TCONS_00005720 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005720
Unique NameTCONS_00005720
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005720 ID=TCONS_00005720|Name=TCONS_00005720|organism=Clytia hemisphaerica|type=transcript|length=141bp
CCTAATAAACCTGCAAATTATGATAATTTACTGGGTAACCCATCCATCGA
AAATGATGAGAATGTTTTTACAATCAAGCATACGAATTATGAAGAGGTCT
TGTGTATacttaaaaaactgaaaaatgattGCTCAAGCGGG
Run BLAST on NCBI

transcript from alignment at sc0000054:818574..818714

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005720 ID=TCONS_00005720|Name=TCONS_00005720|organism=Clytia hemisphaerica|type=transcript|length=141bp|location=Sequence derived from alignment at sc0000054:818574..818714 (Clytia hemisphaerica)
CCCGCTTGAGCaatcatttttcagttttttaagtATACACAAGACCTCTT
CATAATTCGTATGCTTGATTGTAAAAACATTCTCATCATTTTCGATGGAT
GGGTTACCCAGTAAATTATCATAATTTGCAGGTTTATTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003245XLOC_003245Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005720-exon-sc0000054-1491911889:818574..818714TCONS_00005720-exon-sc0000054-1491911889:818574..818714Clytia hemisphaericaexon
TCONS_00005720-exon-sc0000054-1510915933:818574..818714TCONS_00005720-exon-sc0000054-1510915933:818574..818714Clytia hemisphaericaexon
TCONS_00005720-exon-sc0000054-1575043694:818574..818714TCONS_00005720-exon-sc0000054-1575043694:818574..818714Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:818574..818714 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005720 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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