TCONS_00005630 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005630
Unique NameTCONS_00005630
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1039

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005630 ID=TCONS_00005630|Name=TCONS_00005630|organism=Clytia hemisphaerica|type=transcript|length=1039bp
ctttttactgtctttttttatttgccTTTTTGGTAACTTACTTCACATTT
CGTTTAAGGAGTCAGTAACTTTAATGGCAACAGATGGAGCTGAAGATAAG
TGTCGACTTTGTGGTAAAAGAATTGATGGTGAAGTTGATAAGTGGTATGT
TCCTTACCACTCCAACTGTTTCAAATGCTCCAGTTGTAAAGTACCTTTAA
ATCCAAGGAATTATTTTTTAACCAACAAAAagcaattttattgttttaaa
catTATGATCATGATGGCCCAGACAAGCATGGACATTTCTTCAGGGAACT
TAAACAATTTCGTAAATATTCTATCGAGAAATCAAAGACTTCGACAGTGA
ATGGGAAAACCTCCCCTGTAAAAcaacattatcaaaaaaatgGACTCGTG
AAATTAGATTGCAAATGTTCAAGTGGAAAGTCTTCAGGTTATTGGTATGA
GTGTACTTTCAGAAATTGTCCTTCATCACAATGTTATCTTAAATCGAGAG
ACTTTAAACATTTTCATGTGGCAACCTGGAAGATCACATCTGGTAAAAGC
ACAACACAAATTGAACACAGTGAAGAAGAACTTTATGAGATGTGCTATCA
TGGACAGAGACATGCCAATTTTTATTCTGTAGATGAACGTATTGGTCCTA
TTGTATTGAGTTTGAAGCATGAATCTATCATGAAAATCCCTTTTTACAGG
ATTCTTCTACGATCTTCATCACACATCACAGAAGGTTTAATCCCAACGAC
CTCATTCTGTTTAAATGACTATGATGATAATGCAGTACTGGAAGTCATCA
GTAGAGAATTGGACCTTACTTCAGACTTGAGACAATTCAATGATTCCATT
CCACCTACCAAATTGCTCCTGTTGGATAAAgtGATGTTGAAAAGTGAATT
CAAAATAGGTGTTGTTTTCGTGGACAAAGATCAGCTCAAAGAGGAGCAAT
TTTTTACCAACACTACACACAGTGACGATTTCGAAGAATTCCTTACATAC
CTAGGCGAAAAGATATCATTGAAAGGATTCAATGGTTNT
Run BLAST on NCBI

protein sequence of TCONS_00005630-protein

>TCONS_00005630-protein ID=TCONS_00005630-protein|Name=TCONS_00005630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
FLLSFFICLFGNLLHISFKESVTLMATDGAEDKCRLCGKRIDGEVDKWYV
PYHSNCFKCSSCKVPLNPRNYFLTNKKQFYCFKHYDHDGPDKHGHFFREL
KQFRKYSIEKSKTSTVNGKTSPVKQHYQKNGLVKLDCKCSSGKSSGYWYE
CTFRNCPSSQCYLKSRDFKHFHVATWKITSGKSTTQIEHSEEELYEMCYH
GQRHANFYSVDERIGPIVLSLKHESIMKIPFYRILLRSSSHITEGLIPTT
SFCLNDYDDNAVLEVISRELDLTSDLRQFNDSIPPTKLLLLDKVMLKSEF
KIGVVFVDKDQLKEEQFFTNTTHSDDFEEFLTYLGEKISLKGFNGX
Run BLAST on NCBI

transcript from alignment at sc0000054:240290..247267-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005630 ID=TCONS_00005630|Name=TCONS_00005630|organism=Clytia hemisphaerica|type=transcript|length=6978bp|location=Sequence derived from alignment at sc0000054:240290..247267- (Clytia hemisphaerica)
CTTTTTACTGTCTTTTTTTATTTGCCTTTTTGGTAACTTACTTCACATTT
CGTTTAAGGAGTCAGGCAAGTTGTTGATTTTTTTATAGTATCGTTTTCAA
TCTAAAGTATTTATCATATTTGCATTTACAGTATATAAAGTAGTAGATCA
GAGTTAGTTCAAAGACCGCTTGTTTTGTTATGCGCCTGCCCTGCGGGGCC
TGCCTTAGACCGGAAACCTGTCCTGAAATTTCCATGCCATTCACTAAGTT
CATTTTATAGAATCTATCAGTGGAAGATGGGGAAATTTTAGCCTGTATTC
CCTGGCTAGGCCTGCCTTTGCTGGCGCTTCTTGTCGCTTCCTGCGGCTTG
GGTCACTGAGAAACCAGTGAGTGGCACTGGCAGTGGCGTGGCTGAAGGGA
ACCAAGGAAGGATTGTCATTACTCAAAAATGCCAGTCTTGAAAGAAGGGA
ATATCTATGAGCTGGAGAATTTCTCAGCGTAGCCTTGAAGTAAGCCTATT
ATGAAATCCAAAGTCTTTATTCCATTTACAGTCGAGGATTATGCCCTAAA
TAAGAGAATACCCAAGTTAGAGGATTACCTTATTTAGGAGATTTTCAGTC
TCTTATTTAAGAGAGCGTTACCTAAACTAGGAGAATTCTGTACGTTTCAC
AAATTTACTTCAGAGCAGACTATTTGCGCAATATGAAAATAAGATCACGT
GAAAGATAACGTTTCCGTGATTCCGATGACCCAAAAACCAAAATAAAATA
CCTTTTCATTCTTTTTCAAACTTCGAAAAACCATAAATAGCCTCATTTGC
ATGTGATGACGTAATTTTTAAAATAATGAAGAAACACCCTTGTCCTTTAA
AACGCGTTTTTTCTAAAACCCCCTTATTTAGGAGAGACAAGAGCGACTCA
CTTTCTGTTTGACCCGCGTTTTGACCGCGCTTAAACGCGTTTCTTAAATA
TGGCCCGATCTATATTATTACTTTTCACGAAATTCTCATGATGTAGATCG
GCCTTTAGATTGGTAGAACCTAACCATCCTAGGTCCACGAAACAAAAGCA
GAACTCAACCAAATTTTGCTAGAAGGGAGAAAAAAACGTGCTGAGTCGAT
CTATGAAGTTCAAAACTTGCGCAAAATGATGAGAAGGCCAAAAATTAACG
AAGAAAAAAAAGTCTCCTAGTTAAGAGAAAGAAATCTCCTACTTAAGAGA
CCTTCTCTTAAATAGAGTATATCTCTTATTTAGGGCATAATCCTCGACTG
ATTTACTACGTGTCATGTATCTATCTCGCTCGGTTTCTCTCCACCACGGT
GTTCCACCGTAGAAGCAGTAGGTAAAAATGCACAATTTAGTACGGTGGGA
GGTTAGAGGAATGTAACTTTTTCAAATTTTTTTCTTTCCTTCTTTTAGAA
TGATTTAGATATTTGAACATAAATATGATATGATATCAATTTTAATTTTA
TGGATCTCTCCTCAGATAGTGGAAGTAATTTGATTTGTGAAGAGTCTTTA
CGTCACATAGAACAAAAGAAAATAGCAAAAGAACAAGGATTTTCCCATAG
CCACCATTTCGCAACCATTGGGAATCGCAATTTTACGGAAATGGGAATCC
TCATATCAAATATTAAAGCATCTTCTGAAAATTTCATTCTTCCCCATAAA
AATGCAAAAATGAAAAACGAAGAAGCTTCGTTTTCTGATCATCTTTTTAC
CATGACAGGCTAGCTCTAAAGCTCTAAAACAGCATCCAATAACATGAAAA
CCAGAATATGATTCTTCAATGGGAATCAAAACTAAAAAGTGTATATACTT
ACAAACATCAATATGTCTGATCTAACAAAATTTATAGCAGCACTGTCATC
ATTGACAATAAAACAAACAATATTCTGTCAAGAGCCTTGTAAACATTCCA
ACAACTTCCATCGAAATGATCTATCACAGCTAGATCTACCATTTTTAGCG
CGGTCCGAGGTTTGAGCCGAGAATGCTCGCAGAACTTTCATTCCTAGAAC
TTTTGCAAAAAAAAAGGAAAAATAGAAAAGTTGTATTTTTTATTATTGCT
CTATTCACATACTGAATTTGAAAGATCTACTATGTGGCGTTTTTTTGCAA
ACTTCAAAAATTGAATGAAGTTTTTATAAATTGATTTTTATTTTTAGCTT
ATGTGGATTTGGCAAAGTTGGTGAGTATGGCAAATTTGGAAGTCAATTGA
ATTGGCTGTAGGTAACTAATTACTGACCTATCAAGAATCAAGGATATCTT
CCTTGCAATGTATTTATTGCAATTATTTGCGGCTGCAACCAATTGCATCA
TATACAATGGATCAAAGATAAAATTTACTAAATACCAGTCAAAGAATTCC
CTCAATTTCAGTATACCACCATCACAGTAGTTTTCATTTGTGTTTAGCCT
ACAGGGTAATAACAAGTATATACGGGGTGCTGGTCCACAAAATCATGAAC
AAACATCGATTATCCAAAATGTAGAAAAAAGCTTGTCTTTATTAAAAGAA
TAAAAATATTTCATCTGTGAGTTAAAAAATATGATTAATTATGTACAAAA
ATCGCCTCTTTTCTGTCTGAATTTTGAACTCTGTTTCTCGTATACTAACT
GTGGTTGTGTTATGAAAAATGTAAAAAAGTGAAGTACAGCAGTTTATACC
TCAATTGCAGTAAAAAATACTACACACTAGTCAAGGGAATTCCTCGACTG
GATTAAAGTACCCTGTATATTTATTTGCATTAGGTAAATGCATTTGAGCT
TTATATACCCTGGACCAAGTTTCTCAATCCTGTCCAAGGAAAATCTTTGA
TAATTATGTTTTTTGAAAAATTGTATCCTAATGGCAGCAACCACCTAATA
GTGGTGTAAATGTATCGAGAGCACTAGGTCTAGCTCCCTCAAATACTTTT
GATGATGTAGCGCCGTTAGACCTTAATTTTTAACACTGCAATGACTTCTT
TGCTGGTCCCCCTTTAAAAAAGCTTGGTCCAGGGACCAAGGTTCCACCAT
AACTTTAGTTCAATTTTCTTGAGACAGTTTTTTCCAAAAAAATAATTTAT
TAATTAACATTTTCTGTCTGAAACCTTGCTCAGATAAGAGAATGAAGAAG
ATTTAACTAAGAAAAATCTGAGTATGAATCTCTTGAATCAGCTTGAATGG
GGAAAAGTTGGAAATGATACCAAGATTTAGCTCATTAAAGTCGCCATTCA
TATATATGCAACAAGTAAGGTAAAGTGTAATTTACTTTGAAAAAGAAATA
TTTGATAGTCTACTGTTCTTTAAAATACTTTTTTAGTTGGAGCAATTCTC
AGCTAATCCAGATGACCCAATTTCCTCATTTGTGTATTTGAAATATCTTT
GAAATACCAACCAGACAGATGTTCTAATGGAGTTAATTGCCTTCAAAAAT
TATCATCTACCAGAAATTGTCATAAAATTGTGTCCTCCCCCCCCCTTCAG
TCCTGACAATTGGCGCCGGCATACGGCAAATGCCGAGGCAAAAGCTGAAT
TAAATTGGATTATAGTGTGTTTGCGTCGGCAAAAAAAATGCCAAGGCAAA
TTTTTCAAAAGACTTTTACTAAAAATGATAACTGCCGAAACAATCGAAGA
ACTGCAATGTAGCAGTGTAACGTCCCCCTACCTCCCTTTAAATTGGGAGA
AATGCCGAGGCAGAATCCTATTCTGCCGAGGCAAACAGCAAATTTAGCCA
TTTGCCTCGGCAAAAAAATGCCGAGGCAAAAAAAATTGAATTGCCAGGGC
TGAACATTAATCTTAAAATCGCTTTTATTGTGCCAGGGCTCAAAGCCAAA
AGAAAAATAAGCGGGCGGAACCGCATTAAGCAGGACACTCCCTCATTTAA
GCTTGTCGTTCCGAGTTCCGCTCGCATACCTTAGATGTCCCGCATTTTCG
AGAAAACTCAGAAATTCGTAGAACTCTTGGAAAAAATATAGAAATGCTAC
TAAAAGTAAAAATATGTTTCCACAAGCACAAACTCACTTCTTTGTTTTTT
CTCTTCGCTCCGTAGCGGTCCGTCCAATTGCGTNNNNNNNTTAAAGATTA
ACCAATTTTTGTTCTATTTTGTCTACTATTCCTTTTGCAGCAAAATTTTA
CGTTTGTGTCAGGTTGAAATTTGAGAAATTTACACAGGTATATGGGGGGA
ACACTGATATTTTCAGAATTTTCTGGGGGGAAAGCAAAAAAGAGGGGGGA
AACTAAAAAACTGAAAAGTCATAGGGGGAAAAAAAAGAGAGGGGAGATTC
AAAAAAATCTTGTTTGGTGGGGGGAACAAACCCTGGAGGACACTATGAAA
TTGTAGCATTGCTGGTAGCAGGCTGGTGTTCTTAGCTAACTGCATTAGAA
ATTAGCTGTTACAAGTTAGATTGTTAAATTTATTGTTCCAGAACTGGTAT
TTTAACCGAAAAAAAAAAATTTATTGAATGTTTTTAGAAAGAAAGAGGTA
TTGGTCATTCATAAGCTTGGCATTTGAAATTGTGGTATTGAAGTTATTAG
TCGGCACTTTTTCCACTCTATTTTCCAGCTACTTTTATTACACTGGGCTA
CACCAAACAAATAACCGGCTGATTGCCAAAAAAAATAAAGCCTTTTTTTT
AATTCAACACATTTTTGGTAATGTTTTCAGGGAATATTTCTCTTATATTT
TTGAGTGGGAAATGAGGAATCAGACAGAATCAGAAGGTCACTTTAGTTTT
GATTTTTATTAATTTTTCTTAATATCAAAGCTAACTTGGATTTTGATAAG
GCTGTTCCTTAACTAAAAGTTACTTTAATAAAAGATTAAAAACATAAATT
TCTCTTTTGATTGCAGTCAGTGTTATTGTCCATCAGTATACAGTAAGAAT
TTAAGCTTATTAAAAGAAAGATGCAGGCAAAGAAGAAAATTGTGCAATAC
CTTTAATCCTTTTTGATAAAACACCATTTAACTTTCATCTAATGTGTTAA
TAATATTCAAATTGAACCCTTACAAAAAGTAATTGTCGCTCAAAATTACA
AGTTGAATACAACTTTATTACTTCATTAAAAGTGTTGCATTATTTTTATT
CTTCGAAATCTAAATTTTTGTTATTTTATAACTATCTAGCCTTTTTGAGC
TGCTTTGGTTTATTCCCTCCAGGAGCAACCTACTGTTCATTGATCATTCT
ACTTTTCTTTTTCTGTAATTATCAAAAAAGAAAGGAATTTCTAATTGAAA
CTGTCAACAATGGATATCAATTCAACTTGCTATTAATTTTTTTCAAAGGG
GGGATATCACTTAATGGGCTTTGTCTTTTTTAATATTGTTTTGTTGTGAA
AGGAAAGCTCTTTTAAAATCGACTTTTTGAATACATTAAGTTTGTAAATA
AAAGAAAGACAGCAGTCATCAGTTAGAAGGTTGAGTTTAAAAATATGATG
ATTTAATTGAAATGTAGAGGCATATTTTTGAACCTTTGGTTAGGATGAAG
TACTTACATGAAATCAAAGTTAATACTGACACTTCTAATGTATTTACAGT
AACTTTAATGGCAACAGATGGAGCTGAAGATAAGTGTCGACTTTGTGGTA
AAAGAATTGATGGTGAAGTTGATAAGTGGTATGTTCCTTACCACTCCAAC
TGTTTCAAATGCTCCAGTTGTAAAGTACCTTTAAATCCAAGGAATTATTT
TTTAACCAACAAAAAGCAATTTTATTGTTTTAAACATTATGATCATGATG
GCCCAGACAAGCATGGACATTTCTTCAGGGAACTTAAACAATTTCGTAAA
TATTCTATCGAGAAATCAAAGACTTCGACAGTGAATGGGAAAACCTCCCC
TGTAAAACAACATTATCAAAAAAATGGACTCGTGAAATTAGATTGCAAAT
GTTCAAGTGGAAAGTCTTCAGGTTATTGGTATGAGTGTACTTTCAGAAAT
TGTCCTTCATCACAATGTTATCTTAAATCGAGAGACTTTAAACATTTTCA
TGTGGCAACCTGGAAGATCACATCTGGTAAAAGCACAACACAAATTGAAC
ACAGTGAAGAAGAACTTTATGAGATGTGCTATCATGGACAGAGACATGCC
AATTTTTATTCTGTAGATGAACGTATTGGTCCTATTGTATTGAGTTTGAA
GCATGAATCTATCATGAAAATCCCTTTTTACAGGTAATTAATTCCCCTTA
CAGATGTTTTGAGTCACAAACTAAGGGTCTACCCTTCTCTAGCTGATAGA
TATCTTCAAAAGTTTTTTTATTCAGAAGACAGATAATGCACTCAGTGGCA
TAGATTGTGGTGTTCCTGGAGTATCAACCATACACCTATCTACCTGTACA
GGACCAAGAAAGACTGATCTGATAAAATTTCTATATCAGTTTTGGTCAAA
ACTATCAGTTTTGGTCAAAACTGATATAGAAATATAGTCTATCTCTTGAA
TTTTTTCTTTTTGATTCTTTTTTTTTCTTCATTTAAATAGGATTCTTCTA
CGATCTTCATCACACATCACAGAAGGTTTAATCCCAACGACCTCATTCTG
TTTAAATGACTATGATGATAATGCAGTACTGGAAGTCATCAGTAGAGAAT
TGGACCTTACTTCAGACTTGAGACAATTCAATGATTCCATTCCACCTACC
AAATTGCTCCTGTTGGATAAAGTAAGAAACAGATTGATCATTATAGTCCA
TTGATATGATGGTATTTGATGAGCACTCAGCCAATTGGTCAATATAGTCC
AATGGTATATGTAATAGTATTTGCACTCAACCCAATATTCCAAAATAAGA
TTGGTATATTTTATTCTGCTAAATCTGACTTTGCAATCTTAAATTGTAAA
AATAATTTCTTTTTTCCAGGTGATGTTGAAAAGTGAATTCAAAATAGGTG
TTGTTTTCGTGGACAAAGATCAGCTCAAAGAGGAGCAATTTTTTACCAAC
ACTACACACAGTGACGATTTCGAAGAATTCCTTACATACCTAGGCGAAAA
GATATCATTGAAAGGATTCAATGGTTNT

Coding sequence (CDS) from alignment at sc0000054:240290..247267-

>TCONS_00005630 ID=TCONS_00005630|Name=TCONS_00005630|organism=Clytia hemisphaerica|type=CDS|length=4152bp|location=Sequence derived from alignment at sc0000054:240290..247267- (Clytia hemisphaerica)
GTGATGTTGAAAAGTGAATTCAAAATAGGTGTTGTTTTCGTGGACAAAGA
TCAGCTCAAAGAGGAGCAATTTTTTACCAACACTACACACAGTGACGATT
TCGAAGAATTCCTTACATACCTAGGCGAAAAGATATCATTGAAAGGATTC
AATGGTTNTGATTCTTCTACGATCTTCATCACACATCACAGAAGGTTTAA
TCCCAACGACCTCATTCTGTTTAAATGACTATGATGATAATGCAGTACTG
GAAGTCATCAGTAGAGAATTGGACCTTACTTCAGACTTGAGACAATTCAA
TGATTCCATTCCACCTACCAAATTGCTCCTGTTGGATAAATAACTTTAAT
GGCAACAGATGGAGCTGAAGATAAGTGTCGACTTTGTGGTAAAAGAATTG
ATGGTGAAGTTGATAAGTGGTATGTTCCTTACCACTCCAACTGTTTCAAA
TGCTCCAGTTGTAAAGTACCTTTAAATCCAAGGAATTATTTTTTAACCAA
CAAAAAGCAATTTTATTGTTTTAAACATTATGATCATGATGGCCCAGACA
AGCATGGACATTTCTTCAGGGAACTTAAACAATTTCGTAAATATTCTATC
GAGAAATCAAAGACTTCGACAGTGAATGGGAAAACCTCCCCTGTAAAACA
ACATTATCAAAAAAATGGACTCGTGAAATTAGATTGCAAATGTTCAAGTG
GAAAGTCTTCAGGTTATTGGTATGAGTGTACTTTCAGAAATTGTCCTTCA
TCACAATGTTATCTTAAATCGAGAGACTTTAAACATTTTCATGTGGCAAC
CTGGAAGATCACATCTGGTAAAAGCACAACACAAATTGAACACAGTGAAG
AAGAACTTTATGAGATGTGCTATCATGGACAGAGACATGCCAATTTTTAT
TCTGTAGATGAACGTATTGGTCCTATTGTATTGAGTTTGAAGCATGAATC
TATCATGAAAATCCCTTTTTACAGTTTTTACTGTCTTTTTTTATTTGCCT
TTTTGGTAACTTACTTCACATTTCGTTTAAGGAGTCAGGTGATGTTGAAA
AGTGAATTCAAAATAGGTGTTGTTTTCGTGGACAAAGATCAGCTCAAAGA
GGAGCAATTTTTTACCAACACTACACACAGTGACGATTTCGAAGAATTCC
TTACATACCTAGGCGAAAAGATATCATTGAAAGGATTCAATGGTTNTGAT
TCTTCTACGATCTTCATCACACATCACAGAAGGTTTAATCCCAACGACCT
CATTCTGTTTAAATGACTATGATGATAATGCAGTACTGGAAGTCATCAGT
AGAGAATTGGACCTTACTTCAGACTTGAGACAATTCAATGATTCCATTCC
ACCTACCAAATTGCTCCTGTTGGATAAATAACTTTAATGGCAACAGATGG
AGCTGAAGATAAGTGTCGACTTTGTGGTAAAAGAATTGATGGTGAAGTTG
ATAAGTGGTATGTTCCTTACCACTCCAACTGTTTCAAATGCTCCAGTTGT
AAAGTACCTTTAAATCCAAGGAATTATTTTTTAACCAACAAAAAGCAATT
TTATTGTTTTAAACATTATGATCATGATGGCCCAGACAAGCATGGACATT
TCTTCAGGGAACTTAAACAATTTCGTAAATATTCTATCGAGAAATCAAAG
ACTTCGACAGTGAATGGGAAAACCTCCCCTGTAAAACAACATTATCAAAA
AAATGGACTCGTGAAATTAGATTGCAAATGTTCAAGTGGAAAGTCTTCAG
GTTATTGGTATGAGTGTACTTTCAGAAATTGTCCTTCATCACAATGTTAT
CTTAAATCGAGAGACTTTAAACATTTTCATGTGGCAACCTGGAAGATCAC
ATCTGGTAAAAGCACAACACAAATTGAACACAGTGAAGAAGAACTTTATG
AGATGTGCTATCATGGACAGAGACATGCCAATTTTTATTCTGTAGATGAA
CGTATTGGTCCTATTGTATTGAGTTTGAAGCATGAATCTATCATGAAAAT
CCCTTTTTACAGTTTTTACTGTCTTTTTTTATTTGCCTTTTTGGTAACTT
ACTTCACATTTCGTTTAAGGAGTCAGGTGATGTTGAAAAGTGAATTCAAA
ATAGGTGTTGTTTTCGTGGACAAAGATCAGCTCAAAGAGGAGCAATTTTT
TACCAACACTACACACAGTGACGATTTCGAAGAATTCCTTACATACCTAG
GCGAAAAGATATCATTGAAAGGATTCAATGGTTNTGATTCTTCTACGATC
TTCATCACACATCACAGAAGGTTTAATCCCAACGACCTCATTCTGTTTAA
ATGACTATGATGATAATGCAGTACTGGAAGTCATCAGTAGAGAATTGGAC
CTTACTTCAGACTTGAGACAATTCAATGATTCCATTCCACCTACCAAATT
GCTCCTGTTGGATAAATAACTTTAATGGCAACAGATGGAGCTGAAGATAA
GTGTCGACTTTGTGGTAAAAGAATTGATGGTGAAGTTGATAAGTGGTATG
TTCCTTACCACTCCAACTGTTTCAAATGCTCCAGTTGTAAAGTACCTTTA
AATCCAAGGAATTATTTTTTAACCAACAAAAAGCAATTTTATTGTTTTAA
ACATTATGATCATGATGGCCCAGACAAGCATGGACATTTCTTCAGGGAAC
TTAAACAATTTCGTAAATATTCTATCGAGAAATCAAAGACTTCGACAGTG
AATGGGAAAACCTCCCCTGTAAAACAACATTATCAAAAAAATGGACTCGT
GAAATTAGATTGCAAATGTTCAAGTGGAAAGTCTTCAGGTTATTGGTATG
AGTGTACTTTCAGAAATTGTCCTTCATCACAATGTTATCTTAAATCGAGA
GACTTTAAACATTTTCATGTGGCAACCTGGAAGATCACATCTGGTAAAAG
CACAACACAAATTGAACACAGTGAAGAAGAACTTTATGAGATGTGCTATC
ATGGACAGAGACATGCCAATTTTTATTCTGTAGATGAACGTATTGGTCCT
ATTGTATTGAGTTTGAAGCATGAATCTATCATGAAAATCCCTTTTTACAG
TTTTTACTGTCTTTTTTTATTTGCCTTTTTGGTAACTTACTTCACATTTC
GTTTAAGGAGTCAGGTGATGTTGAAAAGTGAATTCAAAATAGGTGTTGTT
TTCGTGGACAAAGATCAGCTCAAAGAGGAGCAATTTTTTACCAACACTAC
ACACAGTGACGATTTCGAAGAATTCCTTACATACCTAGGCGAAAAGATAT
CATTGAAAGGATTCAATGGTTNTGATTCTTCTACGATCTTCATCACACAT
CACAGAAGGTTTAATCCCAACGACCTCATTCTGTTTAAATGACTATGATG
ATAATGCAGTACTGGAAGTCATCAGTAGAGAATTGGACCTTACTTCAGAC
TTGAGACAATTCAATGATTCCATTCCACCTACCAAATTGCTCCTGTTGGA
TAAATAACTTTAATGGCAACAGATGGAGCTGAAGATAAGTGTCGACTTTG
TGGTAAAAGAATTGATGGTGAAGTTGATAAGTGGTATGTTCCTTACCACT
CCAACTGTTTCAAATGCTCCAGTTGTAAAGTACCTTTAAATCCAAGGAAT
TATTTTTTAACCAACAAAAAGCAATTTTATTGTTTTAAACATTATGATCA
TGATGGCCCAGACAAGCATGGACATTTCTTCAGGGAACTTAAACAATTTC
GTAAATATTCTATCGAGAAATCAAAGACTTCGACAGTGAATGGGAAAACC
TCCCCTGTAAAACAACATTATCAAAAAAATGGACTCGTGAAATTAGATTG
CAAATGTTCAAGTGGAAAGTCTTCAGGTTATTGGTATGAGTGTACTTTCA
GAAATTGTCCTTCATCACAATGTTATCTTAAATCGAGAGACTTTAAACAT
TTTCATGTGGCAACCTGGAAGATCACATCTGGTAAAAGCACAACACAAAT
TGAACACAGTGAAGAAGAACTTTATGAGATGTGCTATCATGGACAGAGAC
ATGCCAATTTTTATTCTGTAGATGAACGTATTGGTCCTATTGTATTGAGT
TTGAAGCATGAATCTATCATGAAAATCCCTTTTTACAGTTTTTACTGTCT
TTTTTTATTTGCCTTTTTGGTAACTTACTTCACATTTCGTTTAAGGAGTC
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003189XLOC_003189Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005630-exon-sc0000054-1575043694:247203..247267TCONS_00005630-exon-sc0000054-1575043694:247203..247267Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1575043694:241135..241768TCONS_00005630-exon-sc0000054-1575043694:241135..241768Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1575043694:240647..240827TCONS_00005630-exon-sc0000054-1575043694:240647..240827Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1575043694:240290..240448TCONS_00005630-exon-sc0000054-1575043694:240290..240448Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1510915933:247203..247267TCONS_00005630-exon-sc0000054-1510915933:247203..247267Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1510915933:241135..241768TCONS_00005630-exon-sc0000054-1510915933:241135..241768Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1510915933:240647..240827TCONS_00005630-exon-sc0000054-1510915933:240647..240827Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1510915933:240290..240448TCONS_00005630-exon-sc0000054-1510915933:240290..240448Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1491911889:247203..247267TCONS_00005630-exon-sc0000054-1491911889:247203..247267Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1491911889:241135..241768TCONS_00005630-exon-sc0000054-1491911889:241135..241768Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1491911889:240647..240827TCONS_00005630-exon-sc0000054-1491911889:240647..240827Clytia hemisphaericaexon
TCONS_00005630-exon-sc0000054-1491911889:240290..240448TCONS_00005630-exon-sc0000054-1491911889:240290..240448Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005630-proteinTCONS_00005630-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:240290..247267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.46229	4.33497	2.47938	2.50951	34.1663	26.1003	25.1142	28.2448	18.1179	19.3189	14.5074	18.39	19.6721	18.0678	12.1843	13.831	16.589	19.7006	14.6765	17.3549	18.3908	17.3562	16.6966	19.6942	11.697	7.84565	20.631	15.9505	17.0794	20.9298
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
IPR000331Rap_GAP_dom
Vocabulary: Biological Process
TermDefinition
GO:0051056regulation of small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051056 regulation of small GTPase mediated signal transduction
molecular_function GO:0005096 GTPase activator activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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