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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004947 ID=TCONS_00004947|Name=TCONS_00004947|organism=Clytia hemisphaerica|type=transcript|length=1064bp
gCTTCGGCTAAAATCTGCTCTCTATTAAGTTCAAAACATGTGGTAACCGC
TTTACCAAAACTATCAGCTGATTATCATTCGGTTATGATTTCTCTTACGT
CCTGTATCCTGTATCCTGTATTCCTTCTCTGTATTTACCGAGAGTTTTAC
GCCAGAATTTTTAATCATACATAACTTTAAGAACGAAACAAAGAAGCTAC
AGCGGCGGTAAAACTTCAAAGGGAGATTCCACAATTGTATTCAGACACTT
AGAGAGCGCTCAACAAGCCAAATAGTAAAAGGGTAGTTTTGTTATTTCTA
AGTCAGATATTTGCGGAAGCAAAGTTTTTGGGGTTTGATGACGTCACGAC
TTTTTGGCACGAGCCGAGACGCGaatcagaaagaaaaaaaagaaaatctg
tcttgttcagtttttaaataattttgttaaaaatttttcttttatttcca
TTCTAAACATAAAAATCTTAGCTTATCACAATCTCTTTAATTTACAAAAG
GGCAATATTTTATAAGTTTATCCCCCTACGCTTTTTgctttaaaataaat
aaataaaaggtAATATGTTATCTTTCTGAtgaaataataatttaaaaGCG
ATGAAAAATTATAATACACAGAGGAGACTAATCAactaaataatttcttt
atgatttattccaaataaatttatcttattttatatttcttaaaattatt
GCTTTTATCTTGATGGTACTAGAAGTTCTTAAGTTAGAAAAACGTCGGCC
AAGATAAGCCTCCCAGGAACTCAATGAAATTCGGTGGAGATAAGAAAAAG
TCCAAGGAAAAGATCTAATGGATAAAAATCTGTCCCTCCTTCCTTTGAAg
ccagtttgaaattttccatttaGTTTAGAGAATCTGAGAGAACAGGTAAC
TTATCCAGgaaataaaaaactaaattGAGCAGTGCCAAATTTCCCCCAAA
CCTTAATCCAATCCTATTGTGGGTTGATTAGTGGGTGTATTTCAGtaccc
agacggcacacaacgtcaaaacaacgtccatgtaacattcataacgtcca
aataacgttatttg Run BLAST on NCBI transcript from alignment at sc0000049:22316..23379 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004947 ID=TCONS_00004947|Name=TCONS_00004947|organism=Clytia hemisphaerica|type=transcript|length=1064bp|location=Sequence derived from alignment at sc0000049:22316..23379 (Clytia hemisphaerica)
caaataacgttatttggacgttatgaatgttacatggacgttgttttgac
gttgtgtgccgtctgggtaCTGAAATACACCCACTAATCAACCCACAATA
GGATTGGATTAAGGTTTGGGGGAAATTTGGCACTGCTCaatttagttttt
tatttcCTGGATAAGTTACCTGTTCTCTCAGATTCTCTAAACtaaatgga
aaatttcaaactggcTTCAAAGGAAGGAGGGACAGATTTTTATCCATTAG
ATCTTTTCCTTGGACTTTTTCTTATCTCCACCGAATTTCATTGAGTTCCT
GGGAGGCTTATCTTGGCCGACGTTTTTCTAACTTAAGAACTTCTAGTACC
ATCAAGATAAAAGCaataattttaagaaatataaaataagataaatttat
ttggaataaatcataaagaaattatttagtTGATTAGTCTCCTCTGTGTA
TTATAATTTTTCATCGCttttaaattattatttcaTCAGAAAGATAACAT
ATTaccttttatttatttattttaaagcAAAAAGCGTAGGGGGATAAACT
TATAAAATATTGCCCTTTTGTAAATTAAAGAGATTGTGATAAGCTAAGAT
TTTTATGTTTAGAAtggaaataaaagaaaaatttttaacaaaattattta
aaaactgaacaagacagattttcttttttttctttctgattCGCGTCTCG
GCTCGTGCCAAAAAGTCGTGACGTCATCAAACCCCAAAAACTTTGCTTCC
GCAAATATCTGACTTAGAAATAACAAAACTACCCTTTTACTATTTGGCTT
GTTGAGCGCTCTCTAAGTGTCTGAATACAATTGTGGAATCTCCCTTTGAA
GTTTTACCGCCGCTGTAGCTTCTTTGTTTCGTTCTTAAAGTTATGTATGA
TTAAAAATTCTGGCGTAAAACTCTCGGTAAATACAGAGAAGGAATACAGG
ATACAGGATACAGGACGTAAGAGAAATCATAACCGAATGATAATCAGCTG
ATAGTTTTGGTAAAGCGGTTACCACATGTTTTGAACTTAATAGAGAGCAG
ATTTTAGCCGAAGc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004947-exon-sc0000049-1491911889:22316..23379 | TCONS_00004947-exon-sc0000049-1491911889:22316..23379 | Clytia hemisphaerica | exon |
| TCONS_00004947-exon-sc0000049-1510915933:22316..23379 | TCONS_00004947-exon-sc0000049-1510915933:22316..23379 | Clytia hemisphaerica | exon |
| TCONS_00004947-exon-sc0000049-1575043694:22316..23379 | TCONS_00004947-exon-sc0000049-1575043694:22316..23379 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049 | supercontig | sc0000049:22316..23379 . |
Blast
The following BLAST results are available for this feature:
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