TCONS_00005371 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005371
Unique NameTCONS_00005371
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4216

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005371 ID=TCONS_00005371|Name=TCONS_00005371|organism=Clytia hemisphaerica|type=transcript|length=4216bp
TGCCAACCGTGGTTTAGGTTTGGAATTTGTGAAGAAGTTGGCGAGCAGAG
TTGATATTTTATTTGCTGGATGTCGTAAACCTTCTGAAGCTTAAgaattG
AATGAGCTTAAAAACTTTCACCACAATGTTCATATATTAGAGCTAGATGT
CACTTGTGAGAAAAGTATCCAAGCTTGCATTGAAGAAGTCTCCAAAGTTT
GCGGTGAAGTCGGATTGAGTTGTTTGATCAACAATGCAGGAGCAATAAAG
AAGCCGGATAACAAAGTTACTGAACTATCATTGGATGATCTCAAACGTAT
TTTTAGTGTTAACACCTTTGGCCCGTCAATAGTTTGTAAGCATGCACTCG
TTATGCTCCAACAGGCAGCTATGAAAACATCTAGTGATTACATCATCTCA
AAGCCACTAATCATAAATATTGGAACCATTTTATCTTCGATTGGGAGTGT
GGAACGATTTGGACTCTCCCATTACAGCTACAAAATGTCAAAGAGTTCAT
TGAatatgtttacaaaaatgttgTCTTTGGAGCTCAAACAGGATGACATC
GGTGTTATTTGCATCAACCCTGGTTGGGTTCAAACAGAGCTTGGAGGTTG
GAATGCCACTTTGACAGTTGAGCAGTCAGTTGATCAGATGTTAAAAACTT
TATCAATTTTGAAGCCTGACCAAATGGGATCACTCATAGATATTGATGGA
AGTATTATTCCTTATTGATATTCCCTTTGGAAAAGCTAATTCATATTCCT
GATATATTGTCAATCAAAATTGTCTTCAATTAACCTGAATCTagcaagaa
ctaattttggcaatcagaaaaaatcctaaaaaagatttttcaaagattca
gCAAGAGACTcattttgctgagtcagcaatttttttagttttaacaaAAC
TATTTTTAGCGAATAGTTATATTTTTGTTGTCTCAGAACAAGTGTTTTGT
GGATTCGGGGCTGTTCCAGGAAGTGATAGAAAGTTTTGGCATGTAACTTT
TTGTGGCAgagcagcaaattttcaaatcttttattaGTTTTGGTATCACA
AACTAGAATAATAAAGCCCAAATAATTTTTATGCTTTCATTTATAATACA
TACATCTTCATCAGATTTTTTTACCatacaatattttgaaatataagaaT
TTTTATAAACAATATGAATAATATTATGATGGTAGAgagttttgtatatt
tttatgcaCACATTGTATAAATCTCACATATATAATTtggatttttatta
tttttaatgattttctctGATTCTCTTCAGTTTCTTTCTAGTTCTTCACT
TTACCTGCATCTATTCTTCATTTATCATGTTTacagaaaaataagaaaat
atgtcacaaaaatttgcgaaaaaccTTCTTATAACAGGTGCCAACCGTGG
TATTGGTTTGGAATTTGTGAAGAAGTTGGCGAGCAGAGTTGATATTTTAT
TTGCTGGATGTCGCAAACCTTCTGAAGCTAAGGAACTGAATGCTTTGAAG
GATGTGCACAACAACATCCATGTGGTGGAAATAGATGTCACATGCGAAAA
AAACATCCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAGCCG
GATTGAGTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCTGATGAC
AAAGTCACTGAACTGACATTGGAAAAATTTAATCATATTTTTAGTGTTAA
TATCTTTGGCCCCTCAATAGTTTGTAAGCACTCGCTAAATTTACTCCAAC
AAGCTACCAAAACACATTCAGATCAAATCATCACAAAGCCTTTAATCGTT
AACATTGGGTCAGACTTATCATCAGTCAGCATTATGGACCGCAATATGGG
CTTCTACTATTCTTATAATATGTCCAAGAGCTCTTTGAACATGTTTACCA
AAATGTTATCGCTGGAGATCGAACAAGACGGTATTGATGTCATTGCTATC
CACCCTGGGTGGGTACAAACAGATATGGGCGGTGCAAATGGCACCCTCAC
TGTTCAGCAATNGATTGACATGATGTTAGAGACGTTATCCACCCTCAGAC
AAGATCAAAATGGAACCTTGATCGATTTCAAAGGAGAAACCATCCCATAT
TGAGTTAGAATCAAACCACTCGAACATGCATTAGAAATCTATTAAATAGA
Tattaatattatttttaatttagaataaattatttttacaggttacagaa
aaataaaaaaatatgtcacaaaaatttgcgaaaagcCTTCTTATAACAGG
TGCCAATCGTGGTATTGGTTTGGAATTTGTGAAGAAGTTGGCGAGCAGAG
TTGATATTTTATTTGCTGGTTGTCGCAAACCTTCTGAAGCTAAGGAACTG
AATGCTTTGAAGGATGCGCACAACAACCTTCATGTAGTGGAAATAGATGT
CACTTGCGAAAAAAACATCCAAGCTTGCATTGAAGAAGTCTCTAAAGTTT
GCGGTGAAGCCGGATTGAGTTGTTTGATTAACAATGCAGGAGCTAACAAG
AAGCCGGATAACAAAGTTACCGAACTATCATTGGATGACCTCAAACGTAT
TTTTAGTGTCAACACTTTTGGTCCTCCCATAGTGTGTAAGCATTCCCTAT
CATTGCTTCAACAAGCTGCCAAAACACATTCAGATCAAATCATCACAAAG
CCTCTTATCGTTAACATTGGGACTGGTTTATCGTCTGTCAGCAGAATGAA
TCGCGATATGAGTTGCTATTATTCCTATAATATGTCCAAGAGCCCTTTGA
ACATGTTTACCAAAATGTTATCGCTGGAAATCGAAGAAGACGGTATTGAT
GTCATTGCTATCCACCCTGGGTGGGTACAAACAGATATGGGCGGTTCAAA
TGCCACCCTCACTGTTCAACAATCAATTGACATGATGTTAGAGACGTTAT
CCAATCTCAGACAAGAACAAAATGGAACCTTAATCAATTTCAAAGGAGAA
ACAATCCCATATTGAGAGAGACTTGGTTAAATGGATTATTTTATTGGGAT
GAGAGGAGAGAGACTCCAGAGACGAGAggtcaaaattgcaaaaaaatttg
tatcTTATTTAAAATAGAATGAAGTTTAGAGTGACTTCGTCTATTAGAGT
AACAAGTGAAATAATATCAAGCTGATCAGGGTAGAGACATGTAAGCTGTC
AGTTAGGTAACagtaaaaatatcaaagaaataaaaacatcaatgaACATG
ACGGCcaatgaattttcattttcttgtgATCCAAACTTCTGCAGTGTTTG
TGGTTCAATCCTCCCTCTCCCCGTCACTGGTTCAGATGTCCTCTCCTGCA
AGTTATGCTCAACTTCCATCAGTGTAGATTCTCTTGAAGGTATCGTCATC
CATTCGTTCAAGAAGTTTAATCAACACAAACTCAAATCATCTGATGAGAT
GGAACGAATGAAAGAAATGGAAGAGAGTGCGACCAACCATGGACCTGTGG
TCAAACGAGAATGTTCGAAATGTCATCATAAGAAAATGACATATACGACG
CGTCAAACGAGGTCGGCCGATGAGGGCCAGACAGTCTTTTTCACATGCTT
GAAATGCAATTTCACCGAGACCGAATATTCATAATGATTCTAATCGATAT
TTTTCTGCTGGaaatttgataataattttaGCTGGAGAAGGTAACAGTTT
CTTGTACTTTTTGGAAATTGGTTGTACTTGCGTGAGTTATTGATATGCTG
AAATTGTATCTTACATTGGTATTATTAGATCGATGGAAGACAAAATACTT
AGTTCCATTGTCATTGCATCATAGCTAGATGGTTATGCACTACGAATATC
TTTTTGGAACAAGATGTTTATAATTCAATGtcaattgattttaaaagcTC
TTAAGCTTCTTACATCTCATTCAAACACACTGATGATAACTGTATCATAC
AGCTATATAATCTATTTCCGATTACGTAATTACAATGATTTTTCCTCACA
GTTTTTTATTCCGTATGATTATTTATGGTCTTTGGAAGAGATGATATCTA
CACATTTGTAATATATATTTGAGCAACTCTTGTTATGACTTGTTGTATGT
CGTTAAGAAGGTCTTAGTTCTATACATTATTATCTATATATGCAAGATTT
GAAATGAATTGGTATTCACAATATCTAAACATTTCCAATCATATATATTT
AGTCTTATACTTCTCTTTCAATACCAATTTGTTATGTCGTTGGAAAGGTC
TTAATTCTATACATTA
Run BLAST on NCBI

protein sequence of TCONS_00005371-protein

>TCONS_00005371-protein ID=TCONS_00005371-protein|Name=TCONS_00005371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MSQKFAKNLLITGANRGIGLEFVKKLASRVDILFAGCRKPSEAKELNALK
DVHNNIHVVEIDVTCEKNIQACIEEVSKVCGEAGLSCLINNAGALIKPDD
KVTELTLEKFNHIFSVNIFGPSIVCKHSLNLLQQATKTHSDQIITKPLIV
NIGSDLSSVSIMDRNMGFYYSYNMSKSSLNMFTKMLSLEIEQDGIDVIAI
HPGWVQTDMGGANGTLTVQQXIDMMLETLSTLRQDQNGTLIDFKGETIPY
Run BLAST on NCBI

transcript from alignment at sc0000052:755467..765553-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005371 ID=TCONS_00005371|Name=TCONS_00005371|organism=Clytia hemisphaerica|type=transcript|length=10087bp|location=Sequence derived from alignment at sc0000052:755467..765553- (Clytia hemisphaerica)
TGCCAACCGTGGTTTAGGTTTGGAATTTGTGAAGAAGTTGGCGAGCAGAG
TTGATATTTTATTTGCTGGATGTCGTAAACCTTCTGAAGCTTAAGTATAC
TCTTATATTGATTACATTTTTCTCCGAAGATATTTTTGAAGCAATTTCTT
TTTCCATGGTTCTCTACTTAGGATAGTTTGTAGAAGACAATTTGGTTGGC
AAACAATATTATCCTCTAGAGGATGCATGATCTCTCATTTTCGCTGCTAT
TTTCTACTTTCCTGTCTTCTATTCTGATTTTCTGACTTTCTCAAGTGTTC
TTAACTGTTTTTACATATTTTTTCTAAAGTTCGCTTGAACCACCAAATGC
AACCAAAGCAACCTTTGGTTTGCAAACCCAATGCCTAACCTCTTACGTTA
CTGAGACACAGCAGAATACTGTCATTCATAAATACTGTCAACTGCTCTAA
CTTGGGACGGTTGGTCGACTGGGACATGGGACTGTTTGATATCTGGCCTG
TATTTTTTCACTTACTATTAAATCTCTTTGACCACAAATTTGTTTTGATA
ATTCCACCAAGTTTATCAATCATACTTTCTGTCATACTGTAACATGTCAC
AATATCTTCCACTACGGAATAACTTTCATATTTCGATTTAAAAGCCTACT
CGCTGCGAAAGAGAAATTGTGTATTTTTTAATATGCCTTTCATTAACTCA
AATCAAATGACTTTGGAGGTTTGGTGAAATGGTGGCCAAATTGTCGTCCC
ATGTTTTGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTACTTATAGCG
TTAAATTACATACCTTAATTGAAATAGCTCCCAACCCTACTTGTGCCCCT
ACAAGGATCTCTACAGCACCCTAACTTAATTCAGAGTGTATGAGTGCCCC
TAAGAAGGCCTTTGGCCTTATATTGTGACTCACAAGCTCTAACCCTAACC
CTAACTGATAATAACTGAACCCTGTCTAGGTACGCAGACTGAAAAATTCG
ACTTGCATCCTGGAGGATGATATTGTTTCCCAACCCAATCAAGCAGTCAT
TCATTTAATAAAAGAAATCGTCAGCTTATATAAAAAATTTGACAAGAGTA
TTTTATTTTTAGGAATTGAATGAGCTTAAAAACTTTCACCACAATGTTCA
TATATTAGAGCTAGGTAAATTTCATCCACTCTTTTAATAAATATTCCGTT
TTCATGAAACTCTGAGTTTGAAACAAAGATATTGTGTCAACTCTTTATTA
TAATAACGCTCTATTTACTGATTGAGCACTCTACGAGGAGAAGATATACA
CCCTCTACAGTTTTCATATTTGTTAAATATCTTATGGACTTGGCTAATTT
TTATTTGGAAGATTTTTAACCAGGTCTGTCTTCATTGTCTATCTTTTGTC
AGATGTCACTTGTGAGAAAAGTATCCAAGCTTGCATTGAAGAAGTCTCCA
AAGTTTGCGGTGAAGTCGGATTGAGTTGTTTGATCAACAATGCAGGAGCA
ATAAAGAAGCCGGATAACAAAGTTACTGAACTATCATTGGATGATCTCAA
ACGTATTTTTAGTGTTAACACCTTTGGCCCGTCAATAGTTTGTAAGGTAG
AATAAATAGATCTTAGCAACACGTCCTTTAATTTGATATTAAATTTTTCC
TGGCACTTGTACCTCTAGATCAAAAATATGTGTCAAACATTATTAGTTGA
TATATATGGTCTATTTGTATTTGTTCTTTTTTGTGCTGATTTATGCAAAT
TATCTCCACTTGATTTCGTTTTCCTGACTTTCAATTAATTGATAGTCTAA
AGAAGTGTTTTCTTATAGCATGCACTCGTTATGCTCCAACAGGCAGCTAT
GAAAACATCTAGTGATTACATCATCTCAAAGCCACTAATCATAAATATTG
GAACCATTTTATCTTCGATTGGGAGTGTGGAACGATTTGGACTCTCCCAT
TACAGCTACAAAATGTCAAAGGTACCCTACTGTGTTATTTCTTTAGCTAT
AGGCTTAACCAACCTAGCTCTCTGCTTTTAAATTGTTCAAACTAGCATAG
GAAAGATCTTTCTGCCAACAGCCTGGCCTCTTGTCTGGAGAAAAATGACA
TTGGAAACTATTCTATTTTAACTGTATTTGATTGCTTTTAGAGTTCATTG
AATATGTTTACAAAAATGTTGTCTTTGGAGCTCAAACAGGATGACATCGG
TGTTATTTGCATCAACCCTGGTTGGGTTCAAACAGAGCTTGGAGGTTGGA
ATGCCACTTTGACAGTTGAGCAGTCAGTTGATCAGATGTTAAAAACTTTA
TCAATTTTGAAGCCTGACCAAATGGGATCACTCATAGATATTGATGGAAG
TATTATTCCTTATTGATATTCCCTTTGGAAAAGCTAATTCATATTCCTGA
TATATTGTCAATCAAAATTGTCTTCAATTAACCTGAATCTAGCAAGAACT
AATTTTGGCAATCAGAAAAAATCCTAAAAAAGATTTTTCAAAGATTCAGC
AAGAGACTCATTTTGCTGAGTCAGCAATTTTTTTAGTTTTAACAAAACTA
TTTTTAGCGAATAGTTATATTTTTGTTGTCTCAGAACAAGTGTTTTGTGG
ATTCGGGGCTGTTCCAGGAAGTGATAGAAAGTTTTGGCATGTAACTTTTT
GTGGCAGAGCAGCAAATTTTCAAATCTTTTATTAGTTTTGGTATCACAAA
CTAGAATAATAAAGCCCAAATAATTTTTATGCTTTCATTTATAATACATA
CATCTTCATCAGATTTTTTTACCATACAATATTTTGAAATATAAGAATTT
TTATAAACAATATGAATAATATTATGATGGTAGAGAGTTTTGTATATTTT
TATGCACACATTGTATAAATCTCACATATATAATTTGGATTTTTATTATT
TTTAATGATTTTCTCTGATTCTCTTCAGTTTCTTTCTAGTTCTTCACTTT
ACCTGCATCTATTCTTCATTTATCATGTTTACAGAAAAATAAGAAAATAT
GTCACAAAAATTTGCGAAAAACCTTCTTATAACAGGTGCCAACCGTGGTA
TTGGTTTGGAATTTGTGAAGAAGTTGGCGAGCAGAGTTGATATTTTATTT
GCTGGATGTCGCAAACCTTCTGAAGCTAAGGTATGAATTTATTTTTCAGT
GCAAGAAAAGATCTTTATACTCTATATACTAACAGCAACGGACTAGCAGT
ACTTTCTCCTCATAGTTCGCCAACAATCGCTGTCTTACCTTTCAATACGC
CTACATTACAGTATATTTCTTTAACTATCAACTGAGCTTTTCTGAGACAA
AGCATTTAGATTGAGTCAACTCATCTTCAGTTTAAGACTTCAAAGAGAAC
ATTAGTTTTTTGTAGCCTGGAAAGAGAAAAGGTTAGTATGTAATTGGAAG
TGTCACTAATGTTGCATGCCTGTCTATGTAGAGGCTTTGTAGCTGTGTAT
AAGGCTTTGAGGTTATAGCAAAATTTATAATGATTCTTATATTCCTAATT
TGCATAGTTGATTCATTTTTCAGGAACTGAATGCTTTGAAGGATGTGCAC
AACAACATCCATGTGGTGGAAATAGGTTGGTGAAATCTGAAAATTCAGCC
GGGAAAATCCGAATATCTGGGAGGGGAAAACAGTAAATTCAATTAGAAAG
AACTGAAAGCTCGGTTTGGATCTGAAAACTCAATTGGAAAACCCAAAAAC
TCAATTGGAAAACCTGAAAACATGGTTTGTAATTATTTACAGTTTGACAC
ACTCTTTTTGTTAAAGTATTTTCATACTTCTCTTACATCCACTCTGACCA
GGTTATCTGAAAACCCAGCACTGCTGTTAACGAAATATAATAAATACCAT
TTGGTCAAAAAGGTACAACCTATCAAACAATTGCAACAATGTTTATTTAT
TCAGACAATGTAGTGGCTGAACAATGGACTAACTGTCTTTCTTCTCCGTT
TCAGATGTCACATGCGAAAAAAACATCCAAGCTTGCATCGAAGAAGTCTC
CAAAGTTTGTNACCCTTCTTCTCCGTTTCAGATGTCACATGCGAAAAAAA
CATCCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAGCCGGAT
TGAGTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCTGATGACAAA
GTCACTGAACTGACATTGGAAAAATTTAATCATATTTTTAGTGTTAATAT
CTTTGGCCCCTCAATAGTTTGTAAGGTAAAAGGTGTTTGGAAATCTCTTT
TCTGTTTAGTATTTTTGTCAATTCAGAGCTTTCCTTCTTATGACGACTAA
CAGTAAGAGAAAGTTTNGTTTAGTATTTTTGTTAATTCAGAGCTTTCCTT
CTTATGACGACTAACAGTAAGAGAAAGTTTCATTCGATTTTGAATCTTTT
TGGTAATTCAAAGAGAGCACCTGGCCTCCTGGACTGTAAAATTTACAATG
ATCAGATGAACTATGAAACTGTGGGAGTATCCGATCCTAATTCCAACTGA
ACTTTCTCCCATTTCAGCACTCGCTAAATTTACTCCAACAAGCTACCAAA
ACACATTCAGATCAAATCATCACAAAGCCTTTAATCGTTAACATTGGGTC
AGACTTATCATCAGTCAGCATTATGGACCGCAATATGGGCTTCTACTATT
CTTATAATATGTCCAAGGTATTGAGATAATTATATCACACTAACAATCAG
TTCTCGACTCGCCTGTAGTTTAGCCATTTCTGGATACCGTTCTGTTGAAT
GGGGTTGTATTAATTGATACGACATTACTGTATCACAAAAGAGAATATCA
AGTTTAGGAAAGCTCTACCTTTTAAGGGAATGAATTAATCAATTAATGCG
AATATGGTCTTTTTTCGCAAACGTAAATTTCGCAAAAACTTGAAAATTAC
GGTTGTTTGCATTAATAAGTTCCGCATTTTTTTTCTAAATTTTTCTGATT
TATGAGGTGTAAACCCTAAATATCGTTTTCTGGGCTCCAGGGCATAAATA
AAGCACTTGTATATTTGACATTATTCTGATACTCAATAAGTGCCTAAACC
AGATGTTACCTTAAGAGAAGAAATTTTGGTGGGAAGGGGCCCATTTTAGT
GCAATTTGGCAGAATTTATTTTGGCGAATTGATTAAAATCTCTAAATTTG
GCAAGGATTAATTTTGGCGAACGACACGTTATTTGTTAAAAATTTTTAGC
TGAGAATCGAGAAGGACAGGCGATTTTAGGGAAAATGGAGACTTAAGTGA
AAGAAATTTAATCTAATTTAATTTTGGAATTTTGGTGAATTTGGCAAGAT
TTTTAAATTTCTTCCCTTAAAGGTAGAATGCAATAAAGAAAGACATAAAG
CAATAAAGAAAACAAGATTCTTAAAATCAATAGTTCCTCATTATTATAAT
CATACCAAATTATTTCATTGGAAATTTTTTTGGTTTGTTCTGCTTCTTGA
AAAGGAAAAAACCTTTTCAAACGCTATTTCACATAATTCCGTAAAATCTA
TAAAATGGGCCTATTCGCATTATAATTTTTTCTCCAAAACATAAAACTAA
TATTCCTGAGAAATCTTGCAGCGAAACAATGATAATGTAACCTTCAGAAA
GCTCCTTAACTTTTCTATGTTTTAAATTTGTCTAACTTTTTAGAGCTCTT
TGAACATGTTTACCAAAATGTTATCGCTGGAGATCGAACAAGACGGTATT
GATGTCATTGCTATCCACCCTGGGTGGGTACAAACAGATATGGGCGGTGC
AAATGGCACCCTCACTGTTCAGCAATCAATTGCCATGATGTTAGATACGT
TATCCAACCTCAGACAAGATCAAAATGGAACCTTAATCAATTTCAAAGGA
GAAAACATCCCATATTGAGAGAGACTTGAACATNGATTGACATGATGTTA
GAGACGTTATCCACCCTCAGACAAGATCAAAATGGAACCTTGATCGATTT
CAAAGGAGAAACCATCCCATATTGAGTTAGAATCAAACCACTCGAACATG
CATTAGAAATCTATTAAATAGATATTAATATTATTTTTAATTTAGAATAA
ATTATTTTTACAGGTTACAGAAAAATAAAAAAATATGTCACAAAAATTTG
CGAAAAGCCTTCTTATAACAGGTGCCAATCGTGGTATTGGTTTGGAATTT
GTGAAGAAGTTGGCGAGCAGAGTTGATATTTTATTTGCTGGTTGTCGCAA
ACCTTCTGAAGCTAAGGTATGAATTTATTTCAAAGCAAAAGAAAAGTTAG
TGCAAGAGAGAGCTATTGTAAAAGATGTAAATACTTCTCATTGTAGCTCC
AATCACAATCAGCGCATGCCAATAATAACATACTGTACTTCAGGTGTATT
GAAAGATTGTAAATATCAGACAGGGATTGTTGGCGAACTATGAGGGAAAA
GTACTGTTTGTCCGCTGCTGCTGTACAGGCTGTGTATAGGCTTTGATGTT
AAGCAAAGTTTATTATGATTCTTCTGATTTTGTATTGTTGATTAATTTCA
GGAACTGAATGCTTTGAAGGATGCGCACAACAACCTTCATGTAGTGGAAA
TAGGTTGGTGAAATCTCGAAGGTCAGCCGGGAAAACTATCCAGGTGGGAA
AATCCGAATGGCCGAGTGGGGAAAACATTAATTTCGATTAGTCAATTTGT
AACTGGGGAGGGAAAACAGTAAACTCGATTAGTCAATTTGTAACTGGGAA
GGGTAAACTCAGCTTGAAAATATAACATACGTTATTGTATATATGCCTCA
AAAAAGATTGAAATATCTCTTTCGTAGATGGGATTGATGCCAGCAGGTGC
CAATACTATACAATTTCAAACTAGTCCTGTACTATCCTGTAGCACAATTT
AGTTCTATAGCCATTCGTGAAAATGAACCACCACGGTTTCTTTATCTACC
ATTCACGCTGAATCTGTTGGTAGCATCGGATATTTGATTTCCAGACCTCG
AAAAAAACCGTTAGTAAAGGGTCCCCTTGATAAGTTCAATCGATTCACTA
AAAATCGATTTACTCGAAAACTGCAGGAGATTCAAAGGGCATTTTCTTTT
TGTCAATTCTACACCCTATTAGAAGCATAATATCAAAAATTGACTAACTG
ATCTAAGGGGTGGCCTACGAAGTGACACAATTCACTACCTCGGCCGATAG
TCTAGTGTTCTGGATCAACTGCTTGACCCCCCCCCCTGACATTTTGATAC
ATACTTTCAAAATGTTTATTCAATCAAATAATGTAACGCCAGAACAGTGG
GCTGGGGACTAACAACACTTTATTTTTTTCCATTCATTTCAGATGTCACT
TGCGAAAAAAACATCCAAGCTTGCATTGAAGAAGTCTCTAAAGTTTGCGG
TGAAGCCGGATTGAGTTGTTTGATTAACAATGCAGGAGCTAACAAGAAGC
CGGATAACAAAGTTACCGAACTATCATTGGATGACCTCAAACGTATTTTT
AGTGTCAACACTTTTGGTCCTCCCATAGTGTGTAAGGTAAAAAAGATGTT
TGCGATTCTCCAAGGTTTCTTGTCTCGCCCTCTAATTTGAGCCTCTATGA
TTCCTCTATTTGTTACTCAAACTAACACATTTTTTTCTGCTCAGCTTGGA
AAGTCATACTAAACGATTCCCTATAATTGTTTTATATTTAATTCCTTTAA
AAATGTCGAATTACAGAGAGAGTTAATAGCGAGATTATGTATCGGAGATA
TTCTACGGCTACGGTTGCGGGGCTGCCCATGCGGGTCGTCACCAAAGGCG
ACATGTCGTTGTCTACTTTGCTCTGTACGGGAAATACACCAAAACACCGT
ATAAGCAAAGTCGACATAATGCCGTACGTCAAATATCGGACTTGCTTTCA
CCCGCCATTACTTGCCTTACTCGCCATTTCCCTCGCCCTTCAGCCGTAGC
CGTAGAGAATTCCAGATACATAATCTCGCTAATGAAAGCTGTGTACACGA
GCTTCATCGCCTGAGCTTCCTCTCTAATCTTGATTTACTTCATGGACCTT
TCAGCATTCCCTATCATTGCTTCAACAAGCTGCCAAAACACATTCAGATC
AAATCATCACAAAGCCTCTTATCGTTAACATTGGGACTGGTTTATCGTCT
GTCAGCAGAATGAATCGCGATATGAGTTGCTATTATTCCTATAATATGTC
CAAGGTAAAGATTTCTTGTTACATTAGCAATTATTTCTCGACTTGCCTAT
AGTTGTGCCATTGTTATAGTTTGAAAGAGTTTAAAAGAATGTCTAAGCTT
TCTTTAAAATTTCAGAAAAATCTTGTAGCGTAACAATAAAAATGGAGTCT
TTGGAAAATCTAACTTGACGATCTTCTGTTTGTTATTTGTCTCTTGACTT
TTTAGAGCCCTTTGAACATGTTTACCAAAATGTTATCGCTGGAAATCGAA
GAAGACGGTATTGATGTCATTGCTATCCACCCTGGGTGGGTACAAACAGA
TATGGGCGGTTCAAATGCCACCCTCACTGTTCAACAATCAATTGACATGA
TGTTAGAGACGTTATCCAATCTCAGACAAGAACAAAATGGAACCTTAATC
AATTTCAAAGGAGAAACAATCCCATATTGAGAGAGACTTGGTTAAATGGA
TTATTTTATTGGGATGAGAGGAGAGAGACTCCAGAGACGAGAGGTCAAAA
TTGCAAAAAAATTTGTATCTTATTTAAAATAGAATGAAGTTTAGAGTGAC
TTCGTCTATTAGAGTAACAAGTGAAATAATATCAAGCTGATCAGGGTAGA
GACATGTAAGCTGTCAGTTAGGTAAACCACTAGAACGTTCATTATAATAA
ATCTTCCTAATATATTTTTAATTTGAGATAAATTTTTGTATGATAATGTA
AAGAAGAATGTTTTTGAAAGTTTTACGAGTTTTTATGGATTCTACCAACC
GAAATTGTGTGAAAGAGCAGATTTTAATGATTTTAAGGCGATTATTTTAA
CATGACCTAAAGATGATGGTTAAGATGACCTTTTGGTTCGATTCTCCATG
TTTATAATGTTTGTATGTATTTTTCAGGTAACAGTAAAAATATCAAAGAA
ATAAAAACATCAATGAACATGACGGCCAATGAATTTTCATTTTCTTGTGA
TCCAAACTTCTGCAGTGTTTGTGGTTCAATCCTCCCTCTCCCCGTCACTG
GTTCAGATGTCCTCTCCTGCAAGTTATGCTCAACTTCCATCAGTGTAGAT
TCTCTTGAAGGTATCGTCATCCATTCGTTCAAGAAGTTTAATCAACACAA
ACTCAAATCATCTGATGAGATGGAACGAATGAAAGAAATGGAAGAGAGTG
CGACCAACCATGGACCTGTGGTCAAACGAGAATGTTCGAAATGTCATCAT
AAGAAAATGACATATACGACGCGTCAAACGAGGTCGGCCGATGAGGGCCA
GACAGTCTTTTTCACATGCTTGAAATGCAATTTCACCGAGACCGAATATT
CATAATGATTCTAATCGATATTTTTCTGCTGGAAATTTGATAATAATTTT
AGCTGGAGAAGGTAACAGTTTCTTGTACTTTTTGGAAATTGGTTGTACTT
GCGTGAGTTATTGATATGCTGAAATTGTATCTTACATTGGTATTATTAGA
TCGATGGAAGACAAAATACTTAGTTCCATTGTCATTGCATCATAGCTAGA
TGGTTATGCACTACGAATATCTTTTTGGAACAAGATGTTTATAATTCAAT
GTCAATTGATTTTAAAAGCTCTTAAGCTTCTTACATCTCATTCAAACACA
CTGATGATAACTGTATCATACAGCTATATAATCTATTTCCGATTACGTAA
TTACAATGATTTTTCCTCACAGTTTTTTATTCCGTATGATTATTTATGGT
CTTTGGAAGAGATGATATCTACACATTTGTAATATATATTTGAGCAACTC
TTGTTATGACTTGTTGTATGTCGTTAAGAAGGTCTTAGTTCTATACATTA
TTATCTATATATGCAAGATTTGAAATGAATTGGTATTCACAATATCTAAA
CATTTCCAATCATATATATTTAGTCTTATACTTCTCTTTCAATACCAATT
TGTTATGTCGTTGGAAAGGTCTTAATTCTATACATTA

Coding sequence (CDS) from alignment at sc0000052:755467..765553-

>TCONS_00005371 ID=TCONS_00005371|Name=TCONS_00005371|organism=Clytia hemisphaerica|type=CDS|length=4518bp|location=Sequence derived from alignment at sc0000052:755467..765553- (Clytia hemisphaerica)
ATNGATTGACATGATGTTAGAGACGTTATCCACCCTCAGACAAGATCAAA
ATGGAACCTTGATCGATTTCAAAGGAGAAACCATCCCATATTGAAGCTCT
TTGAACATGTTTACCAAAATGTTATCGCTGGAGATCGAACAAGACGGTAT
TGATGTCATTGCTATCCACCCTGGGTGGGTACAAACAGATATGGGCGGTG
CAAATGGCACCCTCACTGTTCAGCACACTCGCTAAATTTACTCCAACAAG
CTACCAAAACACATTCAGATCAAATCATCACAAAGCCTTTAATCGTTAAC
ATTGGGTCAGACTTATCATCAGTCAGCATTATGGACCGCAATATGGGCTT
CTACTATTCTTATAATATGTCCAAGATGTCACATGCGAAAAAAACATCCA
AGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAGCCGGATTGAGTT
GCTTGATCAACAATGCGGGAGCATTAATTAAACCTGATGACAAAGTCACT
GAACTGACATTGGAAAAATTTAATCATATTTTTAGTGTTAATATCTTTGG
CCCCTCAATAGTTTGTAAGGAACTGAATGCTTTGAAGGATGTGCACAACA
ACATCCATGTGGTGGAAATAGATGTCACAAAAATTTGCGAAAAACCTTCT
TATAACAGGTGCCAACCGTGGTATTGGTTTGGAATTTGTGAAGAAGTTGG
CGAGCAGAGTTGATATTTTATTTGCTGGATGTCGCAAACCTTCTGAAGCT
AAGATNGATTGACATGATGTTAGAGACGTTATCCACCCTCAGACAAGATC
AAAATGGAACCTTGATCGATTTCAAAGGAGAAACCATCCCATATTGAAGC
TCTTTGAACATGTTTACCAAAATGTTATCGCTGGAGATCGAACAAGACGG
TATTGATGTCATTGCTATCCACCCTGGGTGGGTACAAACAGATATGGGCG
GTGCAAATGGCACCCTCACTGTTCAGCACACTCGCTAAATTTACTCCAAC
AAGCTACCAAAACACATTCAGATCAAATCATCACAAAGCCTTTAATCGTT
AACATTGGGTCAGACTTATCATCAGTCAGCATTATGGACCGCAATATGGG
CTTCTACTATTCTTATAATATGTCCAAGATGTCACATGCGAAAAAAACAT
CCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAGCCGGATTGA
GTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCTGATGACAAAGTC
ACTGAACTGACATTGGAAAAATTTAATCATATTTTTAGTGTTAATATCTT
TGGCCCCTCAATAGTTTGTAAGGAACTGAATGCTTTGAAGGATGTGCACA
ACAACATCCATGTGGTGGAAATAGATGTCACAAAAATTTGCGAAAAACCT
TCTTATAACAGGTGCCAACCGTGGTATTGGTTTGGAATTTGTGAAGAAGT
TGGCGAGCAGAGTTGATATTTTATTTGCTGGATGTCGCAAACCTTCTGAA
GCTAAGATNGATTGACATGATGTTAGAGACGTTATCCACCCTCAGACAAG
ATCAAAATGGAACCTTGATCGATTTCAAAGGAGAAACCATCCCATATTGA
AGCTCTTTGAACATGTTTACCAAAATGTTATCGCTGGAGATCGAACAAGA
CGGTATTGATGTCATTGCTATCCACCCTGGGTGGGTACAAACAGATATGG
GCGGTGCAAATGGCACCCTCACTGTTCAGCACACTCGCTAAATTTACTCC
AACAAGCTACCAAAACACATTCAGATCAAATCATCACAAAGCCTTTAATC
GTTAACATTGGGTCAGACTTATCATCAGTCAGCATTATGGACCGCAATAT
GGGCTTCTACTATTCTTATAATATGTCCAAGATGTCACATGCGAAAAAAA
CATCCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAGCCGGAT
TGAGTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCTGATGACAAA
GTCACTGAACTGACATTGGAAAAATTTAATCATATTTTTAGTGTTAATAT
CTTTGGCCCCTCAATAGTTTGTAAGGAACTGAATGCTTTGAAGGATGTGC
ACAACAACATCCATGTGGTGGAAATAGATGTCACAAAAATTTGCGAAAAA
CCTTCTTATAACAGGTGCCAACCGTGGTATTGGTTTGGAATTTGTGAAGA
AGTTGGCGAGCAGAGTTGATATTTTATTTGCTGGATGTCGCAAACCTTCT
GAAGCTAAGATNGATTGACATGATGTTAGAGACGTTATCCACCCTCAGAC
AAGATCAAAATGGAACCTTGATCGATTTCAAAGGAGAAACCATCCCATAT
TGAAGCTCTTTGAACATGTTTACCAAAATGTTATCGCTGGAGATCGAACA
AGACGGTATTGATGTCATTGCTATCCACCCTGGGTGGGTACAAACAGATA
TGGGCGGTGCAAATGGCACCCTCACTGTTCAGCACACTCGCTAAATTTAC
TCCAACAAGCTACCAAAACACATTCAGATCAAATCATCACAAAGCCTTTA
ATCGTTAACATTGGGTCAGACTTATCATCAGTCAGCATTATGGACCGCAA
TATGGGCTTCTACTATTCTTATAATATGTCCAAGATGTCACATGCGAAAA
AAACATCCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAGCCG
GATTGAGTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCTGATGAC
AAAGTCACTGAACTGACATTGGAAAAATTTAATCATATTTTTAGTGTTAA
TATCTTTGGCCCCTCAATAGTTTGTAAGGAACTGAATGCTTTGAAGGATG
TGCACAACAACATCCATGTGGTGGAAATAGATGTCACAAAAATTTGCGAA
AAACCTTCTTATAACAGGTGCCAACCGTGGTATTGGTTTGGAATTTGTGA
AGAAGTTGGCGAGCAGAGTTGATATTTTATTTGCTGGATGTCGCAAACCT
TCTGAAGCTAAGATNGATTGACATGATGTTAGAGACGTTATCCACCCTCA
GACAAGATCAAAATGGAACCTTGATCGATTTCAAAGGAGAAACCATCCCA
TATTGAAGCTCTTTGAACATGTTTACCAAAATGTTATCGCTGGAGATCGA
ACAAGACGGTATTGATGTCATTGCTATCCACCCTGGGTGGGTACAAACAG
ATATGGGCGGTGCAAATGGCACCCTCACTGTTCAGCACACTCGCTAAATT
TACTCCAACAAGCTACCAAAACACATTCAGATCAAATCATCACAAAGCCT
TTAATCGTTAACATTGGGTCAGACTTATCATCAGTCAGCATTATGGACCG
CAATATGGGCTTCTACTATTCTTATAATATGTCCAAGATGTCACATGCGA
AAAAAACATCCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTGAAG
CCGGATTGAGTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCTGAT
GACAAAGTCACTGAACTGACATTGGAAAAATTTAATCATATTTTTAGTGT
TAATATCTTTGGCCCCTCAATAGTTTGTAAGGAACTGAATGCTTTGAAGG
ATGTGCACAACAACATCCATGTGGTGGAAATAGATGTCACAAAAATTTGC
GAAAAACCTTCTTATAACAGGTGCCAACCGTGGTATTGGTTTGGAATTTG
TGAAGAAGTTGGCGAGCAGAGTTGATATTTTATTTGCTGGATGTCGCAAA
CCTTCTGAAGCTAAGATNGATTGACATGATGTTAGAGACGTTATCCACCC
TCAGACAAGATCAAAATGGAACCTTGATCGATTTCAAAGGAGAAACCATC
CCATATTGAAGCTCTTTGAACATGTTTACCAAAATGTTATCGCTGGAGAT
CGAACAAGACGGTATTGATGTCATTGCTATCCACCCTGGGTGGGTACAAA
CAGATATGGGCGGTGCAAATGGCACCCTCACTGTTCAGCACACTCGCTAA
ATTTACTCCAACAAGCTACCAAAACACATTCAGATCAAATCATCACAAAG
CCTTTAATCGTTAACATTGGGTCAGACTTATCATCAGTCAGCATTATGGA
CCGCAATATGGGCTTCTACTATTCTTATAATATGTCCAAGATGTCACATG
CGAAAAAAACATCCAAGCTTGCATCGAAGAAGTCTCCAAAGTTTGTGGTG
AAGCCGGATTGAGTTGCTTGATCAACAATGCGGGAGCATTAATTAAACCT
GATGACAAAGTCACTGAACTGACATTGGAAAAATTTAATCATATTTTTAG
TGTTAATATCTTTGGCCCCTCAATAGTTTGTAAGGAACTGAATGCTTTGA
AGGATGTGCACAACAACATCCATGTGGTGGAAATAGATGTCACAAAAATT
TGCGAAAAACCTTCTTATAACAGGTGCCAACCGTGGTATTGGTTTGGAAT
TTGTGAAGAAGTTGGCGAGCAGAGTTGATATTTTATTTGCTGGATGTCGC
AAACCTTCTGAAGCTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003049XLOC_003049Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005371-proteinTCONS_00005371-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005371-exon-sc0000052-1575043694:765460..765553TCONS_00005371-exon-sc0000052-1575043694:765460..765553Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:764390..764441TCONS_00005371-exon-sc0000052-1575043694:764390..764441Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:763958..764151TCONS_00005371-exon-sc0000052-1575043694:763958..764151Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:763583..763735TCONS_00005371-exon-sc0000052-1575043694:763583..763735Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:762424..763412TCONS_00005371-exon-sc0000052-1575043694:762424..763412Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:761979..762030TCONS_00005371-exon-sc0000052-1575043694:761979..762030Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:761329..761522TCONS_00005371-exon-sc0000052-1575043694:761329..761522Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:760887..761036TCONS_00005371-exon-sc0000052-1575043694:760887..761036Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:759780..759910TCONS_00005371-exon-sc0000052-1575043694:759780..759910Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:759338..759672TCONS_00005371-exon-sc0000052-1575043694:759338..759672Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:759001..759052TCONS_00005371-exon-sc0000052-1575043694:759001..759052Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:758068..758261TCONS_00005371-exon-sc0000052-1575043694:758068..758261Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:757400..757549TCONS_00005371-exon-sc0000052-1575043694:757400..757549Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:756783..757198TCONS_00005371-exon-sc0000052-1575043694:756783..757198Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1575043694:755467..756526TCONS_00005371-exon-sc0000052-1575043694:755467..756526Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:765460..765553TCONS_00005371-exon-sc0000052-1510915933:765460..765553Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:764390..764441TCONS_00005371-exon-sc0000052-1510915933:764390..764441Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:763958..764151TCONS_00005371-exon-sc0000052-1510915933:763958..764151Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:763583..763735TCONS_00005371-exon-sc0000052-1510915933:763583..763735Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:762424..763412TCONS_00005371-exon-sc0000052-1510915933:762424..763412Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:761979..762030TCONS_00005371-exon-sc0000052-1510915933:761979..762030Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:761329..761522TCONS_00005371-exon-sc0000052-1510915933:761329..761522Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:760887..761036TCONS_00005371-exon-sc0000052-1510915933:760887..761036Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:759780..759910TCONS_00005371-exon-sc0000052-1510915933:759780..759910Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:759338..759672TCONS_00005371-exon-sc0000052-1510915933:759338..759672Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:759001..759052TCONS_00005371-exon-sc0000052-1510915933:759001..759052Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:758068..758261TCONS_00005371-exon-sc0000052-1510915933:758068..758261Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:757400..757549TCONS_00005371-exon-sc0000052-1510915933:757400..757549Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:756783..757198TCONS_00005371-exon-sc0000052-1510915933:756783..757198Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1510915933:755467..756526TCONS_00005371-exon-sc0000052-1510915933:755467..756526Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:765460..765553TCONS_00005371-exon-sc0000052-1491911889:765460..765553Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:764390..764441TCONS_00005371-exon-sc0000052-1491911889:764390..764441Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:763958..764151TCONS_00005371-exon-sc0000052-1491911889:763958..764151Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:763583..763735TCONS_00005371-exon-sc0000052-1491911889:763583..763735Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:762424..763412TCONS_00005371-exon-sc0000052-1491911889:762424..763412Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:761979..762030TCONS_00005371-exon-sc0000052-1491911889:761979..762030Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:761329..761522TCONS_00005371-exon-sc0000052-1491911889:761329..761522Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:760887..761036TCONS_00005371-exon-sc0000052-1491911889:760887..761036Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:759780..759910TCONS_00005371-exon-sc0000052-1491911889:759780..759910Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:759338..759672TCONS_00005371-exon-sc0000052-1491911889:759338..759672Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:759001..759052TCONS_00005371-exon-sc0000052-1491911889:759001..759052Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:758068..758261TCONS_00005371-exon-sc0000052-1491911889:758068..758261Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:757400..757549TCONS_00005371-exon-sc0000052-1491911889:757400..757549Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:756783..757198TCONS_00005371-exon-sc0000052-1491911889:756783..757198Clytia hemisphaericaexon
TCONS_00005371-exon-sc0000052-1491911889:755467..756526TCONS_00005371-exon-sc0000052-1491911889:755467..756526Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:755467..765553 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.0744	16.4213	12.9751	15.4679	17.9526	13.0884	23.8096	22.4921	19.4098	18.0541	17.015	16.9444	10.9967	13.5493	9.25234	14.695	12.8798	17.8862	8.23438	7.54663	5.60988	7.10176	11.1579	9.98092	10.2403	13.4512	4.97127	6.37513	3.6826	4.55772
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
Blast
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BLAST of TCONS_00005371 vs. Swiss-Prot (Human)
Match: RPA12 (DNA-directed RNA polymerase I subunit RPA12 OS=Homo sapiens GN=ZNRD1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.302e-25
Identity = 58/130 (44.62%), Postives = 75/130 (57.69%), Query Frame = 3 
Query: 3192 MNMTANEFSFSCDPNFCSVCGSILPLPVTGSDVLSCKLCSTSISVDSLEGIVIHSFKKFNQHKLKSSDEMERMKEMEESATNHGPVVKRECSKCHHKKMTYTTRQTRSADEGQTVFFTCLKCNFTETEYS 3581
            M++     SF  D +FCS CGS+LPLP    D ++C  C  +I+V   EG V+ +   F  H+L ++  M     +EE     GPVV R C +C H+ M Y TRQ RSADEGQTVF+TC  C F E E S
Sbjct:    4 MDLANTCSSFQSDLDFCSDCGSVLPLP-GAQDTVTCIRCGFNINVRDFEGKVVKTSVVF--HQLGTAMPMS----VEEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKFQEKEDS 126
The following BLAST results are available for this feature:
BLAST of TCONS_00005371 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RPA127.302e-2544.62DNA-directed RNA polymerase I subunit RPA12 OS=Hom... [more]
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