XLOC_002851 (gene) - C. hemisphaerica

Overview
NameXLOC_002851
Unique NameXLOC_002851
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000050:82991..91166-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002851 ID=XLOC_002851|Name=XLOC_002851|organism=Clytia hemisphaerica|type=gene|length=8176bp|location=Sequence derived from alignment at sc0000050:82991..91166- (Clytia hemisphaerica)
TTTTTATATTAGCTTGAAAGCATGATTAAGATTGATGATAGTGTTTTGAG
AGATCTTTTTGATGTTTTGTTTATATTTTCAGTAGCAAAAAATGTGACTT
TTGAGCCAGGCACAAGAGCCGTTTAAATGTCTAGAAAAACACATGAAAGA
TTTTTGACTGGTTGATTCTTAATTTCTTGGCAACAAAATGATGGCTGTTG
AAAAACGAAGTGCTGTTGGAGGTTTGCTTTTGTTTTGTTTTTGTTTTGTT
AATCTACACAATTGACAGCTCCAGGCTTTTAGGCCTTACGAGATTTACGC
GGAAACGAATGGAAATATGGCGTAGCCTAACCTTTTGTTTCATATACACT
ATTTGACCCTGGTCAAATTACAGTACCAGATAAAACTGAACTTAGATAGT
ATTGATTTTTGTGTAGAATTTTAGGGTTCGTTTATTTCCAAGTTCATCCT
CTTATAAGACACAATGCTTTAAGATTACTACACTTTTTTATATAAGAACA
ATTTTATAAGAACAATGAGGCTCAAAATCGCCAAAAAATAAGAACAATTT
TAAGGACAATGCTGAGACTGAAATTNGCTTGATTCATCTCATCTACGGAA
CATCTCTCGATTGACTGATCTTTTTCTTATTTTGTTTCGCATTGCGTGAC
TTCGCCAATTGGACTGACTTGATTAATTTCTTCTCATTTATTTTCTCATG
TAGTTTTTTATAAAAAGACGTACCTTAAAGGGAGAAATTTTGGCGGGAAG
AACATTTGGCGGATTTGGTCAAAATCCGCCGAATTAAGTTCCCGCCAAAT
TTAAGTTGCTCTATTTATTCCCCCAAATGTNCCTCTATTACACCCTGTAA
ATAAGAACAGGTTAAGAATAATTTGAGGCTCAAAGTGCTAAAAAAATAAG
AACAGCCGAGCCTCAGGAAAATTTTACTGGTTCTTATAAAAAAGTGTATC
TTGGTATAAACTTTCATTGAGAAAATGATAGCTAGCTAGCACCAGGTTCT
TTATTACTCTTGTCTCCCGAATAGACGCCCCCCCCTCCCGCTAATTGTTG
AGAGAAAAAAAATCCATCCCCCCGCTCTTATTAAGACCCCCCCGCTAATC
AAATTCGAATAATTCAATATCTTATTACAGTGTAGATGGACCTTAAACTT
GTTAATATTTTCCTTTTTGTTAGTATTGGTTCTTATTTTACGTGTTTATT
TGCAGAAGTTTCTTTTTTGTTGTTGAAATTGATATCAGTTAAAAAAAATT
CAGTCTTCAAATTACCCCTCCCCTCTTATTCCATTCTTATATTGATTCTG
GTATCGTAAAGTTTTACTCAAGATACGTTGATGATACACTCCTTGTCATT
CGTCCAGTAGATATCGATAAAGTTCATTGCTCCCTTAACAAATTTGATAA
AAATCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATTCGGGAG
ACAAGAGTACAATCCTGGACAAAACTGTGTGTCCACCCCCTCCCTCTCTC
AATATCAATGTCTCGGAGTCTTGTGAACGTGTGACAAATATTTAAATCCA
ATATTGATTTTTTTTTGGGGGGGGGGACTTTCCTGTGGGAAAGGGACACC
AGTATTGACCACGATTTCAGTTTGGTTTGTTGAAGCAAACACTAAGACTT
AATCACTGTAAGTCATGTTGTTTTGATAATTTTCAGATAAGGCAAAGGAA
ATTGAAGGCAAAGCCAAGGAAATATGGTTACAAATCGAGACATTTTTCAT
CAATCTATGGAATTGGTCTTTAAAACATAAAGAGATAGCTATCCCTGCTG
CAGTTGGTATTTTATTGGTCCTGGTTTTGTTCTTCTCGTGTTGTTGTTAT
TGTTGTTGCTGTCGCAAGAAGACTCGTAAGAAAATAAAAGAAAAGTTGAA
AATGAAAGGAGTAAAGCCGAGCAAAATGTTGAGACGTATACAACCAGGGA
AAAGGGTCAAAAGAGTCATGGTAATTGTTTGTTTTAGGCCTTTTATTCAT
TTATTGATTATAAATTTGTAAAAACAAAGTGATATACCTTATTACACAAA
TATTACTAGGCAAGTATTTAACGCTCTTGAAATTTGCACGATCTGAAATT
AACACGAATTGTTCTGATTTTTCAAGGAAACGGTGGCTGGTTTTAATTAA
GGGGATTTTTATTAGCACGAAATTTTTCAATTATATGACATAATAAAATG
ACTAGTAATATCCGTGTAATTAGATATGCGATATGCCTCGACGAAGACGG
ATTCATCATTTTCCAAAATGTTGGCCCCCAAGTGTTGGCCCCCTCACTCA
AAATGGCTCGCCGGGGCCCATGTTCATACATCTGATCTGCGACCCATGTA
TCCCCTGTTGTTAAAACGCTAGTTTGTACAAAGATTATTTCAAATTTTTC
AGAAAAAAAAAATTCGTCCTCTGTTGCCAAACTTTTTTTAATCCAAACAA
TTAATTATAACTAATTTTCAATTCGATTAAATCTTTCAGGAAGAAGTTGG
CTCGATGACATTTCGCTTGAAATATAATCAATCGACGTAAGTTCAATTCT
TGTTTAAAGATTCTCATATAAGCCATTGGGTCAGGCTTCCCTTGTTTTTA
ATTGCAACGATGCCATGGTAGATTCTAAATATTAACAACGCTTTGCTTTC
ACAAATTCTAAGGATAATACCAGCAATAAATCCTAGTAAAACAAAATTTC
CCGCATATCGTATTTCTCTTTCTCAGTGAAATTTTGACAGTGAAGGTGAT
CGAATCAAATGATATACCGGTCCGTGATTTGAGTGGTCACAGCTACTCAT
TCGTTGAAGTCAAACTCCTCCCACTACACAAGGATTCGCCCATTGAATAT
AAAACCGCCCTTGTACGCCCTGCAACATTCAATCCTTCATTCGGGGATGG
GTTCACTTTTTGTATCCCTCAGAAAGAGNATTTTTGGTTTACATTATGAA
AAGAAGATTCGGCCTTCAAGTATGTTAAAATTAATGAACCTTAGTGCTGA
GGAATCGTAGAACGTTTTTTCTCCTATGTAATTTTGAACGGGTTTAATAT
AAAGATGGCTCTTTCTTTAGATTTATTTTTGATATTTTCCTTTCATTTCA
GCATCTTATGTGACCTTAGCCATACTGGATAAAGAAGGAAAAAGACTTGA
GAAAAGAAAAACGAATACATGTCCAGGGACACTTCAACCTGAATTTGACG
AAGTTATAACTTTCTCTGTACCTGATGGATCGTTACTGGATACACAGATA
TTAATCAAACTAAAGAGTAAAAGGTTTTTATTACCGAGTAAATTGATAGG
ACAATTTATCATCACACCTGAATCTGAGAGTTGGAAGAAACTTTTAGAAG
ACAATGCANGACATTCAATCCTTCATTCGGGGATGGGTTCACTTTTTGTA
TCCCTCAGAAAGAGGCCAAACAACAGAAACTGTGTTTGACGCAATATGAA
AAGAATCGTTTCTCACAGAAGGATGGGATAGGTCAGATTGAAATGGATTT
GAAATCGGTTCTCACAACGAAAGAAGAAGAATATATCAAGAAATTGTATC
CGTACGATCCTCTCATAGGAGTGGTATGTAACTCAACTTTTTCCAATTCA
AATTTATCTTTCACGCTTGTTTTTTTAATATCACTGATACGTCATGGCTC
TGTTGTCTCGTGAGCACATGGTTAACGCTGTCTGGTATATGCTATGATTT
CCCTTATCCTAGAAAGGATAACTATTCTGGGTTAGTGCCCATTCCGTTCA
CATTGGAGAGATCATCTTTCCTGCCTTCCTACTTTCCTCCCCCTGAATAT
CCGTCGTAATTGGTCGAAAAACAACGTTTTAATTTCCTTTACTTCTAAAC
GCTGCCCTCAATTTTAACTGTCCCATCTAGAAGTATAAGATAAACACTTT
CGAAAGCACACACGTTTAGAATTTTTCATCGTTTTGTGTCTTTTAATGAT
GATCCAGGATAATCATGTTGTGCTTGCGTTGAAAGTTGTGTTAAGAATTA
CCGTCTCAAAATTCTAAAAATTTGGGAGAATTTGTCGTGAATTGATGTTT
TTAAGTTTTTCGGTCAATCTTTCAGGAAAAGGAAACGGGAGCAGTTTACT
TATCCATGGAATTAGATCGAGATATTTGGGAATTGAAGATCGAAATCGAA
GAAGCAGACATTCTGCCGGAAGACGAAGATAAAGAAAAATGTAGTAAGAT
TCTAAGTGTCTTTAGCTCGTTTAATTAATTTCACCTTGCTTGATTGATTA
ATTGTCTTTTGTAGAAATTTGCTTTAGTATTAACACCTTTGTCCCAGTTT
AATCACCTTGTAAATTACTCTTAGGTCCCAAATAAACGGGGGGGTGCTCA
AATAAACAGGGGTGTTGGAAAATTTTCGAGATTTTAAAAAACGGGGGGGG
GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGAGGACCTAGTAAGGTCCAGGGGGTTGGAAAATTTTCGGAAAATTAA
CAAGCGGGGAGGCCCGTTTATTTGGCACCTAAGAGTAAGGCTCATTTTTG
GTTTACATTATGAAAAGAAGATTCGGCCTTCAAGTATGTTAAAATTAATG
AACCTTAGTGCTGAGGAATCGTAGAACGTTTTTTCTCCTATGTAATTTTG
AACGGGTTTAATATAAAGATGGCTCTTTCTTTAGATTTATTTTTGATATT
TTCCTTTCATTTCAGCATCTTATGTGACCTTAGCCATACTGGATAAAGAA
GGAAAAAGACTTGAGAAAAGAAAAACGAATACATGTCCAGGGACACTTCA
ACCTGAATTTGACGAAGTTATAACTTTCTCTGTACCTGATGGATCGTTAC
TAGATACACAGATATTAATCAAACTAAAGAGTAAAAGGTTTTTATTACCG
AGTAAATTGATAGGACAATTTATCATCACACCTGAATCTGAGAGTTGGAA
GAAACTTTTAGAAGACAATGCATTGAAAGCACGTTGGTTTCAAATGTACC
ATAAGCCGAGCAGTTGATGGTTTGGAAGAGCTTAGTAAAAAGAAGTTTGG
AATAATGCTCTGGTTGTGTTTAACTGTGAGATATGGGATACCAGCCGTTC
CCTTTCCCTATGTTCATCCTTCAATTTGAAGACATTTATTGACTCGTATC
GGAGAAATATTAGGAAACCACATGTAGAAAATAATTTAAGAAGAACCTAT
TTCAGCCCTGGTCTAACGTCTCCAGTTATTAAATGGTATAATGTGAAGGG
TATGAATCATTGGACTTTTGGGAAAAATATGAAATGTTTAGTTTTACCAG
ACGTCGTCATATTCTACCAAAGTGATCAACGATTAGTAGGCAGATATATT
TCATTTCGTCGTTGATTCCAATTCATCTTCCAATGTTGGTTGTGGTTTAT
CCTATGATAAACGATGATGAATCTTTTAAGTTGCCGGGTATCATCCCGGG
GGGTACTTAGCCAAATGGAGGGTATGGTATGTGCCGCCCTTAAGGGCACC
TTTTTTGGATTTCCAAATTTCAAATTTCAGTCCCACTAAGGGTGGGACTT
TTTACCCCCGGAAAGATCGTCTTGTTATAGTAACTCACGTAGAGGGAACT
AATCTTAGCGATTTTTCAGTTAAAAAAGAACAAATTTACCTTCCTGCCAC
TGGCCAAGGTTGGTTCTCACAAAAATGTAAAAAAAGTTGGATTTTTGCTG
CTCGCCCAAATTAGTTTCCATAAAGTAACTTAAGTAAGGAGTTGAGAAAG
GGATCAGTCGCCCTTTTCCCCAAGGTGTAACTTTAAGGCGTAAGTTGGAT
GAAATTAGGAGGAAAAACTTGGAGAGATTTTTTAGAAATATGTGTTCTTT
ATCTTCTAAGAGATCTCACATGTTATGACCTTCAATTTTCTTATACAAAT
GATTCGTATATGATGAGTGTTGATGAGTGTTCTGATTTCTAAGAAGCCTT
TATCACACTATTTGTCTCCCTAAACTTTTTACTACTTTATAGTTGGATGT
GTTCTAAAATCTAGGAAATAAATTTTGCAAAGACATAATATTTGTTTTTT
TTTAGATATAGATATTTGTTTTTTTTCCACAAAAGATGTGTTCTGAAATT
TTTTAGGGTTACTAGGCAACAAGAACACATTTGACGACCTTGATTATACC
CCTGTCTCGTCAGAAAACATCATTATTTTTAGCTTATTATTTTAAGATCT
TATCAGAACAGATCAAAATTTCTAGCTGAAACGTACTCTCAGAACACATC
GGAAAAAAAGGTCACCTCGCCGACTCCTTTCGAATATCTACCTTCTTTTG
AAAAAAAAACAAAATATTTTAGAAGTTCTCTGACCTTCCCTGACCTACCT
ACCTACCAAAATGAAGCAAAACCTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005036TCONS_00005036Clytia hemisphaericatranscript
TCONS_00005035TCONS_00005035Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005036-proteinTCONS_00005036-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:82991..91166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.26	8.62	3.95	3.84	79.51	58.65	32.03	33.34	14.15	17.4	13.88	12.64	10.93	10.82	5.93	4.69	9.4	10.46	10.26	9.94	15.43	13.91	14.93	14.62	10.52	10.91	5.13	4.74	6.84	8.47