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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005553 ID=TCONS_00005553|Name=TCONS_00005553|organism=Clytia hemisphaerica|type=transcript|length=2202bp
tgggATCTTATGTTCGTTTCATTTTGCAAGGAAATTGTGTCCGGCTATCT
TATGATGCGATTTTTGAGAGTTGTCCAGGAAATTGATGATGAACTTACTG
AACAAgtacaaaaagaagaaagtaacACAGATACAAACGAGAAGTCATCG
AGTCAACACACACCAACACGAAGTCGAAGTACCCGGGGCAATACTTTCTT
AACAGCCATGGGTTTACAAACTAGATCATCGTCACTGACTCAACACCATC
ACAAAAACATGGAACATCTGATGGCAGTCAGAGCGAAATGTGTTGAAGAG
CTGGTCAATACAGAGAAAGATTATGTACAAATGCTACGCAATATCATAGA
GGGATATTTAGAGAAAGTGCGTCAAGAGAAGAGCCTTTTCACTGCAGCTG
ATGCAGAGACCATCTTCGGCAACATCGAAGAACTTTATCACTTCCATAAA
GAATTCTTGAAAGAacttcaacaagccatcaaatTCGATCGAATGGAGGA
ATCCATTGTCGGGCATCTTTTCATAAAACACAAAAACAGATTCGAGATCT
ACTCAAAATACTGCAACAATCAGCCTCGTTCCAGTGCTAGAATCTCACGG
TTgatcaaagaaaagaaatacgAATTATTTTTCGAAacGTGCCGTTTACG
TCAAAACATGATACGGCTTTCGTTGGACGGATTTCTTCTTTCACCCGTCC
AAAGAATTTGTAAATATCCACTACAATTAAAAGAATTATTGAAACATACA
CATTCTGAACACGAAGATTATAATACGCTCAACGAAGCGAAAACATGCAT
GCAAAACGTTGCTGCTGTCATAAACGAGCGAAAAAGACGCTTAGAAAATG
TAAATAAACTTGCACGGTGGCAATTGACTGTCTCTAATTGGAAAGATGAA
GACGTGGTGATGAAAAGTAGTGATTTATTGTTTAAAGGACCTTTACTGAA
GATTAATAACGGTCGAGAATGCGAACGTTTTGTGTATTTATTTGACCATC
AGTTGTTATATTTCGTCAAAGAGGAAAACAGACGACAGCCATTATGTTAC
CGAGGACGCGTTGACTTGGATACGGCGATAATAGAGAACTTGGGAGATAA
CCATGTTTTTATACGAGGTGATACTGTGTCAAATGTGTGGCGGATATGGA
ACACGAGTAAAACGAAATGGTGTTATTTCCGCGCGGACACAGCGGAGAAG
AAAGAGAATTGGTTGAAAGCgcttgaaaacgaaagagaACATGTTAAAGA
AGAACAAAAGCAAGGTTTTACAGTACTACCAGAAGTTCGAAGTGCGGCCA
TGGAAAGCGCTTACACAAAACATATAGCAGGTGTGAAACGTGGTCGGATG
AGACGTAAATCCATTTGTACAAATCATCCGGAGCTGGAAACAACGTACGC
TTCCGGACCGTTAGCTGGCCCCATTAACCGGACTTTTTCTTCGACTCTCG
CTACATCCTCCTCCTCATCATCCACGAGGTCTTCCAATAACTCAAAATCA
TCCCTTTCAACGTCACCTTCAAGTCCAACgaacaataataataacaataa
tatgaCGTCATCGTACTCAATACAAAGCGAAGACGGGCCAACCGTTCGGA
AAAGGGTCCATAAACCGAAACGTAAAAACTCTTTTCGATGGTCATTAAAT
AGtactatatttgaaaaatacttttgattttttcatatacattttcttca
tcttttatATGAAAATGACCTCTCTCGTGACCTTTTGTCTCATTTTTCTT
TGAAGTCGTTTTTatgtattcaatttcatttgtttcgttttttgtcattt
tttgataataatttttttgcgaatattttctttttacacCTTCGTCACTT
TTGTCTGCATCCACCTACGTATAACTGGGAAGATATTCTCGAATATTTTA
CAAGGGACCGAGTTCAAACTTAGGTTTAGTTTTTACTCACGATTATCAAA
CTTTGAGGTTTCTTTGAacttaaaatatatttcttacactcttttttatg
aTTATTTTATAGTTTCCATGTTTTCTGTCCAATTTTTATGTGACcaattt
tgtataaaattttACCTAAATTTAATGATTGCCCCTGTTTATACTATTTT
ATGCCAAACTGAATATAgagataaatttattttttatatgaatAAAAGAC
AGAAATTCTTTAGTATAAAATGATTACAAAGTTTCCTTATCCATTTTCct
ag Run BLAST on NCBI transcript from alignment at sc0000054:149509..156821+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005553 ID=TCONS_00005553|Name=TCONS_00005553|organism=Clytia hemisphaerica|type=transcript|length=7313bp|location=Sequence derived from alignment at sc0000054:149509..156821+ (Clytia hemisphaerica)
tgggATCTTATGTTCGTTTCATTTTGCAAGGAAATTGTGTCCGGCTATCT
TATGATGCGATTTGTAAGTTTTTTGTACATctctaataattttttttaca
tgtCACATTTGAGCTATGATTAGCAATTTTCAATTGACAGCCGTCTTAGA
CTTCTAGATAAGGAgttcttttcgatttttttcgtgGTTATTGATTGTGT
ATTGTCTGTATCCACTTGTCATCAATGATGTCATTGTGTTTGGTCGACCT
TGTCTacccttaagggaacttattttggcgggaactaattttggcggatt
tggcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNcccgccaaaattaaaaatttcgttgactcgccaaaattag
ttcccgccaaaataagttcccttaaggtagtagaTCGAGGTGGCAAATCT
AATAGCTCGGTTGTTGAACTGAAAGACCTTTTGTTCTTTCTACTattctt
caagaaaaaaatatctgCCTTATTAACTGTTATTACTGTATTGTGACAAA
GTCACTCTGATTTTTCGTTTGAAATGCAAAGTTGACCTACCATACGTTTA
CACCACAACAGGAATTTCTTGGCATTCTTGATAAAGACATACAGTTAATT
GGTTCTGAATGTTCATCCAATTATTTTTTTAGACATGCTCTTGACTTCTC
AAGTCGCCTTTCCATAATCAACGGAGTCTTTTTGCGCTATTTAAGTATTT
CATAATGATGTTACCTTGCTGGTTCTGATTGGGATGTTGAAAAAATACAA
GATGAATGTCACTAGCTATCATCCACTGAGGGTCTATTGAGTTATATAAT
GTTGATGTAACTTTTGATGTCATTTTTGTATCCCTTCTATATATCTTTCG
ATCCCTATAAAACTGATAATATAATGAATGTGAGAGAATCTAGAACAGAA
AAAGTAAAATGTGGCTTTTCAAAGTGGTTAGCTatctttcaattttgttt
tttcaatgcTGCAATTGAGAAATGAATCTTTAACTGTCCCAACACCATTG
GCTGATTTTGCTGCTGTTTAGTGCTTGAaattttaacatgttctttagtt
ttaaaacaaagaagaaaagttATTGGTTACTCAAATTATCTTATTTTGGG
TTGTTATTGAGgcgaatatttcaaaagcgAGTAAGTTGAAGCGACCATCT
TTATTGTCAAGCCAAGTACTCGTTTTTTCCGTAACATCGGTGACCAAAAA
CTCATAGCAAATAGTTCTTCTTAGCTTCTTACTAAATTTTTCCATCAAAA
GAAAGGCAGGTTTGTAGGCCAGGTTTCAAGCAGCTTAAATTTTTCTCTCT
TGCAAAGGCCATATTTCTAAGCGCTTGGAGGGGCTGATTTGTCAAAACAA
GGCCTTCTTTTCATCGAAATCACTTAATCTTGACAATAAATCCTTCAAAA
TCTCAGGCTACTGATGTCATTAAGTCCCGAAAGAACTGAAAGAAAACATG
GttttattctttttcaaaaaaaaagagaaggtGTTGCGAAATCACTTGGT
GatatttttcatccaaatttgaAACATTTCCGTTGTTGGTGGGCAGAGGA
CGTTTTatgagaaaactttttgaactgTTGAAGTTGACTTGGTTATAACC
CGAGTGACGTTTCTATCTCATTCATCTGTGTTATTGTAGGAGAAAGTAGT
TGGTTGTTGTTTTACATATTCTGAAAATCTTTCTTCTTTGATATGGTTTG
TTGGGATGGTGAAATGTTGCATGTGATTGAGGTACTACAGTTGAAGTCTT
CTATTCGAGCCGTTTTCCTTTTAGAAACAGAGAAAGGGATTTTATCTCAA
CCGTCTTTCCAAGTAAATGCTTGACTATCATTATTTCGTTGTGTCATTCA
GAATTTTGATTTGGTAGGAAAAGTGTCAAACACGTATAACTAATTGTCAT
GTACCATTTGAAATGCCATAGATGAAAGTGTATAATTTTAGCATTGACGT
GTTTTTTACTTAATgggaaacaatttttgaaactcCATCCATCGGCAATA
CTATCTCCTTTTAtagaatgttttaattttcaagcttAACAGAATTTCCC
ATGCGTCTACGAAGGATATCAGTTTTTACGTCACAGCACTTTGATGGAAA
TTGTTTATAAAGATGCGTATTTTATCCTTTCTCATTTCCAGTTGAGAGTT
GTCCAGGAAATTGATGATGAACTTACTGAACAAgtacaaaaagaagaaag
taacACAGATACAAACGAGAAGTCATCGAGTCAACACACACCAACACGAA
GTCGAAGTACCCGGGGCAATACTTTCTTAACAGCCATGGGTTTACAAACT
AGATCATCGTCACTGACTCAACACCATCACAAAAACATGGAACATCTGAT
GGCAGTCAGAGCGAAATGTGTTGAAGAGCTGGTCAATACAGAGAAAGATT
ATGTACAAATGCTACGCAATATCATAGAGGTACGTTTTGTAAATGACTTC
TAGTTACCTAAAATTCAGACACTTGCTAATAATGTGGCTATGGCTATATA
TTAAAGTTATCTAATTTGCACGATTGAGTACATCTGACATCTCTATATCA
ATCGCTCTTTTTTACATTGCAGGGATATTTAGAGAAAGTGCGTCAAGAGA
AGAGCCTTTTCACTGCAGCTGATGCAGAGACCATCTTCGGCAACATCGAA
GAACTTTATCACTTCCATAAAGAATTCTTGAAAGAacttcaacaagccat
caaatTCGATCGAATGGAGGAATCCATTGTCGGGCATCTTTTCATAAAAC
ACGTAAGTTGACTTTTGATTAATTAGTTCGTCCTCTCAATCTACTGAGCT
CTGAACTGGGTgtatttcaatttctttcaacTTTAATGGTAAGCAGGGTg
tcactttttcatttttttgacgaAGTGGTACATTAAGGAAAACTCTAATC
CACCCGTGACCCCGTTATTATTTCTGGTGCTTGAGTTTAGTAGTCAAGTT
CTGCTCCGTCAATCTTTTGACTACGAATTTGTTATGGGAGATTCTTGTGA
GAAACATTATATAACAAGGAGACCTCCAAAACATATGTCCTTGGATTATA
GCTTCTCAATTTCACAGATTATAAGTTTTCGCACGACTTTAGNTATGTCC
TTGGAttatagcttctcaaattcacagATTATAAGTTTTCGCACGGCTTT
AAATAGAACTGACCCAGTGATGTGACTTTTATTTATTGTTTTGGTTATAG
AAAAACAGATTCGAGATCTACTCAAAATACTGCAACAATCAGCCTCGTTC
CAGTGCTAGAATCTCACGGTTgatcaaagaaaagaaatacgAATTATTTT
TCGAAGTAAGTAATAGACCCTCTAGGTGTTATTATCGGATTCTGTTTGAA
TATTTGGGGAATTTCTTGAATCTCAAACATTTAGAAACCCGTCAATCTCA
ACTAATGTCCCTGAGGCGCCATAGGATTGATGAAGATTTGATAGGATCAC
TTCATTGAGActcctttcttgttttttctgcGGATTTATAAGATTTAAAA
CCTTCGATTCTCATGTGCTCGAGTTATGTGCCTTAGGCAGATTCATCCAT
TAAAGAATTTATACCGCTATTTTCTTGTTAATCGACCATTTAGCGGTGGA
ATtctgatcgaaaaaaaaatctgacaaaACTCTTCACAAATATGGTTGAT
AAGATGATCGATAGATGGTCACATTTTTCTCACTGTTCGACAAATTCTTT
TTCATAATCCAAATATAAGACCGTTGacttaaaattcttttttaccTTGC
AACTATTTTAAGaagatttatctttttaaagctacttttaaAACCTGCGA
AATTTTTATTCAGGTCAAACAGCATTTTTGATATTGTTTCATCTGCAGTA
GAGGATTTACACTTGGGTGTTTATGAGAAATTCGTGATCGACGCATAcga
ttaaaagtttttttcattcgTTTTCGAGGCCTCTAACTGCTTATTTCCCG
GATATTTTCTATTATTTCGAACCGTTTTAACACCTAACGGTCCCGGATGA
CGAATGCTCCcgtttgaaaaaactcaaacgTCCTCATTTAAACCACTTAT
AAAGGTGTCTCAAAGTACCACAAAACTTCCTTTAATGATGAAATAGCGCG
TCATATTTATAAAtactttttatttcttttctttttatagacGTGCCGTT
TACGTCAAAACATGATACGGCTTTCGTTGGACGGATTTCTTCTTTCACCC
GTCCAAAGAATTTGTAAATATCCACTACAATTAAAAGTAAGTATCCGGAT
GCTTtgtctatctatatatttcatactaAAAGGTCCTGGGAGCCATTATC
CGTACATTATTACAAAACAATTGATGTAAGGTATTCGCTTACGCTACTCA
AGTCATTTGTAGAGATTGTTGTCTCAAAATCCTTGTTTACCTTCTACCAA
TTTTACCCATGATTCATAGCGGTCTAAAAAGATAGGGTTTTGAATATTAG
AAGGTTGGTTGCTGACGAGTATTTTGTAAAAGGAAACTGTACCTGTATGC
TGGATATCATTTTATTTACTTATTCCTTTTCCAGGAATTATTGAAACATA
CACATTCTGAACACGAAGATTATAATACGCTCAACGAAGCGAAAACATGC
ATGCAAAACGTTGCTGCTGTCATAAACGAGCGAAAAAGACGCTTAGAAAA
TGTAAATAAACTTGCACGGTGGCAATTGACTGTCTCTAATTGGAAAGATG
AAGACGTGGTGATGAAAAGTAGTGATTTATTGTTTAAAGGACCTTTACTG
AAGATTAATAACGGTCGAGAATGCGAACGTTTTGTGTATTTATTTGACCA
TCAGTTGTTATATTTCGTCAAAGAGGAAAACAGACGACAGCCATTATGTT
ACCGAGGACGCGTTGACTTGGATACGGCGATAATAGAGAACTTGGGAGAT
AACCATGTTTTTATACGAGGTGATACTGTGTCAAATGTGTGGCGGATATG
GAACACGAGTAAAACGAAATGGTGTTATTTCCGCGCGGACACAGCGGAGA
AGAAAGAGAATTGGTTGAAAGCgcttgaaaacgaaagagaACATGTTAAA
GAAGAACAAAAGCAAGGTAcctatcaagtaccatttttaaattttttaaa
tacctTAATGCTTAATGTTCTTGTCATTTGAAAGACTACACCTAATTTCA
TAGGGGGTAGTCTCAAGCCAGCCCCTCATTTTCCCCTGTATATAATTCAT
AAGTGCAGTCAAGGCGACCATCGAGCACTTCGtatattttgatcatttta
agTAGAGCATGATTTGGAATACTCATTATTTATATTCTCATTTCCCGTTC
AGGTTTTACAGTACTACCAGAAGTTCGAAGTGCGGCCATGGAAAGCGCTT
ACACAAAACATATAGCAGGTAAGATTCCCTTTTTAATGGATCAAGGCATC
ATCAACTTTATAAAGGTCCTATCTGAATGTGGATTCTCTTATTGAGGGCG
TAAGGgtaaatcgttcaaataatctCGCACcctttttaaattaaataaat
caGAACATGAAAATTCAATTTATCTTTCCTCCATTTTTCAGGTGTGAAAC
GTGGTCGGATGAGACGTAAATCCATTTGTACAAATCATCCGGAGCTGGAA
ACAACGTACGCTTCCGGACCGTTAGCTGGCCCCATTAACCGGACTTTTTC
TTCGACTCTCGCTACATCCTCCTCCTCATCATCCACGAGGTCTTCCAATA
ACTCAAAATCATCCCTTTCAACGTCACCTTCAAGTCCAACgaacaataat
aataacaataatatgaCGTCATCGTACTCAATACAAAGCGAAGACGGGCC
AACCGTTCGGAAAAGGGTCCATAAACCGAAACGTAAAAACTCTTTTCGAT
GGTCATTAAATAGtactatatttgaaaaatacttttgattttttcatata
cattttcttcatcttttatATGAAAATGACCTCTCTCGTGACCTTTTGTC
TCATTTTTCTTTGAAGTCGTTTTTatgtattcaatttcatttgtttcgtt
ttttgtcattttttgataataatttttttgcgaatattttctttttacac
CTTCGTCACTTTTGTCTGCATCCACCTACGTATAACTGGGAAGATATTCT
CGAATATTTTACAAGGGACCGAGTTCAAACTTAGGTTTAGTTTTTACTCA
CGATTATCAAACTTTGAGGTTTCTTTGAacttaaaatatatttcttacac
tcttttttatgaTTATTTTATAGTTTCCATGTTTTCTGTCCAATTTTTAT
GTGACcaattttgtataaaattttACCTAAATTTAATGATTGCCCCTGTT
TATACTATTTTATGCCAAACTGAATATAgagataaatttattttttatat
gaatAAAAGACAGAAATTCTTTAGTATAAAATGATTACAAAGTTTCCTTA
TCCATTTTCctag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005553-exon-sc0000054-1491911889:149509..149571 | TCONS_00005553-exon-sc0000054-1491911889:149509..149571 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:149509..149571 | TCONS_00005553-exon-sc0000054-1510915933:149509..149571 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:149509..149571 | TCONS_00005553-exon-sc0000054-1575043694:149509..149571 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:152550..152837 | TCONS_00005553-exon-sc0000054-1491911889:152550..152837 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:152550..152837 | TCONS_00005553-exon-sc0000054-1510915933:152550..152837 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:152550..152837 | TCONS_00005553-exon-sc0000054-1575043694:152550..152837 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:152981..153160 | TCONS_00005553-exon-sc0000054-1491911889:152981..153160 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:152981..153160 | TCONS_00005553-exon-sc0000054-1510915933:152981..153160 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:152981..153160 | TCONS_00005553-exon-sc0000054-1575043694:152981..153160 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:153609..153713 | TCONS_00005553-exon-sc0000054-1491911889:153609..153713 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:153609..153713 | TCONS_00005553-exon-sc0000054-1510915933:153609..153713 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:153609..153713 | TCONS_00005553-exon-sc0000054-1575043694:153609..153713 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:154549..154644 | TCONS_00005553-exon-sc0000054-1491911889:154549..154644 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:154549..154644 | TCONS_00005553-exon-sc0000054-1510915933:154549..154644 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:154549..154644 | TCONS_00005553-exon-sc0000054-1575043694:154549..154644 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:154943..155474 | TCONS_00005553-exon-sc0000054-1491911889:154943..155474 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:154943..155474 | TCONS_00005553-exon-sc0000054-1510915933:154943..155474 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:154943..155474 | TCONS_00005553-exon-sc0000054-1575043694:154943..155474 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:155711..155776 | TCONS_00005553-exon-sc0000054-1491911889:155711..155776 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:155711..155776 | TCONS_00005553-exon-sc0000054-1510915933:155711..155776 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:155711..155776 | TCONS_00005553-exon-sc0000054-1575043694:155711..155776 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1491911889:155950..156821 | TCONS_00005553-exon-sc0000054-1491911889:155950..156821 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1510915933:155950..156821 | TCONS_00005553-exon-sc0000054-1510915933:155950..156821 | Clytia hemisphaerica | exon |
| TCONS_00005553-exon-sc0000054-1575043694:155950..156821 | TCONS_00005553-exon-sc0000054-1575043694:155950..156821 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:149509..156821 + |
Blast
BLAST of TCONS_00005553 vs. Swiss-Prot (Human)
Match: ARHG4 (Rho guanine nucleotide exchange factor 4 OS=Homo sapiens GN=ARHGEF4 PE=1 SV=3) HSP 1 Score: 303.523 bits (776), Expect = 2.259e-91 Identity = 153/392 (39.03%), Postives = 239/392 (60.97%), Query Frame = 1
Query: 277 VRAKCVEELVNTEKDYVQMLRNIIEGYLEKVRQEKSLFTAADAETIFGNIEELYHFHKEFLKELQQAIKFDRMEESIVGHLFIKHKNRFEIYSKYCNNQPRSSARISRLIKEKKYELFFETCRLRQNMIRLSLDGFLLSPVQRICKYPLQLKELLKHTHSEHEDYNTLNEAKTCMQNVAAVINERKRRLENVNKLARWQLTVSNWKDEDVVMKSSDLLFKGPLLKIN--NGRECERFVYLFDHQLLYFVKEENRRQPLCYRGRVDLDTAIIENLGDNHVFIRGDTVSNVWRIWNTSKTKWCYFRADTAEKKENWLKALENEREHVKEEQKQGFTVLPEVRSAAMESAYTKHIAGVKRG--------RMRRKSICTNHPELETTYASGPLAGP 1422
+R + E+++TE+DY++ LR+I EGY+ + R+ +F+ TIFGNIE++Y K F+K L+Q +R S +G F++H+ F+IYS+YCNN P + +SRL K KY FFE CRL Q MI +SLDGFLL+PVQ+ICKYPLQL ELLK+TH +H D+ + A M+NVA +INERKRRLEN++K+A+WQ ++ +W+ ED++++SS+L++ G L ++ + +R +LFDHQL+Y K+ RR L Y+GR+D+D + +L D ++ N +R+ + E+K+ WLKA ERE V+ +Q+ GF++ R AM +A + + G + R + ++ +N P+ + + P P
Sbjct: 284 MRTNVINEILSTERDYIKHLRDICEGYVRQCRKRADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFNRERPHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQLDQETGFSITELQRKQAMLNASKQQVTGKPKAVGRPCYLTRQKHPALPSNRPQQQVLVLAEPRRKP 675
The following BLAST results are available for this feature:
|
