TCONS_00004814 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004814
Unique NameTCONS_00004814
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004814 ID=TCONS_00004814|Name=TCONS_00004814|organism=Clytia hemisphaerica|type=transcript|length=293bp
AAGCTTTCAGTTAATATAAAGAAAAGTGGAAGGTACAGTGATAGGTATGT
TAACAGGATTAGTACAGTGTGAATTGCTAACAGTGATTCATGTGATGCAA
TATAACTCAATCCCATACCAGACATAATAGAAAATTAATTAGAATCAGAT
TTTACAATCAATAGCAAACAGTGCTTACTGCTGACTTGCTGTTCCTTGGT
TTACATATAAATGATGGTATTTAGAAATCAAGATTGTGTTTAACTCACAG
CAGATGGAAAGTTGGTAAAAAGGCTGCACAGTAACCGCACAGT
Run BLAST on NCBI

transcript from alignment at sc0000048:265525..265817

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004814 ID=TCONS_00004814|Name=TCONS_00004814|organism=Clytia hemisphaerica|type=transcript|length=293bp|location=Sequence derived from alignment at sc0000048:265525..265817 (Clytia hemisphaerica)
ACTGTGCGGTTACTGTGCAGCCTTTTTACCAACTTTCCATCTGCTGTGAG
TTAAACACAATCTTGATTTCTAAATACCATCATTTATATGTAAACCAAGG
AACAGCAAGTCAGCAGTAAGCACTGTTTGCTATTGATTGTAAAATCTGAT
TCTAATTAATTTTCTATTATGTCTGGTATGGGATTGAGTTATATTGCATC
ACATGAATCACTGTTAGCAATTCACACTGTACTAATCCTGTTAACATACC
TATCACTGTACCTTCCACTTTTCTTTATATTAACTGAAAGCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002723XLOC_002723Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004814-exon-sc0000048-1491911889:265525..265817TCONS_00004814-exon-sc0000048-1491911889:265525..265817Clytia hemisphaericaexon
TCONS_00004814-exon-sc0000048-1510915933:265525..265817TCONS_00004814-exon-sc0000048-1510915933:265525..265817Clytia hemisphaericaexon
TCONS_00004814-exon-sc0000048-1575043694:265525..265817TCONS_00004814-exon-sc0000048-1575043694:265525..265817Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:265525..265817 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004814 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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