TCONS_00005198 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005198
Unique NameTCONS_00005198
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1093

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005198 ID=TCONS_00005198|Name=TCONS_00005198|organism=Clytia hemisphaerica|type=transcript|length=1093bp
CCGCGcttcaaatttcatgttttatcaTTGtTTAGAATGAAAAGAATTGA
ATAGCGGGATGGTGACCATCAACAATCAACTGATTTTAGATGAAGAGTAT
GATGAAAATTACATACCAACTGAAGAAGAAATATTTGAATATGCCCGGGT
CATTGATATTGACCCTGAGCGGGAACCAGAGTTGATGTACATTGCAAGGC
AAGGTATTGTTGCGCCTCTGCCTGCAGATTGGAAACCATgCCAAGACCCT
AGTGGAGAGATCTACTACTTCAACTTTTCATCTGGTGACAGTGTATGGGA
TCATCCTTGTGATGAACACTTTCGTGAAATGGTTGCCAAAGAACGTGACa
tgttaaaaaataagaaacaaagCTCAAAGAAACAAGGAAAGGAaccaaaa
aagaacaaagacaAAAAAGCTAAGAAAGATGCAAAAAATTCTGTGGTGAC
TTCAACACCCACACTGGGTCAATTAAAACCAATTGGAGGAAAGCTGGATG
GTTTATCTTCTGGCAATTTAGCTCCTGTTAAAAGTGCAGCTTCCAAACAA
CTTGGTCCTTTGACTGGATTGGATAAACCAAAAACATTGAGCACCGCAGT
ATCAAcatcaaacaagaaaaacaatgataactTTCAAATGTCAAGAGGAA
CTGGAGAAAAAGTGAATTTCCTCGAACAACTTTCTGATATGAGTGAGTAT
TCAGATGGCAAACCAAAATTTACTTTAGATGTTGATGATAAATATGATAT
TGCCAACCTTGGCTTTGAGGACTCGGATGGAATCAGTGCAGACCAACCAC
CTGACTATTTGGATGTCAAATCTGACGAAAGTCGTGGcgatgaagatgat
gatgaaCTTgacTTTGGTATCAGTGCAGGGTTAGCAGCCCGTCTTGATGG
GATGAGTATTGAGAACCTTGGTGGGTTCAATTCTTATCAAGAAGGGAGTG
ACGAAAGTGAGTTTGACATCAAACAATCAAGTCGTGAAGATATCAACATG
TTAAATATCTCTCAGCCCACCATCAACACATCTTTTGATCAAATGAAAGG
AAGCAGTATTGATGTAGATGACGGCAGAAAACAAAGAGCTGAT
Run BLAST on NCBI

transcript from alignment at sc0000051:334767..350965-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005198 ID=TCONS_00005198|Name=TCONS_00005198|organism=Clytia hemisphaerica|type=transcript|length=16199bp|location=Sequence derived from alignment at sc0000051:334767..350965- (Clytia hemisphaerica)
CCGCGCTTCAAATTTCATGTTTTATCATTGGTAAGTATGTTGTTTTCAAA
TAACTCCAGAGTGATGTATTTTGCTTGCTCATCAATTTTAATTTACAAGC
ACTTTTCCATTGAATTGACACAGCCATCCACACCACTAAATCCAATTCTT
CCATCCGAATTCAGTTTATAGGCCATTCATAAAAAATTGTTTGGTTCCTG
TCATTCAATTTCGAAAAAGTGTGTCTGTGGGTTAGTGGTAAAAAAATTTG
TTTTAAAAATACCAGGCATGATTATACGAATCGTCCTCATCGGACATCTT
TGTCTTGTTTTTAAAAGAATATGCCGTCAACTGCTCTAAAGGGGCGACTC
ACATATCGATTTTTCCCACGCTTAACGTCATTCCGACGCTATTAGAGTCC
CCTGCCCAGTTGGCGACCGGTCTAGTTCGCGACCGAACGTCTTTGAACCC
AGAAAAGTAATGCAAAAACAAACCTCTTGAGAATTTCTTTTGGTAGTAAT
CTGCCTTGACCTATTTCCCGTACCACGTGCGTTTGGTTTGGGAACGCGAA
ACACGAACGCAAACTACCCATGTCTAAACTTTTCAATATATCTCCAGAAC
TAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCAATCAGATCGCGCGATTTCACTTTCGTTTTCTCTA
GTCCAATAAGACTGCGGGATTTGAGTCATGTGACTTATCTATTAAAAAAC
CCGCGCGAAATACAGGGGTTACAAATAGAAATACAGGGGGTCACACTACT
GGCTACAGGAACTGAAAGCAAGCAATTAAGGCCAATATTTTTGGTTTTTC
TGAAGGACAAAAGGTATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTGATGCAATCAGCTTCGAAATTTG
ACGTCCAGTCTGCGACCGACCAAACTCAAAAAATGAAAAAGAAGACTCTA
CATTGCGATCAAAACATTCCAGACGTGAAGAGAAAAAAACAGACATAAAA
AATTCCCGCGTTTTTATCAAATGAAGTCTCTCCATAGACCGCCACTTTCA
AAACAAAACAAAAACAAACTTTAGAAAAAAATGGCGACTTGAAGAAAAAT
TCTGAAAAAACATGCCAAAGGGAAATGTAAGTAAGCTATTTTAAAACAAA
AGAACGAGTGTAAATAAATGTAATAGGGAAAGCTTATGAGTTTTTTTATC
ATCCTGATCAATTAATACGACCTTACCTGTAAGTAGAGCACTGATTTTTT
CCTTCTTGCGATCGGTCGCAGACTGGTACGTCGGTCGGGAACTGGGCACT
AGTACCGCTCGCTTCGAAAGTTATTTATTCTAAGAAGATCGCCTCAAATA
AAAAATCAAAACAAACACGAAGAGCATGTTAAAAGTTGTCTAACCGTTGG
TTGAAAGGATTTTCAAAAAAGTAAAAAGTAAGTGAAAAATTTGAATCAAA
AAAATTTTGGTCGCCAACTGGGCAGGGTACTCTATCCAGACCCGATCAAT
GGAACTTGTCGAACTAATCGAACAATCGAACTAATTGAACTTCATCGAAC
GATTAAAGTTCGATTAAACAAATTAATCGAACTATAAGATTTTTTAAAAG
ATTGTGAGTGTTCGATTAAGTTCGATCAATGGGTTTCGGTTCGATCAGTT
CGATAAACCAATTTTGTTCGACAAGTTTGTGCTGCTCCGCCACCGTATAT
TAGCTTCTTTTCAAAGCCAATTTCGGAATGTAAATCGGGAAATTACTTCC
GATAACGGATTACACACTTTTTCTGTATCCTTTTAGCGCCAGAAGAAGCG
GTTTGTTGGGGTGGGCGTAGTATTCCGCCACTCGGCCGCACGCGTAATCG
CAACAGAGGGGCTACAGACTTTTTTTCCGGATAGACAAATATCCGGGTAC
AATAAACATCAAGCTGTTAAGTCCAGGAACTGTCGAAATTGGCAATCGCG
TGCCAGGACAAAGTTTTTGCAAGCGAGGGAAGATATGAGGATTTTAATAT
CATCGAACTAATCGAACTTTTTTGTCTTCCCGCTAGAGAATTATATAATG
TTATCTCCACAATATGACAAAATTAAATTCACACGGGGTAAAGACTACTA
GAGGGCCGTTCAGGTTGTTAACAATCAAAAAAAGCCAAGGGCCGTTTGTT
TTGATATCAACTTCGAAAATTTTTGTTCTCTGCTCAAGTGGCAGGAAAAA
TAATGACAACTTTTCGAGAAAATGGCAAATAATGACAACTTGATGCAGCA
GGTTTTTGAACACGCGGGTGGCTTACAGTAAACATAACATTAAATTCCAT
CGGCCTAAGAAAATCTACCAGAGATATCAATTTTCGAGGCCCAACAGATG
TTCAAAATTTCCATTATAACTTTCATACTTATTATTTTTCGGTTAGCAGC
CTCTTCATTTGTCAAGATTCAACAAAGCATCCTCACGTCAAATTTGTCTC
ATTTTCACGACATAGAGTATATGACTTAAACCGGTATAATAGTAAAATGC
CGGAGATGCAAAAATAATAGGAAAAAATTATAATCTGGATATGAGCCTAC
AAAAGATCAAAACAATAAAGAAAAGTGAGTGGAAAAGAAAAGTGAAAGAT
GGAATCAAAAATGACATTGCAGCACAGTGGCAGGAGAAGACCAACAGCAT
GAAAAAACTAAGGCACCTTAAGGAAAACAAACATGAAGAAAAAGACTATC
TGAAAGAGACCACAGCAGCAGAAGCAGCAGACCTGCTACGAATCAGGTTG
GAAATGTACGATATTGGAAACAACCAAGGAAGAGCAAGGAAATGTACTTG
TGGTCACCCTGAAGAGCTGGAGCATATTGTAATGTGTCAAAAATTCAGAG
AAAGATACACAGACGCTGAGGAAAGAGACATGACAAAAGATGATAAGAGA
GTGCTCACCAAGGTCAAGGAGTGGATTAAGGGATATCTGGTCTGGAGAAA
AAGCCATGAGGAAAAAGAATAAAGATACAAAGGAAAAAACCAATCCCGGC
ATCAGTCAATGATGCATGGTCGAAAGAACATAATGGGAAACTAAAGATTA
AAGATTAAAGATGCTCATTATATGTTAAAAAAGTTTGGGGATTTTTTTCC
CGCGTCATATAAACTTATGCGGGTCTGAGATGGAACCGATCTGTGTAAAA
GTCATATACCAAAACCACTACTCGAAAAACAAGCGAAATGTACCAAGCAG
AATGGGGAAGCAACTTCTCTGGCAGTGGAACATCAATACCCAATGGTGAA
AGAAAAAAAAGGTTTTCATCGATTTTCGGTATATTTTCTTAAATATGACG
ATAAGAGTAGGGGGTGGGTGGTTTTTTTTATTAGTGTCAGAACAACGCTA
AGCATGGGAAAAATGAATATGTGAGTGGCCCCTAACTTGGGACTATCTGA
CAAAACATGGGACGGCAATTCGGCCACCATTTCACCAAACCTCCAAAGTC
ATTTAATTTGAGTAAATGAACGGCGTATTAAAAAATACACGATTAGTAGG
CTTTTAAATTGAAATATGAAAAAATCTGTAAGTGTAGTGGTACACATATG
CGCAAGTGTCTGTGCACTCTAAGAAGAAGGAAGAAGTATGATTGATAAAC
TTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAAAAGTAAG
TGAAAATACAGACCAGATATCAACCAGTCCCATGTTTCGACCAATCGTCC
CAAGTTAGAGCAGTTGACAGTAGACCTTTTCATAAATTACGTCAGAAACA
TCATTTGCCTTGTATTCAAACAATTACCATGGTGATTATAAATGTCCATG
TACATTAAATGATTTTTTTATAAATAGAGAGTAGTTTTAATAAAATCCGC
AGGGAGTTAATCACCTTGGCAATAATTTCAAAATGAGGCAAGTGATGTTT
GTGACGTCATTTATGAAAAGGTCTATGAGACGACTCATTCTTTTAAAAAC
AAGACGAAGATGTCCAATGAGGACGATTGATTCAAAGTTCTTCCAATCTT
TGAAGAAAGCAAAAATTTGATGTGAGAGTTAGATTGTCAACAAAGTGCCA
GAAAAAATTATTGAATAATAGAACAACTTTAAAATCTTGAATATTTTCAT
TTTGATGAATTGGTGCAAAAATATGGCATGCCAAATTACTTTTTATTACT
AACTTTTTTCACAGCCAACTTTGTTTCTTGATACCATTTTGCCTTGCCTC
GCCTCGCCTCGCCTCGCCTCGCCTACCCAAATCCAATATTTTGCTGTGTA
TCTGGGGCTTTACAGTCTCCCGCTAATTTTCGACTGACAAGGACTGCACT
TGACACAACAAGCGCACATGTACTTCAGGGAGTTCTTCTTTTCTTTGGCT
GAAAAGGCAGTGAAATAAATTAGGTCTAAAACAAAGTAAATCCCACTGTA
CTCCCGTTGGACATTATTCCATACAGCGGTTTCAAGGTTGTTGTTTTTGA
GAAAAATTAAGGCAGAAATCTTTTAAAAGGCAATTTAGAGGTTGTTTTGC
TAATTATATTCAATCTAGCAATTTAATTTCTTCAAAATAGCCGGTGTGAC
CTTTCCATTGCTTAAAAGGTAAGTTTATTTAAATTTTTCTCGGTTTAGAG
ATAATCAAATGATACAGATTAACACCATAATGAATAATGAATAAAGAAAT
TTGGTCACCAAAAACATGTATTAAATGGTAAATATGAAATTTTATTCCCA
TCATCAATCCATGATCCTTAAGGTGTAGACTATTTCTCATATTCACTTCT
TTGAAGAAAGTGGAAATTTGATGCGAGACGAAGATTTTCATCAAAGTGCC
GTAAAAAATCATTGAATGAAACAAGAACTTGAAAGAAATCTCAAATATTT
GCATTTTGAAGAATTGGTGCAAAAAAGTGAAACATGGAAAAGTTTCATTT
TTTATTGCTTTTTAATGGATGGGGGATTTGGAATTTTTTTAATGTTTAGT
TTTTTGCACAAACCCATGTAACTATGGGCAAGCACCCCGTTGCTAAGATG
TTGGCTTGAAATCGAAAATGAAACCACTGAAAACCAAAGTAAAATCGGCC
CGCACTCCAAATCCTGTAATCTTGATATAAGAGTTTAAGTCTATACTGGC
ACAGGGCTGCAAATAAATATTTTTAGTCAATCGGACATAATGTCCGACAG
AAATGAAATCCTGTCGGTCAAACTTAAAATCCTGTCGGTCATTTCAATGT
TTATTTTTTCTAAAATTATGCAGTCTTGAAAGTTACGGAGAAAGCAAGTA
GGTAAAATAAAAGTTACCTTGGAACAGTTTGTTACTGTAACAGAGAAATT
GATTCAATAAAAGTGATCTTAGAAACACCCTTGAAAGTTACGAAGAAAGC
AAGTTGATAAAAGTTAACTTAGAAACACTCTTGAAAGTTACGAAGAAAGC
GAGTTGATAAAAGTTAACTTAGAAACACTCTTGAAAGTTACGAAGAAAGC
GAGTTGATAAAAGTTAACTTAGAAACACTCTTGAAAGTTACGAAGAAAGC
GAATTGATAATAGTGATCTTAGAAACACTCTTGAAAGTTATGAAGTAAGC
GAATTGATAAAAGTGATCTTGGAAACAAAGAAAGTAACGAAGAAAGCAAG
TTGATAAAAGTTAACTTAGAAACACCCTGAAAGCTACAAAGGAAGCGAGT
ATTAAAAGAATAGGCTAAGTAAGAGACAGGAGTGTAAGAGATTTATTTTC
AACTCTCAAGTTAATGGTTTATTCCTTTTTTCATTCCGGACATCATGACC
AACACAAAAAATTTTCAGTCTGTCAAATGGCTTTTTCAGTCAGACATTGA
CAGATGACCAACGCTTATTTGCAGCCCTGCTGGCAGATCTCATTTTAGTT
TTAATTATCAGGGTTCAAATTATTGCTTCGCACTTTGCAAAATGCGAAAT
GAATTTTAGATTTAGTGACCAAAAAAGATTTCCTACAGTAACACAAAAAT
GCGAAGTTAAAAAATTAAAGTTAAAAGACAATACCTATTTTGCTACCCAC
ACATTTGTTTATCTATTGCTTTATCAGCTTGCTGCCTTGCAACTTTCTTT
ATTCATTTATCTATTGCTTTATCTACTCGCTACTTCGCAACTTCTTCATT
CGTTTATCTATTGGATTGCTTCATCAAGTCGCTACCTCGCAACTTTCTTC
AATAGTTTGTCTATTGCTTTATCTGCTCGCTACTTCGCTATTTTCTTCAT
TCTTTTATCTCTTGCTTTATCTAGTCGCTACTTTATTCACTCTTTTATCT
TTTGCTTTATTTATTTATCTTATTACTTTGTCTACAACCACTTACTTCAA
ATCTTACTTCGCTTTTCTTGAGAAATGCATTGAAGATACTTTTGCATTTT
CTTCCAAATAACATCGCAAAATACTAAAAATGCTTCGCAAACATTGAAAA
AATTTGGTCTGCAACACAGCTTCTTTTTTTACCTCGTTTCACTCAAAAAG
AAGGCAATCTCCCAGGCCTGGCCATGAATGGCGTGCGAAAGCACGCGCAC
GCGCTGGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAAATAACACGCCTAAAAAGGTTAAAAAAACTC
CAAGGCGTGCGATTTAAGCACGCCTAAAACACTCTTTGAAAATAATAGCA
CGCGCGTAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGATTATGTCTGATCTTTCTTTGTGTATACAAGAAAGAAAAATATTTTA
CTTTGTGTTTACACAAGCTTTGCATAATAAATTAGTTAAAGAGTGGTTGG
AGAGTATTTTTACAGGGCATACCGGATAAGTGGGATGGGGGAACCTGGGA
ACCTAAAGTGGGAACCTAAATGAACACCTGAAAAGTGGGATGGGGGAACC
TAAAGTGGGAACCTAAATGAACACCTGAAAAGTGGGATGGGGGAACCTAA
AGTGGGAACCTAAATGAACACCTGAAAAGTGGGATGGGGGAACCTAAAGT
GGGAACCTAAATGAACACCTGAAAAGTGGGATGGGGGAACCTAAGTGGGA
ATCTAATGAACACCTGAAAAGTGGGATGGGGGAACCTAAGTGGGAACCTA
AATGAACACCTGAAAAGTGGGAAGGGGGAACCTAAGTGGGAACCTAAATG
AACACCTGAAAAGTGGGATGGGGGAACCTAAGTGGGAAGCTAAATGAACA
CCGGAAAAGTGGGATGGGGGAACCTAAGTGGGAACCTAAATGAACACCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCCCACTT
AGGTTCCCCCATCCCACTTTTCCGGTGTTCATTTAGGTTCCCACTTTAGG
TTCCCAGGTTCCCCCATCCCACTTATCCGGTATGCCTTTTTACAGGAACT
CGTTATTATATTTATAACATCCCTGTCTCAGTGATTCGGTCCCAGCGTTG
TTTTAATGTTCATCTAATGTTCTATGGACGTTATGAACGTTAGATGGACG
TTGATACAACATTGTGTGCCAGCTGAAAATTGTTCAATCGTTAGAATAAA
GAGAATAAGTTGTTAGTTAGCATTAGCCTGAGAGACTCCATACTACGAGT
AGACCCCTTCTGAGATATAGATCTGATCAATTTCTTATCCTAATTAGTAG
ATATTAATAGCACGCCATAAAAGTTTTAGGCGTGCTATTATTGCACGCCA
TAATATAAGTTAAGATTTTAGGCGTGCAATCGTAGCACACGCACTGTTTT
ACTCAAGGCCAGGCCTGATCTCCTTAGATTTATAATTCAAACCCTGATTA
TTAAAAGAGTAGCGTTTAATCCTATTTGTTTAGAAGGAGGAATGCAAAAA
TTGTCCTCTAAAGATTTTTTCCAATGTCCAATAACTGTCTAGCCAGTTCA
ATATTTATATATTATTTTTTTAATAATAGTTTAGAATGAAAAGAATTGAA
TAGCGGGATGGTGACCATCAACAATCAACTGATTTTAGATGAAGAGTATG
ATGAAAATTACATACCAACTGAAGAAGGTTTGTCTGAGATCTTATTCGAA
ATTCCAACTGACAAAATGGTAGTTTAGTTATGTGAAAGCTGTCTCTGACA
TCTCTACAATCTCTTAAAAAATTCATTTTTCTCCGTCACTACATTTGATT
AGATCCTGATTTGTATGGAACAAACATATGTTTTCAATAGCTTCAATCAA
AAAGTAGTTTACATAGAATGATCTCCTTTCTTTACTGTTCTTTAGAAATA
TTTGAATATGCCCGGGTCATTGATATTGACCCTGAGCGGGAACCAGAGTT
GATGTACATTGCAAGGCAAGGTATTGTTGCGCCTCTGCCTGCAGATTGGA
AACCATGGTAAAATTCTCAATTTTATTCACTTTAACAGAATCTACAATTA
CCATATGATAAGATAATTGACCTTTTTTGAAAAGAAGTCTTAACTTTAGC
CCAGCTTACAATATTATCAATAGAAGATTGCTTGATACCAATGATAGAGA
TTTTATTAAAAATCATATGTTTGTACGTGTTAAAAGTCCTTACATCTTAT
ACTGAACTTAACTCAATTTTTCAGTTACTGCAATATGCTAACATTTTTAT
GTATTAATAGCCTTCATCAACTTGATCAATATCTTTCACCTTAGAAGACT
TAAAAATTTTTCCCTTTCAGCCAAGACCCTAGTGGAGAGATCTACTACTT
CAACTTTTCATCTGGTGACAGTGTATGGGATCATCCTTGTGATGAACACT
TTCGTGAAATGGTTGCCAAAGAACGTGACATGTTAAAAAATAAGAAACAA
AGCTCAAAGAAACAAGGAAAGGAACCAAAAAAGAACAAAGACAAAAAAGC
TAAGAAAGATGCAAAAGTAAGATTTAGAATTCCCTTAATTTTTTCTGAAT
TTATCTTGACACATGTATAGTTTTGTGATAGACATATCATAAGTTTTATT
GTGGCTTGTATCTTGATATCAACACTTAGCTGTTTTTCTAGAAACACTTT
GTTCATAATCAAACACAAATATTTATTTACAGAAATCTTGCTTAATTTTT
CTTTATCTTTATGTACTATTGTGTAAACAATTTAACAAAACCTTTTGTTA
ATAAACAGAATTCTGTGGTGACTTCAACACCCACACTGGGTCAATTAAAA
CCAATTGGAGGAAAGCTGGATGGTTTATCTTCTGGCAATTTAGCTCCTGT
TAAAAGTGCAGCTTCCAAACAACTTGGTCCTTTGACTGGATTGGATAAAG
TACGACATTTTAGTTATATATTAGTTTTTTTTTAGATATTACTATACATC
AATACTATTATTATCACTACTTGTACATAACCTTAATGATGAAATCAATA
CAACCATATGGTATTTTTTATTGATATTCCAGCCAAAAACATTGAGCACC
GCAGTATCAACATCAAACAAGAAAAACAATGATAACTTTCAAATGTCAAG
AGGAACTGGAGAAAAAGTGAATTTCCTCGAACAACTTTCTGATATGAGTG
AGGTTGGCAAAAGATATTTCATAGGAAGTTCTTAAATCCACATATTTTAT
CCAGTGAAATATTTTTAGAATATTCATTTTATCATGATGATGATAACTTG
GTACTATGTCTTCTTCTTTTAAGAGTAAATAAGGGAGTGCCTTCCTCTGC
TCCCGGCTCTACTGACACACATTACCTTAATAAGGGATCTAATTTTCAGG
GTTTAGGCCAAAAACCGCAAGTAAAACAATATTATATATTATACAAGTAT
TTCTTCTTTTAATAGTATTCAGATGGCAAACCAAAATTTACTTTAGATGT
TGATGATAAATATGATATTGCCAACCTTGGCTTTGAGGTATTGCTTTTAC
ATAAAAAGTATTTGACAGGTACCACAATCAATAGCTAAGATTAATCTAAA
TAAGTTTGCGTTTATCGACCCAGTGATATTCATATTGGAAGTTTATCGTG
GCTTGGATCACGAGATTTACGTTTGGCTACGTTTCGAGAGATTCTTCTCC
CATCATTGGGCAAAGTGGAGGATGTTTAGTGTTTTCCCCACTATTTGTAC
TGATATACCTTCTAATTACACATAATTATCAAGTGTAACTTCCTTACAAG
GTTTCTCTCTCGAAACGTAGCCAAACGTAAATCTTAAAACTTCCAATATA
GCTAAGATATTTAATGTGGTATTTAGTGTATTTATGATCAATCTTGTTTG
AAGCTTTTTGGTAACTTTCATGAATGAATTGTTTGCAAAACTATAAAATG
TCTCCCTTTCAATCATAGGACTCGGATGGAATCAGTGCAGACCAACCACC
TGACTATTTGGATGTCAAATCTGACGAAAGTCGTGGCGATGAAGATGATG
ATGAACTTGTGAATATTTTATTCCTTTATTAGTTTCTTTCTTATGTTATG
TCTTGATTAAAAAGTATGTCTGTAGATGAAGTTGATAGGTAGAGCATTCC
CAGTTAACCATACCAGCTGACGCTTGCAAAACATTGTAAACTTTGATGAC
AAAGTCCTTTTAATAAATACCAGTTTGCAAATGTTTTCTTTCTCATTCAA
TCAGAATATATTACTTCAGTTGATTGATTAAACGGGAAAAAATAAGTGCC
TTTTGTACTCTAAACTACAATTCAAACTTTCAAGCAACCTTTACGATGTG
TATGGTTATTAACAAATTATTNAAACTACAATTCAAACTTTCAAGCAACC
TTTACGATGAGTATGGTTATTAACAAATTATTGTTTCGTTTTACTATAGC
TGATTATCTTTTTAGGACTTTGGTATCAGTGCAGGGTTAGCAGCCCGTCT
TGATGGGATGAGTATTGAGAACCTTGGTGGGTTCAATTCTTATCAAGAAG
GGAGTGACGAAAGTGAGTTTGACATCAAACAATCAAGTCGTGAAGATATC
AACATGTTAAATATCTCTCAGCCCACCATCAACACATCTTTTGATCAAAT
GAAAGGAAGCAGTATTGATGTAGATGACGGCAGAAAACAAAGAGCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002955XLOC_002955Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005198-exon-sc0000051-1575043694:350936..350965TCONS_00005198-exon-sc0000051-1575043694:350936..350965Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:337739..337836TCONS_00005198-exon-sc0000051-1575043694:337739..337836Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:337409..337520TCONS_00005198-exon-sc0000051-1575043694:337409..337520Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:336900..337095TCONS_00005198-exon-sc0000051-1575043694:336900..337095Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:336517..336657TCONS_00005198-exon-sc0000051-1575043694:336517..336657Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:336264..336383TCONS_00005198-exon-sc0000051-1575043694:336264..336383Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:335929..336000TCONS_00005198-exon-sc0000051-1575043694:335929..336000Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:335408..335497TCONS_00005198-exon-sc0000051-1575043694:335408..335497Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1575043694:334767..335000TCONS_00005198-exon-sc0000051-1575043694:334767..335000Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:350936..350965TCONS_00005198-exon-sc0000051-1510915933:350936..350965Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:337739..337836TCONS_00005198-exon-sc0000051-1510915933:337739..337836Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:337409..337520TCONS_00005198-exon-sc0000051-1510915933:337409..337520Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:336900..337095TCONS_00005198-exon-sc0000051-1510915933:336900..337095Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:336517..336657TCONS_00005198-exon-sc0000051-1510915933:336517..336657Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:336264..336383TCONS_00005198-exon-sc0000051-1510915933:336264..336383Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:335929..336000TCONS_00005198-exon-sc0000051-1510915933:335929..336000Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:335408..335497TCONS_00005198-exon-sc0000051-1510915933:335408..335497Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1510915933:334767..335000TCONS_00005198-exon-sc0000051-1510915933:334767..335000Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:350936..350965TCONS_00005198-exon-sc0000051-1491911889:350936..350965Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:337739..337836TCONS_00005198-exon-sc0000051-1491911889:337739..337836Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:337409..337520TCONS_00005198-exon-sc0000051-1491911889:337409..337520Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:336900..337095TCONS_00005198-exon-sc0000051-1491911889:336900..337095Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:336517..336657TCONS_00005198-exon-sc0000051-1491911889:336517..336657Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:336264..336383TCONS_00005198-exon-sc0000051-1491911889:336264..336383Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:335929..336000TCONS_00005198-exon-sc0000051-1491911889:335929..336000Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:335408..335497TCONS_00005198-exon-sc0000051-1491911889:335408..335497Clytia hemisphaericaexon
TCONS_00005198-exon-sc0000051-1491911889:334767..335000TCONS_00005198-exon-sc0000051-1491911889:334767..335000Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:334767..350965 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.68511	10.4892	1.84992	1.75361	27.6498	24.6092	12.7068	13.9135	10.1735	14.8987	12.5081	7.70366	6.1515	5.82008	7.27307	5.97088	8.40087	11.2254	5.24207	5.82671	4.82872	8.43012	15.5416	12.9527	18.9555	15.8187	6.51353	6.91294	14.9969	17.3256
Blast
[Close]
BLAST of TCONS_00005198 vs. Swiss-Prot (Human)
Match: CE164 (Centrosomal protein of 164 kDa OS=Homo sapiens GN=CEP164 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 7.511e-42
Identity = 63/98 (64.29%), Postives = 84/98 (85.71%), Query Frame = 2 
Query:   62 VTINNQLILDEEYDENYIPTEEEIFEYARVIDIDPEREPELMYIARQGIVAPLPADWKPCQDPSGEIYYFNFSSGDSVWDHPCDEHFREMVAKERDML 355
            + I +QL+L+E+YDE YIP+E+EI E+AR I IDP +EPELM++AR+GIVAPLP +WKPCQD +G+IYYFNF++G S+WDHPCDEH+R +V +ER  L
Sbjct:    6 LRIGDQLVLEEDYDETYIPSEQEILEFAREIGIDPIKEPELMWLAREGIVAPLPGEWKPCQDITGDIYYFNFANGQSMWDHPCDEHYRSLVIQERAKL 103
The following BLAST results are available for this feature:
BLAST of TCONS_00005198 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE1647.511e-4264.29Centrosomal protein of 164 kDa OS=Homo sapiens GN=... [more]
back to top