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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005036 ID=TCONS_00005036|Name=TCONS_00005036|organism=Clytia hemisphaerica|type=transcript|length=2692bp tttttatattaGCTTGAAAGCATGATTAAGATTGATGATAGTGTTTTGAG AGAtctttttgatgttttgtttatattttcagtAGCAAAAAATGTGACTT TTGAGCCAGGCACAAGAGCCGTTTAAATGTCTAGAAAAACACATGAAAGA TTTTTGACTGGTTGATTCTTAATTTCTTGGCAACAAAATGATGGCTGTTG AAAAACGAAGTGCTGTTGGAgatAAGGCAAAGGAAATTGAAGGCAAAGCC AAGGAAATATGGTTACAAATCGAGACATTTTTCATCAATCTATGGAATTG GTCTTTAAAACATAAAGAGATAGCTATCCCTGCTGCAGTTGGTATTTTAT TGGTCCTGGTTTTGTTCTTCTCgtgttgttgttattgttgttgctGTCGC AAGAAGACTcgtaagaaaataaaagaaaagttgaaaatgaaaGGAGTAAA GCCGAGCAAAATGTTGAGACGTATACAACCAGGGAAAAGGGTCAAAAGAG TCATGGAAGAAGTTGGCTCGATGACATTTCGCTTGAAATATAATCAATCG ACTGAAATTTTGACAGTGAAGGTGATCGAATCAAATGATATACCGGTCCG TGATTTGAGTGGTCACAGCTACTCATTCGTTGAAGTCAAACTCCTCCCAC TACACAAGGATTCGCCCATTGAATATAAAACCGCCCTTGTACGCCCTGCA ACATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTATCCCTCAGAA AGAGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAAAAGAATCGTT TCTCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTTGAAATCGGTT CTCACAACGAAAGAAGAAGAATATATCAAGAAATTGTATCCGTACGATCC TCTCATAGGAGTGGAAAAGGAAACGGGAGCAGTTTACTTATCCATGGAAT TAGATCGAGATATTTGGGAATTGAAGATCGAAATCGAAGAAGCAGACATT CTGCCGGAAGACgaagataaagaaaaatgtaCATCTTATGTGACCTTAGC CATACTGGATAAAGAAGGAAAAAGACTTGAGAAAAGAAAAACGAATACAT GTCCAGGGACACTTCAACCTGAATTTGACGAAGTTATAACTTTCTCTGTA CCTGATGGATCGTTACTAGATACACAGATATTAATCAAACTAAAGAGTAA AAGGTTTTTATTACCGAGTAAATTGATAGGACAATTTATCATCACACCTG AATCTGAGAGTTGGAAGAAACTTTTAGAAGACAATGCATTGAAAGCACGT TGGTTTCAAATGTACCATAAGCCGAGCAGTTGATGGTTTGGAAGAGCTTA GTAAAAAGAAGTTTGGAATAATGCTCTGGTTGTGTTTAACTGTGAGATAT GGGATACCAGCCGTTCCCTTTCCCTATGTTCATCCTTCAATTTGAAGACA TTTATTGACTCGTATCGGAGAAATATTAGGAAACCACATGTAGAAAATAA TTTAAGAAGAACCTATTTCAGCCCTGGTCTAACGTCTCCAGTTATTAAAT GGTATAATGTGAAGGGTATGAATCATTGGACTTTTGGGAAAAATATGAAA TGTTTAGTTTTACCAGACGTCGTCATATTCtaccaaagtgatcaacgatt AGTAGGCAGATATATTTCATTTCGTCGTTGATTCCAATTCATCTTCCAAT GTTGGTTGTGGTTTATCCTATGATAAACGATGATGAATCTTTTAAGTTGC CGGGTATCATCCCGGGGGGTACTTAGCCAAATGGAGGGtatggtatgtgc cgcccttaagggcaccttttttggatttccaaatttcaaatttcagtccc actaagggtgggactttttacccccggaaagatcgTCTTGTTATAGTAAC TCACGTAGAGGGAACTAATCTTAGCgatttttcagttaaaaaagaacaaa tttacCTTCCTGCCACTGGCCAAGGTTGGTTctcacaaaaatgtaaaaaa agttGGATTTTTGCTGCTCGCCCAAATTAGTTTCCATAAAGTAACTTAAG TAAGGAGTTGAGAAAGGGATCAGTCGCCCTTTTCCCCAAGGTGTAACTTT AAGGCGTAAGTTGGATGAAATTAGGAGGAAAAACttggagagatttttta gaaatatgtgttctttaTCTTCTAAGAGATCTCACATGTTATGACCTTCa attttcttatacaaatgATTCGTATATGATGAGTGTTGATGAGTGTTCTG ATTTCTAAGAAGCCTTTATCacactatttgtctccctaaactttttacta ctttatagttggatgtgttctaaaatctaggaaataaattttgcaaagac ataatatttgtttttttttagatatagatatttgttttttttccacaaaa gatgtgttctgaaattttttagggttactaggcaacaagaacACATTTGA cgaccttgattatacccctgtctcgtcagaaaaCATCATTATTTTTAGCT TATTATTTTAAGAtcttatcagaacagatcaaaatttctagctgaaacgt actctcagaacacatcggaaaaaaaggtcaCCTCGCCGACTCCTTTCGAA TATCTaccttcttttgaaaaaaaaacaaaatattttagaaGTTCTCTGAC CTTCCCTGACCTACCTACCTACCAAAATGAAGCAAAACCTCC Run BLAST on NCBI protein sequence of TCONS_00005036-protein >TCONS_00005036-protein ID=TCONS_00005036-protein|Name=TCONS_00005036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MMAVEKRSAVGDKAKEIEGKAKEIWLQIETFFINLWNWSLKHKEIAIPAA VGILLVLVLFFSCCCYCCCCRKKTRKKIKEKLKMKGVKPSKMLRRIQPGK RVKRVMEEVGSMTFRLKYNQSTEILTVKVIESNDIPVRDLSGHSYSFVEV KLLPLHKDSPIEYKTALVRPATFNPSFGDGFTFCIPQKEAKQQKLCLTQY EKNRFSQKDGIGQIEMDLKSVLTTKEEEYIKKLYPYDPLIGVEKETGAVY LSMELDRDIWELKIEIEEADILPEDEDKEKCTSYVTLAILDKEGKRLEKR KTNTCPGTLQPEFDEVITFSVPDGSLLDTQILIKLKSKRFLLPSKLIGQF IITPESESWKKLLEDNALKARWFQMYHKPSS Run BLAST on NCBI transcript from alignment at sc0000050:82991..91166- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005036 ID=TCONS_00005036|Name=TCONS_00005036|organism=Clytia hemisphaerica|type=transcript|length=8176bp|location=Sequence derived from alignment at sc0000050:82991..91166- (Clytia hemisphaerica) TTTTTATATTAGCTTGAAAGCATGATTAAGATTGATGATAGTGTTTTGAG
AGATCTTTTTGATGTTTTGTTTATATTTTCAGTAGCAAAAAATGTGACTT
TTGAGCCAGGCACAAGAGCCGTTTAAATGTCTAGAAAAACACATGAAAGA
TTTTTGACTGGTTGATTCTTAATTTCTTGGCAACAAAATGATGGCTGTTG
AAAAACGAAGTGCTGTTGGAGGTTTGCTTTTGTTTTGTTTTTGTTTTGTT
AATCTACACAATTGACAGCTCCAGGCTTTTAGGCCTTACGAGATTTACGC
GGAAACGAATGGAAATATGGCGTAGCCTAACCTTTTGTTTCATATACACT
ATTTGACCCTGGTCAAATTACAGTACCAGATAAAACTGAACTTAGATAGT
ATTGATTTTTGTGTAGAATTTTAGGGTTCGTTTATTTCCAAGTTCATCCT
CTTATAAGACACAATGCTTTAAGATTACTACACTTTTTTATATAAGAACA
ATTTTATAAGAACAATGAGGCTCAAAATCGCCAAAAAATAAGAACAATTT
TAAGGACAATGCTGAGACTGAAATTNGCTTGATTCATCTCATCTACGGAA
CATCTCTCGATTGACTGATCTTTTTCTTATTTTGTTTCGCATTGCGTGAC
TTCGCCAATTGGACTGACTTGATTAATTTCTTCTCATTTATTTTCTCATG
TAGTTTTTTATAAAAAGACGTACCTTAAAGGGAGAAATTTTGGCGGGAAG
AACATTTGGCGGATTTGGTCAAAATCCGCCGAATTAAGTTCCCGCCAAAT
TTAAGTTGCTCTATTTATTCCCCCAAATGTNCCTCTATTACACCCTGTAA
ATAAGAACAGGTTAAGAATAATTTGAGGCTCAAAGTGCTAAAAAAATAAG
AACAGCCGAGCCTCAGGAAAATTTTACTGGTTCTTATAAAAAAGTGTATC
TTGGTATAAACTTTCATTGAGAAAATGATAGCTAGCTAGCACCAGGTTCT
TTATTACTCTTGTCTCCCGAATAGACGCCCCCCCCTCCCGCTAATTGTTG
AGAGAAAAAAAATCCATCCCCCCGCTCTTATTAAGACCCCCCCGCTAATC
AAATTCGAATAATTCAATATCTTATTACAGTGTAGATGGACCTTAAACTT
GTTAATATTTTCCTTTTTGTTAGTATTGGTTCTTATTTTACGTGTTTATT
TGCAGAAGTTTCTTTTTTGTTGTTGAAATTGATATCAGTTAAAAAAAATT
CAGTCTTCAAATTACCCCTCCCCTCTTATTCCATTCTTATATTGATTCTG
GTATCGTAAAGTTTTACTCAAGATACGTTGATGATACACTCCTTGTCATT
CGTCCAGTAGATATCGATAAAGTTCATTGCTCCCTTAACAAATTTGATAA
AAATCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTCGGGAG
ACAAGAGTACAATCCTGGACAAAACTGTGTGTCCACCCCCTCCCTCTCTC
AATATCAATGTCTCGGAGTCTTGTGAACGTGTGACAAATATTTAAATCCA
ATATTGATTTTTTTTTGGGGGGGGGGACTTTCCTGTGGGAAAGGGACACC
AGTATTGACCACGATTTCAGTTTGGTTTGTTGAAGCAAACACTAAGACTT
AATCACTGTAAGTCATGTTGTTTTGATAATTTTCAGATAAGGCAAAGGAA
ATTGAAGGCAAAGCCAAGGAAATATGGTTACAAATCGAGACATTTTTCAT
CAATCTATGGAATTGGTCTTTAAAACATAAAGAGATAGCTATCCCTGCTG
CAGTTGGTATTTTATTGGTCCTGGTTTTGTTCTTCTCGTGTTGTTGTTAT
TGTTGTTGCTGTCGCAAGAAGACTCGTAAGAAAATAAAAGAAAAGTTGAA
AATGAAAGGAGTAAAGCCGAGCAAAATGTTGAGACGTATACAACCAGGGA
AAAGGGTCAAAAGAGTCATGGTAATTGTTTGTTTTAGGCCTTTTATTCAT
TTATTGATTATAAATTTGTAAAAACAAAGTGATATACCTTATTACACAAA
TATTACTAGGCAAGTATTTAACGCTCTTGAAATTTGCACGATCTGAAATT
AACACGAATTGTTCTGATTTTTCAAGGAAACGGTGGCTGGTTTTAATTAA
GGGGATTTTTATTAGCACGAAATTTTTCAATTATATGACATAATAAAATG
ACTAGTAATATCCGTGTAATTAGATATGCGATATGCCTCGACGAAGACGG
ATTCATCATTTTCCAAAATGTTGGCCCCCAAGTGTTGGCCCCCTCACTCA
AAATGGCTCGCCGGGGCCCATGTTCATACATCTGATCTGCGACCCATGTA
TCCCCTGTTGTTAAAACGCTAGTTTGTACAAAGATTATTTCAAATTTTTC
AGAAAAAAAAAATTCGTCCTCTGTTGCCAAACTTTTTTTAATCCAAACAA
TTAATTATAACTAATTTTCAATTCGATTAAATCTTTCAGGAAGAAGTTGG
CTCGATGACATTTCGCTTGAAATATAATCAATCGACGTAAGTTCAATTCT
TGTTTAAAGATTCTCATATAAGCCATTGGGTCAGGCTTCCCTTGTTTTTA
ATTGCAACGATGCCATGGTAGATTCTAAATATTAACAACGCTTTGCTTTC
ACAAATTCTAAGGATAATACCAGCAATAAATCCTAGTAAAACAAAATTTC
CCGCATATCGTATTTCTCTTTCTCAGTGAAATTTTGACAGTGAAGGTGAT
CGAATCAAATGATATACCGGTCCGTGATTTGAGTGGTCACAGCTACTCAT
TCGTTGAAGTCAAACTCCTCCCACTACACAAGGATTCGCCCATTGAATAT
AAAACCGCCCTTGTACGCCCTGCAACATTCAATCCTTCATTCGGGGATGG
GTTCACTTTTTGTATCCCTCAGAAAGAGNATTTTTGGTTTACATTATGAA
AAGAAGATTCGGCCTTCAAGTATGTTAAAATTAATGAACCTTAGTGCTGA
GGAATCGTAGAACGTTTTTTCTCCTATGTAATTTTGAACGGGTTTAATAT
AAAGATGGCTCTTTCTTTAGATTTATTTTTGATATTTTCCTTTCATTTCA
GCATCTTATGTGACCTTAGCCATACTGGATAAAGAAGGAAAAAGACTTGA
GAAAAGAAAAACGAATACATGTCCAGGGACACTTCAACCTGAATTTGACG
AAGTTATAACTTTCTCTGTACCTGATGGATCGTTACTGGATACACAGATA
TTAATCAAACTAAAGAGTAAAAGGTTTTTATTACCGAGTAAATTGATAGG
ACAATTTATCATCACACCTGAATCTGAGAGTTGGAAGAAACTTTTAGAAG
ACAATGCANGACATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTA
TCCCTCAGAAAGAGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAA
AAGAATCGTTTCTCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTT
GAAATCGGTTCTCACAACGAAAGAAGAAGAATATATCAAGAAATTGTATC
CGTACGATCCTCTCATAGGAGTGGTATGTAACTCAACTTTTTCCAATTCA
AATTTATCTTTCACGCTTGTTTTTTTAATATCACTGATACGTCATGGCTC
TGTTGTCTCGTGAGCACATGGTTAACGCTGTCTGGTATATGCTATGATTT
CCCTTATCCTAGAAAGGATAACTATTCTGGGTTAGTGCCCATTCCGTTCA
CATTGGAGAGATCATCTTTCCTGCCTTCCTACTTTCCTCCCCCTGAATAT
CCGTCGTAATTGGTCGAAAAACAACGTTTTAATTTCCTTTACTTCTAAAC
GCTGCCCTCAATTTTAACTGTCCCATCTAGAAGTATAAGATAAACACTTT
CGAAAGCACACACGTTTAGAATTTTTCATCGTTTTGTGTCTTTTAATGAT
GATCCAGGATAATCATGTTGTGCTTGCGTTGAAAGTTGTGTTAAGAATTA
CCGTCTCAAAATTCTAAAAATTTGGGAGAATTTGTCGTGAATTGATGTTT
TTAAGTTTTTCGGTCAATCTTTCAGGAAAAGGAAACGGGAGCAGTTTACT
TATCCATGGAATTAGATCGAGATATTTGGGAATTGAAGATCGAAATCGAA
GAAGCAGACATTCTGCCGGAAGACGAAGATAAAGAAAAATGTAGTAAGAT
TCTAAGTGTCTTTAGCTCGTTTAATTAATTTCACCTTGCTTGATTGATTA
ATTGTCTTTTGTAGAAATTTGCTTTAGTATTAACACCTTTGTCCCAGTTT
AATCACCTTGTAAATTACTCTTAGGTCCCAAATAAACGGGGGGGTGCTCA
AATAAACAGGGGTGTTGGAAAATTTTCGAGATTTTAAAAAACGGGGGGGG
GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGAGGACCTAGTAAGGTCCAGGGGGTTGGAAAATTTTCGGAAAATTAA
CAAGCGGGGAGGCCCGTTTATTTGGCACCTAAGAGTAAGGCTCATTTTTG
GTTTACATTATGAAAAGAAGATTCGGCCTTCAAGTATGTTAAAATTAATG
AACCTTAGTGCTGAGGAATCGTAGAACGTTTTTTCTCCTATGTAATTTTG
AACGGGTTTAATATAAAGATGGCTCTTTCTTTAGATTTATTTTTGATATT
TTCCTTTCATTTCAGCATCTTATGTGACCTTAGCCATACTGGATAAAGAA
GGAAAAAGACTTGAGAAAAGAAAAACGAATACATGTCCAGGGACACTTCA
ACCTGAATTTGACGAAGTTATAACTTTCTCTGTACCTGATGGATCGTTAC
TAGATACACAGATATTAATCAAACTAAAGAGTAAAAGGTTTTTATTACCG
AGTAAATTGATAGGACAATTTATCATCACACCTGAATCTGAGAGTTGGAA
GAAACTTTTAGAAGACAATGCATTGAAAGCACGTTGGTTTCAAATGTACC
ATAAGCCGAGCAGTTGATGGTTTGGAAGAGCTTAGTAAAAAGAAGTTTGG
AATAATGCTCTGGTTGTGTTTAACTGTGAGATATGGGATACCAGCCGTTC
CCTTTCCCTATGTTCATCCTTCAATTTGAAGACATTTATTGACTCGTATC
GGAGAAATATTAGGAAACCACATGTAGAAAATAATTTAAGAAGAACCTAT
TTCAGCCCTGGTCTAACGTCTCCAGTTATTAAATGGTATAATGTGAAGGG
TATGAATCATTGGACTTTTGGGAAAAATATGAAATGTTTAGTTTTACCAG
ACGTCGTCATATTCTACCAAAGTGATCAACGATTAGTAGGCAGATATATT
TCATTTCGTCGTTGATTCCAATTCATCTTCCAATGTTGGTTGTGGTTTAT
CCTATGATAAACGATGATGAATCTTTTAAGTTGCCGGGTATCATCCCGGG
GGGTACTTAGCCAAATGGAGGGTATGGTATGTGCCGCCCTTAAGGGCACC
TTTTTTGGATTTCCAAATTTCAAATTTCAGTCCCACTAAGGGTGGGACTT
TTTACCCCCGGAAAGATCGTCTTGTTATAGTAACTCACGTAGAGGGAACT
AATCTTAGCGATTTTTCAGTTAAAAAAGAACAAATTTACCTTCCTGCCAC
TGGCCAAGGTTGGTTCTCACAAAAATGTAAAAAAAGTTGGATTTTTGCTG
CTCGCCCAAATTAGTTTCCATAAAGTAACTTAAGTAAGGAGTTGAGAAAG
GGATCAGTCGCCCTTTTCCCCAAGGTGTAACTTTAAGGCGTAAGTTGGAT
GAAATTAGGAGGAAAAACTTGGAGAGATTTTTTAGAAATATGTGTTCTTT
ATCTTCTAAGAGATCTCACATGTTATGACCTTCAATTTTCTTATACAAAT
GATTCGTATATGATGAGTGTTGATGAGTGTTCTGATTTCTAAGAAGCCTT
TATCACACTATTTGTCTCCCTAAACTTTTTACTACTTTATAGTTGGATGT
GTTCTAAAATCTAGGAAATAAATTTTGCAAAGACATAATATTTGTTTTTT
TTTAGATATAGATATTTGTTTTTTTTCCACAAAAGATGTGTTCTGAAATT
TTTTAGGGTTACTAGGCAACAAGAACACATTTGACGACCTTGATTATACC
CCTGTCTCGTCAGAAAACATCATTATTTTTAGCTTATTATTTTAAGATCT
TATCAGAACAGATCAAAATTTCTAGCTGAAACGTACTCTCAGAACACATC
GGAAAAAAAGGTCACCTCGCCGACTCCTTTCGAATATCTACCTTCTTTTG
AAAAAAAAACAAAATATTTTAGAAGTTCTCTGACCTTCCCTGACCTACCT
ACCTACCAAAATGAAGCAAAACCTCC Coding sequence (CDS) from alignment at sc0000050:82991..91166- >TCONS_00005036 ID=TCONS_00005036|Name=TCONS_00005036|organism=Clytia hemisphaerica|type=CDS|length=8022bp|location=Sequence derived from alignment at sc0000050:82991..91166- (Clytia hemisphaerica) CATCTTATGTGACCTTAGCCATACTGGATAAAGAAGGAAAAAGACTTGAG AAAAGAAAAACGAATACATGTCCAGGGACACTTCAACCTGAATTTGACGA AGTTATAACTTTCTCTGTACCTGATGGATCGTTACTAGATACACAGATAT TAATCAAACTAAAGAGTAAAAGGTTTTTATTACCGAGTAAATTGATAGGA CAATTTATCATCACACCTGAATCTGAGAGTTGGAAGAAACTTTTAGAAGA CAATGCATTGAAAGCACGTTGGTTTCAAATGTACCATAAGCCGAGCAGTT GAGAAAAGGAAACGGGAGCAGTTTACTTATCCATGGAATTAGATCGAGAT ATTTGGGAATTGAAGATCGAAATCGAAGAAGCAGACATTCTGCCGGAAGA CGAAGATAAAGAAAAATGTAATTCAATCCTTCATTCGGGGATGGGTTCAC TTTTTGTATCCCTCAGAAAGAGGCCAAACAACAGAAACTGTGTTTGACGC AATATGAAAAGAATCGTTTCTCACAGAAGGATGGGATAGGTCAGATTGAA ATGGATTTGAAATCGGTTCTCACAACGAAAGAAGAAGAATATATCAAGAA ATTGTATCCGTACGATCCTCTCATAGGAGTGTGAAATTTTGACAGTGAAG GTGATCGAATCAAATGATATACCGGTCCGTGATTTGAGTGGTCACAGCTA CTCATTCGTTGAAGTCAAACTCCTCCCACTACACAAGGATTCGCCCATTG AATATAAAACCGCCCTTGTACGCCCTGCAACGAAGAAGTTGGCTCGATGA CATTTCGCTTGAAATATAATCAATCGACATAAGGCAAAGGAAATTGAAGG CAAAGCCAAGGAAATATGGTTACAAATCGAGACATTTTTCATCAATCTAT GGAATTGGTCTTTAAAACATAAAGAGATAGCTATCCCTGCTGCAGTTGGT ATTTTATTGGTCCTGGTTTTGTTCTTCTCGTGTTGTTGTTATTGTTGTTG CTGTCGCAAGAAGACTCGTAAGAAAATAAAAGAAAAGTTGAAAATGAAAG GAGTAAAGCCGAGCAAAATGTTGAGACGTATACAACCAGGGAAAAGGGTC AAAAGAGTCATGATGATGGCTGTTGAAAAACGAAGTGCTGTTGGAGCATC TTATGTGACCTTAGCCATACTGGATAAAGAAGGAAAAAGACTTGAGAAAA GAAAAACGAATACATGTCCAGGGACACTTCAACCTGAATTTGACGAAGTT ATAACTTTCTCTGTACCTGATGGATCGTTACTAGATACACAGATATTAAT CAAACTAAAGAGTAAAAGGTTTTTATTACCGAGTAAATTGATAGGACAAT TTATCATCACACCTGAATCTGAGAGTTGGAAGAAACTTTTAGAAGACAAT GCATTGAAAGCACGTTGGTTTCAAATGTACCATAAGCCGAGCAGTTGAGA AAAGGAAACGGGAGCAGTTTACTTATCCATGGAATTAGATCGAGATATTT GGGAATTGAAGATCGAAATCGAAGAAGCAGACATTCTGCCGGAAGACGAA GATAAAGAAAAATGTAATTCAATCCTTCATTCGGGGATGGGTTCACTTTT TGTATCCCTCAGAAAGAGGCCAAACAACAGAAACTGTGTTTGACGCAATA TGAAAAGAATCGTTTCTCACAGAAGGATGGGATAGGTCAGATTGAAATGG ATTTGAAATCGGTTCTCACAACGAAAGAAGAAGAATATATCAAGAAATTG TATCCGTACGATCCTCTCATAGGAGTGTGAAATTTTGACAGTGAAGGTGA TCGAATCAAATGATATACCGGTCCGTGATTTGAGTGGTCACAGCTACTCA TTCGTTGAAGTCAAACTCCTCCCACTACACAAGGATTCGCCCATTGAATA TAAAACCGCCCTTGTACGCCCTGCAACGAAGAAGTTGGCTCGATGACATT TCGCTTGAAATATAATCAATCGACATAAGGCAAAGGAAATTGAAGGCAAA GCCAAGGAAATATGGTTACAAATCGAGACATTTTTCATCAATCTATGGAA TTGGTCTTTAAAACATAAAGAGATAGCTATCCCTGCTGCAGTTGGTATTT TATTGGTCCTGGTTTTGTTCTTCTCGTGTTGTTGTTATTGTTGTTGCTGT CGCAAGAAGACTCGTAAGAAAATAAAAGAAAAGTTGAAAATGAAAGGAGT AAAGCCGAGCAAAATGTTGAGACGTATACAACCAGGGAAAAGGGTCAAAA GAGTCATGATGATGGCTGTTGAAAAACGAAGTGCTGTTGGAGCATCTTAT GTGACCTTAGCCATACTGGATAAAGAAGGAAAAAGACTTGAGAAAAGAAA AACGAATACATGTCCAGGGACACTTCAACCTGAATTTGACGAAGTTATAA CTTTCTCTGTACCTGATGGATCGTTACTAGATACACAGATATTAATCAAA CTAAAGAGTAAAAGGTTTTTATTACCGAGTAAATTGATAGGACAATTTAT CATCACACCTGAATCTGAGAGTTGGAAGAAACTTTTAGAAGACAATGCAT TGAAAGCACGTTGGTTTCAAATGTACCATAAGCCGAGCAGTTGAGAAAAG GAAACGGGAGCAGTTTACTTATCCATGGAATTAGATCGAGATATTTGGGA ATTGAAGATCGAAATCGAAGAAGCAGACATTCTGCCGGAAGACGAAGATA AAGAAAAATGTAATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTA TCCCTCAGAAAGAGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAA AAGAATCGTTTCTCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTT GAAATCGGTTCTCACAACGAAAGAAGAAGAATATATCAAGAAATTGTATC CGTACGATCCTCTCATAGGAGTGTGAAATTTTGACAGTGAAGGTGATCGA ATCAAATGATATACCGGTCCGTGATTTGAGTGGTCACAGCTACTCATTCG TTGAAGTCAAACTCCTCCCACTACACAAGGATTCGCCCATTGAATATAAA ACCGCCCTTGTACGCCCTGCAACGAAGAAGTTGGCTCGATGACATTTCGC TTGAAATATAATCAATCGACATAAGGCAAAGGAAATTGAAGGCAAAGCCA AGGAAATATGGTTACAAATCGAGACATTTTTCATCAATCTATGGAATTGG TCTTTAAAACATAAAGAGATAGCTATCCCTGCTGCAGTTGGTATTTTATT GGTCCTGGTTTTGTTCTTCTCGTGTTGTTGTTATTGTTGTTGCTGTCGCA AGAAGACTCGTAAGAAAATAAAAGAAAAGTTGAAAATGAAAGGAGTAAAG CCGAGCAAAATGTTGAGACGTATACAACCAGGGAAAAGGGTCAAAAGAGT CATGATGATGGCTGTTGAAAAACGAAGTGCTGTTGGAGCATCTTATGTGA CCTTAGCCATACTGGATAAAGAAGGAAAAAGACTTGAGAAAAGAAAAACG AATACATGTCCAGGGACACTTCAACCTGAATTTGACGAAGTTATAACTTT CTCTGTACCTGATGGATCGTTACTAGATACACAGATATTAATCAAACTAA AGAGTAAAAGGTTTTTATTACCGAGTAAATTGATAGGACAATTTATCATC ACACCTGAATCTGAGAGTTGGAAGAAACTTTTAGAAGACAATGCATTGAA AGCACGTTGGTTTCAAATGTACCATAAGCCGAGCAGTTGAGAAAAGGAAA CGGGAGCAGTTTACTTATCCATGGAATTAGATCGAGATATTTGGGAATTG AAGATCGAAATCGAAGAAGCAGACATTCTGCCGGAAGACGAAGATAAAGA AAAATGTAATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTATCCC TCAGAAAGAGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAAAAGA ATCGTTTCTCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTTGAAA TCGGTTCTCACAACGAAAGAAGAAGAATATATCAAGAAATTGTATCCGTA CGATCCTCTCATAGGAGTGTGAAATTTTGACAGTGAAGGTGATCGAATCA AATGATATACCGGTCCGTGATTTGAGTGGTCACAGCTACTCATTCGTTGA AGTCAAACTCCTCCCACTACACAAGGATTCGCCCATTGAATATAAAACCG CCCTTGTACGCCCTGCAACGAAGAAGTTGGCTCGATGACATTTCGCTTGA AATATAATCAATCGACATAAGGCAAAGGAAATTGAAGGCAAAGCCAAGGA AATATGGTTACAAATCGAGACATTTTTCATCAATCTATGGAATTGGTCTT TAAAACATAAAGAGATAGCTATCCCTGCTGCAGTTGGTATTTTATTGGTC CTGGTTTTGTTCTTCTCGTGTTGTTGTTATTGTTGTTGCTGTCGCAAGAA GACTCGTAAGAAAATAAAAGAAAAGTTGAAAATGAAAGGAGTAAAGCCGA GCAAAATGTTGAGACGTATACAACCAGGGAAAAGGGTCAAAAGAGTCATG ATGATGGCTGTTGAAAAACGAAGTGCTGTTGGAGCATCTTATGTGACCTT AGCCATACTGGATAAAGAAGGAAAAAGACTTGAGAAAAGAAAAACGAATA CATGTCCAGGGACACTTCAACCTGAATTTGACGAAGTTATAACTTTCTCT GTACCTGATGGATCGTTACTAGATACACAGATATTAATCAAACTAAAGAG TAAAAGGTTTTTATTACCGAGTAAATTGATAGGACAATTTATCATCACAC CTGAATCTGAGAGTTGGAAGAAACTTTTAGAAGACAATGCATTGAAAGCA CGTTGGTTTCAAATGTACCATAAGCCGAGCAGTTGAGAAAAGGAAACGGG AGCAGTTTACTTATCCATGGAATTAGATCGAGATATTTGGGAATTGAAGA TCGAAATCGAAGAAGCAGACATTCTGCCGGAAGACGAAGATAAAGAAAAA TGTAATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTATCCCTCAG AAAGAGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAAAAGAATCG TTTCTCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTTGAAATCGG TTCTCACAACGAAAGAAGAAGAATATATCAAGAAATTGTATCCGTACGAT CCTCTCATAGGAGTGTGAAATTTTGACAGTGAAGGTGATCGAATCAAATG ATATACCGGTCCGTGATTTGAGTGGTCACAGCTACTCATTCGTTGAAGTC AAACTCCTCCCACTACACAAGGATTCGCCCATTGAATATAAAACCGCCCT TGTACGCCCTGCAACGAAGAAGTTGGCTCGATGACATTTCGCTTGAAATA TAATCAATCGACATAAGGCAAAGGAAATTGAAGGCAAAGCCAAGGAAATA TGGTTACAAATCGAGACATTTTTCATCAATCTATGGAATTGGTCTTTAAA ACATAAAGAGATAGCTATCCCTGCTGCAGTTGGTATTTTATTGGTCCTGG TTTTGTTCTTCTCGTGTTGTTGTTATTGTTGTTGCTGTCGCAAGAAGACT CGTAAGAAAATAAAAGAAAAGTTGAAAATGAAAGGAGTAAAGCCGAGCAA AATGTTGAGACGTATACAACCAGGGAAAAGGGTCAAAAGAGTCATGATGA TGGCTGTTGAAAAACGAAGTGCTGTTGGAGCATCTTATGTGACCTTAGCC ATACTGGATAAAGAAGGAAAAAGACTTGAGAAAAGAAAAACGAATACATG TCCAGGGACACTTCAACCTGAATTTGACGAAGTTATAACTTTCTCTGTAC CTGATGGATCGTTACTAGATACACAGATATTAATCAAACTAAAGAGTAAA AGGTTTTTATTACCGAGTAAATTGATAGGACAATTTATCATCACACCTGA ATCTGAGAGTTGGAAGAAACTTTTAGAAGACAATGCATTGAAAGCACGTT GGTTTCAAATGTACCATAAGCCGAGCAGTTGAGAAAAGGAAACGGGAGCA GTTTACTTATCCATGGAATTAGATCGAGATATTTGGGAATTGAAGATCGA AATCGAAGAAGCAGACATTCTGCCGGAAGACGAAGATAAAGAAAAATGTA ATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTATCCCTCAGAAAG AGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAAAAGAATCGTTTC TCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTTGAAATCGGTTCT CACAACGAAAGAAGAAGAATATATCAAGAAATTGTATCCGTACGATCCTC TCATAGGAGTGTGAAATTTTGACAGTGAAGGTGATCGAATCAAATGATAT ACCGGTCCGTGATTTGAGTGGTCACAGCTACTCATTCGTTGAAGTCAAAC TCCTCCCACTACACAAGGATTCGCCCATTGAATATAAAACCGCCCTTGTA CGCCCTGCAACGAAGAAGTTGGCTCGATGACATTTCGCTTGAAATATAAT CAATCGACATAAGGCAAAGGAAATTGAAGGCAAAGCCAAGGAAATATGGT TACAAATCGAGACATTTTTCATCAATCTATGGAATTGGTCTTTAAAACAT AAAGAGATAGCTATCCCTGCTGCAGTTGGTATTTTATTGGTCCTGGTTTT GTTCTTCTCGTGTTGTTGTTATTGTTGTTGCTGTCGCAAGAAGACTCGTA AGAAAATAAAAGAAAAGTTGAAAATGAAAGGAGTAAAGCCGAGCAAAATG TTGAGACGTATACAACCAGGGAAAAGGGTCAAAAGAGTCATGATGATGGC TGTTGAAAAACGAAGTGCTGTTGGAGCATCTTATGTGACCTTAGCCATAC TGGATAAAGAAGGAAAAAGACTTGAGAAAAGAAAAACGAATACATGTCCA GGGACACTTCAACCTGAATTTGACGAAGTTATAACTTTCTCTGTACCTGA TGGATCGTTACTAGATACACAGATATTAATCAAACTAAAGAGTAAAAGGT TTTTATTACCGAGTAAATTGATAGGACAATTTATCATCACACCTGAATCT GAGAGTTGGAAGAAACTTTTAGAAGACAATGCATTGAAAGCACGTTGGTT TCAAATGTACCATAAGCCGAGCAGTTGAGAAAAGGAAACGGGAGCAGTTT ACTTATCCATGGAATTAGATCGAGATATTTGGGAATTGAAGATCGAAATC GAAGAAGCAGACATTCTGCCGGAAGACGAAGATAAAGAAAAATGTAATTC AATCCTTCATTCGGGGATGGGTTCACTTTTTGTATCCCTCAGAAAGAGGC CAAACAACAGAAACTGTGTTTGACGCAATATGAAAAGAATCGTTTCTCAC AGAAGGATGGGATAGGTCAGATTGAAATGGATTTGAAATCGGTTCTCACA ACGAAAGAAGAAGAATATATCAAGAAATTGTATCCGTACGATCCTCTCAT AGGAGTGTGAAATTTTGACAGTGAAGGTGATCGAATCAAATGATATACCG GTCCGTGATTTGAGTGGTCACAGCTACTCATTCGTTGAAGTCAAACTCCT CCCACTACACAAGGATTCGCCCATTGAATATAAAACCGCCCTTGTACGCC CTGCAACGAAGAAGTTGGCTCGATGACATTTCGCTTGAAATATAATCAAT CGACATAAGGCAAAGGAAATTGAAGGCAAAGCCAAGGAAATATGGTTACA AATCGAGACATTTTTCATCAATCTATGGAATTGGTCTTTAAAACATAAAG AGATAGCTATCCCTGCTGCAGTTGGTATTTTATTGGTCCTGGTTTTGTTC TTCTCGTGTTGTTGTTATTGTTGTTGCTGTCGCAAGAAGACTCGTAAGAA AATAAAAGAAAAGTTGAAAATGAAAGGAGTAAAGCCGAGCAAAATGTTGA GACGTATACAACCAGGGAAAAGGGTCAAAAGAGTCATGATGATGGCTGTT GAAAAACGAAGTGCTGTTGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00005036-exon-sc0000050-1575043694:90946..91166 | TCONS_00005036-exon-sc0000050-1575043694:90946..91166 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1575043694:89147..89430 | TCONS_00005036-exon-sc0000050-1575043694:89147..89430 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1575043694:88581..88627 | TCONS_00005036-exon-sc0000050-1575043694:88581..88627 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1575043694:88241..88390 | TCONS_00005036-exon-sc0000050-1575043694:88241..88390 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1575043694:87544..87754 | TCONS_00005036-exon-sc0000050-1575043694:87544..87754 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1575043694:86924..87041 | TCONS_00005036-exon-sc0000050-1575043694:86924..87041 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1575043694:82991..84651 | TCONS_00005036-exon-sc0000050-1575043694:82991..84651 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:90946..91166 | TCONS_00005036-exon-sc0000050-1510915933:90946..91166 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:89147..89430 | TCONS_00005036-exon-sc0000050-1510915933:89147..89430 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:88581..88627 | TCONS_00005036-exon-sc0000050-1510915933:88581..88627 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:88241..88390 | TCONS_00005036-exon-sc0000050-1510915933:88241..88390 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:87544..87754 | TCONS_00005036-exon-sc0000050-1510915933:87544..87754 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:86924..87041 | TCONS_00005036-exon-sc0000050-1510915933:86924..87041 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1510915933:82991..84651 | TCONS_00005036-exon-sc0000050-1510915933:82991..84651 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:90946..91166 | TCONS_00005036-exon-sc0000050-1491911889:90946..91166 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:89147..89430 | TCONS_00005036-exon-sc0000050-1491911889:89147..89430 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:88581..88627 | TCONS_00005036-exon-sc0000050-1491911889:88581..88627 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:88241..88390 | TCONS_00005036-exon-sc0000050-1491911889:88241..88390 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:87544..87754 | TCONS_00005036-exon-sc0000050-1491911889:87544..87754 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:86924..87041 | TCONS_00005036-exon-sc0000050-1491911889:86924..87041 | Clytia hemisphaerica | exon |
TCONS_00005036-exon-sc0000050-1491911889:82991..84651 | TCONS_00005036-exon-sc0000050-1491911889:82991..84651 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000050 | supercontig | sc0000050:82991..91166 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
cellular_component |
GO:0016020 |
membrane |
Blast
BLAST of TCONS_00005036 vs. Swiss-Prot (Human)
Match: SYT7 (Synaptotagmin-7 OS=Homo sapiens GN=SYT7 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 1.400e-20 Identity = 80/276 (28.99%), Postives = 136/276 (49.28%), Query Frame = 2
Query: 506 EEVGSMTFRLKYNQSTEILTVKVIESNDIPVRDLSGHSYSFVEVKLLPLHKDSPIEYKTALVRPATFNPSFGDGFTF-CIPQKEAKQQKLCLTQYEKNRFSQKDGIGQIEMDLKSVLTTKEEEYIKKLYPYDPLIGVEKETGAVYLSMELDRDIWELKIEIEEADILPEDEDKEKCTSYVTLAILDKEGKRLEKRKTNTCPGTLQPEFDEVITFSVPDGSLLDTQILIKLKSKRFLLPSKLIGQFIIT-----PESESWKKLL-EDNALKARWFQM 1312
E +G + F + YN LTVK++++ ++P +D SG S FV++ LLP K +E K V+ NP + + F F P ++ Q+ L L + +RFS+ D IG++ + L V T+ + + K L P G G + LS+ + + + I +A L + YV + ++ K+ KR+EK+KT T L P F+E F +P L +T I+I + K L + +IG+ ++ E + WK ++ A+W Q+
Sbjct: 134 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLP-DKKHKLETK---VKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPCSDGSG---SRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKD-KRVEKKKTVTMKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQL 401
The following BLAST results are available for this feature:
|