TCONS_00005649 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00005649
Unique Name	TCONS_00005649
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2157

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000054:373997..379980-
coding sequence from alignment at sc0000054:373997..379980-

transcript sequence

>TCONS_00005649 ID=TCONS_00005649|Name=TCONS_00005649|organism=Clytia hemisphaerica|type=transcript|length=2157bp
GGGCTCGATTATTCAAAGATATGTTATCCGATAATAGACTAATCCACGAG
TAAATGTGAAGATAAGCAAGTCAAAAAAAGATGGCCGACAAGGTCAGGAG
GCTGACATTCAGCACCCCTGgtttcttcaaaaatttggtCAGTAAAACGA
CACAGAATGGGCAAAACCACGATGAATCGAGTCGTAGAACGCTGAGTGAC
CCTGGTGCAGACTATATTCCTTCATATAATCAATCTATTCAGCAGGATCT
TGACAATTTAGTGTCTGAAGATTCAGGGAATTTAAGCAGTCCGGAAGTTG
AACAACAGAGTGGTCTGATAGCAAATTCTTCATTTCTACGTTTAAATAGA
gctcattggaaagataaatcaaaattcaatcatTGTCATAGATGTGCGAA
GCCATTTGGCTTTGCAGAGAGGAAGTACAACTGCAGAAGATGCGGGGAGG
TATTTTGTGAGAAATGTTGTCAATACCGCAAACGGTTGAATGCAGATTGT
CAACCTGATCCTCAAGGAAACATCCATAGGGTATGTTACAATTGCTCTGA
CCTACACACACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAATTCA
TTGAATGTCGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGATCGA
CTGGTGACTGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGAAAAA
CTTCGCGGATTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAAACTC
AAAAGTGGCTGGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAATCT
AAATTCACCATCTTTAATGTCAAACATCATTGCCGTGTATGCGGGTCAGT
ATTTTGTCGTTTCTGTTGCAAGAACGACCTGTTGTTGTATTATGACGAGC
ATGGACGAAGTACAGCTCGTTTGATCAACGTTGTTGGCTGTCCTGATAAA
GAACCCACCACGTGCTCCTATCTCCCTGTCTGTATACTCTGTCATGCTGA
TCTAGAAGAGTACCAGGTACAGCAGTTCCACCTGATCATCAACGAAGTGG
ACGGAGAAGAAGGGAACATCGGACATGTCTCTCTCATCCTGGAACGATTG
AGAAACGTTGAAAGAAAGCTGGAAACGACCTTACCGCGATTCCAAGAGAA
AGTGGAAGCTTATCTGTACGAACAACAGTACGAAACTGTGGCTGGTGAAT
CCAAGGTGACGGACTTTGCAAAACTTCAAGGAGATATCTCAGACTTATTT
TCCAAGTACACGGCCATCATCCAAGGTTTGAAGCAAATTCAATTGACTTC
ACCTACGGAGATTCgaatcatgaaaaacattgttcACGTCAAATGTGCTT
CGTATAATGATCAAATGAACCtcttcaagaaattgaaatcaACTTTGAAT
AAATCACTACCAGCTGAAGAACTCGAACAATTACTTGAATACACCAATAC
ACAGGCTATTAATAATACTTATGTTACCGCTAGACAGCTTGGGTTCGAAG
CATTGGCTCTAGCTGAGAAATACGACTTTGATACGGAGATAGCTGAACGG
CTGAGTGAGATTGACGCCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCT
TTCCACGGGAGATGACTGGGCAATCCACCATAAAATATTGAACTCCTTAC
TGAAAGATCAACTTGCTAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCC
GTTCAGAAGCAAGGTCCTGAGTATGTGCGTAGGTTTTTGATCCAAAGAAC
GTTCACCCTTGTTTATCAGATCTCGACAGCGTTGAAAGCCAAATCTTCCG
AAGAGAAATTCCAACAATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGAT
TTAAATGAAATGGTCAACCCTAATTGTTACTGAAACTCACTCAATTCAAT
GTTTTGTTGACTTTCTCACGCTGAGAAGAAATCCAGTTCTAATGCATTCC
ACCTTATTTTTATTGTACTGGGAAACTGTTAGCAAGAAGGTTGCCAACAA
TGGTAACATGTGACTGCGTTTGGAATTGTTCATGTTTTTATGTTGTCTTT
GcttatttttaaattgaaattatcAAATTTGGGATGTGCCAGTCAGTTGG
GTGACGGGCTTTAAAAAGGATAATAAGAAACACATTCATATACACAATAC
ACAGTAG

Run BLAST on NCBI

protein sequence of TCONS_00005649-protein

>TCONS_00005649-protein ID=TCONS_00005649-protein|Name=TCONS_00005649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=600bp
MADKVRRLTFSTPGFFKNLVSKTTQNGQNHDESSRRTLSDPGADYIPSYN
QSIQQDLDNLVSEDSGNLSSPEVEQQSGLIANSSFLRLNRAHWKDKSKFN
HCHRCAKPFGFAERKYNCRRCGEVFCEKCCQYRKRLNADCQPDPQGNIHR
VCYNCSDLHTQALGECKSLTEEFIECRKNKRIIVCEELDRLVTGFADNVR
PDQKLKNFADSLLGIKVPEWQKTQKWLESQEVEWCTKCQSKFTIFNVKHH
CRVCGSVFCRFCCKNDLLLYYDEHGRSTARLINVVGCPDKEPTTCSYLPV
CILCHADLEEYQVQQFHLIINEVDGEEGNIGHVSLILERLRNVERKLETT
LPRFQEKVEAYLYEQQYETVAGESKVTDFAKLQGDISDLFSKYTAIIQGL
KQIQLTSPTEIRIMKNIVHVKCASYNDQMNLFKKLKSTLNKSLPAEELEQ
LLEYTNTQAINNTYVTARQLGFEALALAEKYDFDTEIAERLSEIDAVCFQ
ELKKFVLSTGDDWAIHHKILNSLLKDQLAKKKLVSPSQRAVQKQGPEYVR
RFLIQRTFTLVYQISTALKAKSSEEKFQQSKEALKVLLNDLNEMVNPNCY

Run BLAST on NCBI

transcript from alignment at sc0000054:373997..379980-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00005649 ID=TCONS_00005649|Name=TCONS_00005649|organism=Clytia hemisphaerica|type=transcript|length=5984bp|location=Sequence derived from alignment at sc0000054:373997..379980- (Clytia hemisphaerica)
GGGCTCGATTATTCAAAGATATGTTATCCGATAATAGACTAATCCACGAG
TAAATGTGAAGATAAGCAAGTCAAAAAAAGATGGCCGACAAGGTCAGGAG
GCTGACATTCAGCACCCCTGGTTTCTTCAAAAATTTGGTCAGTAAAACGA
CACAGAATGGGCAAAACCACGATGAATCGAGTCGTAGAACGCTGAGTGAC
CCTGGTGCAGACTATATTCCTTCATATAATCAATCTATTCAGCAGGATCT
TGACAATTTAGTGTCTGAAGATTCAGGGAATTTAAGCAGTCCGGAAGTTG
AACAACAGAGTGGTCTGATAGCAAATTCTTCATTTCTACGTTTAAATAGA
GCTCATTGGAAAGATAAATCAAAATTCAATCATTGTCATAGATGTGCGAA
GCCATTTGGCTTTGCAGAGAGGAAGTACAACTGCAGAAGGTATGGAAATT
TTGAAATTCTTTTCTTTATACCGTGGCCTAAATCCGATGGGGTCTTTCAA
AGATACAAACTAAAATAACAGCGAACCTTTCCCTGTGATGCAATGAAGAT
ATTAAAGTGTCAATTAAACTGAGAGATTTGATACACTGAACTAATTGAAC
CAAAACATTAATTGCTTCCTACGACCCTGTCTGCCGATTCCCCGGTGCCC
GGACAATCCAGGGATTTTAACATTTATTTTGAAACTTAGTGCCCCGGACG
CCTCAGACTTGGTGCATTGTTTGCGCTACGCACGTCAAGATAGTGAAATA
TGCCTTATTGGCACTGTGATGTGCCGTACTGGCCGGGTGGCGTGTATTCC
TGATTTTGCGGTACATTTAGATGGTCACGTGACGTGCCTCACAAGTGTTT
CAACCGGTATTCCAACGAAGCCATATTTTGGTTTTCGTTTCACGTCACTC
GCGCGGCAAGTTACACACTTGTTATTTGTCAATCCCATCGGGTGATAGGC
GGTCAGGCGGCGGGCGTTCTATAACTCTCCAATTGACGTCCGGTAATTTT
GAATGAAAACGAAAGAGTTAAAAAGGTTGCGCTATCAGTGAAAGTTATTG
TGACATGTTATGACAGAAAGTATGATTGATAAACTTGGTGGAGTTATCAA
AATAAATTTGTTGTCAAAGAAATTTAACAGTATATAAGTGAAAATACAGG
CGAGATATCAACACATTTTATTTTCATACTATATATATAAAACAGGGATA
AAAATATCAAGAAATCAATCAATCTTTCAAATTCAAATTCAGTATGTGAA
TAGAGCAGTAAAAATTGAAATGAAAATAGAGGGATAATGATAATTGAATA
CTATCCACTGATAGATCTGCGGCATTATCATAAAGCTATGCCTCCACTGA
TACAAGTTACCCGATCTAATTGCGACTAAAGAACAATTTTAGATAAAAGT
TGTATTTTGATAAGCCTTTCTAACAGGCAGACAGGCTTTATTCCCTGTAT
ATACTACGGAAACAAAAATCAGAGATCGGCTAGTGCATACTGATGTTGTT
TGTTGTTTTTACTGAATATCACTCGTTGCCGGACAACATCTGTTTCAGAA
AACTTGCACAACCATCAAATGTATTATCAAGCTTTTTTTCGATGGGACTA
GATGGTTGGCATCTGAAATATCTGAAACATTACNCAAATGTATTATCAAG
CTTTTTTTCGATGGGACTAGATGGTTGGCATCTGAAATATCTGAAACATT
ACATTAGCGAGTAATTTAAGTGCTGATTTACCGTCGTCCTCAGTCAGTCA
GGATCTAGTCAAATTAGAACCTTACCGTCTCAGGCGCAGAAAAACACACA
TACATAAACTCGGTATTAGCGGTCATGGATAAGAATTTTCCATGTATTTT
CCTTAAAAGCTGATCGAATAGCTAAGGGTTGGTTGGTGTTAGAAAATTAG
AGACATATTTTCCCTGCATAATACAGACCTTTTCCATATCACAATGTCAT
ATTTAGTAATTAAAAATTCCATCATCAAAACAACATAATGATGCATGAGT
CGGCTGAAGTTTATTCTACACAAGATCGGGATTAGGTACAACAGCTGCGT
GCATATTTCTTAGCTCTCAAATATTTGGGGTCAGGATGTAAACAAACACT
CTTGTGTCCGCATTTCCTTGGGAAAGTACCTTATTGGAACTAATTTTTGT
GGGAACGAATTTTCGCGGTCGAAAAAAATTATCCGAAAAATTGCATTTTG
CAGGTTTTAATTTTCCCGGTTTTTTCATTCTGGAATTTTCGTAGGTTTTC
AAGACTCGAAATAACAATTTCAAGTGGGTCGGACAAAATTTCCGATCAGG
GTTGCTTTAGCTTGAAAAATATCATTATTCGATCGGACATGAAGTTATTT
GGGTCGGACAATGTTATTTCGTTATTTCGAGCCCTGGTATTAATTTTCGC
GGTTCTGCCCTTTTTTGGACAAATTTATTTCGTTTTCGTTTTCCTACGGA
TTTTTCAAATTTTTCGATAATTGCGGGAATTGATTTTCGCGGTTTCGCGG
TTTTTAACTCTCAAAATTTTTGGTGGACTCAAATTTTCGCGATTTTGACA
AAAAACGCTAAAATTTATTCCCGCAAAAATAAGTTCCAATAAGGTGGGTT
TTTGAACCTGTTAAAAAGTTCTTAGTTTTTTAAAGCTTTAGTTCTGTTAA
ACAGAATCATCCCAAATTTTAGTATGTGCTGTTCTTGGTATTATCCCAGC
CTGAATTTTTGCCAAAGAAAATTGGCAAAATTTCATCCTCCCAATTATCT
TTTGCCAAATATTGTGATCTTTCACTTTGACAGTTTTGGCATCTAGTAAC
ACGAACACCGGAATGAGGATCTTCAGCAGAATCAAAACTATAATTAGTGC
ACTCACTCACAAACATGAATTGGCCAGATGGAATAAACTTTTTGTGGGCT
CTACAAAATACAAGCTTTTTCGTTTCAAATTTGTCCCTATTTGTCCCAAA
TTTGCCCGCGCCAACCCTGACGATATACTCAGATTTGAATGTGAGCAATC
TTAATAAACAAAATACTTATTTAGAGAATGTCTTTATTATAATTTGTTTG
CGACTTTTTTTAGATGCGGGGAGGTATTTTGTGAGAAATGTTGTCAATAC
CGCAAACGGTTGAATGCAGATTGTCAACCTGATCCTCAAGGAAACATCCA
TAGGGTAGGTAGTTTGTAAAAATCGAAAACAAAGCAGTGAAGTTACACCA
ACTAAACTTACCAACATATCTCATCAATTTATCTTTATATCCTTTTATAT
TTAATCCAAAAACTACATTATTTATGATCAATGCCGTATTTCTTTGCGTC
TCTCACAAATACGTATCCTTAAGAGCAGCGTTTGTTATAATTAGATATAC
GTTTTATAACCACAATTCGACCTTAAGATAGGTGTTCTATCATTTCCAAC
TGGAATGGAGGTTGAAACTTTAGGAATATAGTTTTTTTAAAGTATATTTT
AAGGAGTATGAAAAGCCGTTTAATTTGTCGTATGTACTGTCATAAACAGT
GGGGTTTGTTGATTTATCGTTGTTTTCCAACTGTGTTTAAGTTTATAACC
ATCTTGAACTTGAGTGTTTTCAGTAGATCCATTCCCAACATCTTAATCGT
GAGCATTCTGAAACATTTCAGGTATGTTACAATTGCTCTGACCTACACAC
ACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAATTCATTGAATGTC
GTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGATCGACTGGTGACT
GGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGAAAAACTTCGCGGA
TTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAAACTCAAAAGTGGC
TGGTATGTTGTCTTTTCTTTCGAATGTTAGTTTTAAAGGAAAAAACATGT
GATAAAATCTTGTGTGATGCGAAGGGAATTTTCTTATGAATTGCATGCAA
TTCTTTTCATTCAGGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAA
TCTAAATTCACCATCTTTAATGTCAAACATCATTGCCGGTATGTTTACTC
AGCCAAATTTTGCAATTATCATTATCAGCCTCTTAATATACGAAACTGTT
TGTTGGTCTCGCAAAAACAATGCAAAATTACTTGTTACATAAAAAATGAG
ACATGCTTTTTAATATCTCATACTGTGATACAAAATTTCTAATGTCAAAA
CGTTCTACTAAATCAATTGTGGTTTTAGAAAGAAGGCATTCTATAAACCG
TATTTCTCCATATTTTGGTATTGATGGTTCACTTTAACAACAGCAATCTT
TTTGCTAGCCTTGTACTTGACTCTTCTTCGCAGAAAAGACACGTAAAAAT
CGCCTCAAGAGTTCACGTGCTATGATTTTGCAGGTGTAGCCCATCATTTT
CCATAGCAATATCGACCTGACTTTTTATAGTGCAAATCTAGCTTTGAAGG
AGCGTTCCATTATCTTGTATTTAAAGTTATATCATTATTACTAATCAACA
GACTCGTTTTTTTTCAGTGTATGCGGGTCAGTATTTTGTCGTTTCTGTTG
CAAGAACGACCTGTTGTTGTATTATGACGAGCATGGACGAAGTACAGCTC
GTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAACCCACCACGTGCTCC
TATCTCCCTGTCTGTATACTCTGTCATGCTGATCTAGAAGAGTACCAGGT
ATTCCCTTACTTCTATGTTTGTCCGTCTCCCTGTCACATTTATAAGCACA
TATTTCTAAATTCATTTTCCAGCTTGTTCAGATAGACAACAAAACTGACT
GTTATATTCGCTCAATTCTTATAAAACTTTGCTTGGGATTTAGGTACAGC
AGTTCCACCTGATCATCAACGAAGTGGACGGAGAAGAAGGGAACATCGGA
CATGTCTCTCTCATCCTGGAACGATTGAGAAACGTTGAAAGAAAGCTGGA
AACGACCTTACCGCGATTCCAAGAGAAAGTGGAAGCTTATCTGTACGAAC
AACAGTACGAAACTGTGGCTGGTGAATCCAAGGTGACGGACTTTGCAAAA
CTTCAAGGAGATATCTCAGACTTATTTTCCAAGTACACGGCCATCATCCA
AGGTTTGAAGCAAATTCAATTGACTTCACCTACGGAGATTCGAATCATGA
AAAACATTGTTCACGTCAAATGTGCTTCGTATAATGATCAAATGAACCTC
TTCAAGAAATTGAAATCAACTTTGAATAAATCACTACCAGCTGAAGAACT
CGAACAATTACTTGAATACACCAATACACAGGCTATTAATAATACTTATG
TTACCGCTAGACAGCTTGGGTTCGAAGCATTGGCTCTAGCTGAGAAATAC
GACTTTGATACGGAGATAGCTGAACGGCTGAGTGAGATTGACGCCGTGTG
TTTCCAGGAGTTGAAAAAGTTCGTCCTTTCCACGGGAGATGACTGGGCAA
TCCACCATAAAATATTGAACTCCTTACTGAAAGATCAACTTGCTAAAAAG
AAGTTGGTTTCTCCTAGTCAACGTGCCGTTCAGAAGCAAGGTCCTGAGTA
TGTGCGTAGGTTTTTGATCCAAAGAACGTTCACCCTTGTTTATCAGATCT
CGACAGCGTTGAAAGCCAAATCTTCCGAAGAGAAATTCCAACAATCGAAA
GAAGCGTTGAAAGTTTTGTTGAACGATTTAAATGAAATGGTCAACCCTAA
TTGTTACTGAAACTCACTCAATTCAATGTTTTGTTGACTTTCTCACGCTG
AGAAGAAATCCAGTTCTAATGCATTCCACCTTATTTTTATTGTACTGGGA
AACTGTTAGCAAGAAGGTTGCCAACAATGGTAACATGTGACTGCGTTTGG
AATTGTTCATGTTTTTATGTTGTCTTTGCTTATTTTTAAATTGAAATTAT
CAAATTTGGGATGTGCCAGTCAGTTGGGTGACGGGCTTTAAAAAGGATAA
TAAGAAACACATTCATATACACAATACACAGTAG

Coding sequence (CDS) from alignment at sc0000054:373997..379980-

>TCONS_00005649 ID=TCONS_00005649|Name=TCONS_00005649|organism=Clytia hemisphaerica|type=CDS|length=10818bp|location=Sequence derived from alignment at sc0000054:373997..379980- (Clytia hemisphaerica)
GTACAGCAGTTCCACCTGATCATCAACGAAGTGGACGGAGAAGAAGGGAA
CATCGGACATGTCTCTCTCATCCTGGAACGATTGAGAAACGTTGAAAGAA
AGCTGGAAACGACCTTACCGCGATTCCAAGAGAAAGTGGAAGCTTATCTG
TACGAACAACAGTACGAAACTGTGGCTGGTGAATCCAAGGTGACGGACTT
TGCAAAACTTCAAGGAGATATCTCAGACTTATTTTCCAAGTACACGGCCA
TCATCCAAGGTTTGAAGCAAATTCAATTGACTTCACCTACGGAGATTCGA
ATCATGAAAAACATTGTTCACGTCAAATGTGCTTCGTATAATGATCAAAT
GAACCTCTTCAAGAAATTGAAATCAACTTTGAATAAATCACTACCAGCTG
AAGAACTCGAACAATTACTTGAATACACCAATACACAGGCTATTAATAAT
ACTTATGTTACCGCTAGACAGCTTGGGTTCGAAGCATTGGCTCTAGCTGA
GAAATACGACTTTGATACGGAGATAGCTGAACGGCTGAGTGAGATTGACG
CCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCTTTCCACGGGAGATGAC
TGGGCAATCCACCATAAAATATTGAACTCCTTACTGAAAGATCAACTTGC
TAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCCGTTCAGAAGCAAGGTC
CTGAGTATGTGCGTAGGTTTTTGATCCAAAGAACGTTCACCCTTGTTTAT
CAGATCTCGACAGCGTTGAAAGCCAAATCTTCCGAAGAGAAATTCCAACA
ATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGATTTAAATGAAATGGTCA
ACCCTAATTGTTACTGATGTATGCGGGTCAGTATTTTGTCGTTTCTGTTG
CAAGAACGACCTGTTGTTGTATTATGACGAGCATGGACGAAGTACAGCTC
GTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAACCCACCACGTGCTCC
TATCTCCCTGTCTGTATACTCTGTCATGCTGATCTAGAAGAGTACCAGGA
AAGTCAAGAAGTTGAATGGTGCACGAAATGTCAATCTAAATTCACCATCT
TTAATGTCAAACATCATTGCCGGTATGTTACAATTGCTCTGACCTACACA
CACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAATTCATTGAATGT
CGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGATCGACTGGTGAC
TGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGAAAAACTTCGCGG
ATTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAAACTCAAAAGTGG
CTGATGCGGGGAGGTATTTTGTGAGAAATGTTGTCAATACCGCAAACGGT
TGAATGCAGATTGTCAACCTGATCCTCAAGGAAACATCCATAGGATGGCC
GACAAGGTCAGGAGGCTGACATTCAGCACCCCTGGTTTCTTCAAAAATTT
GGTCAGTAAAACGACACAGAATGGGCAAAACCACGATGAATCGAGTCGTA
GAACGCTGAGTGACCCTGGTGCAGACTATATTCCTTCATATAATCAATCT
ATTCAGCAGGATCTTGACAATTTAGTGTCTGAAGATTCAGGGAATTTAAG
CAGTCCGGAAGTTGAACAACAGAGTGGTCTGATAGCAAATTCTTCATTTC
TACGTTTAAATAGAGCTCATTGGAAAGATAAATCAAAATTCAATCATTGT
CATAGATGTGCGAAGCCATTTGGCTTTGCAGAGAGGAAGTACAACTGCAG
AAGGTACAGCAGTTCCACCTGATCATCAACGAAGTGGACGGAGAAGAAGG
GAACATCGGACATGTCTCTCTCATCCTGGAACGATTGAGAAACGTTGAAA
GAAAGCTGGAAACGACCTTACCGCGATTCCAAGAGAAAGTGGAAGCTTAT
CTGTACGAACAACAGTACGAAACTGTGGCTGGTGAATCCAAGGTGACGGA
CTTTGCAAAACTTCAAGGAGATATCTCAGACTTATTTTCCAAGTACACGG
CCATCATCCAAGGTTTGAAGCAAATTCAATTGACTTCACCTACGGAGATT
CGAATCATGAAAAACATTGTTCACGTCAAATGTGCTTCGTATAATGATCA
AATGAACCTCTTCAAGAAATTGAAATCAACTTTGAATAAATCACTACCAG
CTGAAGAACTCGAACAATTACTTGAATACACCAATACACAGGCTATTAAT
AATACTTATGTTACCGCTAGACAGCTTGGGTTCGAAGCATTGGCTCTAGC
TGAGAAATACGACTTTGATACGGAGATAGCTGAACGGCTGAGTGAGATTG
ACGCCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCTTTCCACGGGAGAT
GACTGGGCAATCCACCATAAAATATTGAACTCCTTACTGAAAGATCAACT
TGCTAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCCGTTCAGAAGCAAG
GTCCTGAGTATGTGCGTAGGTTTTTGATCCAAAGAACGTTCACCCTTGTT
TATCAGATCTCGACAGCGTTGAAAGCCAAATCTTCCGAAGAGAAATTCCA
ACAATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGATTTAAATGAAATGG
TCAACCCTAATTGTTACTGATGTATGCGGGTCAGTATTTTGTCGTTTCTG
TTGCAAGAACGACCTGTTGTTGTATTATGACGAGCATGGACGAAGTACAG
CTCGTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAACCCACCACGTGC
TCCTATCTCCCTGTCTGTATACTCTGTCATGCTGATCTAGAAGAGTACCA
GGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAATCTAAATTCACCA
TCTTTAATGTCAAACATCATTGCCGGTATGTTACAATTGCTCTGACCTAC
ACACACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAATTCATTGAA
TGTCGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGATCGACTGGT
GACTGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGAAAAACTTCG
CGGATTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAAACTCAAAAG
TGGCTGATGCGGGGAGGTATTTTGTGAGAAATGTTGTCAATACCGCAAAC
GGTTGAATGCAGATTGTCAACCTGATCCTCAAGGAAACATCCATAGGATG
GCCGACAAGGTCAGGAGGCTGACATTCAGCACCCCTGGTTTCTTCAAAAA
TTTGGTCAGTAAAACGACACAGAATGGGCAAAACCACGATGAATCGAGTC
GTAGAACGCTGAGTGACCCTGGTGCAGACTATATTCCTTCATATAATCAA
TCTATTCAGCAGGATCTTGACAATTTAGTGTCTGAAGATTCAGGGAATTT
AAGCAGTCCGGAAGTTGAACAACAGAGTGGTCTGATAGCAAATTCTTCAT
TTCTACGTTTAAATAGAGCTCATTGGAAAGATAAATCAAAATTCAATCAT
TGTCATAGATGTGCGAAGCCATTTGGCTTTGCAGAGAGGAAGTACAACTG
CAGAAGGTACAGCAGTTCCACCTGATCATCAACGAAGTGGACGGAGAAGA
AGGGAACATCGGACATGTCTCTCTCATCCTGGAACGATTGAGAAACGTTG
AAAGAAAGCTGGAAACGACCTTACCGCGATTCCAAGAGAAAGTGGAAGCT
TATCTGTACGAACAACAGTACGAAACTGTGGCTGGTGAATCCAAGGTGAC
GGACTTTGCAAAACTTCAAGGAGATATCTCAGACTTATTTTCCAAGTACA
CGGCCATCATCCAAGGTTTGAAGCAAATTCAATTGACTTCACCTACGGAG
ATTCGAATCATGAAAAACATTGTTCACGTCAAATGTGCTTCGTATAATGA
TCAAATGAACCTCTTCAAGAAATTGAAATCAACTTTGAATAAATCACTAC
CAGCTGAAGAACTCGAACAATTACTTGAATACACCAATACACAGGCTATT
AATAATACTTATGTTACCGCTAGACAGCTTGGGTTCGAAGCATTGGCTCT
AGCTGAGAAATACGACTTTGATACGGAGATAGCTGAACGGCTGAGTGAGA
TTGACGCCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCTTTCCACGGGA
GATGACTGGGCAATCCACCATAAAATATTGAACTCCTTACTGAAAGATCA
ACTTGCTAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCCGTTCAGAAGC
AAGGTCCTGAGTATGTGCGTAGGTTTTTGATCCAAAGAACGTTCACCCTT
GTTTATCAGATCTCGACAGCGTTGAAAGCCAAATCTTCCGAAGAGAAATT
CCAACAATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGATTTAAATGAAA
TGGTCAACCCTAATTGTTACTGATGTATGCGGGTCAGTATTTTGTCGTTT
CTGTTGCAAGAACGACCTGTTGTTGTATTATGACGAGCATGGACGAAGTA
CAGCTCGTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAACCCACCACG
TGCTCCTATCTCCCTGTCTGTATACTCTGTCATGCTGATCTAGAAGAGTA
CCAGGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAATCTAAATTCA
CCATCTTTAATGTCAAACATCATTGCCGGTATGTTACAATTGCTCTGACC
TACACACACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAATTCATT
GAATGTCGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGATCGACT
GGTGACTGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGAAAAACT
TCGCGGATTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAAACTCAA
AAGTGGCTGATGCGGGGAGGTATTTTGTGAGAAATGTTGTCAATACCGCA
AACGGTTGAATGCAGATTGTCAACCTGATCCTCAAGGAAACATCCATAGG
ATGGCCGACAAGGTCAGGAGGCTGACATTCAGCACCCCTGGTTTCTTCAA
AAATTTGGTCAGTAAAACGACACAGAATGGGCAAAACCACGATGAATCGA
GTCGTAGAACGCTGAGTGACCCTGGTGCAGACTATATTCCTTCATATAAT
CAATCTATTCAGCAGGATCTTGACAATTTAGTGTCTGAAGATTCAGGGAA
TTTAAGCAGTCCGGAAGTTGAACAACAGAGTGGTCTGATAGCAAATTCTT
CATTTCTACGTTTAAATAGAGCTCATTGGAAAGATAAATCAAAATTCAAT
CATTGTCATAGATGTGCGAAGCCATTTGGCTTTGCAGAGAGGAAGTACAA
CTGCAGAAGGTACAGCAGTTCCACCTGATCATCAACGAAGTGGACGGAGA
AGAAGGGAACATCGGACATGTCTCTCTCATCCTGGAACGATTGAGAAACG
TTGAAAGAAAGCTGGAAACGACCTTACCGCGATTCCAAGAGAAAGTGGAA
GCTTATCTGTACGAACAACAGTACGAAACTGTGGCTGGTGAATCCAAGGT
GACGGACTTTGCAAAACTTCAAGGAGATATCTCAGACTTATTTTCCAAGT
ACACGGCCATCATCCAAGGTTTGAAGCAAATTCAATTGACTTCACCTACG
GAGATTCGAATCATGAAAAACATTGTTCACGTCAAATGTGCTTCGTATAA
TGATCAAATGAACCTCTTCAAGAAATTGAAATCAACTTTGAATAAATCAC
TACCAGCTGAAGAACTCGAACAATTACTTGAATACACCAATACACAGGCT
ATTAATAATACTTATGTTACCGCTAGACAGCTTGGGTTCGAAGCATTGGC
TCTAGCTGAGAAATACGACTTTGATACGGAGATAGCTGAACGGCTGAGTG
AGATTGACGCCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCTTTCCACG
GGAGATGACTGGGCAATCCACCATAAAATATTGAACTCCTTACTGAAAGA
TCAACTTGCTAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCCGTTCAGA
AGCAAGGTCCTGAGTATGTGCGTAGGTTTTTGATCCAAAGAACGTTCACC
CTTGTTTATCAGATCTCGACAGCGTTGAAAGCCAAATCTTCCGAAGAGAA
ATTCCAACAATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGATTTAAATG
AAATGGTCAACCCTAATTGTTACTGATGTATGCGGGTCAGTATTTTGTCG
TTTCTGTTGCAAGAACGACCTGTTGTTGTATTATGACGAGCATGGACGAA
GTACAGCTCGTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAACCCACC
ACGTGCTCCTATCTCCCTGTCTGTATACTCTGTCATGCTGATCTAGAAGA
GTACCAGGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAATCTAAAT
TCACCATCTTTAATGTCAAACATCATTGCCGGTATGTTACAATTGCTCTG
ACCTACACACACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAATTC
ATTGAATGTCGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGATCG
ACTGGTGACTGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGAAAA
ACTTCGCGGATTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAAACT
CAAAAGTGGCTGATGCGGGGAGGTATTTTGTGAGAAATGTTGTCAATACC
GCAAACGGTTGAATGCAGATTGTCAACCTGATCCTCAAGGAAACATCCAT
AGGATGGCCGACAAGGTCAGGAGGCTGACATTCAGCACCCCTGGTTTCTT
CAAAAATTTGGTCAGTAAAACGACACAGAATGGGCAAAACCACGATGAAT
CGAGTCGTAGAACGCTGAGTGACCCTGGTGCAGACTATATTCCTTCATAT
AATCAATCTATTCAGCAGGATCTTGACAATTTAGTGTCTGAAGATTCAGG
GAATTTAAGCAGTCCGGAAGTTGAACAACAGAGTGGTCTGATAGCAAATT
CTTCATTTCTACGTTTAAATAGAGCTCATTGGAAAGATAAATCAAAATTC
AATCATTGTCATAGATGTGCGAAGCCATTTGGCTTTGCAGAGAGGAAGTA
CAACTGCAGAAGGTACAGCAGTTCCACCTGATCATCAACGAAGTGGACGG
AGAAGAAGGGAACATCGGACATGTCTCTCTCATCCTGGAACGATTGAGAA
ACGTTGAAAGAAAGCTGGAAACGACCTTACCGCGATTCCAAGAGAAAGTG
GAAGCTTATCTGTACGAACAACAGTACGAAACTGTGGCTGGTGAATCCAA
GGTGACGGACTTTGCAAAACTTCAAGGAGATATCTCAGACTTATTTTCCA
AGTACACGGCCATCATCCAAGGTTTGAAGCAAATTCAATTGACTTCACCT
ACGGAGATTCGAATCATGAAAAACATTGTTCACGTCAAATGTGCTTCGTA
TAATGATCAAATGAACCTCTTCAAGAAATTGAAATCAACTTTGAATAAAT
CACTACCAGCTGAAGAACTCGAACAATTACTTGAATACACCAATACACAG
GCTATTAATAATACTTATGTTACCGCTAGACAGCTTGGGTTCGAAGCATT
GGCTCTAGCTGAGAAATACGACTTTGATACGGAGATAGCTGAACGGCTGA
GTGAGATTGACGCCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCTTTCC
ACGGGAGATGACTGGGCAATCCACCATAAAATATTGAACTCCTTACTGAA
AGATCAACTTGCTAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCCGTTC
AGAAGCAAGGTCCTGAGTATGTGCGTAGGTTTTTGATCCAAAGAACGTTC
ACCCTTGTTTATCAGATCTCGACAGCGTTGAAAGCCAAATCTTCCGAAGA
GAAATTCCAACAATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGATTTAA
ATGAAATGGTCAACCCTAATTGTTACTGATGTATGCGGGTCAGTATTTTG
TCGTTTCTGTTGCAAGAACGACCTGTTGTTGTATTATGACGAGCATGGAC
GAAGTACAGCTCGTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAACCC
ACCACGTGCTCCTATCTCCCTGTCTGTATACTCTGTCATGCTGATCTAGA
AGAGTACCAGGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAATCTA
AATTCACCATCTTTAATGTCAAACATCATTGCCGGTATGTTACAATTGCT
CTGACCTACACACACAAGCACTTGGAGAATGTAAAAGCCTTACTGAAGAA
TTCATTGAATGTCGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTTGGA
TCGACTGGTGACTGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGTTGA
AAAACTTCGCGGATTCTCTACTGGGCATCAAAGTACCAGAATGGCAGAAA
ACTCAAAAGTGGCTGATGCGGGGAGGTATTTTGTGAGAAATGTTGTCAAT
ACCGCAAACGGTTGAATGCAGATTGTCAACCTGATCCTCAAGGAAACATC
CATAGGATGGCCGACAAGGTCAGGAGGCTGACATTCAGCACCCCTGGTTT
CTTCAAAAATTTGGTCAGTAAAACGACACAGAATGGGCAAAACCACGATG
AATCGAGTCGTAGAACGCTGAGTGACCCTGGTGCAGACTATATTCCTTCA
TATAATCAATCTATTCAGCAGGATCTTGACAATTTAGTGTCTGAAGATTC
AGGGAATTTAAGCAGTCCGGAAGTTGAACAACAGAGTGGTCTGATAGCAA
ATTCTTCATTTCTACGTTTAAATAGAGCTCATTGGAAAGATAAATCAAAA
TTCAATCATTGTCATAGATGTGCGAAGCCATTTGGCTTTGCAGAGAGGAA
GTACAACTGCAGAAGGTACAGCAGTTCCACCTGATCATCAACGAAGTGGA
CGGAGAAGAAGGGAACATCGGACATGTCTCTCTCATCCTGGAACGATTGA
GAAACGTTGAAAGAAAGCTGGAAACGACCTTACCGCGATTCCAAGAGAAA
GTGGAAGCTTATCTGTACGAACAACAGTACGAAACTGTGGCTGGTGAATC
CAAGGTGACGGACTTTGCAAAACTTCAAGGAGATATCTCAGACTTATTTT
CCAAGTACACGGCCATCATCCAAGGTTTGAAGCAAATTCAATTGACTTCA
CCTACGGAGATTCGAATCATGAAAAACATTGTTCACGTCAAATGTGCTTC
GTATAATGATCAAATGAACCTCTTCAAGAAATTGAAATCAACTTTGAATA
AATCACTACCAGCTGAAGAACTCGAACAATTACTTGAATACACCAATACA
CAGGCTATTAATAATACTTATGTTACCGCTAGACAGCTTGGGTTCGAAGC
ATTGGCTCTAGCTGAGAAATACGACTTTGATACGGAGATAGCTGAACGGC
TGAGTGAGATTGACGCCGTGTGTTTCCAGGAGTTGAAAAAGTTCGTCCTT
TCCACGGGAGATGACTGGGCAATCCACCATAAAATATTGAACTCCTTACT
GAAAGATCAACTTGCTAAAAAGAAGTTGGTTTCTCCTAGTCAACGTGCCG
TTCAGAAGCAAGGTCCTGAGTATGTGCGTAGGTTTTTGATCCAAAGAACG
TTCACCCTTGTTTATCAGATCTCGACAGCGTTGAAAGCCAAATCTTCCGA
AGAGAAATTCCAACAATCGAAAGAAGCGTTGAAAGTTTTGTTGAACGATT
TAAATGAAATGGTCAACCCTAATTGTTACTGATGTATGCGGGTCAGTATT
TTGTCGTTTCTGTTGCAAGAACGACCTGTTGTTGTATTATGACGAGCATG
GACGAAGTACAGCTCGTTTGATCAACGTTGTTGGCTGTCCTGATAAAGAA
CCCACCACGTGCTCCTATCTCCCTGTCTGTATACTCTGTCATGCTGATCT
AGAAGAGTACCAGGAAAGTCAAGAAGTTGAATGGTGCACGAAATGTCAAT
CTAAATTCACCATCTTTAATGTCAAACATCATTGCCGGTATGTTACAATT
GCTCTGACCTACACACACAAGCACTTGGAGAATGTAAAAGCCTTACTGAA
GAATTCATTGAATGTCGTAAAAACAAGCGCATCATTGTTTGTGAAGAGTT
GGATCGACTGGTGACTGGGTTTGCTGATAACGTTCGTCCTGACCAAAAGT
TGAAAAACTTCGCGGATTCTCTACTGGGCATCAAAGTACCAGAATGGCAG
AAAACTCAAAAGTGGCTGATGCGGGGAGGTATTTTGTGAGAAATGTTGTC
AATACCGCAAACGGTTGAATGCAGATTGTCAACCTGATCCTCAAGGAAAC
ATCCATAGGATGGCCGACAAGGTCAGGAGGCTGACATTCAGCACCCCTGG
TTTCTTCAAAAATTTGGTCAGTAAAACGACACAGAATGGGCAAAACCACG
ATGAATCGAGTCGTAGAACGCTGAGTGACCCTGGTGCAGACTATATTCCT
TCATATAATCAATCTATTCAGCAGGATCTTGACAATTTAGTGTCTGAAGA
TTCAGGGAATTTAAGCAGTCCGGAAGTTGAACAACAGAGTGGTCTGATAG
CAAATTCTTCATTTCTACGTTTAAATAGAGCTCATTGGAAAGATAAATCA
AAATTCAATCATTGTCATAGATGTGCGAAGCCATTTGGCTTTGCAGAGAG
GAAGTACAACTGCAGAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003193	XLOC_003193	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00005649-protein	TCONS_00005649-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000054	supercontig	sc0000054:373997..379980 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.3351	26.8708	6.70183	3.57087	26.206	20.0679	20.0197	21.7892	15.6388	18.2306	20.0015	18.8854	18.0113	22.3276	17.105	23.1396	10.0216	10.524	13.3779	10.17	7.73025	7.57545	18.4597	18.2633	8.85789	10.1567	9.11507	6.36975	12.5733	13.2015

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000306	Znf_FYVE
IPR013083	Znf_RING/FYVE/PHD
IPR017455	Znf_FYVE-rel
IPR011011	Znf_FYVE_PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00005649 vs. Swiss-Prot (Human)

BLAST of TCONS_00005649 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00005649 (transcript) - C. hemisphaerica