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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005317 ID=TCONS_00005317|Name=TCONS_00005317|organism=Clytia hemisphaerica|type=transcript|length=405bp
ACAAAGACGTAGATGAAAATGAACAAACGATCCAAGTATCTAATTATATT
GtccatgaaaattaccaaaaccCGCGGTTGAGTAATGATCTAGCTCTCGT
GCAGCTTGAAAAACCAGTGATCTTTGGAAGAAATGTACAACCAATATGTT
TACCGAAACAAGGAGAAAGGACAGATGTTGGAAAGAAATGCTACGTGACA
GGTTGGGGCAAGACAAGCAATCCTGGGATGGTGAACAACATCCTTCAACA
ACTTGCAATGACGGTACAAAACAAAACACGATGTTCAACAATGAACAGCA
AATATGCACCGTTGACTGGTCAAATGTTGTGTGCAGCCAATACTGAAGTG
GTAGAGAATCAATCAGTTTGTCATGGGGATTCCGGCAGTCCGTTTGTTTG
CCAAG Run BLAST on NCBI transcript from alignment at sc0000052:92114..104045- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005317 ID=TCONS_00005317|Name=TCONS_00005317|organism=Clytia hemisphaerica|type=transcript|length=11932bp|location=Sequence derived from alignment at sc0000052:92114..104045- (Clytia hemisphaerica)
ACAAAGACGTAGATGAAAATGAACAAACGATCCAAGTATCTAATTATATT
GTCCATGAAAATTACCAAAACCCGCGGTTGAGTAATGATCTAGCTCTCGT
GCAGCTTGAAAAACCAGTGATCTTTGGAAGAAATGTACAACCAATATGTT
TACCGAAACAAGGAGAAAGGACAGATGTTGGAAAGAAATGCTACGTGACA
GGTTGGTTAAAAAGTTACACGTGTTTTTATAAGAACAAACTATATAAGAA
CATAAGGCCTCGATGGCTAAAATGTTAAGAACAAGTTAAGAACATTTTAA
GGCTTTAAACTCAAAAAGTTAAGAACATCCGAAGGCTTCAAATATTTTGG
ATGTTGTTATAAAAAAACGTGTATGGCTGCATGGAGCAAAGTTTTGTACT
GGGCCAAGGCTAGTGGTCAAAGCAAGGATTTTCGTCAGATATGTAAAACG
GATTTTACACAGCCAATTAGCACATATTCTTGAAATTTTTGGTGAAAATG
GAAAAGCCTCTTTATAAAATTTTCCAAGACAGGAATCCGTCTACAGCGGA
AGATATTTTGAAAAGAGCTGTTAAAAATGAACAATAAGCAAAGCAAAAAC
CCAAACATCATTTGAATGTTGTGCCGCTTTGCCTGCATTTATTATATGAA
AAGTAACTTAAAATACAATCCCAAATCAAATCTCAGGTTGGGGCAAGACA
AGCAACCCAGGGATGGTGAACAACATTCTCCAACAACTTCCAATGACAGT
ACAAAACAAAACACGATGTTCAACAATGAACAGCAAATATGCACCGTTGA
CTGATCAAATGTTGTGTGCAGCCAATACTGAAGCCGTAGAGAATCAATCA
GGTATCGTAATGCTTTCAGCCACCCACTTCTCACAGACCCGGTAGGATTT
TTTCAGCCAGTGGGGATAAAAATAACGGACTAAAACTCGATGGGGATTGA
TATTCCTGTTTTTTATGGCTGGGGGTTTCAATTATTTAGTTTTCAAGTGC
AAGAAAATTCAGTGGGGATGAGATTCAAGAATCTCATAAAGAGAATGCCT
TTTAAAAGAACTCTCATCAATCAAAATTTTACTTTTGTCACTTTTCCTTC
TCTAGTTTGTCATGGAGATTCTGGCAGTCCGTTTGTTTGCCAAGAAAGCA
ATGGTTCATGGACATTACATGGTTCGGTGAGCTGGGGATCACCACAATGT
GATATCAAAGATGCTTTCACTGTCTTTGCAAGGATCAGTGAATTTAGAAA
CTGGATTGACCAAAATATAAAATAGAAATAACTGTTTTACTCGAAGATGA
TACTTTCAAAGAAAAAGAGTTCTAAAGTCTGAATCATTTTCTTCTTCATT
CCCTTTTGTTCTTGTACTTTTCTGTTAGTAAAGACTCAAACACTCAAGGG
GAAAACAAATTTGTTTGAATGATGGAAATTTCGAGTCATGGGGTAAGGTT
TATAAGGTATTTTTAACTAAAAGGACCGTAAAGCTTGTTCAAGTCAAGGA
GACATTTTGAGTTATGGGGTTCGAGTTAAAGGGGCTCCACTGAATTCAAA
TTTGATTATCTTTCCAACAAGCTCAAAACCGTAATCTAATTCGAATTCTA
TCAAAAATTACAACCGTTTTTGTCATAGCTGCAGATGATATTGAGAGAGA
CTGTAGTGTTTTTTAAATAACCTCGACACAGCTCCTTCTCATAGGCCCGG
TAGAATTTTTTCAGCCAGTGGGGGTGAAGGGGTAACGGACTGAAACTTTA
TGGATGGGGATTGAAATTTCATTGTTTTCAAGTCAGAAAATTCAGTAGGG
ATTGGAGAAAAGCATAATATTTTGCGGACAATAATTGGAGTATAATTTTC
CACTGGGGAAGAAATTTTGGTCAATTTTTTCAGGAAGGGGTTCCAGTGGG
TCTGTGATAAAGGGGTGTCTTGACTTACGACTGGTTATTTTTAACTTGTT
GAAAAAAAAACAAAAAACGAATACGATTCATCGGTTTCTAAAAGGTTTTC
GAAAGGTATTTAAGAGCTTACAGGACTCTCGTCCACTCGGCCTCCGTTGC
ATGCCAGACTACTGGTAGAGTTACGAGTTGTGAAAATTTCGTATTTCGTG
CCCATACAAGGAACCATTTGGGATCCTACCATAGATTTATAAAGCCCGAA
GGAAAACGAAGGAAAAGTGAATATCGGAAAAATTATTGTTACTATTGTTT
TCGAAAACCCGCGAAGCTTCTGATTGGCCAAGCGCTGAAAATTCTATATA
ATGTCACGTGACTTAGGTAGGTTTTCCTACCTTAACCACGGCACACTTTT
CAGCAAAAGTACGACATCTAGCCCTTCGGGCTTTATAAAGATATGGATCC
TATTGTTACACATGCGCGACAAAATAATTTTTAAGTCCGTCGCAACAGGT
TAAACTTCAAAGGGAGCTGAACACAGGGCTGCTCACAAATTTTGATCAAA
GTTGTGTGTGTAATCAGTTATATAGACTGACTGGTCACATTTCAAAAAAG
TTTTTCATTAATTTTCACGTGATCATTAATTTTCTTTCTGAAATGAAGGC
AAGCGGTTCTTTAAAATTAAATATTGAGCTACACTGAAAATTTAATATCT
ACCAAAACTTAATATTTACGTTTTGAAGAACGATACCATCCAATAGGGTA
TAGACTTTAAGAGCAGGTGCATGTTTGATATTACTTAGCGCAAATAAGAG
AAACAAGTCTCGTTAAATTAAAGTTGATGAAAAAAATAGTTTGAGTTTTA
GTCACACCGTAGCCTGCAGTTTGATATCAAAAATACCATTTTAAGATGAA
AACTGCAGCAATCATTGTGATTTTGGTCGCCCTCAATGTTGGTATGGATA
TTTTTTTGTCGTCAGACATTCATTCATTTTGATTTCAACATTTTCAAGGC
CTTTTTTACGAAGTTCAACGTGCTCGAGATTTCTTGTTATTAAGCAGGGA
TGAAATATTGAAAGTTTTCGAGAGTCGACGAATTGATACATTTGAATTAG
TTTTGTGATCAATATTTTTGTATTCTTTATTTTTTAAATATTTTTCTTTT
GTTACATTTCAGCAACAGCGACACATAAATCAGGTAAATTTGTTCATCAA
ACAAAAAAAGAAGCCAAATAACACGTCATACTTCATATTTTTGCCCTTTA
TATAAGCATCCAAATAATTATTTTCCCTCTTTGTTTAATCCTTTAAGTGC
CAATGTCAGTCGTATATATCAGACATGGGCTATGTATGTAGGAGGACAAA
GCCCTCCTGTAATGCCCAGTTTGAGTTAAAAATCATCATTTTTTTTCTAA
CTCGTAGGAATTGAATTGGGTTTCATGGTCAAGCAAAAAAATAAATAATC
AAAAGTGAGTCTTTTCAGCGAGATTTTAAGCCAAAAAGTAAAAAAAATGC
AAACATTTGACAAAAATCCATTTTTTTAAGATCTTGACCGTTTTTTGACC
ATTTTTGGAAACGAGTGATCCAAGAACCTCCATTGGCCATGATTCTTTGA
CCTTTGACCGTGGTACTTAAAGGGTTAATAGCAAGGAATCAGCCACTATA
GGCCATTGAGTCCTTGATCACGCTATCACCAATGCTGGACAAAAGGTTGT
AGACAAATGAAATTTCAGTGAAAAATGATGAGAAATAGAGCAAAAATGAC
TCTTCAATTGAGTTGCTTTTGAGGGAACCACAAGCAAAAAATCAGCGTTT
CGATACTGGTGTAAGCCAGTTAATCAATCCCTTGTGGTTAGGCTGCAGTG
GGTGACTTTGGAAAGCACCCAGAACCTCATGGGAACTTGTTTTTGATCGA
TATTGAAGTATTTTGCAAATATTGCAGAAGTCTATAAACCTTTTGTTCAT
GATTGACGCCAAAAATATTCTCTCATCACGCAATCACTATTGTCGCGGCG
CTCTTTAAGAGGGTGGCGCTGAATAGAGGAACTGCAGTACTCCATTTTAT
ATGTTATAGGATGTCGTGATTTAAGCTCGACCTGCTCGAAGTACAGCAAA
ACCAACTGTAGATCGAGCAAGTTTAACAAATATTGTAAAAAGTATTGTGG
ATTATGCTCGTCAGGTAATGTTTCAAAGCACTAATTTCTAATTTCATGAC
TGAATGTGGCTTACCATATAAACGGATTTACAAGACGGCTAGGGTGCTAC
TGTACAATGCGTTAACTTACGGATTCATGCTCCTTGTAGATACACTGCAT
GTTTTGTAGAGGTCTGTGATTCAGACTAGGTGTAAAACGCCATAATAATG
CTTTTATTCCCCTGCTTGACATTTACATGATTCGAATGTTTTAAAATTCA
AAATAAAAAAGATACGAAAAACTAGTGTTAAACATATGATCGCCCCCAAA
CCAGAAGAAAAACGGTCATAATCTAGGTCCTTTCATATTTTTTAAACCAA
AAAATAGAAGTTGAAGAGGAAACAACAACAATTTCACTTTAATCTTTACA
AGGAGATTTAAATCTAAAATTGTGCCCAATTCTTGAAAATCTTCCTCATG
GTAACAGTGTTAATGATAGGTTTTCGACCGGACCCGAAAACATGATTGCC
ACAGTACTTATTCAGAGATCGTAAAATTTAGTCGCATTGTTTCTACCAAA
TCTGTTTACTCTTTAGAATGTCGCGATTATAGAAAATATTGCTACAAGGT
CCCGAAATCGTCTTGTATAAAGAGTGTTTATAAAAAAAGATGTCCGAAAC
ATTGTGATGAGTGTCCGAAACCCACCAAAAGTATGACAACAAGAACGGTA
ACCACGGCAACAAGGACACCAAGGACCACAACAAGAGAAGGTTAGTTTTC
CTTACTTTTGGTTTTCCATCATTCTCTTGTTTCTCATCGAAGGTTCAATA
AGAATATTTTCGTTGATTGAAGGATACCAAGTGCAAATTACTACCTTATC
TGTGGAAAATTTCATCGTCTAAAAGTGATGAAAGAATTGCTCGGTTACCA
AATCTTTAGCCGACGAAAGTTTTTAGCCGACAAAAGAATCCGAGGTAATC
GATAAGGTATTATAATGAAATTCACAGATTTTAAGGACTGACGTTCCTTC
TGATAGTGAACTCGAAATCTCTGGCTTACCAGGCAATTAATCGTTTTGTT
GCTACAATCGGAACCGAAATATTTGGCACAAAAGGGGAATTCCCTCAAAA
CTATAAAACCGCAAGTGATTTTTAAGTGCTCTAAAGTACGGTTAGAAAGT
AGAGTTTTAAATCTGAGTTTTAACATTAGACTTAAGGCTCAGGAGGACCT
TATAGGATCCCATTATCTAAAAGCTCAAAAATGTTCCAATATGGCAGAGA
ACATATCCTGGCAGCCACTTTAACCCCTCCCAAATTGAAAAATTAACTGG
AACAAAGTGGATATACTGAAATTGCAATTCTCGCCCGAGCTTTAAATTCT
GGAAAACTTTAAAATACCCAAAATTGCCAATATATTTGGGCGCTGATTGT
AGACTAAGTGATATTCTTTAAAAAAGTATTATGATCTAGTGCCCAATCCC
CAATCAATCCTAGAACTTTTGTTTATTGTTTAGAATGTCGTGATTAAAAT
AAATTTTGTCCTTGGGTCCCAAAAGATTCATGCAAAAGGAGTATCCACCT
TAAGAAATGTCCTAAACATTGTGGCTTCTGCTCAGAGCTTACCACGCCAA
TGAATACTAAATCAACAACTACGACAACTTTTTTCACTAAAGCATCAACA
AGATATACAACCAGGAGCACAACACCGACAACAAAAGCTAAGACAACTAG
AAAACCTACAAAAGCAACAAAAACAAAGCTGCCAACAACAACCGCAACAC
CGACAACAAAACAAACGACACAAGGAAAAACTACAACAAAACCAACAAAG
ATATCTACAACAAGGACGCTTCACACAACAAAAACATTGACAACACAAAG
AGCAACATTCACAACAAAAGAAAAGACTACAAACTTACCAACAACACATC
GCCCATCCACCGCATCCACCACCAGAAGAACCACACTGGTACCTGCTACA
CCAGACAAAACAAACTCTCCACCACCTAAAGGATCTTGTGGATATTCTCA
AATCCCTCAATCAAGAATCATCGGTGGTAAAGATGCAAAACCTCACTCAT
GGCCCTGGCAAGTTGGAATTTACAGGTATGAAGCACAAATATCTGTAAAG
CCCAAAGGGCTAGATAGACAACTTTAAGCTTTTTCCAAAAAAATTTGACT
TTTTAAATTCCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGG
AGCGCAAGATCAAAAAAAGTAGGCGGCAAACGCTATTTCGCATCTCTCAA
ACCAGTAAAATTGCTTGTTGTTACGTGATTTCTTTGGTAGGAAATCCAAC
CAAAACTTGCTTCACTTTTCGATAAAAGCCGCGGATCTAGCCCTTCGTGC
GTTACAGATCTGTGATATGGAGCCTTCTTATTTTCGTGTAACCAGTCTGA
TTCGCAGTCCTTTGCAGTTTACTTTGCAATAAGAAACCTTTTCATTGGGA
AATTAATCGACCTTTTCATTAAGAACGTTACGAACATCACTTGCCTCGTT
TTGAAATTATTGCCATGGTGATTGACTCCCAGCGGATTTTATTAAAACTA
CTTCCTATTCATAAAAATTCATCTACTGTCTCAAGAGACTTAATCACCAT
GGTAATTGTTTGAATACGAGGCAAGTGATGTTCGTGATGTAATTTATGAG
GTCTATTGAGAACTTAACCTTCCCTTTAATCACTGAACATCAAGTAGAGA
GACATCAAGTGTCATATTTTATATAGTATGAAATCATTGGTACAACTCGG
CCGGGGATTGAACCTACAACCTTACGCATAGTAGCCGAATGTTCTACCTG
TGCACCACGGTCGCTTTAAATGATCTGTTGAGAAGAAACGTCTCCTTAAG
AACACCTTAAACATTCTTAAACAGAAATGGTAAATATGGTTGTGGAGGAA
CGCTTATCAACAGTCGTTGGATTGTGACCGCAGCACATTGTGTTTACAGA
AGACCTGTCAGAATTTTCACCGCAAAGTTAGGTATGAAATTCTCGAAAGC
GTTTTTGCAAGTAGTGGCAAAATGTAAGCTAGAGATGAATTTGCCACTAC
TGGCAAAAAAACAGAATGTTTACTTAGAAAACTTTTGCTTATTTTCAGCC
CTAATTTATGCTTATTTATATGCTTCGACTTCAATTTGTTGATTTTCTTT
TGGTTCATGAAAATTTCATTGATACGGCTCAAAGAATGAAGCAGCACTGC
CCTAAAATAAAAACATCTTTTCACATACTTTAATCGTTAGGAGACCACAA
CAGAGACATCGTTGAAGGAGAACAATCCATCCAAGTATCTAATTATATTG
TCAACGAAAATTACCAAAACACACGACTAAACAATGATCTAGCTCTCGTG
CAGCTTGAAAAACCAGTGATCTTTGGAAGAACTGTACAACCTATATATTT
ACCAGAACAAGGAGAAAGGACAGATGTTGGAAAGAAATGCTACGTGACAG
GTTTGTAACACCCAAAATAACAAACACTTTCAAGAAGGCTTGACTGACAG
ACAGCTACAAGTTATTCTGTTGAAGCTAAAAAGATCATAAATTTGGATTT
AATACAGGTTAAGTCGCGGTTTAACTTTTATATGATAAGCGCATCATTCT
AATGGCTGGGTGGTTGCCCTCCGCCAACTGAGTCTACTTTGCTCGTAGCC
GCTTGATGTCATGTTCATAATGGCCATCGCAACTCCTTGTCGACGCTGTA
ACTGGAAGCTGAGAGGAAAAATATTTTTTGCCTCCTTCTCTCCCTGCAGT
AATGGTTGTAGGCGATCCTCACTTATTTATGCTAATATTGTATTTATCGG
GACAAATTTCCCCTAAAACTTATTATTCGAGGATTAGCCATAATTTTACG
CTAAACCCATATCTACTGACTCACACTTTACTTTTCAGCCGTCTGACTAC
TTGATTGTTTATTTTTAATTCTAACTAAGTCATCGGCAAATTGAAAGTTA
AAGTCATAACTTTTGGAAATCCCTGTAGTGAATTACACTAAAGTCTATTC
ACGATAAGTTAAGATATTTATTCAATATAAAGTTATGATACAAAGTTAAT
AAGTGATTGACCCCAAAAAACAGCAAAAAACTGCAGAAAACAGCGTTTTT
AGACGTCAATCAGCTAATAACTTTGTTTGATATCTTTTGACTGAATGATT
ATTTTTGAGAAATTTTTTCACAGTGATGACGTTCGATGATCAAGGATTCA
CTTCAGTGAAAATGATAGTTATAGCACTTTTCTACAAGATCTTCATTTTT
TTCTTCTTCATTTTCGTCTTCATTTTTAGAATTTTTTTAAAGATTTTTTT
ATTTCAAATTGTTCCACTCACTAATATCTTTCCAATGATACCAAATTTAT
AAAAATTGAAGAATTCCTTCAAAAGTTATAGGTGAAAGAAAAAAGAGGGC
ACACTTATCGTGAATAGACTTTCATATATTGTTTAGAAAACCCATTCATA
ATAAAAGTCCATTGGAAACTTCGTAACTATATAGTGAATCCCTTGAGAAT
GGTTTTTACATGAGAGCAAAGCAGAGTGCACACCATTGAGTTTGAAGCCC
GAAGAGCTGGAGGCGAGACTTTAACACTTCTCAGGCAAGAGCAATTGAAG
CCACTTATTTCCCATCAAAACGCACAGAGAACGCGCTGTAATCATTACGA
CGGATTGTATCTAGCGGTTCCTTTGTTTTGGATGACTACATTTTTTGAAA
TCTAGCGATAGATTTTAGTTTCAGTCCCGCGTTTGTGTAAAATCTACGCG
CGGGCGTTCTGGATGGGAAATAGGTGGTTTCATTTCCCATCCAGGAGTCT
CGCCTCTAGCCCTTCGGGCTTGAAACTCAATAGTGCACACCTATAGTCAA
GGAACTTTTTTTCCTTTTCCCAAATCAAATCTCAGGTTGGGGCAAGACAA
GCAATCCTGGGATGGTGAACAACATCCTTCAACAACTTGCAATGACGGTA
CAAAACAAAACACGATGTTCAACAATGAACAGCAAATATGCACCGTTGAC
TGGTCAAATGTTGTGTGCAGCCAATACTGAAGTGGTAGAGAATCAATCAG
GTACAAGTCTTACTTCAGGCACCCAAATATCTCACAAAATCTTTTCAACA
TCTTCTCTGATGTTGAATACAACTACGGATCCTTAATGTATAGAAGTTTG
CATAGGACCGAAATACAAATACCTCCTTCGTCGATCTAGGTATGTGAAAA
CTACAATAACATCAGTGCCGTAGCAGCTGGGGGGGGGGGGGANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNACGTTTTTCAGAATTTAAAGTTCGGGCGAGAATTGCTA
TTTTAGCACTTCCACTTTCTTCCATTGAATATTTCGATTTTAGAGGGGTT
TGGTGGCTTCTGGGCTATATTCCAAGCCTCATTCGAGCAAATTTGAGCTT
TTAAATCCTGAGATCCTAAGCTCTTAAGTCTTAAGTCTCATGTTAAAACT
CAGAGTTAAAACTCTACTTTCCAACTGTAGTTTAAGGCGCTTAAAAATCA
ATTGTGGTGTTCAAAATTACAGCGGGAACTCCCCTTTGTCTCAAATATTT
CTTGAAGGATTGTAGGTCTGAAAACTGTGAAAATCAATTACACCCCTTTC
TCAGTGACCCGATGGCCTGTTTGGATAAAACGGGAGGAAGGTTAATATTT
AGTTAAGTGGGTGAAAATCTCTTTGATGTTTTCAATGTGATGAGATTCTA
GGGATTCTAGGGATTCTAGATTGCAGCGAATCATTCATTAGCCGTTAATG
TTTTTTGTGGGGTTTTAGTATAGTTTTCCAAAATAGCCATAGAGTTTTGG
AGCATTTTTTTCTAAAGGGAAGTGCGGGGGGAGGGTGGGTTCCTGTGTAT
CTGTGATGCAAAAGTGCATACAATCAGATTTTGAATCAATTACAAGACAA
TAACATTGTAAGCAATCAAACAACCTTAAAATTCTTTCTCTAGTTTGTCA
TGGGGATTCCGGCAGTCCGTTTGTTTGCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005317-exon-sc0000052-1575043694:103845..104045 | TCONS_00005317-exon-sc0000052-1575043694:103845..104045 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1575043694:94946..95110 | TCONS_00005317-exon-sc0000052-1575043694:94946..95110 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1575043694:92114..92152 | TCONS_00005317-exon-sc0000052-1575043694:92114..92152 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1510915933:103845..104045 | TCONS_00005317-exon-sc0000052-1510915933:103845..104045 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1510915933:94946..95110 | TCONS_00005317-exon-sc0000052-1510915933:94946..95110 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1510915933:92114..92152 | TCONS_00005317-exon-sc0000052-1510915933:92114..92152 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1491911889:103845..104045 | TCONS_00005317-exon-sc0000052-1491911889:103845..104045 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1491911889:94946..95110 | TCONS_00005317-exon-sc0000052-1491911889:94946..95110 | Clytia hemisphaerica | exon |
| TCONS_00005317-exon-sc0000052-1491911889:92114..92152 | TCONS_00005317-exon-sc0000052-1491911889:92114..92152 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000052 | supercontig | sc0000052:92114..104045 - |
Blast
BLAST of TCONS_00005317 vs. Swiss-Prot (Human)
Match: OVCH1 (Ovochymase-1 OS=Homo sapiens GN=OVCH1 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 4.552e-22 Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 3
Query: 12 DENEQTIQVSNYIVHENYQNPR-LSNDLALVQLEKPVIFGRNVQPICLPKQGERTDVGKKCYVTGWGKTSNPGMVNNILQQLAMTVQNKTRCSTM--NSKYAPLTGQMLCAANTEVVENQSVCHGDSGSPFVCQ 404
D+ EQ I VS I H Y + +S D+AL+ L+ V FG VQPICLP ++ + G C +GWGK S +N+LQ++ + + + C+T+ + PL MLCA + C GDSG P VC+
Sbjct: 113 DKQEQNIPVSKIITHPEYNSREYMSPDIALLYLKHKVKFGNAVQPICLPDSDDKVEPGILCLSSGWGKISKTSEYSNVLQEMELPIMDDRACNTVLKSMNLPPLGRTMLCAGFPD--WGMDACQGDSGGPLVCR 244 HSP 2 Score: 83.1889 bits (204), Expect = 1.098e-18 Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 3
Query: 12 DENEQTIQVSNYIVHENYQNPRLSNDLALVQLEKPVIFGRNVQPICLPKQGERTDVGKKCYVTGWGKTSNPGMVNNILQQLAMTVQNKTRCSTMNSKYAP--LTGQMLCAANTEVVENQSVCHGDSGSPFVCQ 404
+ EQ + + IVHE++ +D+AL+QL P+ + V+P+CLP E + C VTGWG S G + + LQQ+ + V + C P +T +M+CA E + C GDSG P VC+
Sbjct: 639 ESTEQVRRAKHIIVHEDFNTLSYDSDIALIQLSSPLEYNSVVRPVCLPHSAEPLFSSEICAVTGWGSISADGGLASRLQQIQVHVLEREVCEHTYYSAHPGGITEKMICAGFAASGE-KDFCQGDSGGPLVCR 770
The following BLAST results are available for this feature:
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