TCONS_00004820 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004820
Unique NameTCONS_00004820
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004820 ID=TCONS_00004820|Name=TCONS_00004820|organism=Clytia hemisphaerica|type=transcript|length=186bp
ataagcatatttgaatatctttccaacgatacaaactttttttattatac
gACACATGCTTGTATAGTTATGGCCGCAAATAAAACACTgcacatctttt
tgaaaaacaggCTTTAATATTATGGTGTTGCAATTATCATCCTATCATAG
TATATTACTATAGTACGTGTTTGTAcactctttttt
Run BLAST on NCBI

transcript from alignment at sc0000048:584436..584621

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004820 ID=TCONS_00004820|Name=TCONS_00004820|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at sc0000048:584436..584621 (Clytia hemisphaerica)
aaaaaagagtgTACAAACACGTACTATAGTAATATACTATGATAGGATGA
TAATTGCAACACCATAATATTAAAGcctgtttttcaaaaagatgtgcAGT
GTTTTATTTGCGGCCATAACTATACAAGCATGTGTcgtataataaaaaaa
gtttgtatcgttggaaagatattcaaatatgcttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002729XLOC_002729Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004820-exon-sc0000048-1491911889:584436..584621TCONS_00004820-exon-sc0000048-1491911889:584436..584621Clytia hemisphaericaexon
TCONS_00004820-exon-sc0000048-1510915933:584436..584621TCONS_00004820-exon-sc0000048-1510915933:584436..584621Clytia hemisphaericaexon
TCONS_00004820-exon-sc0000048-1575043694:584436..584621TCONS_00004820-exon-sc0000048-1575043694:584436..584621Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:584436..584621 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004820 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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