGGTTAAGGGGGTACTGTAAGGCCCC
CTTCACATATCACGGTACGGGTGCAGCCAGGGTGGTAGCGAAGTCAGGCA
AGTTTTGTTGATGTCAAACCAAATGTTTCATTTTTTCGTGAACTTTGAAC
CCTTTTAACTTTTTTTATATGTATGCTAAAGCATTCTGGTTTTTACCAGT
GCGTCTCAAACCGCGATATTTCGAGAGCACGGAAGCGCGTCAAAACACCA
GCTTTTTTAGAGTTTTGTCTCGTTTACCCAAACGCTGCAATCCTGCGTAG
GCTTTGGGCTCAAGACTAGAACCCCCAATACTAGACATTGGCCTGGGATA
CTTTTACTTTTGGGTGTGTTTGAGCGTACCGCTCTGGCAAGAATCTTTTG
ATCCACACCACAATCTTCATTCAATCCATAATTCCTGAAGGAAGAAATGG
ATCAGCAGAGAGATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGCAGCTGAGGATGGTGATAATTCGTCAATGGCTTT
CATTATGTCATTTTCAGTGACTACCATTTCTGATATTTCAGTGGTTTGTG
TGTTGAAAGCTTGATCGTCAGGTGACATGGGTTCACTGAAGACATTAGCA
TATTGATTTGAAAGGATGTCAGCCATTTCTTTATTCTTCATTGTAAGGTT
CCCGTTCCCTGACCGAAAAAAAATCATCATCATCATCAATTTTGTTAATT
GTCAGAGTCGTTTACTCACTGGAAATACGCAACTTTCTGAAGTTTCGTTT
TTTTTCGGTTGTGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAGGGAACGCTTGAG
ACGAATGTTTGGGAAATCAAAAAGACAACTTTTGTGAGAATGTTGAGTTT
TGTTTATATGGCTGTTTGTGACGCACTGTTTACTAATGGAAAGCCTGTGA
TCTCTCAGCTTTCCAGCGGTGTATAAAACTGTGGAGGAGGACACGGGCTA
GTATGCGTGTCTGAATTGAAAAAGCGTGTGTCAAGCAATGTTCGATCGAA
GAAATAAGTTTTCACCAATGTCTAAACTTTTGACTATATATCTAAATAAA
GAATTAGTAAACCTTTTTAAGATCTGTAAAAAGCTCTCTCTACTCCCAAA
TAGTTCTAGAATAAACCCTGAAAAACTGAGATACTGTAATCTGAGATAAT
TGATAAAATATCCAATTGTAAATAAAGGTTGAAGATGAGAATTCACGAAG
AAAAAACAAACCTTAAGCAAAGAAATTGCCTTTATAGCTCATTTTTCCAT
GAAAAATAGAAAAGCTTTTGGATATTTGAGTTCCCCAAACATTGTAGAAT
CTTTTAGTACACATGGCAAAAGAAAAAGAAATAATTAAGACCTTTATCAA
CTGAATTCTTTCCATACCGTGCGTGGTCCTAAATCCGACAGCCCTGCCTA
AGTTCTAGTTCTGTGGAATTATCACATACTGTAATACATTACGTACATTT
TCGTGATTTTAAACATAAAGGATGAAATAAAATAAAGAGTTAAAAATATT
AGCACAGTGACGCTGGTGAAAATGTGGAAAGCACAAAAGTAGGTGTAGAC
TCAAAATGTCAAAGTGTAAGAGTGAACTGGGACGAGACGATGACATGCCA
AGCTAAGTAGAAAAATTGTAGGAATTATAGGGAAAAATATTTGTAATTTG
GAAATTTTTAAAAACTACCGTAGAGTCGTCTAATCTCGACATACGTCTTG
CAATCTCGACATAGCTGTAGGCTGCTCTTCGAAATAAAAAATCAAACATA
AACAAATACATACCAAAGTTATCAATCAATCACTAAATTGTTCTCTCTCT
CTATCCACGTCACAGATTGTTAATATANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCAATGGTGATGAGGCCAGCAGTGCTAAGTAAAAAAGAAAACACGGCGC
AAAAATTGTTCAAACAGAAGACAAAGCATGGGGACACAAGACACGAAGAG
TAAAATTGCAAGAGACAAAAAGGACTAGCTCAGGATAGAAAAAAGTTAAA
ATCAGAAAGAAATAAAAAATAAAAAATTCCACAAATTAAAATTCGTAGTT
TGAAATGCTAAGGCTGAATTATCAGGGTCTTCTTCATTGACGATATGGGT
TGGTAAGGCATTCCACAACCTAATTGTTGAGGGGACATAGCTGTATTCGT
GCATTTATTGGTGTAATCTTTAAGTTAGCGGTACGAGCACGACATACAAG
AGAAGATAAACAAGCAATTCGACCGTGTAGAATCTTATGCATGTAGTTCA
GTTTAGTTTCAAGCCGTCTTTGCTGGAGGGTCTTATTAAGGTTAAGATTA
CGAATCATGGTGGTTGGACTACCGGAATATCTCAAATCATTACATATAAA
TCTGGATGCCTTGCGTTGGACCATTTCTAATTGGTTGATGTTTGCTGTGG
TATGAGGATCCCAGACAACTGATGCGTATTTAAGAATCGGCCTCACATAG
GTACAATAAGCTTGTAGCTTGATTACTTGGTTACATGTACGCAGGTTACG
CTGGAGGAAGCATCTGATTTGGTTGGCTTTTTTCGAGGTGTAGTTGACAT
GGGTATTCCAAGATAACTTTTTGTGTATAAAAACGCCAAGGTATTTTGCT
GAGTCAACAAGCTCAATGATCTGGTTATGCATGGAATAGTCAGATAGGAT
GATTTTGCGCTTATTGGTGACTCTGAGGACCTTGTATTTGTCTGGATTGA
ATTCCATGGACCAATGCCTTTCCCACTCAATCAGATTATTTAGATTATGT
TGAAGTCGATAAGCGTCATTGACTGATTCAATTTTTCTGTATAATAGAGC
ATCATCTGCAAAAAGACGAATTTGAGAGTTCACACACAATGGTAGCTCGT
TTATATATACTAGAAATAGAAGTGGTCCCAATACTGTCCCTTGGGGAGCA
CCAGATAATACCATGGCTTTGTCTGAGCTCTTGCTGTTAACAACTACAGT
TTGCGTTCTGTTTGCAAGGTAATTTCTAACCCAGGAGAGAGTATTACCTC
TTATTCCGTAGCGATCAAGCTTAATGCACAGTTTGTCATGGTCTACCTTG
TCAAATGCTTTGGAAAAATCAAGCAAGATGGAATCGATTTGACTTCCCTC
ATTAAGCGATTTTGCAAGGTCATTAATGGTGAGTAAAAGCTGAGATTCAC
ATGAACGATTTTTTCCGAAAGCCATGTTGCGTATCAGTTAGTATGTTGTT
TTTATCAAGGTGGGAGATGATATTACTGTGAAGAATATGCTCAAATATCT
TGCATGATACTGATGTTAGGCTTATAGGCCTGTAGTTTTCAGCTTTGGCT
CGATCTGTTTTCCCTGGTTTGAAGACTGGGGCAACCAAGGCATGACGCCA
GTCCTTTGGAGTCATTGAGTGCAGCATGGATGCCTGCATTACCAATGTTA
GTTCAGGTGCAATTTCATTACCAAGCTCCTTTAGGAATTTAGAGGAGACA
TTGTCTGGACCAGATGCTTTGTTTGGGTTGAAATTTTTCAAAAGTTTCTT
GACTCCTGCTATATTGATAGTTATGTCTGGCATAGTTATGCAACGTTGAC
CAATGAGTGGAGGGATGCGTCCATCTGGTTTAGAAAAAACACTGGGGAAT
TGATGGTTCAGTATGTCTGCTTTCTTTTTGTCATCAATTTGGATGTGACC
CTTATCATTTAGAGGGGCAACACCATCATTATCACACTTACAAGATTTTA
TAAATGTAAACAGTTTTTTGGGATTGTTGTCCTCTCCGCGATCAACACAT
TTCACTACATAATTGTTAAATGCTGCTCTACAGGTTTTCCTTGATTTGAC
GGTGAGTACTTTAAATTTGTTTCAGTCTTCTTGTCTATTTGTTCGTTTAG
CACATTTATAAGCTCTTTTTTTCCTTCTGCAAAGTCTTTTGCATTTGGTT
GTGATCCATGGTTGCGTATATCAAGGTGAAGTTGTTTTTGAAGGAACAAA
ACTCATTGAAGAATCGACAAGCATTTTGAAACTAGACCATAGTTGATCAA
TTGGTGTGGTTGTATCGTTGTTTGCCATGAAGTTGGTCGTTTCGGAGTTA
ACATGGTCTTTTATCGTGTTTAGGTCTGCCCTTTTCCATAGGTATACTTT
CCTTTTAATAGATTTTGATATCTTTGGATGACAGGTAATATCAACCATCA
CAGCTGTTTCGTGATCACTGAGACCAGGATGAGGGATGCAGTTGTTTACA
AATGATGGTCGATTAGTGGAAATAATGTCAAGTATATTATTAACTCGGGT
CGGGAACAAAACAATTTGCTCAAGGCAGCATTGGTTAAAGGTTTCTAAAA
ACGATTCATTGATATCTTTCTTGTAATTATGATCAATGATGGCATTGTTT
ACCCAGTCAATATCCGGAAGGTTGGTATCACAACCAATCCATAGGGGGCA
GTTTTTAAAGGAAGAGTTTAGAGATTTGATTTCTTCACAGATGAATGTTG
TTTCACCAATTTTCGATTTTGGAGGTCTGTAGCAAGCTGCTATGATGACT
GGTCTCTGGTGTGTTTGAACCTTGATTGCAATAAATTCACATTTTTTGGA
TTTCTTCACTTCCTCAATGACCAGGTCTTTCTTTGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTGGTGGAATGAATTCAGAGTCCTTGATGCTACTGT
CAAGATGAGTTTCGCTACCAATAACAATATCAACATTGTCCTCAAACAGA
GCCTGTTCTATTTGCTCCTTTTTTTTTCCCAAACACTTTGAAAGTTTATG
CACCAGTATGCACATCAGTTTAATTTGTGTTGGAGTTCTTTTAGGAATAC
CTCTTTGTGGAGATAGGTTAGAGTCAGTTGATGAATCAAGTGAGCTATCA
AAAAGTGATGGGTTGATGTTTTTCAATCCACAGTTGCAGCATTCTCATTC
CAGATCATTGTTTGTCTGATAGATATCATACATTACACTGTTCATTTGGA
TGCAGTGTGCATGGAACCAGCGATTACAAGTGTCATAGGCAATTGCATTT
TGTCCCCATCTGACAGCTGAAGAACATTCACCACAGGGAAATTTTACAGG
TGGGCCAGGATTGATCTCGATTTGACCACTCAAGACTAGTAGCAAGTCTA
TCAAGTGAGCAGTTGATTTTATGTAGGATGAGTTTGTTGAGTAAGCCTGG
AATATGGAAAATAGGACTTCTTGGTTGAAGCGTGTCGGAGGGCAAAAGCT
CAGATCAGTTACATTAACAAAGTGAGGGTACAATCTTGGTCTTGACCACA
AAGTGGTGTACAAAAGAAAGATCAATAATTTGAGCAATTTCATGATGAAA
TCAGAATAAGAATAATAGATACCTGATCAGCTGCACTTTAGCTCCAAGCT
AAGAGTGCAGCCGTTCCAAGGTGATTAACAAAATGCCTGAGCTGACCAAG
ACACAGGACCCTGCTGCTCGAGGAACGTAATAATAGGAAGAAAGTTATAC
CTGTGATGTCCAGGGCTAACCTGGTGTGTAAAAGCTGAGGGGTCTTGTTT
CTAGACAGCAAATTGGTAAATTGCTGAACCTTTTTGCAACATTTCAAAAT
TTGTTTCTGTGTGGGAAAAAAAAAGTTGCAACTATTGATGAACAAATGTT
TCTGGAAATGGAGGAAAACATTGTTGAAGGCTGAAACTTTGTATGTTTAT
CAGAAAAAGGGTGACGAATTCAAAAATCACATTCGCTAATTCTAGTTCTT
TCATTTCTATGTAGTTTTTTTCACTTTTTTGCTTCTTTAGCATGGGAATG
TCCCAAAAAATTCCTTTTAATTTCTGCCGAAACAGGCCGAAATGGATTTT
CTTTTGATTTAGGGTTTCTCCTTTCAGGAAAATTTATTCTTTACATTATA
ATTTTTTGCTTCTCTATTTCCAGAGGCCCCTTCAAAATGGCCCCTTTTTT
GACTCATTTCAACCTTTTCCAAGTTACTTCATACGATGTCTTCTTTTGTT
ATTTTCATAAATATACTAAATATTTTACAAATATTTTTATATAATAACAT
TCTAACACCATCAAAGAATTCTCCCTCCAAATTTCAGGTCTCTAGCTACT
GTATATACACTAGAAAAAGAGATATATGCAAAATTAAAGAAGCATGACTG
GAATTACAACCACTTATCCTCTGGAGGCTTATGACCCCTCATTTTCTTTC
TTTTTTAAAGCTCTACAAGATAATAGGTTTTGAAAAAAATTTAGATTTCT
GGAGTTGCTATCCAGGGGGTGCATGGGCGATACCCCCCCCAGAAAGCTCT
TACATTTTCAGTTTGTGAGCCATCTTATTTTCCTTGAAATGGCTGGATAG
CCTTGAATTAGTAGTATCCAAAAATGGTATGGTTTAAATATGGAAAATTA
TCTATTTTTTTTTGCTGTGTCAGCAGTTTTTCAGCATATTTACCCATCTT
AAAAATTAATTATCTCGAGATTTAGACATTGAAATTAACAAACCATACCA
TTTTTGGATACTACTAAGTCAGGGCTATCCAGATGTGGGAATGATTTATT
CTGAAAATACTCGTTAGAAAATGTTGATGTCATTCAAAAACTCCCAAAAC
GCCTATTTTCGCCTTAAAAATGCAATTTCTTGGCACCAGGATGTCGAAAC
TTAACAAAATAACCCCATTTTCTTTATCTACTTTTCACACTGAATCCGTT
GGTAGCCTCAGAGATTTTCAGACTTCGAAAAAACCGTTAGTAAAGGCCCT
TGATAAGTTCTATCGATTACCTANAGAGATTTTTAGACTTCGAAAAAACC
GTTAGTAAAGGCCCTTGATAAGTTCTATCGATTACCTAAAAATCGATTCA
CTCGAAAACTGCAGGAGATTCGAAGGGCAAATTTTTCCTATTAGGAGCTT
AGTAAGTATCAAAAATTTGCCCTGATCTAAAAGGTTTCCTAAGAAAACCA
ATTTTAAGGCCTTTTCTGAATCTCGGACGCTGGTCTATTGGTTTTATCAA
ATACGTTTTCTACATTTCTTAGTCTTATCAACTCATACAAGAATTTCAAA
ACATATTTATTTTGTGACAACCAATTTCTGAAACGCCAACTTTATTCAAG
AATTGTGACCTATTCTCTCAATAAAGCCCTACGTATACCATGTATACCAT
GTACAGATGTACCATGTATAAATTTAATGAAAGAATTTTTTAACAATAAA
ACTGTATCAGTAAAGACTTTCCACCAAATGGATTTTATCAATATGCTTTC
TAAATAGCGATAGAACAGTGACAAACTTTTAAACTCAAGAAATGAACTGA
TTTCAAGATGATGTCATGTAAATAAGTTCACCTTGAAACTTGATGACATT
AAAGGACTTAATTAGCTTAACTTAAGTTTAAACTGACGTCAATTTCTCCC
TCAAATCTTTTGCTTCAAAAAAGTTTAGTAATTTTTATTGATATGAACTT
CCATGTCAATACACGCTTTAAATACTGGCAACTTGTTTTATTTTTAGAGA
AACATAAGTGATCAGTTAAATACAAAATAACAAAGCATTATGGTAAACAT
TATTCCTTTGTTGTTTTTCATTCATTATTTTTTTGGAAAATATTTCTAAA
CTAACACTGGTTTGAAAATTAAAAGAATTAAGCTATAAGAAAACTAGATC
ATTCATAATCAACTTTTATGTAAGTATATTTTTGGATAAATGTTTTCAAT
ATTCTCGTTGCAGTCTAAGAAGCCAGCAGAAAGTGTAAAAGTGGTTGTTC
GATGTCGTCCCTTGAATCAGAAAGAAATTGCAGCTGGCCATGAAAGGTAT
ACAACAATCCAAACACTACCTCTTCTTCTGTCATTGATTGCTAATATAGT
CTGACTTTTTTAAAGCAACAATGTGTATTTCTGCAATATGTTTCGTTTCT
ATCTAGCCTGTTGTAACTCTTTTTTCATCTTTAGGCTAAAAACAAAAAGC
AAAAACAAGTCACAGTACAGTTGAAATTCACAAAAAAAACATAATAATTG
ATTTAAAAAATTATGATGACTTTTACTCCACACTTACACACTTACAAAAT
AAACACTGTCCTTGTTTAGTCTTATATATTTTTATACGAACTTTGATAGG
CCAGAAATATCGATTCAAATAATGTACCTTATCTTCTTAGAATCGTAGAC
ATGGACGTTAAAAAAGGGTTGGTGAGTCTTCGCAACCCCGTGAAACAAAA
TGAAGCACCAAGACAGTTCACCTTTGATGCTGTTTATGATTGGAAGTAAG
TTTTTTGAATAATAAGTTTATGGAAGCCACTTTTTATCTTTTTCAAGGTA
TTTGAAAAGCTAAAGTGCATTTGCTTTTCAAGTGTGCACTAATTCATTTT
TTGATGTCATTTTTTAACCAATGATTCAATTTTAACAAATTATACTGTTG
AAAAGATAATTAAAGAGTACTATAATTTTTGAAAAAAGTAATATGTCCTT
TGATGGTAAAAACTTTGGTGAAGAGGTTCTTTGAAGCCTCCTGGTTTAGC
TATATGATTATTTTTAATATAGAAATATTGAATCAAAAAATTACAGCCAC
TAGAAGGTAGCCTGTTTGAGTAAAATTACCCTGTTTTTTGCTGTTTTTCA
CTTCAACGGCTCACTTTCTAGAGGGTACAACTTTCAATGCCAGTATTCTA
TGGCAAAAATAAGACGTAGTCAAAATCAGCAGGCTTCAAAGTACCTCTAT
CGCAAGATATAGCAAAAATAAGATTTTTAGCAGCAATTTTTTTCTTCTTC
GCTTTTAATCTTCAGTTTGTAGAATTTTTTTGATTACTTTTCTCAAAAAT
TAAAATGCTCTGAATTATATATGTTAGAATTGAAGAGTAAAAAAATAACT
AAATAACAAAAATTAGTGCACGAAGCGAATGGGCTTTGGTTAGCTTTAGT
TTTAGCTACTTGCAAGTACCGTTTTGTTAATGAACTGTTTCGACCATTTA
AAGATTTTTTTTTCTCAAGGTCTTTTTTACAATACCAGTTTTCAAACTTG
AAAATATAAAAATGAATGATGCACATTAAAAGTTTATATTTTTAAGATAT
ATTCGTTGCAATCATTTATTGATATGAATTTTTACTTTATTTTGCAGTTC
AAAACAGAGAGATTTATATGACGAAACATTCTCAGAGCTTGTTGAATCTG
TGCTCAATGGCTACAATGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003266XLOC_003266Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005754-exon-sc0000059-1575043694:135735..135892TCONS_00005754-exon-sc0000059-1575043694:135735..135892Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1575043694:124551..124595TCONS_00005754-exon-sc0000059-1575043694:124551..124595Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1575043694:124297..124379TCONS_00005754-exon-sc0000059-1575043694:124297..124379Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1575043694:123848..123952TCONS_00005754-exon-sc0000059-1575043694:123848..123952Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1575043694:122922..122995TCONS_00005754-exon-sc0000059-1575043694:122922..122995Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1510915933:135735..135892TCONS_00005754-exon-sc0000059-1510915933:135735..135892Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1510915933:124551..124595TCONS_00005754-exon-sc0000059-1510915933:124551..124595Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1510915933:124297..124379TCONS_00005754-exon-sc0000059-1510915933:124297..124379Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1510915933:123848..123952TCONS_00005754-exon-sc0000059-1510915933:123848..123952Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1510915933:122922..122995TCONS_00005754-exon-sc0000059-1510915933:122922..122995Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1491911889:135735..135892TCONS_00005754-exon-sc0000059-1491911889:135735..135892Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1491911889:124551..124595TCONS_00005754-exon-sc0000059-1491911889:124551..124595Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1491911889:124297..124379TCONS_00005754-exon-sc0000059-1491911889:124297..124379Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1491911889:123848..123952TCONS_00005754-exon-sc0000059-1491911889:123848..123952Clytia hemisphaericaexon
TCONS_00005754-exon-sc0000059-1491911889:122922..122995TCONS_00005754-exon-sc0000059-1491911889:122922..122995Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:122922..135892 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.14661	14.0548	5.64887	4.29842	34.9483	23.3339	14.9665	20.35	10.744	12.8742	12.0748	11.9063	6.7283	7.08312	5.19374	7.68493	4.68158	8.21072	8.10254	11.4077	8.57547	5.88208	5.40256	8.23434	34.0735	28.8162	8.74126	4.46165	8.46002	7.05225
Blast
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BLAST of TCONS_00005754 vs. Swiss-Prot (Human)
Match: KIF3B (Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.524e-30
Identity = 57/90 (63.33%), Postives = 73/90 (81.11%), Query Frame = 3 
Query:  201 MSK-KPAESVKVVVRCRPLNQKEIAAGHERIVDMDVKKGLVSLRNPV-KQNEAPRQFTFDAVYDWNSKQRDLYDETFSELVESVLNGYNG 464
            MSK K +ESV+VVVRCRP+N KE AA ++++VD+DVK G VS++NP    +E P+ FTFDAVYDWN+KQ +LYDETF  LV+SVL G+NG
Sbjct:    1 MSKLKSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNG 90
The following BLAST results are available for this feature:
BLAST of TCONS_00005754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF3B2.524e-3063.33Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3... [more]
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