TCONS_00005634 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005634
Unique NameTCONS_00005634
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1503

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005634 ID=TCONS_00005634|Name=TCONS_00005634|organism=Clytia hemisphaerica|type=transcript|length=1503bp
TTCTCATTCAAAATCCAATCTTCTTGCTAGaacaaaaaataatgGATTAT
ACCAAAGAAGAAAGTGATTTTGAAAAAACGCGCAAAGAAAATATCAAGAG
AAATGAAGAAgaatttcaaaagctttttccgGCTATGCTGCTTAAACCCT
TCAAAGATTCACCACGTACCACTGAAGTTCGTCGTGCACGACGCAATAAC
TTACACAGTATTGTTCAAACAATCACTCCTAGGGAATCTTTGAGAAGGTC
ATGTAAAAGGGAAAGAGAACCCAGTTTGGATACTTTTTCTGATTCTGACG
ATGGAGGAGATGACGAGGTAAGCAATGGTAGTTCTGGATCTGCTGTTGTC
GTCAAGTTTGGACAGTGGAATAAGAAGTTCAAATCGCTCAGATATCAAGA
TGATGTTAAGGATAAAGATTTCATCTACGATGGAGATTCAATTTCTGATG
ACGAGCACCAAGAGGAAGGGAAGAAGAGGAAGAGTAAAACTCCTCGTGTG
AAGCCTCAATCACGTGTTAAAGCAGCACGTGTTTTGCGTCCTTTCGATGC
AGTAACTGAGGAGGATTTGATTCTAGTGGCTGATCGAACGAGCGATAAAC
GTTATGATCAAGTGGATGGTACGAGTTGTCATCAATGCCGTCAAAAGACG
GACGACTTAAAAACAGTATGTCGTAGTGGGCACTGTGTCGGTATACGAGG
CCAGTTCTGTGGGCCATGTTTAAAGAATCGTTATGGTGAGTGTGCAAAAG
AAGCCATCATGAATGCCACGTGGCAATGTCCGCCATGTCGTGGTATTTGT
AATTGCAGCTTTTGTATGAAGAAACGAGGACGTCGTGCTACAGGTATTAT
GATCCATGCTGCAAAACAAAGTGGGTATACTGATGTCTCCTCTTTTCTTG
GATTGAAAGAGAAAGTCGTCGAATGACGTTGATACTTTATTAACGTTTTC
TTCAATCATGTTGGTTGTTTATATGAGATAGACTGAATTTTTCATCCCTT
GAACAATAACTGCTTTGCAATCCTACCTTTGATCTATCTTAGATTTCTTT
ATTAATTCAGTAGCAAAGAATTTCAACGTTATTACTTTCAAATGATATTT
TCAGTATAATTTTCCAAACAATTGGAAAAGTTTTTAAGTATTTCATTTAC
ATTTTATTTGTATATAACAAAAATCCgtgtattttttcattaaagcCCAA
CTTGCCATGTAAACCCTTAATAGATATCCTCCCAGCGTAGAGGACTATCC
GTACCCTTTGCATTTTTTGTCTGTTCCCTAAGTTCTCCTTTTATCCATTT
GCATTATACCCCCTTGCTGTGTTTCCCCCTTTCAATATCAACCTTTTCCG
AACCTCTGTTCCACGTACTTTCGTACCTTTTAAAGTATTTCTCATTGgtc
aatttcaaagaaaaatcttgAGGCATATTATATTCAATGGTATGTTATTC
TCTTTCTaggaaaagatatttttaaaaatttttaatttagtaTTACGTTC
Ccg
Run BLAST on NCBI

protein sequence of TCONS_00005634-protein

>TCONS_00005634-protein ID=TCONS_00005634-protein|Name=TCONS_00005634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
LIQNPIFLLEQKIMDYTKEESDFEKTRKENIKRNEEEFQKLFPAMLLKPF
KDSPRTTEVRRARRNNLHSIVQTITPRESLRRSCKREREPSLDTFSDSDD
GGDDEVSNGSSGSAVVVKFGQWNKKFKSLRYQDDVKDKDFIYDGDSISDD
EHQEEGKKRKSKTPRVKPQSRVKAARVLRPFDAVTEEDLILVADRTSDKR
YDQVDGTSCHQCRQKTDDLKTVCRSGHCVGIRGQFCGPCLKNRYGECAKE
AIMNATWQCPPCRGICNCSFCMKKRGRRATGIMIHAAKQSGYTDVSSFLG
LKEKVVE
Run BLAST on NCBI

transcript from alignment at sc0000054:318372..328646-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005634 ID=TCONS_00005634|Name=TCONS_00005634|organism=Clytia hemisphaerica|type=transcript|length=10275bp|location=Sequence derived from alignment at sc0000054:318372..328646- (Clytia hemisphaerica)
TTCTCATTCAAAATCCAATCTTCTTGCTAGGTATTGCTCCAACATCCTTA
TCAACACAGAAACATGAAGCATAAACAAACTAAATTAGAATGGCAAATGT
ACACATCACAGAGGCACAGAAATTTGATTTTATAATTTTTTACAAATCAC
AAGTCCAAAGCAGAAAAGAGTTCTATAGTAAAGAAGGAGAAAAACTTGAT
TTTTAAGACATATGTATACAAAAGAGAAACTAAAATAACTTAATTAATCC
TAGATTTGTAAAAAAGAGAAATTGTCACTAACCTGAGATATATTTATTCT
CTGACACTTTTCTGTTCATTTTCCATTTTCGACCTCCATCCCACAACTCC
ATAAAGAAATATTTATAGTATCTGTGGAGGAGATTATATAAACAAAACAC
TTCATCGCTGAAGCTATATAGTTCATTCGATTGAAAAATAAAACGACGAG
ATAAAAACTCATTTCACTGAGTATGATAATTTAAAAATGGCGGGAATTCT
AAAAATGGTAGCGCATTCAGCATGTGAAGAGGAAAATGTTATATCGGATG
GCCAAAAGTCACCTCACCTTCTTTTCTTTTCTTTCCTATCTCTTATCCTA
TTTTTCTCTTTTCTGACTGTCTGAGTTTCTGAGACTTAGTTTCTCATTTC
TGACTGAGTTTTCATACCTGTCAATCAATTGTCCATCAATTTCGACCAGT
CTAATTTTCGCACCGAGTGGGATTCGAACCACCACCAAAGAAAGACCTTC
ACATTCGGAAGCCAGCGCTCTATCCGTTGAGCCATCGCCGCACAGCAAAA
CCACGCAATTCATAACAAATTATACCGAACTGGCAAAAGACGGGGGTAAT
GTTATATTAATATGGGTAACAGTACCCCTTTTTTAAACCTGACTGAAATT
CGAGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACCC
GGCACAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGACCC
TACCTAACCCCCGGAAAAGTGACTATCAGCGATCCGTGGATAAAAAAATA
AAATTAAAAAATGAAGGTGACTATTGGCCATCCGATATAAGAGCAACCAT
GTGAAGAATGTAGCATGCGATTTTAAAAAACTCCAGCATCGAAGCAATAA
CAAGATAATATTTTGTATACACACTTTAGTAACATCATTGCATCAATGTT
AAATGCTGTAGGTTTACTTATCATCCAACATGATCATCGTAAATAATTAG
GAAAAGAAAAGGTCTGTGCTCTGTCTGTGTCTGCTGTATATTTATTCTCT
TCTTGTGTTTTACTGTTTGTGTCTTGTAGTGAGGTATTTTTGGACCTACC
CCGATGGGGTAGAGGTCCTATAAATTAACCGATGTCCGTCCGTTCGTTCG
TCTGTTCGTTCGTCCGTCCGTCTGTTACCAGCTTTTCTCAATGTTGACTC
ATTATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAA
AATTACGGGTGCATGTCTAGTCCGACACTTTCTAGTCCGACAGTAAAATA
GTCCGAATCTATAAAATAAATTTAAAATTTGGTAGTCTTTTTTTCCGACG
TCACTTTTGTCCGAAAACGAAAGATTTTTGAGTGTCAAATGTTGAATAAG
GGTTTTTCACTGAGATAATATTAATAAAAGTTGATTTTGGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGGTTTA
GGGGCCTAACCTCAAAATCGGAACTTTGGATTTTTAGAAAAAAATGTGCC
TCCTCTTCCGCGATTCATATTACGTTTTTTATATGTTTTTTTTACTCGTT
GTCGGACAAAATTGTTGTCGGAATACTGACGCATTCGTCAAACCCAACGT
TGGACATTTATACTGTCGGACTAGAAAGTGTCGGACTACTGACGACCTCC
CAAAATTACGGAGCCCGATTTTCGAAAAACATTTTTTTACGGCCGAAAAT
GCTGGAAATATGCCGGAAATCGCCGTTTTTCTAGATTTTCATTAGATTTT
TTTCTTATAATTGGTGGTTTTTTTCATTCAAAAACATTATTAATAGCAAT
CAAGCATGTTTCAATTTTCAAAAAAATTGATTTTTGAAGCCGGAACTATT
CAAAAATCGCCGGAAAAACCTATTTTTGCCGGAAAGACAGTATTTCTTGA
ATTTCTCGAGCTGTACCGTGAGAGGTCCTAAAGCCGACAGTCCAGCCTAA
TTCCGATCCCCTAAATAACTGTTATGAAAAAAAATTCTATGTTTACAAAC
ATTCCCTCTCCAAGTTGAACGATAAACTATTGCTAGAACTCTCGAAACAA
AACATCTAACAAGATAGCTGTAATGTCAAGATGTCAATTAATGTAATTAA
AAAGTGCGATTTGTAAAAATAATTACCTTTTATTCTGGATCAGTTGCTCA
TGTTTAAAACGATAACAGTTTTGTAATAAAAGTGACTTGTGCGGGAAAAA
TACGAAACAACTTGGACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNCT
AAATTGTAAAAATGGCGCGAAGTTGAAAAAAGGGCGGATGTGGTAGCACT
AATTTGAATAACAAACATCGAATCAATGAGGCGGCAACTATCAATGCCCT
TTTTACCACCTATAATTCCGGATGTTTATTTACGGAAGGCCCACAATCGG
ACAGCTCTTCATTTAAGTGTACTCTTTGACGACATATATTATCTTTACTA
GAATAGGAGCAAGGTGTCATGTAATATATAATATAATGTAATATACGTCG
TCTATATGTATCCTTACACAAAGTCTAAACCCCGCAATCAAGCCAAGTGC
CAGTGTAAAGTAATAGAAACCAGGCTTGATTACGTAACGTTTCAAAATGA
GCACGCTCGTACACAGACCTCTTTTATATTTTCGTGTGCTTTGGAAAATC
AAAACATCTCGTTACTTTTTATGATCATGCTGTTACTACTGTTGTCATTT
ATGACGTTGTGCATATTATTGCAATAAAAAAATATGTTTTGTTATAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCG
TCACAGCGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCC
ATCGGCTTTAGGCTGGGCTGTCGGCTTTAGGACCTCTCACGGTACTTAAT
ATTTTTTTATGAAATTTTGCGCACTGATGAAAGATGAACCGGAACTTTCT
ATTTCTATTTTCCCTACACTCCCCTTCCCTCTTCCCCATCAACAATCAAT
GATAAAATTTAATGTGTTATGCATTTTTGCAAAACGCTATATCGTCTGAC
TGATTGTTTTCATTTTTCTCCTTATTGCCTTATTATCTAGCTTTCATCAT
CAGGTAGGTCCATTCAGCATGTTGCTTGTTTTATGTTATGATAACAAGGC
GTTGACAACTAACAAACCTGTAAAGGGTCATTCAGATAGTTTGTATATTG
AATGAAATACTGTGAAGTCGGGTAACTTGCATCAGTGGAGGCTAACATGC
ATAGCCCTCGAATGAATGACCTGGCTGGTCCTTAAAATACAAAGTTAAAT
CAAAACAAAAATGGTAGAGTAGAGCTGCGAGCAGAGCTGCGTAGGGCGGC
AATCACAAATATCTTCATTTCGCGTCCTCGTTGAGTCGGTCGGTTGTAAA
AATTTTCGGGTTTCCATTTTTCCATCCATTTTTGGAGTGCATTCTTGGAG
GAAACCACCAGCCAGCCAGCAGCCAAAATAACCGCGTGTAATGGGTGGTT
TAAAATTATGACCTTTGAACACTCTGACCTCCGACCCCAAAATGGCGCAT
GTTATGATAAACAAAGTCAAAATGCTGCGAATGCGCTAGAAATCGCTCGC
TGAATGAAAATCGGCAATAATAAAATTATTGAACGAAGGAAAAGTCATTG
ACATAAAAAGTCCGACAAATTTACCGACTCACCGACTCAATTCTACTCAA
TTTTCGAGAGTCGGGCGGGCGACGCGAAACGAAGATATTTGTGATTGCCG
CCTAGTTCATTCATTTGTTTTTAAATTTTGCTGCTTTGATTGGTCGGTCA
TTTGACGTCATATGATATGAGGCCTATAAATGTTAGCCTCCAATTATGCA
ACTTACTCGACTTCACGGTAGACCTTTGGTAGGGTACTAGTGTCATTTTG
CATAAGATTCCACTTTGCACACTAAGATTTTCTCCTGACTTTTCCACTAT
TTTTCCCAGGATAACCGACATATCATGAGATTAGAAAGGGTTTTTTTCTA
AAGGCACAGAGAATCTTATAGAATCTTGTGTTTACTTACTACATGATTTC
CTCAACTTTTTGAAGTCCTGGTCTTTTTCTGATAGAAAAGTGACAGCCAA
ATCTTATTAGTGCAGGAAGTGGAATCTTATACAAGTAAACCATTATTGTG
AATAGTTGATTGAGAGAAGGTGACTGTCTATTGAATAGTAAATTACTCCA
GCCAGTAAAACGGGATAAATTATTTTGTATCTACCGGGTGTGCCACAAAT
AAGGTACCCTCTTTGATTTGATATTGTAGGCAGTAGAAAATAGATTTTTT
AAAGATTGTTTTGGAATCATTCAGAGGAAAGCCTAACTTAAAATTTGGTG
TATTACTTTTAAATTTTACTTCATTGGTTCAAAAGTTATGTTCAAAAACC
TAAAATGTCATTTTTTTAAAATGTCAATTTCTGAATGCTCAATTTTTATC
TTTTTTGGTCACTAATATTATTCATAATGTTTTTGGAAGTCTTCAATGAG
AACAAAAAGACTCATTTAGGAATTACAAATTAGAAAAATAGAAAAAAATC
TACTCTCTAAGGGTCACTTTCTTACAAAATTGTTTTTATAGGAGCAATTT
TATGAGAAGAGGATGCTGAAAATTAAAAACAAATTAATAACAATCTGAAG
CTCAGCTACAGCAAATATTTAAATACAAAATAATGAGACCAAGGCTGAAT
CAAGAATATAGAGAAATAAACACCATTACTCTTAGGTGCCAAATAAACCT
TATTGGGACCCCCATGTTTATAAATTTTTAAGAATATTTTCAGCTGTCAA
AGAGAAGGTCCCTTATTTTGCTCTAAATAGCCTAATTTTAGCCTATAATT
ACCTTATTTTGGGGTTTTCAGAAGTACAATTTCCTACCCCCCCGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTA
AATTACCAATTAGTGAAGTATCTTGTAAAAACTCCAGCTCATCCCAATTA
AGAATCTGAATTAAAAACATTTTGGGGATTTCATTTTCCAAGAACATTTT
GTCATATTTTAGGCGAGGAAAATATAGAAAACTCTAAACGAGAAAAATAT
ATCCTATATTGTACNAATCGAACTGCGCGGGCAGAAAATAACAACAACGA
CCTCAAACTGAACGCTATTGTTATATTGTACGAGTAAAAGTGTAATAACT
GGTTTATCGTCAACTTGAAAAATATCAACAAACTTTTCTCTCTCCATTTG
TGTCTTTTCCTATGTTTTTTTTTCTCTTCCTGTTTTTTCGCTCTCCTCTC
TCAACATCAAAACATTCGAAAATAGTCTTTGGAATCGAATGGTCATTAAA
AAGAAAAATTCTTTGAATAAACCTTTGTCTTGTCTATTGTAAGCAAGAAA
AAAAACATTTCTAATCATAAAATTGTACAAAATATGATCTCTCGCTTACC
AGCCCCCTTTTTTGAACGTGGTGTTGTTTGTATTTGTACAGTACAAAATG
AAATACAGCATTTATGTACACATTTTTAGCCAATCAGATTGCTCATATTT
TTCATGATGACAATAACACTCAAAAGCATAATTAGTAAATAGGATGAAAT
TTTCACCTCAGATGCATCCTGCTGAGAGAAAGCAATTCACAAAAAAAGCA
ATTAATTTTTGCAAATTTCTGCTGATGTCATAATCAGAAAAATGGAATAT
TTTTTTCAAAAGTTGGAGATTACCAATACCTGTCCATTGGGCAAATTTTC
AACATCTTTTGATTAGTACTTTTTGAGATATTTAAATTCTAATTTTTATG
ACGTCATCAATAAAGACAAGAAATTTATTTTATTAACAGGCATTTCTGAA
ATCTACATCCTATTACGCTTCTTTTGACGTGTAAATGACCGAAGACCCTC
ACTTTTCTGCGCCAAACTTATGTCCTTTTATACCATACGTTACACAAGAT
GAGACAACACTTGAAGAGAAAATTTTGACCATTGATTTAATTTTTTCTAA
TCTCAAAATGGAAAAGTTTTAAGAATCACAAGGCTTACTTTGATTTATGT
AATTTTTATTAAACTGTATCATATAGGCAAGTTGTGAGGCCTTTGAAATC
TGTTGAATATACACCCCCTTCTCACAGACCCACTGTGACCCCTTCCCACT
GGAAAATTTGGCCAAAATATTGTCCCCAGTGAAAAATTATACTTCAATTT
TTGACCTCACTGAAAATAATCAAATAAACCNAACATTTCTTTCTCTTTTT
ACACCCCCTTCTCACAGACCCAATGGGACCCCTTCCCACTGGAAAATTTG
GCCAAAATATTGTCCCCAGTGAAAAATTATACTTCAATTTTTGACCTCAC
TGAAAATAATCAAATAAACCAATTCCACTGCTTAATATCATGGATGTTAT
GGGTTGGTATGGGTTTATTAGAAAGACTTCCTAGAAACTACATAAAATTT
TCAAAATCAGATTTCCATCGTAAAATACACTTTATATTTACGTTTTTAAG
GGCCTCTTTCAATTTTTTTTGGCAGATTTGTCAAACTAAAATCATGCATT
CAATACCCTTAGAGAGAGAGAGAGAGAGTTTTAAGAAGGTGGTGACAAAT
ACTAGAACATAATACAATATCTTGGTGGTCTTTAAAGGTGTGTTATGGTA
CTTCCCTTACCTTCTCATGCTCCTCAGGTACTTGTAGTTGTTAAAGGTAA
AATCAGATGGTTTGAGATATTTTGCCTGCAGATAGCTTCTAGGATTTTAG
GAAAAACCTCAAAATTTTTTGGTGTACTTATTTTCCTAACTCAAGTTATG
CCACTTTGAAATTTTGAACCTTTGCTTGAAAACAATAGAAAAAAGTGTGA
AAAGTCCATAGTGTGCAGAGGGGTCTGAACCCCCCCATTAATATTTCATC
CCCCCCTATAAAGGTATCCCCCCTATTTTTAAAATTTTTTGATCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAGGGGTCCGA
GCCCCCAGCATATAATTTGTACTCCCAGTATTGGGGAAGAATTTTGATGA
ATAAAATATATTTTTCAGTGTGAATTCGTACCAATACAGTAGTCAATGAA
CTTGAAAACACTAGCAAATAAACAGTAAACTAATAATAGTAAAACTAGGA
AAAATAAGAAATAAGACAAAAAGTTACTATACCCCCCATTTTTATTTGAT
CCCCCCAAGCTCAAACCCCCCATTTTAACTGGAAAATTGCCCACCCCCCC
CCTATAAAGCCTTCCTTGAAAACTCGGATCCCCCCCCCTTAAAAAAGGGG
GGGGGGTTCATACTATGAAAGTCCCTGAAAAGTCCCATTTTTCGAGATTT
CAAATTGGCATAACTTGAGTTAAGAAAATAAATACACCGAAAAATTTAGA
AAGTTTTCCTAAAGTCCTAGAGGCTAGCTGCAGGCAAAATATCTCAGACC
ATCTGATTATCCCTTTAAGGCAGGTATCAAAATATACTTTATTTTATTTT
AGAACAAAAAATAATGGATTATACCAAAGAAGAAAGTGATTTTGAAAAAA
CGCGCAAAGAAAATATCAAGAGAAATGAAGAAGAATTTCAAAAGCTTTTT
CCGGCTATGCTGCTTAAACCCTTCAAAGATTCACCACGTACCACTGAAGT
TCGTCGTGCACGACGCAATAACTTACACAGTATTGTTCAAACAATCACTC
CTAGGGAATCTTTGAGAAGGTCATGTAAAAGGGAAAGAGAACCCAGTTTG
GATACTTTTTCTGATTCTGACGATGGAGGAGATGACGAGGTAAGCAATGG
TAGTTCTGGATCTGCTGTTGTCGTCAAGTTTGGACAGTGGAATAAGAAGT
TCAAATCGCTCAGATATCAAGATGATGTTAAGGATAAAGATTTCATCTAC
GATGGAGATTCAATTTCTGATGACGAGCACCAAGAGGAAGGGAAGAAGAG
GAAGAGTAAAACTCCTCGTGTGAAGCCTCAATCACGTGTTAAAGCAGCAC
GTGTTTTGCGTCCTTTCGATGCAGTAACTGAGGAGGATTTGATTCTAGTG
GCTGATCGAACGAGCGATAAACGTTATGATCAAGTGGATGGTACGAGTTG
TCATCAATGCCGTCAAAAGACGGACGACTTAAAAACAGTATGTCGTAGTG
GGCACTGTGTCGGTATACGAGGCCAGTTCTGTGGGCCATGTTTAAAGAAT
CGTTATGGTGAGTGTGCAAAAGAAGCCATCATGAATGCCACGTGGCAATG
TCCGCCATGTCGTGGTATTTGTAATTGCAGCTTTTGTATGAAGAAACGAG
GACGTCGTGCTACAGGTATTATGATCCATGCTGCAAAACAAAGTGGGTAT
ACTGATGTCTCCTCTTTTCTTGGATTGAAAGAGAAAGTCGTCGAATGACG
TTGATACTTTATTAACGTTTTCTTCAATCATGTTGGTTGTTTATATGAGA
TAGACTGAATTTTTCATCCCTTGAACAATAACTGCTTTGCAATCCTACCT
TTGATCTATCTTAGATTTCTTTATTAATTCAGTAGCAAAGAATTTCAACG
TTATTACTTTCAAATGATATTTTCAGTATAATTTTCCAAACAATTGGAAA
AGTTTTTAAGTATTTCATTTACATTTTATTTGTATATAACAAAAATCCGT
GTATTTTTTCATTAAAGCCCAACTTGCCATGTAAACCCTTAATAGATATC
CTCCCAGCGTAGAGGACTATCCGTACCCTTTGCATTTTTTGTCTGTTCCC
TAAGTTCTCCTTTTATCCATTTGCATTATACCCCCTTGCTGTGTTTCCCC
CTTTCAATATCAACCTTTTCCGAACCTCTGTTCCACGTACTTTCGTACCT
TTTAAAGTATTTCTCATTGGTCAATTTCAAAGAAAAATCTTGAGGCATAT
TATATTCAATGGTATGTTATTCTCTTTCTAGGAAAAGATATTTTTAAAAA
TTTTTAATTTAGTATTACGTTCCCG

Coding sequence (CDS) from alignment at sc0000054:318372..328646-

>TCONS_00005634 ID=TCONS_00005634|Name=TCONS_00005634|organism=Clytia hemisphaerica|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000054:318372..328646- (Clytia hemisphaerica)
AACAAAAAATAATGGATTATACCAAAGAAGAAAGTGATTTTGAAAAAACG
CGCAAAGAAAATATCAAGAGAAATGAAGAAGAATTTCAAAAGCTTTTTCC
GGCTATGCTGCTTAAACCCTTCAAAGATTCACCACGTACCACTGAAGTTC
GTCGTGCACGACGCAATAACTTACACAGTATTGTTCAAACAATCACTCCT
AGGGAATCTTTGAGAAGGTCATGTAAAAGGGAAAGAGAACCCAGTTTGGA
TACTTTTTCTGATTCTGACGATGGAGGAGATGACGAGGTAAGCAATGGTA
GTTCTGGATCTGCTGTTGTCGTCAAGTTTGGACAGTGGAATAAGAAGTTC
AAATCGCTCAGATATCAAGATGATGTTAAGGATAAAGATTTCATCTACGA
TGGAGATTCAATTTCTGATGACGAGCACCAAGAGGAAGGGAAGAAGAGGA
AGAGTAAAACTCCTCGTGTGAAGCCTCAATCACGTGTTAAAGCAGCACGT
GTTTTGCGTCCTTTCGATGCAGTAACTGAGGAGGATTTGATTCTAGTGGC
TGATCGAACGAGCGATAAACGTTATGATCAAGTGGATGGTACGAGTTGTC
ATCAATGCCGTCAAAAGACGGACGACTTAAAAACAGTATGTCGTAGTGGG
CACTGTGTCGGTATACGAGGCCAGTTCTGTGGGCCATGTTTAAAGAATCG
TTATGGTGAGTGTGCAAAAGAAGCCATCATGAATGCCACGTGGCAATGTC
CGCCATGTCGTGGTATTTGTAATTGCAGCTTTTGTATGAAGAAACGAGGA
CGTCGTGCTACAGGTATTATGATCCATGCTGCAAAACAAAGTGGGTATAC
TGATGTCTCCTCTTTTCTTGGATTGAAAGAGAAAGTCGTCGAATGACTCA
TTCAAAATCCAATCTTCTTGCTAGAACAAAAAATAATGGATTATACCAAA
GAAGAAAGTGATTTTGAAAAAACGCGCAAAGAAAATATCAAGAGAAATGA
AGAAGAATTTCAAAAGCTTTTTCCGGCTATGCTGCTTAAACCCTTCAAAG
ATTCACCACGTACCACTGAAGTTCGTCGTGCACGACGCAATAACTTACAC
AGTATTGTTCAAACAATCACTCCTAGGGAATCTTTGAGAAGGTCATGTAA
AAGGGAAAGAGAACCCAGTTTGGATACTTTTTCTGATTCTGACGATGGAG
GAGATGACGAGGTAAGCAATGGTAGTTCTGGATCTGCTGTTGTCGTCAAG
TTTGGACAGTGGAATAAGAAGTTCAAATCGCTCAGATATCAAGATGATGT
TAAGGATAAAGATTTCATCTACGATGGAGATTCAATTTCTGATGACGAGC
ACCAAGAGGAAGGGAAGAAGAGGAAGAGTAAAACTCCTCGTGTGAAGCCT
CAATCACGTGTTAAAGCAGCACGTGTTTTGCGTCCTTTCGATGCAGTAAC
TGAGGAGGATTTGATTCTAGTGGCTGATCGAACGAGCGATAAACGTTATG
ATCAAGTGGATGGTACGAGTTGTCATCAATGCCGTCAAAAGACGGACGAC
TTAAAAACAGTATGTCGTAGTGGGCACTGTGTCGGTATACGAGGCCAGTT
CTGTGGGCCATGTTTAAAGAATCGTTATGGTGAGTGTGCAAAAGAAGCCA
TCATGAATGCCACGTGGCAATGTCCGCCATGTCGTGGTATTTGTAATTGC
AGCTTTTGTATGAAGAAACGAGGACGTCGTGCTACAGGTATTATGATCCA
TGCTGCAAAACAAAGTGGGTATACTGATGTCTCCTCTTTTCTTGGATTGA
AAGAGAAAGTCGTCGAATGACTCATTCAAAATCCAATCTTCTTGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003191XLOC_003191Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005634-proteinTCONS_00005634-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005634-exon-sc0000054-1575043694:328617..328646TCONS_00005634-exon-sc0000054-1575043694:328617..328646Clytia hemisphaericaexon
TCONS_00005634-exon-sc0000054-1575043694:318372..319844TCONS_00005634-exon-sc0000054-1575043694:318372..319844Clytia hemisphaericaexon
TCONS_00005634-exon-sc0000054-1510915933:328617..328646TCONS_00005634-exon-sc0000054-1510915933:328617..328646Clytia hemisphaericaexon
TCONS_00005634-exon-sc0000054-1510915933:318372..319844TCONS_00005634-exon-sc0000054-1510915933:318372..319844Clytia hemisphaericaexon
TCONS_00005634-exon-sc0000054-1491911889:328617..328646TCONS_00005634-exon-sc0000054-1491911889:328617..328646Clytia hemisphaericaexon
TCONS_00005634-exon-sc0000054-1491911889:318372..319844TCONS_00005634-exon-sc0000054-1491911889:318372..319844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:318372..328646 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.4127	10.5024	10.3064	7.84444	0	0	0	0	0	0	0	0.0554394	0	0	1.95639	0.857242	2.03278	1.09905	0	0	0	0	8.07498	6.12356	0	0	0	0	6.28727e-10	4.29148
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018866Znf-4CXXC_R1
Blast
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BLAST of TCONS_00005634 vs. Swiss-Prot (Human)
Match: CDA7L (Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.904e-46
Identity = 77/131 (58.78%), Postives = 97/131 (74.05%), Query Frame = 3 
Query:  534 LRPFDAVTEEDLILVADRTSDKRYDQVDGTSCHQCRQKTDDLKTVCRSGHCVGIRGQFCGPCLKNRYGECAKEAIMNATWQCPPCRGICNCSFCMKKRGRRATGIMIHAAKQSGYTDVSSFL-GLKEKVVE 923
             RP + +TEEDL  VA    DK YD+V G +CHQCRQKT D KTVCR+  C G+RGQFCGPCL+NRYGE  + A+++  W CPPCRGICNCS+C K+ GR ATGI+IH AK  GY +V  +L  L++++VE
Sbjct:  322 FRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCATGILIHLAKFYGYDNVKEYLESLQKELVE 452
The following BLAST results are available for this feature:
BLAST of TCONS_00005634 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDA7L1.904e-4658.78Cell division cycle-associated 7-like protein OS=H... [more]
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