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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005038 ID=TCONS_00005038|Name=TCONS_00005038|organism=Clytia hemisphaerica|type=transcript|length=1989bp
gcaaaaaataaatctacatcAATCATTTTAATCGAGATGAGCAGTCGAAA
ACGATCACATTTTATCCAAGCAAAAGATGAATTTGACGAATCACACACGA
TCAACATTCCCTGTCGAGTCAATAATATTCGTTTTCAAGGCTTCGATGAA
ACTGGGAAATTTTACTGCATTTTAGAACGTACTGTTCTGGATCGTGTCTG
CTTTCACGTAGTATACTATACAGAGCAAAGAAAGTTGACACGACAAATGA
TCGAGATCCGAATTCCTCAAAGTCAATTTagtttaaagaaaaaagttttt
ttcaatcctGCAGAAACTAAACTGATATATTTGACGGAGGAAAAAGTTAC
GACAGCTGAAAATCACCAAGAGCTCATTGTGAATTTATATTCTTTTGAAC
TGTTTTCGAAATTCGGTATTGGGAATTGTGAATTATCGCTTGGTGAGCCT
GCTTCAACCCTGACATATTCTAACTACAATACAATCGATTATGTACACAA
AAGGACgatttcaacattaatcatTTACGCGTATCGAAAAATTGAGGACG
GCGAAAGGTCTTTGTTGAACTCGTTATACTCGCCTCGTTGTAGTCTTGAT
ATTGCTAAAAGCAACAATGACGGTTGTTTACACGTCAAACGAATCGAATT
TAACTTATCTGTTTTCTCAGAGGTTATTACTCGGAGAATGCCCAGGTTAA
GTCTCTCTTCGAATGGCTCTTTTTATTTTTACCGTAAAACTGATGAAACG
GAGATTGGCGAAACTTTGGAGATGAAAGAGTTTGATTCTCAAAGTAAGCT
GAAGTATTCTTACTCCATCTATCTTCTTGGCGAGTTGAATATACTTTACG
ATTTTGTGGAGATTGAACGATCAATGCACATTGTGTTGAAGCGAAATAAT
GGTGTTGTAACCATGTGCAAACTGATCGATGGTCAAGTCATCAGTATAAA
GGAATTCAATACCAATCAATACATCGAAAAGCTTGGCTTTGAACAGATCC
TTCATCCTATGAATAGGTTTGATCATCTTTTGTTGCCAATTTATCAGAAG
ATAGGCAGCAACTCACAGCGTTTTAACATCCTTGATGTCACGGATGAAAG
AAAAAGTGTCgatattttttatgagaatCCATGGTATCAGCATTACGCTC
TAAATTGGAACGAAAGAGAATTTGCAACAATCGACTGTAAAAAGAATATG
GAGAGAAGAAATCTGCTGACCTTCAAGATTGACATTTTGAAGTATGAACG
GGACCCTCCAACATTGAGACAAATATCTCGCCTAGCCGCATTAACATCAT
TCAGTCATTGTGACTTGTCAAGATTCAACCTACCGTCTACGTTGGTTCGA
TACCTGGGTATCGATCAATGAGTTAGGATCGTGTGGAAATcaattttatc
caaaaattcTCTTCCATTGATGTCCTTTGACAAGAGAAAGCCTTATTACA
TTTTCATGttgattttgatgatattttgTTACATTTATTATTACTTGATT
GCTACTTTTTTATAGTGTTCTTTTGCGTTATTTAGTTTCTTCTTGGTTTA
GCCATCTTCTGAAAATCCCAATCTTATCGTTATCGCCCCTCTTTTTATCc
caaaccattttcaaaagatatCTCTTTCTTCTTTGTTTCACTATACATTG
GTGTTGATGAAGTAGTTTTGGTGACCCTACAGATTGGGCATACTTGAGAT
GAGGTTGGAAAAAGGTTGTGTACAGAGTGAAGATAGTTTTAAGGCTTAGG
TCTTCGAAACCTCTTCTGATGACTCCGAGAATGGAATTTGCTTCTCTAAT
GACCACCTTAATGACGGTGTTAGAGTCGTCTAGTGAAGGGTCTTTAACTA
CTTCAGCATAAGACCGCTTTACCACAGTCATTTGGTTTTCAACACTCAAA
CATGATGTCGTCAAAAATCGACGCCTTCATGGTTGCAATAAACTCAATGA
TCtcttttttaatcttttgattCATCTCGTCTACGGAAC Run BLAST on NCBI transcript from alignment at sc0000050:97709..99697- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005038 ID=TCONS_00005038|Name=TCONS_00005038|organism=Clytia hemisphaerica|type=transcript|length=1989bp|location=Sequence derived from alignment at sc0000050:97709..99697- (Clytia hemisphaerica)
GCAAAAAATAAATCTACATCAATCATTTTAATCGAGATGAGCAGTCGAAA
ACGATCACATTTTATCCAAGCAAAAGATGAATTTGACGAATCACACACGA
TCAACATTCCCTGTCGAGTCAATAATATTCGTTTTCAAGGCTTCGATGAA
ACTGGGAAATTTTACTGCATTTTAGAACGTACTGTTCTGGATCGTGTCTG
CTTTCACGTAGTATACTATACAGAGCAAAGAAAGTTGACACGACAAATGA
TCGAGATCCGAATTCCTCAAAGTCAATTTAGTTTAAAGAAAAAAGTTTTT
TTCAATCCTGCAGAAACTAAACTGATATATTTGACGGAGGAAAAAGTTAC
GACAGCTGAAAATCACCAAGAGCTCATTGTGAATTTATATTCTTTTGAAC
TGTTTTCGAAATTCGGTATTGGGAATTGTGAATTATCGCTTGGTGAGCCT
GCTTCAACCCTGACATATTCTAACTACAATACAATCGATTATGTACACAA
AAGGACGATTTCAACATTAATCATTTACGCGTATCGAAAAATTGAGGACG
GCGAAAGGTCTTTGTTGAACTCGTTATACTCGCCTCGTTGTAGTCTTGAT
ATTGCTAAAAGCAACAATGACGGTTGTTTACACGTCAAACGAATCGAATT
TAACTTATCTGTTTTCTCAGAGGTTATTACTCGGAGAATGCCCAGGTTAA
GTCTCTCTTCGAATGGCTCTTTTTATTTTTACCGTAAAACTGATGAAACG
GAGATTGGCGAAACTTTGGAGATGAAAGAGTTTGATTCTCAAAGTAAGCT
GAAGTATTCTTACTCCATCTATCTTCTTGGCGAGTTGAATATACTTTACG
ATTTTGTGGAGATTGAACGATCAATGCACATTGTGTTGAAGCGAAATAAT
GGTGTTGTAACCATGTGCAAACTGATCGATGGTCAAGTCATCAGTATAAA
GGAATTCAATACCAATCAATACATCGAAAAGCTTGGCTTTGAACAGATCC
TTCATCCTATGAATAGGTTTGATCATCTTTTGTTGCCAATTTATCAGAAG
ATAGGCAGCAACTCACAGCGTTTTAACATCCTTGATGTCACGGATGAAAG
AAAAAGTGTCGATATTTTTTATGAGAATCCATGGTATCAGCATTACGCTC
TAAATTGGAACGAAAGAGAATTTGCAACAATCGACTGTAAAAAGAATATG
GAGAGAAGAAATCTGCTGACCTTCAAGATTGACATTTTGAAGTATGAACG
GGACCCTCCAACATTGAGACAAATATCTCGCCTAGCCGCATTAACATCAT
TCAGTCATTGTGACTTGTCAAGATTCAACCTACCGTCTACGTTGGTTCGA
TACCTGGGTATCGATCAATGAGTTAGGATCGTGTGGAAATCAATTTTATC
CAAAAATTCTCTTCCATTGATGTCCTTTGACAAGAGAAAGCCTTATTACA
TTTTCATGTTGATTTTGATGATATTTTGTTACATTTATTATTACTTGATT
GCTACTTTTTTATAGTGTTCTTTTGCGTTATTTAGTTTCTTCTTGGTTTA
GCCATCTTCTGAAAATCCCAATCTTATCGTTATCGCCCCTCTTTTTATCC
CAAACCATTTTCAAAAGATATCTCTTTCTTCTTTGTTTCACTATACATTG
GTGTTGATGAAGTAGTTTTGGTGACCCTACAGATTGGGCATACTTGAGAT
GAGGTTGGAAAAAGGTTGTGTACAGAGTGAAGATAGTTTTAAGGCTTAGG
TCTTCGAAACCTCTTCTGATGACTCCGAGAATGGAATTTGCTTCTCTAAT
GACCACCTTAATGACGGTGTTAGAGTCGTCTAGTGAAGGGTCTTTAACTA
CTTCAGCATAAGACCGCTTTACCACAGTCATTTGGTTTTCAACACTCAAA
CATGATGTCGTCAAAAATCGACGCCTTCATGGTTGCAATAAACTCAATGA
TCTCTTTTTTAATCTTTTGATTCATCTCGTCTACGGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005038-exon-sc0000050-1575043694:97709..99697 | TCONS_00005038-exon-sc0000050-1575043694:97709..99697 | Clytia hemisphaerica | exon |
| TCONS_00005038-exon-sc0000050-1510915933:97709..99697 | TCONS_00005038-exon-sc0000050-1510915933:97709..99697 | Clytia hemisphaerica | exon |
| TCONS_00005038-exon-sc0000050-1491911889:97709..99697 | TCONS_00005038-exon-sc0000050-1491911889:97709..99697 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050 | supercontig | sc0000050:97709..99697 - |
Blast
The following BLAST results are available for this feature:
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