TCONS_00005604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005604
Unique NameTCONS_00005604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2535

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005604 ID=TCONS_00005604|Name=TCONS_00005604|organism=Clytia hemisphaerica|type=transcript|length=2535bp
tttgcaaatattattttcatgaaaagcgggaacatcatagcaaaatatat
gcaaacgtacggcatgaatactttgtctgcttcatttttcttatagaaac
agaacactcaaggggacagagatggatttctattatgaacagtttacaat
agaatagacaaagaagcaatccgctaaggaattctcgtccttcatccagc
tacgctataacatatccctggctGAAGGATCAATGTTACTGATTGTATTG
ACTGAAATGGATACAACTTGAATCTTGCTGGAGAAGAATATAAATTTTCC
GATTATGCACCTGGGAAATGTGCAAGGCGTCCCATTGACCATAGTGAATG
GCAATAGCAGCTGAAATGAAGATTTCGTGTTGATATACTTTGGAGCAATT
TCATCCATTAATCACGGAAGAGTTATATGGGCTGGTGAAAAGAAGAGGCG
ACTTAGTCGTTTTTTTGGGATCGATGTTATTTAAAGAATTGGCTTGCTTT
ATCGTTGTTAGTCATTTTAGTCGACTAGCTTACAATCAAATGTGGTGTCA
ACTGAAAAAAGCATTTATATGGACTCAAAAGGTATTCGATTGAGTTGGAA
GAGCAATTTGTAAAGCTGCTGAGTTAGAAACTGACCAAACCAATGTATTT
TTAAAAATGACCGATGGTTTTGATGACTGAAGTATTCAATGAAAATGGTG
AAGGCTGGTGAAAGCTGAAGAAGTCTTTGaaaaatgacCGATGGTATGAT
GACTGAAGTATTCAATGAAAATAGTGAAGGCTGGCGAAAGCTGAAGAAGT
CTTTGGAATCGATTGCGAAAGAATTGACGCTGATGTGCTGTTATTGGTAT
CATAATGACCGAAACTTCACACGTCTTTGTTGACAAACAACCAAACATTT
GTTGACAAGTAACTTAtcacaacaaaataaaattggACCTTGCCTTTTCG
CATTCTGAAGATTGGTAGTGCCAAATCTGAACTGAAAGGCTAATTTCGTT
ACCCATGTGACAGTTATCTATGGAAGGTTGCCGATGTGATATAGAGAGTG
TGTATATGATGTGTATTACCACCGATGTGAAATTGGTTTAACAAGCTGAA
TGAATTGGACTCGTTGAATATTGCTCAGTATTGCAGTTCCTTGGGCAGAT
GTCATGAACACGGTATCGATATGGAGCTATTGGTCGCGTAATATTTAAAT
TTATCCTTGTTTCTCTACTTTAGGAACTACACTTCTTTCTTGTATCCGCA
AGCCAGGTTTTCTACTTATCTTTGGGTTAGAGGTTTCTTAGAGGCGTTTA
GTCTGAAACGAAGCTACTTTTTAGGCAGATTTTCGCATTTTACGAGTCGT
AATGAGTCTTTTCAATGAGCTATCCCAGAAATAACTTTGTATTAAAGTGA
TGGGATCAAGTGATTGGATTCTTATTGACTTTTGGACAccactgaatttt
ttattgtttggacTCATTTTTATTGCCCCGATCGTAGATTCTTTTTTATT
CTGAAAGCTGTGGACCCGCTGGATGTCACACCACGACACACTGGTTTATC
TGGGATAGCTCAATAATGGTATTCAGCATTTCTTTTGACATTTTAGAGAA
ATTTCTTGAGGTATCGTAATGAGTTCTACTTAAGAGCGACACTTTAAATT
ATATTTACTACGAATTTTTACATCAATCTCTGCTAGCAAGTTCTAATGAC
TAATTTTCAAAGTTATCAGATTCGAAACTTCTTTACTGGATTTAGGGAAA
GGAAAACgagaaaactttcaaaagttttaaaattgatcCACCATTATTTG
GCCTGATTATATCATGCTAGATTGAGTTAATCAAGTTCGGCATTTCTTTC
AtctccaaaatcaaaacaatttcgTGATGCAAACATACGAAATTCTATGA
CAGTCAAGTGTCAGCTGGGTGGTATTTTACAATCTTTGGATAGACGTGTT
TAGGTTTTCGGccaattgataaaaaaactatGCTTCAGAGTTCAagcttt
cttagagaaagctctttctttgattttatcaaGGCGATTCAATATTGGAG
GGTGTGTTTGACTACGACCAATGACACATAAGCTAACTCTCGATATTTAG
AAATCTAGGACCTAGGTACAGCAGAGGGTGTCTCAGGGCGGGTTCTTTGA
CCCAACGGATCTTGAGCAGAAATAAGGATAGAAATCCGAGACACGAGTTT
GACTGAATGTTGAATGTTTTATTTCTACAATTGTTCGTTTCCGGTTGTAT
GTCTTAACCATGATTTAacaacatatttatttttgttttcaaatttatat
ttttcgaTTCGTATTTCTAGAAGTATGTTCTTTTCCGATTCTAGCAAAAG
CTGCGATAGGCCGTGCATGATAGCCTCCGAATCTTGACCAAGGCTTACTT
TCATAATCTCAATCAATCGATAAATcgtacaaacttttgtgaaCAGAATC
TTGCCTTATTCCCGCTagtaaatatctttaaaattcttaaaaaaggCGAA
TGTTTATGCAcgcgaaaaattgaaaatctaaaaag
Run BLAST on NCBI

transcript from alignment at sc0000054:753464..767963+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005604 ID=TCONS_00005604|Name=TCONS_00005604|organism=Clytia hemisphaerica|type=transcript|length=14500bp|location=Sequence derived from alignment at sc0000054:753464..767963+ (Clytia hemisphaerica)
tttgcaaatattattttcatgaaaagcgggaacatcatagcaaaatatat
gcaaacgtacggcatgaatactttgtctgcttcatttttcttatagaaac
agaacactcaaggggacagagatggatttctattatgaacagtttacaat
agaatagacaaagaagcaatccgctaaggaattctcgtccttcatccagc
tacgctataacatatccctggctGAAGTAAGTCTACTTATTATAAACTCA
CAGCTCAAATACCCAGACCCAGACAGTGTAATccctatttttaaaaacct
GGTATAATCTAAAAGTTGGAACATTTTAGCTTGGATCGTTGGAAAGCTTT
GTTTAAGATATGTCTTACTAGTTAAATGTAGCTGGGTAGTGCAAAAAGAG
TTATTAAGTTTAAGTTGGGGAAACCTTTAACCATCCCCAAGGCCCACGTC
ATCGGCTcacatttttcaataaaaagttattttcaagaTATCATGATAAT
TGCAAAAGCTTCATTTCTGGGCAAAGTCTGAAACAGGGTCATCTTAAGGC
AAACGAGGGGGGGCAAAATCGAAATTCCCCCCGTCGGCGCAAAGCATGGT
TTCTCCCTCCACCATCATCTATTATGGCATGGACCCTGACTTCCTATGGA
AAATTTCCctctcttttgttttttttatactcAAATAAGTACTGGTTTTT
ATTCCGGGGAGTACTTATTTTCTGTTACACCAACATCAACATCAAGATCG
TAGATAGTAAGCACACGAAACAATCGAGCCAAGGACACGAATTAGGCACG
TGTTTTTGAGTATACTGTCGATATATCATATTTACAATGaatatgaaaaa
tacaaataggaatttagaatgtttttcttttttttttggttgacGATTGT
TCGTTTTTATTCTCGATTATTGGAATCGTCTTGTCAAAGGTGTATTGATG
AAGAAGTTGTTTTCTGGTTCAATTGACGGCggtgaaagatttttgaaaga
tGAAGCACAGTCCCCATCAAATCCGGCACCGACCAGTGATCTTTCCATTT
TTCTACTTCCATCGTTCTTTTGCAAACGAATGGGTCTCAAAGACTTCGGA
AGCTTCCGTTTCAGTTTTGAGAGATCTTTTGCTGCGTCGTTCATTTCGTT
TTCGATAAGCTTCTTTTTGTCTTTATCAGGGAAAGCTTCCTTTTTTAACA
ATTTGAATTCTGTctttaagaattttaaaagagattttttattttcaatt
tctttttgcagaataagaatatcttcttcAGTGGGGTTGTCTTGCAAGTT
TTGATTTGTTGTGGCTGCTTTTGAAGTGATCTTTTCTTCTTCGACTGTTT
GTCTATTGTTGGGGTAAGCAGCTGGCTCTTTGCACGGGATAAATGAGCTG
ATTTGCTTTGATCTATGATCAATAGTGCAGTGACCATTTCTAACGGTAAC
AGTGTCAAGATTTCGAGATGCACCTTGGCTTTCAAAGCTCTGGACGTTGT
TGTTTGGGTTAACTTGGCTGACATGCAATTGTGGCATGATTTGACAGTTA
GGAGAGTCCATCCTTTGGTTATTTGGCAGAGCAAAATTTTGATGAGGTGC
ATTATTGGCTGCGAAGATATGTTCTTCAAAAGTTTTTACCTCTTCTCCGT
GATGGTGGAAAGAGGTTGGAAGAGGTTCTTCTGAGAGATCTTCCATTTCA
ATATCATTGTCATATTTCATCTCTTCTCTGTGATCTTGTTCAATATGGTC
TGCAGTGAGAGGCTCCTCTGAAAGATCTTCCATTTCAATATCATTGGGGT
AAGTCGAATCGATCATGAATCGGCTCCCGAACGATTCGAATCGATCCCAT
CGTTCCTTAGATGCGAATGGAATATTTTCTTGACTTTGATTGAAATAGTC
CACTGCTTGTTGGAAAGTTTGTGGAGCGTTATCTGTAGACGTGAACAGAG
GAAGGGGTGTTTTTTGGGTGTCTTTTAGCGATTTGAATGGGTTGTTTGGT
GGCGAGTTGAATGGGTTGTTTGGTGGCGAGTTGAATGAGTTGTTCGGTGG
CGAGTTGAATAGGTTGTTCGGTGGCGAGTTGAATGGGTTGTTCGGAGGCG
AGTTGAACGGGTTGTTTGGTGGCGACTCGAAATGGTTGTTCGGTAGAGGG
AATTGGTTTCCATTCATTACAATGTTGTATTCGTGTTGAATGTGATTGAT
CATTACTCTCTTTTTCTCCGGTGTTATGAATGGATTGTTGTCTACCTTAG
CACGTTCTTGTTGGAGTTGGAGATATCTTTGGTACAAAGAATGGAATTGT
TCTGCAGACATTTCCTCCTCGTCAACTTCCATAGGCTCGACCTAATGAGG
AGAAAAGAAGGATTCATTATTTTGCTAAGAGATATTACAGTGTATAGGGA
AAGACGATGAATATTGTGTACTTTGTCACCCACGACAAAGTACAATGAAC
CTAGAGATTTTGGCGTACAAAGTAACGGTTTGGAATTTTGATGATTAAGG
AAATTTGTAATAGTTGTAGATAACTTAGGGAAACTGTTGTTAAAGCTATA
AGTATATAGTTATTGGCAGCGCGTACTGTCAACCTTTAACCCGAATTGTG
TAATACTTGTATGCCTATCTAGTGTCTAAGATTGCGTATAATGAGTAAAT
TGTAAAGATTGTTGTCAGACGATGATCGTCTACGACTTTAACATGATAAA
ATCTAATGAGCCACATACCTCATTATGCTCATGGTGGTCGATATCCATTG
GTTCTTCTTCACACTCCCTTCTGATTGGTTGTCTACCATATTCCTCGCTT
CTTAATGGCTGTTCACTGGAGTTTTTGCTTGCAATTGGCTCTTCACTGGA
GTTTTGGCTTGCCATTGGCTGTTCACTGAAGTTTTTGCTTGCCGTTGGCT
GTTTACTGGAGTTTTTGCTTGCCATTGGCTGTTCACTGGAGTGATGGCTT
GCCATTGGCTGTTCACTGGAGTGCTGGCTTGCCATTGGCTGTTCACTGAA
GTTTTTGCTTGCCATTGGCTGTTCACTGAAGTTTTGGCTTGCTATTGACT
GTTCAATATTATCAATAGCTTGATCTTGTTGTTGCAATTTGGCAAGctat
aacaaaaattaaaaccttacaatttttttattgaatcaaACCTGAATTTG
ACTAGTCTTTTTTGTCGGACGATAGGCAAAAACACCGGAGAtgaatttca
aaatctaaataCCTATTTTTTAAAGATCCCCTGTGGTGCTACTTCATGCA
AATGTAGCGCGAAATATAGCACAAGTCAAATAACGGTTTAAATCTTTCAG
AATCATAAACTACGCCAGAGCCTTGTGCACAAACCACAAACCGCCACTGT
ACTATCTATGCTCGAAAGCCCCATACTTTAACGAATCGGGAGGTAATTAT
AACCAAACAAACCTTTTCCTGTTCCGCGTGGAAATCGTAATGGATTACTG
ATTTGCCAGATGCTTTCTGTGAACGAGAAATATCTCGAAGCATCATTTGC
ATCAGTTGCAATCCACGTTTGATGGTTCGTGTGGTGTAAAGACCACGTTT
CTGTGATCTTTTGTAAAATAATTTATACCGTCGTCTTGCAAGAAAGAGTT
TTTTGCGGCGGTTGATGTGTTGTTGAACGGTGATTTTTCTTTCACTGATT
CGTACGCTGCCGACACGTACAGGTTCTTTGAAGACCTTGCGCTTCTTTGT
TGCGGAGACAAGAGATTTGTCTTCTGGACCATTGGTTAAGCGCAACCgtc
tttttcgatttttggaatgaTTTGTATACattattgctccggcctaggag
ccttaaattctctctcgtccgaagacgacgacggtcaagacattttttgt
ttgtttatttaatccgatgatctattccgaattaataaaaacggattatc
tgattCCAATAATACtatgatttgattggccgaaagggAATTCCggccga
aagtatttaagaaaaagatggctgccgaaagtggatTAGAGAATTGGATT
AGCTGACTGTGTCgtaaatctcagtgaaaaattgatcattttcatcatta
ttcatgatgttttggactagatttatgagaagtttgatgcatactggctc
tctaacaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGgtgtaacttgacaatgaaactttcaaacacacatccattggaattt
aaAAGAGAATACTAAAATTACAACATTACAGTGAAAATTTGAAAACGATC
TGAGTAGTTTTTGTGGTGTTctgtttatggctgaaaatgatcctttgtat
tcatcattgttgaCTCTGCCTGACGACCGCtccttttgattcttcaaacc
cgacacatattttttacaaacatatgacTATGataattcaataaaggata
ctaaaacacaattccagtgtaaatttgaacaagaatggAGAAATCTTCAG
agttttatggctgaaaatgatcgtttttggactttgccgtaatttcattg
cggctggcgaccgttccttttgatttttcaaacccgacacagatttttta
caaacatatgactatgagaattcagtaaaggatactaaaaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGCGaacgttccttttgatt
tttcaaacccgacacagattttttacaaacatatcattatgagaattcag
taaaggatactaaaacacaattcctatgaaaatttgaacaagattggaga
aattttcacagtgttatggctgaaaattatcgTTTTTGGGCTTTctcgta
atttcattgcggctggcaaccgttccttttgatttttcaaacccgacaca
gattttttacaaacatatcattatgagaattcagtaaaggatactaaaac
acaattcctgtgtaaatttgaacaagatcggagaaattttcagtgttatg
gctgaaaattatattttttggactttgtcttaatttcattggctggctgg
ctggggcgaccatcccttttgaagatttttcaaacccgaaacaggttttt
tccaaatataccactatttattacatacacactattgtaccattttaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTGTGGGCAACATTCTAACaaaactaactcaacaagctcatctttc
acatctttgaatctcttaagccggagcttccagcgcagctggtttattaa
cAATTATACTTGGCTATTATACTTTATATAACAACTAAACATCAGGACAT
ACATAAAGCTGTATGCACTGACCAGGGTTTTAATCCAAAactgaattttt
tcaaattgctTTTGAAAATGTAGACGGgatatttttatttgacgtcactt
tttttgTTCTTGACGTCATTGATTTTCAAATGTACCGTGCGCCTTTACGA
TCCAATCCATGCGCGCGGCAAAATTTAGGAATCTttctatttttgatttc
ttgatGTCTATTTACGACTAATAAAACACGGTTGTAGAATCGAATGATTC
TTGATTCCccgtgagaaaaaaatcaaaagagacCTTTGGTTAGCAATTTA
ACTCATTGCcttgattaaatcttaaaaataaaaccgtTTTCCAACGAAAA
TCTTGCCTTGGTTTTAAAAAAGTGCATTTCAGTTTCTGCTCGCCATCTAT
CCGGTTTTTTACCTACCTTTTTTCGCCAGCTTGAAAACTGTGTATCACCT
GTGtttgacaagggtttaaaaaaggaactttttttttcaatctgataaaa
acaaagaaatggacTATTCTTTGTGACTTTCTCACTTTTTCCTGAAGTAT
TGTCATTTcaactggacggcatatttaacgcgaacaaataactacctgca
gagtcgtttcaGACGACACTGGTACAGTTAAACGATGCTTTTTCTGATAA
CTTTTTGACTTAAgcaaaaaattatgtcacgggggggggggcagtacacg
atccaaatatggttaaaagaaaaCAGACCCGGGGAtggtaaaattcaaaa
ttttaaaagtttttttttttttttaaaaaaaaaattttttttgggggggg
gggggggggcagtacacgatccaaatatggtgaaaagataagacacccgg
ggATGGTAAGAGTCAAAAGTTttagagatttctttttttatttgatcgtg
CTTTTCGGCCAGCTTTAACATCCAAAgaacttttagtgcgttcagctaca
gcttaaccagcgtgcgacgccgggtaccggctagtattattataaatttt
taCACAATTATTTCGTGCTTCATTGGGGAATCATTTAATGTTTGATAGCG
TATTGCaagtaatgacgtcattttcgtTTACACCCTCCGCTATCTTTCCT
TGTGACACGAACTCACAACGATTCATCAGAGTAGCGCTAGGGACACCTCG
CCGTTAGCATTGTATTACAGGCTGAGTGAACACACATAATAAGTGTGTCT
CGTCATGAATCTGTACAGGGTGGGCTAAATAAATGTGGTCAGACAAAAAT
GTGTGGTACTTGCAGAAACTACTTGCAGAAATTCCAAAACTTTGATAGCT
TCTCCTTGTCTTTATACGACATTACGGCATATCCCTGAAGACAATCTATC
AATTTGCTGGAAATACATTCCTCAACCGAATTtctttgttggacctaccc
cggtggggcggaggtcctataaatcaACCTTTGTCCGTTGGTTCgtccgt
ttgttcgttcgttattagctttcctcgtgattggctcattagtttttagc
tttcctcgtgattggctcattagttttttctgattttttgcacaaagatg
tgtaactataaaccctcgaatgtgacagagcccgattttcggagaAAAAA
agttgggggcaaatttgggccaaaaaacggctaaaaaacgggttttttgg
actttgtgaaaagttggatcattaactttttctgattttttgcatgaaag
tagggtaccatcataggtaaaagatggctaaagcaaattttttccaaaaa
ttttgttggttcaaaaaacgcatgtttatctataagaatcgctattaata
agcatacatcaatgttcttagccaaattactcaattttttgatgagatag
atgttttttttgctcaaaaagtcttgaatatgaaagaacatttcaagagc
atgaaatattggtttctaaatgtttttttataagaaacaaacgactaatt
ttaatagatcgtcactatttgtgttctgaatgattgtttaattgTCACGC
Tctcgtagatatcaattatatgtgttaaatgcataaccaggtcggtccat
aaaagtatcacttgttgttgCTGATAACCAATAACGACATCTTACTCGTA
GCCATGGCGGTTCTACATCCCATGAATCCCAGCCAATCACTTAGGATATC
AGGATTAGGAGCTCTTTCACGATTTGAAGTATCGTTGTGCTAATCCGCTc
cactttgaatttttattgaaacTGTTTTGGCTTTGTAATATAATCAACTC
TGTTAAAATTGGATGaagtctttttcaaaaaaagtagaaaactaAAGACA
AAGTGTTACACCACCTTCCTTTCTACTGAAAATTTGCTGACTCGCTGGCG
AATctcttataacaaaaaatatttcagggaGATGCCTAGTCTTTTTTCTG
TATTTTAATGATCGTCAGTTTTCTATGAATTGTTAATAGTACACCTGTAG
TGATTTATTGCTTGGAGACATAGGGATCAAATGTTAATATTCGTTACATT
TCGTATCGTAGGGATCAATGTTACTGATTGTATTGACTGAAATGGATACA
ACTTGAATCTTGCTGGAGAAGAATATAAATTTTCCGATTATGCACCTGGG
AAATGTGCAAGGCGTCCCATTGACCATAGTGAATGGCAATAGCAGCTGAA
ATGAAGATTTCGTGTTGATATACTTTGTAAGTTTTTCAATATGAAGATTT
TGTAAGACTGCTTGAAACGCAAAGTTCAAGTGAACCTCTTTTTGCACATG
GTTTTTGTACCGCCCATGTTTTTTGAATCGCCCTagtattttttgcttaa
aactcCCTTTTATATACTATACCTTTTAGAGTAGATGAAACTTTCTAAAC
TCTTTGGACTAGCTGTTTCGAATTTGTTACAAAATCATAAGTTAGTATGC
TTTGAACCCTCCCTTGTACTACAAAACTCAAAAGATCCTATTAAGATCAG
GCTTAATGTTTCCTTATTTGGTTTCATAGGGAGCAATTTCATCCATTAAT
CACGGAAGAGTTATATGGGCTGGTGAAAAGAAGAGGCGACTTAGTCGTTT
TTTTGGTAAGCTTAATTTAGAGGTTAATTAACTTTCTTATACGATAAAGG
GTTAACATAACCCTAACCTTCCCTATAAAAGATACTTCTTAAATTATTCA
TTTTAATCGTAATCACAGGATCCTAGGCTAGCTTTGTTGTCCTTGATACA
TCCTTTAATGCTTGCAATGCGCAATTTTGAAGGATTAAACTTTCTCTGTA
CCCGAGTAAGAAAGTATTGTACTTTGGTCATGAGAACCTTTGGATGAATC
TGTTTTCTTTCGCTAATATTGTAGGGATCGATGTTATTTAAAGAATTGGC
TTGCTTTATCGTTGTTAGTCATTTTAGTCGACTAGCTTACAATCAAATGT
GGTGTCAACTGAAAAAAGCATTTATATGGACTCAAAAGGTATTCGATTGA
GTTGGAAGAGCAATTTGTAAAGCTGCTGAGTTAGAAACTGACCAAACCAA
TGTATTTTTGTAAGTTTCAAAACCTTATTGATTAATTCAATGTTTGAAGT
ATACAATTTAGTTGAGCAATCTAACTGTCTTTGTATGATTTGGTTGTGAC
ATTATATTTCTCTTGTAGATACGACAGTGGCGTTTGCCTAAATTTAACCT
TAATACCTTTTATACTTCATAATATCAAAACCACTGAACCATTTTGAAAC
CCgaatttcatgtttttctttgttttatagAAAAATGACCGATGGTTTTG
ATGACTGAAGTATTCAATGAAAATGGTGAAGGCTGGTGAAAGCTGAAGAA
GTCTTTGGTAAGTTTCAACTAATCGAACTTATCGAACAGTTAAGCGTCAA
GTATATCATCAGTGTATAAGAATAGAAAATATCTTGCTCCTTTTACGAAT
TCGAGATCGACATAACGCGCCTTAATAAAAGACCAAAATAATAAATACTT
CGATTTCAAAATAATCATTGGCATATCCCAAGTAACGGGACAACAACTCA
TCTCGCGGAAGATGTCCGTTTTTTCACAGAcctaaaaaactcatttttag
tacgaaattttcgcgggaacaaaatttcgcggttttcgcggattttgcct
aaaaccgcgaaattaagttcccgcgaaattttacaaaatcgtcaatccgc
gaaattaaattcccgcaaaatttaatttaattcacgcattccctcaaatt
cgtactatttcaagccttataacaggttttttgcttatttaataacgttt
ttggtcaaaaatatcATGCAACCGCGAAATTGaattcccgcgaatttttc
gaaaattgatgaaccgcgaaattaaattcccgcgaaaaaaaataatttga
ccaacCACGAAAATAAATTACCGcggaaatttcttcccttaaggtaacta
TTTCGTAGAAAGTGGCCAACGCCTTCTTAGTTCGGAAAATTTGCGACGTC
ACATGATATTTTGGATAATTGACGTCAGAATTATTTTCGTTAAAACGTCA
CATTCAACGAAGCACTTCTTTCGAGCGTTAGCTAACCTACTATAAGTCTG
ATGCTCCACCTCTCATACTATGAACTGGATTTGAACAAAAATTTCGTTTG
CTCTGACAAGATCTGTTTTCGCATGTATTCGCGGTACGCGAACTCAAAAA
CCAAACCTTAagtttgatgaaattgattttataaatagcaatattttgaa
atcttagcttttcataaattttagtGTTTCTCATAGTTTATGCGTAATTT
TTTCACCGTCATTTCCAGAATCAACCCTCTGACAAACCATTAGAAATCGC
AGCCGGCTTACTAGTAGAGGCCACAATGTCTTACCGTGTGCAGGAGcctg
tgcaaagggattttatgatcgatttttgttccttgaatgtagaagatcaa
aatttgaaaggtGAGATCGGGTGTGACCACCCGTTGCCATGAAAACTTAC
CCAATTGGTTAccatggcaaccaaaataaaaagtcgtcaaaattgaaaaa
tctttcttccattcgaaagagcatgaaaactGATAAGGTCACAAcatata
taccgggtgacccacgaaaaagtagaagagtttggagggtaactgtgtcc
gaaaaaatttgaattttaactaaattcttttttcatggtaaagaggaaag
gcaaacttaaattttgatgtatcatttttttaattttggaaaagtagtta
tcaagatatggaggtataaagtcaaaagtcattataaaaaacagtcaaaa
aacgtcaaaaagactGTATCAAATTTGTATCAGAACAAACAACTTATCTC
CTGgcatattcattttcagatataggctCTGACCTTTTTGTTTTGGTTGC
CATGGTAACCAATGGCGTCAGTTTCCATGACAACGTTTGGTCACACCACA
TCAATTTCAacttttgatcttctacattcaaggaactaTTCATAAAATTC
CTTTgtacaagctgctgcacacgggaagctttttcgcgacatagtgTCCT
CTACTATACCATTTTAGCGTGACAGACACAAAATATGGAATTCTTTTAGT
ATAGTATAAGATCATTCCAAAAGCACTGAACCATTTTGAAACCCGAAATT
CAtgtttctctttcttttttatagaaaaatgacCGATGGTATGATGACTG
AAGTATTCAATGAAAATAGTGAAGGCTGGCGAAAGCTGAAGAAGTCTTTG
GTAAGTTTCAAACCATGTTATAGATTAAATGTGCTCTAATGTTGGTGCCC
CTGAACTAGTTTTCATAGAAAGTGACACGCCTTCttacaaattcaaaaat
tagcGACATTACATGATCTTTTAAATAATTGAGGTTAGAATTATTCTCGT
TACAAAGTCACTTTCAAGAAGTCTTTGGTAAGTCTCAAACCCTGTTAATT
CATTGTAATTTTCCAATACTTTCTGATTTTCTAAGGAGGCAACTAGTTTT
TGGGCTTTGATTGAGAAAATTGAATTAGAAAAATTGAATCCTCCCACTAA
TTGTTGTTTTCGTATTCTAGGAATCGATTGCGAAAGAATTGACGCTGATG
TGCTGTTATTGGTATCATAATGACCGAAACTTCACACGTCTTTGTTGACA
AACAACCAAACATTTGTTGACAAGTAACTTAtcacaacaaaataaaattg
gACCTTGCCTTTTCGCATTCTGAAGATTGGTAGTGCCAAATCTGAACTGA
AAGGCTAATTTCGTTACCCATGTGACAGTTATCTATGGAAGGTTGCCGAT
GTGATATAGAGAGTGTAagttatgaattttttgtgttcATTTTAAACTGA
AGTATGTGATTTAGGGGTCGGTTACACGTACCTGAAATGAAACTTAGACc
gaaatgaaattttgtctgatttttttattttgcgttatatgtttttattt
caattgGAGATTTCATTTTCGGGTAGGCGAAATAATGAAACTCAAAGTGT
AACTGACCCCTTAAACCATCCGCCATCGAACGTGCCTTTCCTACAGCGTG
GTTTACGTTGAGGCGTAATGATAATTGATAAATACTTTCTATTTTGATTG
AGTATCCTTTTGCACTCTATATACGCCCATCTTTTGAATAAACGTTATGT
TTTTCGTATTGTAGGTGTATATGATGTGTATTACCACCGATGTGAAATTG
GTTTAACAAGCTGAATGAATTGGACTCGTTGAATATTGCTCAGTATTGCA
GTTCCTTGGGCAGATGTCATGAACACGGTATCGATATGGAGCTATTGGTC
GCGTAATATTTAAATTTATCCTTGTTTCTCTACTTTAGGAACTACACTTC
TTTCTTGTATCCGCAAGCCAGGTTTTCTACTTATCTTTGGGTTAGAGGTT
TCTTAGAGGCGTTTAGTCTGAAACGAAGCTACTTTTTAGGCAGATTTTCG
CATTTTACGAGTCGTAATGAGTCTTTTCAATGAGCTATCCCAGAAATAAC
TTTGTATTAAAGTGATGGGATCAAGTGATTGGATTCTTATTGACTTTTGG
ACAccactgaattttttattgtttggacTCATTTTTATTGCCCCGATCGT
AGATTCTTTTTTATTCTGAAAGCTGTGGACCCGCTGGATGTCACACCACG
ACACACTGGTTTATCTGGGATAGCTCAATAATGGTATTCAGCATTTCTTT
TGACATTTTAGAGAAATTTCTTGAGGTATCGTAATGAGTTCTACTTAAGA
GCGACACTTTAAATTATATTTACTACGAATTTTTACATCAATCTCTGCTA
GCAAGTTCTAATGACTAATTTTCAAAGTTATCAGATTCGAAACTTCTTTA
CTGGATTTAGGGAAAGGAAAACgagaaaactttcaaaagttttaaaattg
atcCACCATTATTTGGCCTGATTATATCATGCTAGATTGAGTTAATCAAG
TTCGGCATTTCTTTCAtctccaaaatcaaaacaatttcgTGATGCAAACA
TACGAAATTCTATGACAGTCAAGTGTCAGCTGGGTGGTATTTTACAATCT
TTGGATAGACGTGTTTAGGTTTTCGGccaattgataaaaaaactatGCTT
CAGAGTTCAagctttcttagagaaagctctttctttgattttatcaaGGC
GATTCAATATTGGAGGGTGTGTTTGACTACGACCAATGACACATAAGCTA
ACTCTCGATATTTAGAAATCTAGGACCTAGGTACAGCAGAGGGTGTCTCA
GGGCGGGTTCTTTGACCCAACGGATCTTGAGCAGAAATAAGGATAGAAAT
CCGAGACACGAGTTTGACTGAATGTTGAATGTTTTATTTCTACAATTGTT
CGTTTCCGGTTGTATGTCTTAACCATGATTTAacaacatatttatttttg
ttttcaaatttatatttttcgaTTCGTATTTCTAGAAGTATGTTCTTTTC
CGATTCTAGCAAAAGCTGCGATAGGCCGTGCATGATAGCCTCCGAATCTT
GACCAAGGCTTACTTTCATAATCTCAATCAATCGATAAATcgtacaaact
tttgtgaaCAGAATCTTGCCTTATTCCCGCTagtaaatatctttaaaatt
cttaaaaaaggCGAATGTTTATGCAcgcgaaaaattgaaaatctaaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003182XLOC_003182Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005604-exon-sc0000054-1491911889:753464..753689TCONS_00005604-exon-sc0000054-1491911889:753464..753689Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:753464..753689TCONS_00005604-exon-sc0000054-1510915933:753464..753689Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:753464..753689TCONS_00005604-exon-sc0000054-1575043694:753464..753689Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:762375..762539TCONS_00005604-exon-sc0000054-1491911889:762375..762539Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:762375..762539TCONS_00005604-exon-sc0000054-1510915933:762375..762539Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:762375..762539TCONS_00005604-exon-sc0000054-1575043694:762375..762539Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:762843..762918TCONS_00005604-exon-sc0000054-1491911889:762843..762918Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:762843..762918TCONS_00005604-exon-sc0000054-1510915933:762843..762918Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:762843..762918TCONS_00005604-exon-sc0000054-1575043694:762843..762918Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:763188..763372TCONS_00005604-exon-sc0000054-1491911889:763188..763372Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:763188..763372TCONS_00005604-exon-sc0000054-1510915933:763188..763372Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:763188..763372TCONS_00005604-exon-sc0000054-1575043694:763188..763372Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:763594..763670TCONS_00005604-exon-sc0000054-1491911889:763594..763670Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:763594..763670TCONS_00005604-exon-sc0000054-1510915933:763594..763670Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:763594..763670TCONS_00005604-exon-sc0000054-1575043694:763594..763670Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:765488..765563TCONS_00005604-exon-sc0000054-1491911889:765488..765563Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:765488..765563TCONS_00005604-exon-sc0000054-1510915933:765488..765563Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:765488..765563TCONS_00005604-exon-sc0000054-1575043694:765488..765563Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:765884..766127TCONS_00005604-exon-sc0000054-1491911889:765884..766127Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:765884..766127TCONS_00005604-exon-sc0000054-1510915933:765884..766127Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:765884..766127TCONS_00005604-exon-sc0000054-1575043694:765884..766127Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1491911889:766478..767963TCONS_00005604-exon-sc0000054-1491911889:766478..767963Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1510915933:766478..767963TCONS_00005604-exon-sc0000054-1510915933:766478..767963Clytia hemisphaericaexon
TCONS_00005604-exon-sc0000054-1575043694:766478..767963TCONS_00005604-exon-sc0000054-1575043694:766478..767963Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:753464..767963 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0511073	0.100698	0.0820727	0.20733	2.11513	2.14552	1.0029	0.635614	0.569471	0.25581	0.243252	0.512373	0.378479	0.481035	0.202255	0.176575	0.124533	0.0888707	0.34586	0.374049	0.110796	0.136498	0.16928	0.0969424	0.838388	1.25105	0.244167	0.220676	0.0879323	0.0712725
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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