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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005407 ID=TCONS_00005407|Name=TCONS_00005407|organism=Clytia hemisphaerica|type=transcript|length=392bp AGAAAGCTGGTTGTTCGTATTGTACGTGTAGTTTTTTTACTTGAATCTTT ATAAGTTTGGAGTTTGAGCAGACAATTTcataaatcattaaaaaaattga caatggcGTATGCTGCATAAAAATACCTCGGTggtgaaattaattttgat ttgaagatTTACAGAAgcggtattttttcaataaattcaaaactgaagaa gaaaagtgaaaaggATCGCTCTGGCAAGTGACCTTTTTAGCCTCAAAGAG ATTTTAGAGTAACCGAAGTGGCTGTGGGCTAGATTAGCCTTTGAAAGCAC TATTACATATGGATTCATTAGAAGAGGCTAGAGATGATaaatacaatgaa aaacatATTCAAGATCGAAAGACTTGGTTTATATCAGAGTAA Run BLAST on NCBI transcript from alignment at sc0000053:5688..6671+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005407 ID=TCONS_00005407|Name=TCONS_00005407|organism=Clytia hemisphaerica|type=transcript|length=984bp|location=Sequence derived from alignment at sc0000053:5688..6671+ (Clytia hemisphaerica) AGAAAGCTGGTTGTTCGTATTGTACGTGTAGTTTTTTTACTTGAATCTTT
ATAAGTTTGGAGTTTGAGCAGACAATTTcataaatcattaaaaaaattga
caatggcGTATGCTGCATAAAAATACCTCGGTggtgaaattaattttgat
ttgaagatTTACAGAAgcggtattttttcaataaattcaaaactgaagaa
gaaaagtgaaaagtaagaACATGGAGTATAATGATAGGAAATCCTCTTTC
TCGAACTTGCGAGGGGGAGTATTCGTTCCATATCATGAAAGCCAAAAGGA
GTACTAGTTTGTGAGTGGTGATGGGTGTGTCCGAgctaaaaagcaaaaaa
taagagATAACATGACACGAGataacattttttgatgtttgtgggacctt
tcaaaaaatataccttTCTTCCTTACAGANTTTTTTGATGTTTGTggaac
ctttaaaaaaaaaatactattcttCCTTACAGAACTTTGCTCCAATTTTC
AGGGAAACATGACTTTTGGATCCTTTCAGAGAGTAGATTTGATTTTCGTT
AACCTTTTGAGAAATTCCTAAGGTTTGAGAAAAAGGTACGCATACCACTC
GCACATATCATTTGACGctattgccccatttgcccctctaaaagaaaatc
aatctCTAATACCCAGTAGTAGGAAAGACATTGTGACGGATAGAATTATG
TTGctggaaattttcattcttttatcTTTAGGGATCGCTCTGGATNAAAG
ACATTGTGACGGATAGAATTATGTTGctggaaattttcattcttttattt
ttagggATCGCTCTGGCAAGTGACCTTTTTAGCCTCAAAGAGATTTTAGA
GTAACCGAAGTGGCTGTGGGCTAGATTAGCCTTTGAAAGCACTATTACAT
ATGGATTCATTAGAAGAGGCTAGAGATGATaaatacaatgaaaaacatAT
TCAAGATCGAAAGACTTGGTTTATATCAGAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00005407-exon-sc0000053-1491911889:5688..5899 | TCONS_00005407-exon-sc0000053-1491911889:5688..5899 | Clytia hemisphaerica | exon |
TCONS_00005407-exon-sc0000053-1510915933:5688..5899 | TCONS_00005407-exon-sc0000053-1510915933:5688..5899 | Clytia hemisphaerica | exon |
TCONS_00005407-exon-sc0000053-1575043694:5688..5899 | TCONS_00005407-exon-sc0000053-1575043694:5688..5899 | Clytia hemisphaerica | exon |
TCONS_00005407-exon-sc0000053-1491911889:6492..6671 | TCONS_00005407-exon-sc0000053-1491911889:6492..6671 | Clytia hemisphaerica | exon |
TCONS_00005407-exon-sc0000053-1510915933:6492..6671 | TCONS_00005407-exon-sc0000053-1510915933:6492..6671 | Clytia hemisphaerica | exon |
TCONS_00005407-exon-sc0000053-1575043694:6492..6671 | TCONS_00005407-exon-sc0000053-1575043694:6492..6671 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000053 | supercontig | sc0000053:5688..6671 + |
Blast
The following BLAST results are available for this feature:
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