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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005212 ID=TCONS_00005212|Name=TCONS_00005212|organism=Clytia hemisphaerica|type=transcript|length=146bp
GAAAGTGTTTCTTATCGAGCGACTGGATTTCAAAATAATGAAGTTACTGA
CAGTGCATTGATTCAACTGGACAAATTAGGGTTATCCACAACAACTCAAA
CTAAACCAACCGCATGCCCAAACACGAAGCAAGCTTTAGAATCAGG Run BLAST on NCBI transcript from alignment at sc0000051:445579..449069- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005212 ID=TCONS_00005212|Name=TCONS_00005212|organism=Clytia hemisphaerica|type=transcript|length=3491bp|location=Sequence derived from alignment at sc0000051:445579..449069- (Clytia hemisphaerica)
GAAAGTGTTTCTTATCGAGCGACTGGATTTCAAAATAATGAAGTTACTGA
CAGTGCATTGATTCAACTGGACAAATGTAAGTTCCACTGTTTTGAAAATC
TTATAAACCATTATGTGCTCCTCATAGTGAGTGGTCAGTCTTGCTCTTTG
TAAAAATTGACTTTGACGGCTTTTTCTATCACAGCTATAGATAACTCCTA
ATAAAAGAGTTTGAATGGGGGGAGGGTGATAAAACTGTACTTCAAATAAA
TGTGTATATCATTTTTAAACAACATTGAGTGCCTATAAAGGTCAAAGTCC
TTTTCCCTTTCATTTTTTTTAAAGTCGATATTTCGAATGTCTGATTTATC
ATCTATCAGTGAAGTTTATTATATATATGTTTTTTTCTGTGCAGATGACA
TTTCGAATGTAATATTCATTCAAGACGGCCCATGTCCAATTTTGACATGG
AATGCTGATGACCATGGATTATGTGAAGTGGATTTGTTTCTGTCTTTTGC
ACAGAAAAACAGCATCCCGAGAAATATTATTTTTTTTTTTTTTTTTTTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTGGGTCTGAGGAATTGGAGAATTGCTT
GCTTAAAAGACTTAATAGTTGGAAGATTCCGTATATGATCTCCGAGGTTA
TTCCATTCATTTATGCAAAAAGGAATTATTGTTCCCGTTGGCAACCAAAC
TTTTCAAAATTGCTATTACACTACAAATGCATCGATGGATGGTGTAAGCT
ATCAGACAAATGTCTACCTGAAAACATTAAACGGTAATAGAACTCAAACA
AGCTATAATGGGCAATTGACAACTGTCGGGCTCATGACAACAACAACAAC
AACAACAACCACGACCACACCGACTACAACGGGTACCAATCATTTCATTT
GCATGAATAACTCTTATTAATGTGTCTAAATTCGTTTTGTAGTACTAATG
ATAAGTACTACTAATGGTAAGTGTTTCCAATTTTCAATTGATATCTATTG
ATGTTTCTCAGGTAAAACAGAAGAAATGAAGCGACTGCTTTTAAGGGCTC
TGACCATAGTCAGAAAATTAGGTTTTAAGTGATTTGAAGAAATAACTTCT
GTTTTGGATTCCTTAATACTCTTAACAAAAAATTGCCTTTATACAAATTT
AATCACAAAAAGACGTTATAAACTTTAAAACGACGTTAGTAAAACTATTA
CAAAAGTGCTAAAAAAATATGCTGACAATAGGGTCTTCAAAGTTGCAATA
CTCTTCTTTGCAAAAGTCTTCATTTTCTTCTTCATTAAACTTTTTCAGAT
TCAGAAATAATAGCCCTAACAGAATATGTATAACATGTCATAGTTTTGTT
GGCTATGTGTTCTGAGAGCATATTTTAGCTAGAAATTTGATCTGTTCTGA
TCAGATCTTCGAAATTAATCAGCTAGTAACAATGATGTGTTCTGACGAGA
CAGAGGTATAATCAAGGGCATCTAAGGTGTTCTTGTTGCCTAGTAACCCT
AGAAAGCTTCAGAACACATCATTTAAGGAGACAGGGGTATAATCAAGGGA
TAATTGATGTAATCTTGTGCTTAGCAACCCTAGAAATTTTCAGAACACGT
CTTTCGTGGAGAAAAACAAATATACTATATTACAAGTTTATCTTGGCAAA
CTGTTTTTCTTAGATTTCAGAACACATCAATCCATAAAGTAGTCAGGCAA
ATAGGGCGATAAAGGTTTCCTAGAAATCAGAACACATCATTTGTATAGAA
AATTAAAAGGTCATAACATTTGGTCTCCTAGAAGAAAAGAACACGTATTT
CTAAAAAATCTCTCCGCTAGCTGCTTCTGAATACAGTATTTCACAGAGCC
ATTAAGGGCTCTGACCATAGTGAATATTTAATATTTGCCACGTACAAAAT
ATGAATTTCTACTTGATGTAGCCCACAAAAATGTGGCACGTTATACATTT
TCTGTTAGGCCAATGATCCTTGAGTCTGAAAATTTAAGAATTGCAATGAT
AGAATTTGATGAAGAAGAAAATGAAGACTTTCACGAAGAAGAGTATTTCA
ACTTTGAAAAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAATTTTTG
TTCGGTAGATGGTGTATCTTTTATCGAACTAAAATAAACTTTTCGGAAAA
TTTTTCTGAAAGCTTATTTGCTTCAAAATTTTGAAAATAGTGCTTTTTGA
CCAATTTTCCATCCCAATTTTTCATAGAAAAACAGCCATAATTTTTGATG
TATTAACTTAGAAAATTTTTCCGAAAAATTTAAAACAGTTTAATTCTTTG
CGGACAGTTTGAAATAACTTCGAAACAAAAAAGTTAATTACCCATTAAAG
CTTAGCACTTTTTATAAAAGAAGGTGATGCAACCTATTATTAACGTCTTT
TTAAAGTTCATAACGTCATTTTTGCAATTAAATTCTTAATTACTCTTAAG
GGATTTGATTAAAAAGCAATTTATAAAGGCAAATCCTTCTTAAAAGTTTT
AAAGAACCTAAAACATAACTTTATGTTCAAATTCTAAAATCGATTTTCCG
ACTATGGTCGGAACCTTGACCTAAAAAATCTAGTCTGCAAAAAAGTGAAG
TTGTCATGCCCCCGATGACAGGACCCATGTTTAGTGCCATAAAATATTAT
AAAAACCGTTTCTTTCACCAGTAGGGTTATCCACAACAACTCAAACTAAA
CCAACCGCATGCCCAAACACGAAGCAAGCTTTAGAATCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005212-exon-sc0000051-1575043694:448994..449069 | TCONS_00005212-exon-sc0000051-1575043694:448994..449069 | Clytia hemisphaerica | exon |
| TCONS_00005212-exon-sc0000051-1575043694:445579..445648 | TCONS_00005212-exon-sc0000051-1575043694:445579..445648 | Clytia hemisphaerica | exon |
| TCONS_00005212-exon-sc0000051-1510915933:448994..449069 | TCONS_00005212-exon-sc0000051-1510915933:448994..449069 | Clytia hemisphaerica | exon |
| TCONS_00005212-exon-sc0000051-1510915933:445579..445648 | TCONS_00005212-exon-sc0000051-1510915933:445579..445648 | Clytia hemisphaerica | exon |
| TCONS_00005212-exon-sc0000051-1491911889:448994..449069 | TCONS_00005212-exon-sc0000051-1491911889:448994..449069 | Clytia hemisphaerica | exon |
| TCONS_00005212-exon-sc0000051-1491911889:445579..445648 | TCONS_00005212-exon-sc0000051-1491911889:445579..445648 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051 | supercontig | sc0000051:445579..449069 - |
Blast
The following BLAST results are available for this feature:
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