TCONS_00005238 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005238
Unique NameTCONS_00005238
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1385

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005238 ID=TCONS_00005238|Name=TCONS_00005238|organism=Clytia hemisphaerica|type=transcript|length=1385bp
TTGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCCTCATTACCA
TCCAAAAATATTGCTGACGTCATGCTtctcttaaaaaacaaacacaaaca
TCGAAAAATACATTTCCTTTTTGATGAAGTTCCGCAAGAGCTGTTCACAA
AGACCTACTCGGAAACACTACGTAGCCATTTGGAAAGTGAATTTCGAGAA
TCAGTGGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAAT
CGAGGAAGGCAAGATCACCAATTCACAGGAGATTGATTTAAAAAGCTCAG
gaaaCGTTTTGCTAACAAAAGACGAATCTAACAATGCCATAATCCAGGAA
ACTCAATCAAATGGAGATGACGAAAATAGGCCAGGTGGCTCTCAATCAAC
AACAAAAGATGAATTTCAGGTTAATGAGCGAAAAGAAGATCGAGAAGCAA
GCGAATCATTTGACACAACGAAGCTACGCGACCCCGAAAACGTTTTTAAG
TCGCAGTTACAGACGAATGAAAACGAAGAAGTCGTGAAAGAACTGTCCAC
TACATATACCTATATGAAAGGGAAATGTGGACATTCTTTCGAGAGCTTCT
TAAAACCACGAATCTTTTATTTCACCAAAGCTTCCACACCTTTATTTGCT
TGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAGAG
AAAGGAGGACGAAGTTGTGGTATTGTGCGAAGATATCTGTCAAGTAAAAA
TGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATACGCA
CCTTACCTTACCGGAGAATATCCTCACGACATCCACAAGATGAaggaaaa
attcgtcaaaagTTTGGACGAGATGGAGACAGTTCTGATATCCGATTATC
GGTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGATCCA
GAAAACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAACCAT
AACAAATCTTGATGTCATTTCAACAAAACCTTTTACACAAAGTCCTTCCA
CAAGTATCgaaagagcttttcaaaaatatgtcgACGGGACTTTAGCAATC
AAGACACACGTTGAATCAAGCAAAGACGCTGAAGATCTTCTGAAAGTACG
ATTTCAATACAACGAAAAGGACGGCtcaaaacaaacagaaattATTTCAC
AGAAATTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAGATGATTTT
AACCAAAATGAAGAGCTATGGCAAAACTATTTCAGgaTGGCGTTTACTCT
TTCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGACGGCAAACGTA
TGGAAAGTGTGAGCTTGAATGATGGAACTATGCTC
Run BLAST on NCBI

protein sequence of TCONS_00005238-protein

>TCONS_00005238-protein ID=TCONS_00005238-protein|Name=TCONS_00005238-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
GERRNVTDFYNCSSLPSKNIADVMLLLKNKHKHRKIHFLFDEVPQELFTK
TYSETLRSHLESEFRESVVVIALQSVQKSRKIIEEGKITNSQEIDLKSSG
NVLLTKDESNNAIIQETQSNGDDENRPGGSQSTTKDEFQVNERKEDREAS
ESFDTTKLRDPENVFKSQLQTNENEEVVKELSTTYTYMKGKCGHSFESFL
KPRIFYFTKASTPLFAWFLPILAATLQFCLNERKEDEVVVLCEDICQVKM
VQYALERIHKRPIAYAPYLTGEYPHDIHKMKEKFVKSLDEMETVLISDYR
SVRGLEMAHTIIFVDPENEANAHFLIEAITRTITNLDVISTKPFTQSPST
SIERAFQKYVDGTLAIKTHVESSKDAEDLLKVRFQYNEKDGSKQTEIISQ
KLTDFSFDVSQSLDDFNQNEELWQNYFRMAFTLSTSISSLGTNKWDGKRM
ESVSLNDGTML
Run BLAST on NCBI

transcript from alignment at sc0000051:785954..790525-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005238 ID=TCONS_00005238|Name=TCONS_00005238|organism=Clytia hemisphaerica|type=transcript|length=4572bp|location=Sequence derived from alignment at sc0000051:785954..790525- (Clytia hemisphaerica)
TTGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCCTCATTACCA
TCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAAACAAACACAAACA
TCGAAAAATACATTTCCTTTTTGATGAAGTTCCGCAAGAGCTGTTCACAA
AGACCTACTCGGAAACACTACGTAGCCATTTGGAAAGTGAATTTCGAGAA
TCAGTGGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAAT
CGAGGAAGGCAAGATCACCAATTCACAGGAGATTGATTTAAAAAGCTCAG
GCATGGAACTTTTTAAACTACCAACCACAATGAGGATGAGCAGTTGCTTA
CATAAATTGAAAGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCTGCTC
CTTAAACTTAGAAATTCGATCGAAAGGTATTACATACTATTTATGTAACA
TTCTTTTATAATCGTGTTCAATTGCAACAGTGTTCAAGTAGAATATACTC
ATTTCCATTTATGACCGAAATATTTTCTTACATTTTAATTTTTATTTTTC
AGGAAACGTTTTGCTAACAAAAGACGAATCTAACAATGCCATAATCCAGG
AAACTCAATCAAATGGAGATGACGAAAATAGGCCAGGTGGCTCTCAATCA
ACAACAAAAGATGAATTTCAGGTTAATGAGGTAATTTTGTTAATGAGTGT
ACTGTTTATAATTAGCTTACCATTCAAATTGAATAATGAAGCTATTTTCT
CTTTGTCAGAACCGATAATCTTTTTAGAAATTATTTTAACAGATTTTTTG
TTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTTCATATCAGACACATA
TTTTATATCCGGACAGTTTCTACCTATTGTTATATCATGCTGATATAAGC
AAAAAGATGTTCTTATTTTCCTCTTTCTTTGCTCGACATCCGTGTCAATC
CAATGTGAAAAAGCTTGTGAATTAAAATTGACGAGTAAGCAAAGGATATC
ACTCTTTATTTAAAAACAAAACCTTTAATTCTGTTTTTCCAGACTAGAAC
AGATTAACTTTTTGTGTTGGATATAACAACTTATTTTTGAAATTCCGTTC
AAATGATCTGATTCAGATGTAATTTGCTTCTCTATAACTTGTGAAAAAAA
CGTGCTCTCCTTGGCAACACACCCTGCTCATAGACCCGCTAGCAGGATCT
TTCAGGCAGTTGGGCTTAAATAAAGGACCAAAATTTAATTGGGAAGATTA
ATATATTCCATTTTTTTGAGCCAGAAAACTCAGTAAGGATGGAAAAAGTA
GCATAATTCTTTTTGGAGTATAATTTTCCACTGGGGACTATATTTTCATC
AGTTCTCTTTCAATATGAATGGGTTCTACTTGATCTGTGAGAAGTGGCTG
ATTGCCATCGATTTTAAAGCCCCAAAGAGGCTAGTTCTAAAATTCCTGGA
TGGGAAATGAAGCCACTATTTCCCAACCAAAACACGTAACCTGTGTGTTT
TTCAAATAAAATTTAAAAGTGCACGGCAAACTTAAGGCTTCACTTTTTCT
TGTTTTAAAAGGTAGAAGATTCTTCTCTAGCACCTTCGTACGATGACCCA
GGAAGGCTCAAAACACGCACTTCTAGTTTTCACACACTTCCAGTTCTTAT
AAAATTTGTGTACTAGAACTTTCTTAGGTAAATGGCCCAGAAGGCTCAAG
TGACACTGCGCACTTCTGACTTGTTATCACAGCGGGAAATTTCCAAGCGA
GCGGCCCGCGCAATGAAATTTTTTTTTGTCGTTAAAATGAATGTCGAGTT
ACGCAAAGTGAATCAAAATTTTCGAGTTGTTCATATCAAGAGTTACAGGT
TAAAATTTCCGATTTAAGTCCTGGTCAGCAAAATGTTCCCCTAGTGGCAA
AAATCTTGAAATTTTCGGGCTTAAATCGGGGAAGCAAAACGTGATAGAAT
ATCAACTTTGTTTTTTGCATCAACCTTTTCCACCCCTTACCTCAAAGTAG
AACAAATAGAAACGAAACCAATAGTTAGGCAAAGAAAAATAAAGCACCAA
AATCTAAGAGGTTCCGTACCATTTACTTCCTGGTATTTCTTCAGATTTGT
TTGCTACAACACCAAAAATTCCATAGATTTTTTATTCTTTCTAAGTGCTT
CTGGTGAGCATTTACGCGTCAAAATAATGTTGTTATATGTAAATCACAGA
CCAGATTTACAACTCGTCAAACCACAAATGATTTCGTTATTATCATCAGC
TCATTTATTACAACTTGGTATCTATTTTGCTTACCAGAACGGCTCTCTTT
CGAGGGGGGAATTTGCGTATCTAAATTATTTTTAAAAGTGTGCAGTGTCG
TCACAAAAAAACTCGGAAGTGCGCAGTGTCTCGTGAGCCTCCTGGGCCAT
GACCCTAGACAGTTCTAGCTCACAAATTTTATAAGAACTGGAAGTGCGTG
GTGAGCCTTAGGGGCCATCGAGGCTTCAAACTGAGTTCCACCACTTAAAT
TACCAGCTACAGAAGAAAAACAAGCCGTGGATTTTCTTAATTAAATTTTT
ACAATTAAACCTTACTTTTATGTTTTAACGAAAAATTTCAAATTACTTCC
TATTTATTAGCGAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACACAA
CGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGTTACAGACGAAT
GAAAACGAAGAAGTCGTGAAAGAACTGTCCACTACATATACCTATATGAA
AGGGAAATGTGGACATTCTTTCGAGAGCTTCTTAAAACCACGAATCTTTT
ATTTCACCAAAGCTTCCACACCTTTATTTGCTTGGTTCCTTCCGATACTA
GCTGCAACCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTGT
GGTATTGTGCGAAGATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGG
AAAGGATACACAAGCGTCCAATTGCATACGCACCTTACCTTACCGGAGAA
TATCCTCACGACATCCACAAGATGAAGGAAAAATTCGTCAAAAGTTTGGA
CGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGG
AAATGGCTCATACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCA
CATTTTCTCATCGAAGCAATCACACGAACCATAACAAATCTTGATGTCAT
TTCAACAAAACCTTTTACACAAAGTCCTTCCACAAGTATCGAAAGAGCTT
TTCAAAAATATGTCGACGGGACTTTAGCAATCAAGACACACGTTGAATCA
AGCAAAGACGCTGAAGATCTTCTGAAAGTACGATTTCAATACAACGAAAA
GGACGGCTCAAAACAAACAGAAATTATTTCACAGAAATTGACCGATTTCA
GTTTCGACGTTTCACAATCTCTAGATGATTTTAACCAAAATGAAGAGCTA
TGGCAAAACTATTTCAGGTATAATCTTTCTGTTGAAATTTTCAAGTATTA
ATGATCTTTATTATTGCAAAAAGCTCAATGAGAGGATATAAGTCATATTT
TCCAAAATTAGGTGCCCGCTAATCCTTAAACCAAATAAATTCCAGACAAA
AAAGAAATACATATTTTTTTTCCTTCAGGATGGCGTTTACTCTTTCAACT
TCCATTTCATCTTTGGGAACGTAAGTCAATACAGTTGATGTCCCCTGATT
CAGCATTGTCAATCAACTAACAGTCACTTGACAAATTCCCTTTAAATTTA
TCATAAAAGATACTTTTTTATCGGACATTCTATCGCTATCATCTCCCTGG
GGTTGGGGTAATTAAAATTCACGATTAAACGATTTGCGGTGCACGATTTC
CGATCCATAAATCATGCTGATTTATGCCTAATCATGCTAATCATGACAAA
ATGATTTGAAAACGGAGTTTAGTTCGGGGGGGGGTCGACATTCTTGAAAG
ATTCCCTATAAAGATAGACTGGGAATCCAGTCGTTTATAACGTTTTTGTG
GAAAGCGAGAAATTTTTATGTCGGGATATGGTTAAAATAAACGACTGGGC
TAAGGGGGTTTCCGTAGCTTACGGGAGTTCCAGCAGGGCCCGCAGATTTC
TGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATAAAGACGGAATGTTCT
ATTTCCTTGATTTTGCAATACTATATAAACTTCAAGTGAAGAAAAAAAAT
TACCCTCGTTCGCAATGGAATGTAATATTCCAATCTTCATAATTTTTGTT
TTTGCTGTTCTGAAAGGTAAAGCTTCTATGGATGATATATATTAATAATT
ACTCCTGCATATAGCAACAAATGGGACGGCAAACGTATGGAAAGTGTGAG
CTTGAATGATGGAACTATGCTC

Coding sequence (CDS) from alignment at sc0000051:785954..790525-

>TCONS_00005238 ID=TCONS_00005238|Name=TCONS_00005238|organism=Clytia hemisphaerica|type=CDS|length=6915bp|location=Sequence derived from alignment at sc0000051:785954..790525- (Clytia hemisphaerica)
CAACAAATGGGACGGCAAACGTATGGAAAGTGTGAGCTTGAATGATGGAA
CTATGCTCGATGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAAC
CGAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACACAACGAAGCTACG
CGACCCCGAAAACGTTTTTAAGTCGCAGTTACAGACGAATGAAAACGAAG
AAGTCGTGAAAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGT
GGACATTCTTTCGAGAGCTTCTTAAAACCACGAATCTTTTATTTCACCAA
AGCTTCCACACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCC
TCCAGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGC
GAAGATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACA
CAAGCGTCCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCACG
ACATCCACAAGATGAAGGAAAAATTCGTCAAAAGTTTGGACGAGATGGAG
ACAGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCTCA
TACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCA
TCGAAGCAATCACACGAACCATAACAAATCTTGATGTCATTTCAACAAAA
CCTTTTACACAAAGTCCTTCCACAAGTATCGAAAGAGCTTTTCAAAAATA
TGTCGACGGGACTTTAGCAATCAAGACACACGTTGAATCAAGCAAAGACG
CTGAAGATCTTCTGAAAGTACGATTTCAATACAACGAAAAGGACGGCTCA
AAACAAACAGAAATTATTTCACAGAAATTGACCGATTTCAGTTTCGACGT
TTCACAATCTCTAGATGATTTTAACCAAAATGAAGAGCTATGGCAAAACT
ATTTCAGGAAACGTTTTGCTAACAAAAGACGAATCTAACAATGCCATAAT
CCAGGAAACTCAATCAAATGGAGATGACGAAAATAGGCCAGGTGGCTCTC
AATCAACAACAAAAGATGAATTTCAGGTTAATGAGGGTGAAAGAAGGAAT
GTCACCGATTTTTACAACTGTTCCTCATTACCATCCAAAAATATTGCTGA
CGTCATGCTTCTCTTAAAAAACAAACACAAACATCGAAAAATACATTTCC
TTTTTGATGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACA
CTACGTAGCCATTTGGAAAGTGAATTTCGAGAATCAGTGGTCGTGATTGC
CCTCCAAAGTGTACAGAAATCTCGAAAAATAATCGAGGAAGGCAAGATCA
CCAATTCACAGGAGATTGATTTAAAAAGCTCAGCAACAAATGGGACGGCA
AACGTATGGAAAGTGTGAGCTTGAATGATGGAACTATGCTCGATGGCGTT
TACTCTTTCAACTTCCATTTCATCTTTGGGAACCGAAAAGAAGATCGAGA
AGCAAGCGAATCATTTGACACAACGAAGCTACGCGACCCCGAAAACGTTT
TTAAGTCGCAGTTACAGACGAATGAAAACGAAGAAGTCGTGAAAGAACTG
TCCACTACATATACCTATATGAAAGGGAAATGTGGACATTCTTTCGAGAG
CTTCTTAAAACCACGAATCTTTTATTTCACCAAAGCTTCCACACCTTTAT
TTGCTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAAT
GAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAAGATATCTGTCAAGT
AAAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCAT
ACGCACCTTACCTTACCGGAGAATATCCTCACGACATCCACAAGATGAAG
GAAAAATTCGTCAAAAGTTTGGACGAGATGGAGACAGTTCTGATATCCGA
TTATCGGTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGG
ATCCAGAAAACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGA
ACCATAACAAATCTTGATGTCATTTCAACAAAACCTTTTACACAAAGTCC
TTCCACAAGTATCGAAAGAGCTTTTCAAAAATATGTCGACGGGACTTTAG
CAATCAAGACACACGTTGAATCAAGCAAAGACGCTGAAGATCTTCTGAAA
GTACGATTTCAATACAACGAAAAGGACGGCTCAAAACAAACAGAAATTAT
TTCACAGAAATTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAGATG
ATTTTAACCAAAATGAAGAGCTATGGCAAAACTATTTCAGGAAACGTTTT
GCTAACAAAAGACGAATCTAACAATGCCATAATCCAGGAAACTCAATCAA
ATGGAGATGACGAAAATAGGCCAGGTGGCTCTCAATCAACAACAAAAGAT
GAATTTCAGGTTAATGAGGGTGAAAGAAGGAATGTCACCGATTTTTACAA
CTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAA
AAAACAAACACAAACATCGAAAAATACATTTCCTTTTTGATGAAGTTCCG
CAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAGCCATTTGGA
AAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAAGTGTACAGA
AATCTCGAAAAATAATCGAGGAAGGCAAGATCACCAATTCACAGGAGATT
GATTTAAAAAGCTCAGCAACAAATGGGACGGCAAACGTATGGAAAGTGTG
AGCTTGAATGATGGAACTATGCTCGATGGCGTTTACTCTTTCAACTTCCA
TTTCATCTTTGGGAACCGAAAAGAAGATCGAGAAGCAAGCGAATCATTTG
ACACAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGTTACAG
ACGAATGAAAACGAAGAAGTCGTGAAAGAACTGTCCACTACATATACCTA
TATGAAAGGGAAATGTGGACATTCTTTCGAGAGCTTCTTAAAACCACGAA
TCTTTTATTTCACCAAAGCTTCCACACCTTTATTTGCTTGGTTCCTTCCG
ATACTAGCTGCAACCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGACGA
AGTTGTGGTATTGTGCGAAGATATCTGTCAAGTAAAAATGGTTCAGTATG
CCCTGGAAAGGATACACAAGCGTCCAATTGCATACGCACCTTACCTTACC
GGAGAATATCCTCACGACATCCACAAGATGAAGGAAAAATTCGTCAAAAG
TTTGGACGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGTG
GATTGGAAATGGCTCATACAATCATCTTTGTGGATCCAGAAAACGAGGCC
AACGCACATTTTCTCATCGAAGCAATCACACGAACCATAACAAATCTTGA
TGTCATTTCAACAAAACCTTTTACACAAAGTCCTTCCACAAGTATCGAAA
GAGCTTTTCAAAAATATGTCGACGGGACTTTAGCAATCAAGACACACGTT
GAATCAAGCAAAGACGCTGAAGATCTTCTGAAAGTACGATTTCAATACAA
CGAAAAGGACGGCTCAAAACAAACAGAAATTATTTCACAGAAATTGACCG
ATTTCAGTTTCGACGTTTCACAATCTCTAGATGATTTTAACCAAAATGAA
GAGCTATGGCAAAACTATTTCAGGAAACGTTTTGCTAACAAAAGACGAAT
CTAACAATGCCATAATCCAGGAAACTCAATCAAATGGAGATGACGAAAAT
AGGCCAGGTGGCTCTCAATCAACAACAAAAGATGAATTTCAGGTTAATGA
GGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCCTCATTACCAT
CCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAAACAAACACAAACAT
CGAAAAATACATTTCCTTTTTGATGAAGTTCCGCAAGAGCTGTTCACAAA
GACCTACTCGGAAACACTACGTAGCCATTTGGAAAGTGAATTTCGAGAAT
CAGTGGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAATC
GAGGAAGGCAAGATCACCAATTCACAGGAGATTGATTTAAAAAGCTCAGC
AACAAATGGGACGGCAAACGTATGGAAAGTGTGAGCTTGAATGATGGAAC
TATGCTCGATGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACC
GAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACACAACGAAGCTACGC
GACCCCGAAAACGTTTTTAAGTCGCAGTTACAGACGAATGAAAACGAAGA
AGTCGTGAAAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGTG
GACATTCTTTCGAGAGCTTCTTAAAACCACGAATCTTTTATTTCACCAAA
GCTTCCACACCTTTATTTGCTTGGTTCCTTCCGATACTAGCTGCAACCCT
CCAGTTCTGTTTGAATGAGAGAAAGGAGGACGAAGTTGTGGTATTGTGCG
AAGATATCTGTCAAGTAAAAATGGTTCAGTATGCCCTGGAAAGGATACAC
AAGCGTCCAATTGCATACGCACCTTACCTTACCGGAGAATATCCTCACGA
CATCCACAAGATGAAGGAAAAATTCGTCAAAAGTTTGGACGAGATGGAGA
CAGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCTCAT
ACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCAT
CGAAGCAATCACACGAACCATAACAAATCTTGATGTCATTTCAACAAAAC
CTTTTACACAAAGTCCTTCCACAAGTATCGAAAGAGCTTTTCAAAAATAT
GTCGACGGGACTTTAGCAATCAAGACACACGTTGAATCAAGCAAAGACGC
TGAAGATCTTCTGAAAGTACGATTTCAATACAACGAAAAGGACGGCTCAA
AACAAACAGAAATTATTTCACAGAAATTGACCGATTTCAGTTTCGACGTT
TCACAATCTCTAGATGATTTTAACCAAAATGAAGAGCTATGGCAAAACTA
TTTCAGGAAACGTTTTGCTAACAAAAGACGAATCTAACAATGCCATAATC
CAGGAAACTCAATCAAATGGAGATGACGAAAATAGGCCAGGTGGCTCTCA
ATCAACAACAAAAGATGAATTTCAGGTTAATGAGGGTGAAAGAAGGAATG
TCACCGATTTTTACAACTGTTCCTCATTACCATCCAAAAATATTGCTGAC
GTCATGCTTCTCTTAAAAAACAAACACAAACATCGAAAAATACATTTCCT
TTTTGATGAAGTTCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACAC
TACGTAGCCATTTGGAAAGTGAATTTCGAGAATCAGTGGTCGTGATTGCC
CTCCAAAGTGTACAGAAATCTCGAAAAATAATCGAGGAAGGCAAGATCAC
CAATTCACAGGAGATTGATTTAAAAAGCTCAGCAACAAATGGGACGGCAA
ACGTATGGAAAGTGTGAGCTTGAATGATGGAACTATGCTCGATGGCGTTT
ACTCTTTCAACTTCCATTTCATCTTTGGGAACCGAAAAGAAGATCGAGAA
GCAAGCGAATCATTTGACACAACGAAGCTACGCGACCCCGAAAACGTTTT
TAAGTCGCAGTTACAGACGAATGAAAACGAAGAAGTCGTGAAAGAACTGT
CCACTACATATACCTATATGAAAGGGAAATGTGGACATTCTTTCGAGAGC
TTCTTAAAACCACGAATCTTTTATTTCACCAAAGCTTCCACACCTTTATT
TGCTTGGTTCCTTCCGATACTAGCTGCAACCCTCCAGTTCTGTTTGAATG
AGAGAAAGGAGGACGAAGTTGTGGTATTGTGCGAAGATATCTGTCAAGTA
AAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATA
CGCACCTTACCTTACCGGAGAATATCCTCACGACATCCACAAGATGAAGG
AAAAATTCGTCAAAAGTTTGGACGAGATGGAGACAGTTCTGATATCCGAT
TATCGGTCTGTTCGTGGATTGGAAATGGCTCATACAATCATCTTTGTGGA
TCCAGAAAACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAA
CCATAACAAATCTTGATGTCATTTCAACAAAACCTTTTACACAAAGTCCT
TCCACAAGTATCGAAAGAGCTTTTCAAAAATATGTCGACGGGACTTTAGC
AATCAAGACACACGTTGAATCAAGCAAAGACGCTGAAGATCTTCTGAAAG
TACGATTTCAATACAACGAAAAGGACGGCTCAAAACAAACAGAAATTATT
TCACAGAAATTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAGATGA
TTTTAACCAAAATGAAGAGCTATGGCAAAACTATTTCAGGAAACGTTTTG
CTAACAAAAGACGAATCTAACAATGCCATAATCCAGGAAACTCAATCAAA
TGGAGATGACGAAAATAGGCCAGGTGGCTCTCAATCAACAACAAAAGATG
AATTTCAGGTTAATGAGGGTGAAAGAAGGAATGTCACCGATTTTTACAAC
TGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAA
AAACAAACACAAACATCGAAAAATACATTTCCTTTTTGATGAAGTTCCGC
AAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAGCCATTTGGAA
AGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAAGTGTACAGAA
ATCTCGAAAAATAATCGAGGAAGGCAAGATCACCAATTCACAGGAGATTG
ATTTAAAAAGCTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002979XLOC_002979Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005238-proteinTCONS_00005238-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005238-exon-sc0000051-1575043694:790226..790525TCONS_00005238-exon-sc0000051-1575043694:790226..790525Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1575043694:789846..789973TCONS_00005238-exon-sc0000051-1575043694:789846..789973Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1575043694:787059..787915TCONS_00005238-exon-sc0000051-1575043694:787059..787915Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1575043694:786856..786897TCONS_00005238-exon-sc0000051-1575043694:786856..786897Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1575043694:785954..786011TCONS_00005238-exon-sc0000051-1575043694:785954..786011Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1510915933:790226..790525TCONS_00005238-exon-sc0000051-1510915933:790226..790525Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1510915933:789846..789973TCONS_00005238-exon-sc0000051-1510915933:789846..789973Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1510915933:787059..787915TCONS_00005238-exon-sc0000051-1510915933:787059..787915Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1510915933:786856..786897TCONS_00005238-exon-sc0000051-1510915933:786856..786897Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1510915933:785954..786011TCONS_00005238-exon-sc0000051-1510915933:785954..786011Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1491911889:790226..790525TCONS_00005238-exon-sc0000051-1491911889:790226..790525Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1491911889:789846..789973TCONS_00005238-exon-sc0000051-1491911889:789846..789973Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1491911889:787059..787915TCONS_00005238-exon-sc0000051-1491911889:787059..787915Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1491911889:786856..786897TCONS_00005238-exon-sc0000051-1491911889:786856..786897Clytia hemisphaericaexon
TCONS_00005238-exon-sc0000051-1491911889:785954..786011TCONS_00005238-exon-sc0000051-1491911889:785954..786011Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:785954..790525 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.482088	0.442071	0.190914	0.073701	2.15614	1.70004	2.27438	2.95996	2.32652	1.27771	3.06825	1.94948	6.14208	4.10392	2.94112	4.86389	3.76369	2.69688	10.3923	5.42653	2.85077	2.4264	2.15576	1.88208	0.538373	1.93385	5.83807	5.68985	3.71015	3.51458
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005238 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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