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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004770 ID=TCONS_00004770|Name=TCONS_00004770|organism=Clytia hemisphaerica|type=transcript|length=1855bp
GTTTTACAATATTTTGCAATTTCAAGGGTAAAAACTGCTAAACTTGGAGC
AGTAGTTTGAAAATTAATACTTCATTGGTTAATTTATATTTCTATTTGTA
GGAATGGAAGTCGAATCTGCAGGTGAAAATGCAGATCTGGATAATGAACT
CATGCAAAAACTGAACACCCTTGGAACTCGAGATAAAGAGGACCTTGTAA
ATCAATTTCAAAGCATTGTTGGTGGTCAATTAACAAGAGGATGTTGCTCA
TTTTATCTCGACATGGGAAATTGACTGCACTTGGAGCCTATTATGATGTG
ATGAGTTCTTCTGAGGATTTGCCTCTCTTTGAAGTGACGGATGAAAGTTG
TCATATTAGAGAAAGCTCTATTCGACCTGGTCAATCATTTATCAAAACAT
GGAGATTGCGGAATATAGgtGCTACAGTTTGGCCTAATaatctaaaattg
aaattcacgGGTGGTACGAATTTCGGTCATGGAGAATGTGCATCCTTGCC
ACCATTAAGTCCAAACGAGGTGACAGATGTTACCATCACCATGATTTCAC
CAGCCACTGACGGTCAATACGAAGGACAATGGAGAGTTGTCACTTTAGCT
GGTGTCCTATGCGGTACAATGCTCAAGGTGCAAGTGAACGTTGATTCATC
GGGAATGAACTCTTTGACAGAACAAATGTCTTCTTTGGGTCAACCACAAC
AATTTTTTGGTGTCACTGGCGGTGCAGCACCCACACAGCCAATGTCGACG
CCTTTACGCCCTGCGGTTAACGCCACTCCTTTTTGTTCGCCAACTGGATA
TGGTTTATTTGGAAGCGGGAATCTCCCAAATAATGGTGGTGTGAATACAG
GTCAGTTGCCAAGGATCAATGAGGGTGCAAATATGAGTATTGACCCACAA
CAAATGAACCAACTATTAAACGATCCATCAATGTACACCAATAACCAGAA
CTTCAATAATGGTCCATTTGATAGTTAACAGTAGTTCTATGACGTCACTC
TTATTattaatgatgacgtcattcccaCGTGTTCCAATAATATAAGTTGT
GTTGTGAATTCACCCGAGAATTCATCAATAAAGATATTAACAGTTTATGC
TAATGCCGATATTTGTTAATCTCCATGAGATTGCGAAGATGCATCATTAG
AAATCTGTTGCTGACCAAGCGCAGTGAGAGAATTCGAACTAATTCATGTT
TAATCTCAAACGGATGGGAAATCACGACATTGTACTGTAGACTACCAAAA
TGTTCGTGTGGATAAATTGACAGAAACATAATGACATGATGTGAAATGAT
AAACTGTTTTTGTAAATtatcttaaaaatatttcttttttatctgataaa
agttttgtaattttgggATGAGATCACCAACCAGCCTATTGATTTTACAC
AAACAGATTTTGGAAAGTTAGAAGGTATATGGGTATTATAAAAGTCGCCT
TTTTGGGGACCTCAAAGTCCCAGATAGGAATGAAGGTCATAAGAATCtgt
aaatcaaattttttttgaattgttattCAAAATTTGTGTTCATTATACTA
AAAAGTTTTATCGAAATATCCCCCCGTATAGTATGGTTTGTAAGAATCAC
AAAACGTTCGTGCTAATATCAGCTTTACAACAATATGATTCGAATTGTTC
AGAATTTATACTATGTAACACTAGGAGGTATCATCCAGTAATTATTAAGT
TTGTAATATTCAAATTTGTTACGTTACGTAAAGAGCTTTAGTATTAAACT
TTAAATGCATATAAATGTACATCCAGTCTTTTAGAATGATATTTCTTTAT
CTTACTTAGTCAAAttgtaatcaatttttttagaatatttctAAGAACAG
AAAAT Run BLAST on NCBI protein sequence of TCONS_00004770-protein >TCONS_00004770-protein ID=TCONS_00004770-protein|Name=TCONS_00004770-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MLLILSRHGKLTALGAYYDVMSSSEDLPLFEVTDESCHIRESSIRPGQSF
IKTWRLRNIGATVWPNNLKLKFTGGTNFGHGECASLPPLSPNEVTDVTIT
MISPATDGQYEGQWRVVTLAGVLCGTMLKVQVNVDSSGMNSLTEQMSSLG
QPQQFFGVTGGAAPTQPMSTPLRPAVNATPFCSPTGYGLFGSGNLPNNGG
VNTGQLPRINEGANMSIDPQQMNQLLNDPSMYTNNQNFNNGPFDS Run BLAST on NCBI transcript from alignment at sc0000048:34942..46356- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004770 ID=TCONS_00004770|Name=TCONS_00004770|organism=Clytia hemisphaerica|type=transcript|length=11415bp|location=Sequence derived from alignment at sc0000048:34942..46356- (Clytia hemisphaerica)
GTTTTACAATATTTTGCAATTTCAAGGGTAAAAACTGCTAAACTTGGAGC
AGTAGTTTGAAAATTAATACTTCATTGGTTAATTTATATTTCTATTTGTA
GGAATGGAAGTCGAATCTGCAGGTGAAAATGCAGATCTGGATAATGAACT
CATGCAAAAACTGAACACCCTTGGAACTCGAGATAAAGAGGACCTTGTAA
ATCAATTTCAAAGCATTGTTGGTGGTCAATTAACAAGAGGATGTTGCTCA
TTTTATCTCGACATGGGAAATTGGTAATAAATTTATATCAACTTGACGAG
GGAGGGGACAGAAGGTGGGAATGGTAAAGGTGACTCTACGGTACAGGCTG
ATTCTCTGTGTGTGACGTCATTTTCACCCACAATCAGCCATTTTACTAAG
ACCAGACGGTGTCAATCGAACAACTTCGAACAAAAATCGCAATCGAACCA
ATCGAACGTAATCGAACGCGATCGAATAATTGCAATTCGATTGTCGAACG
TAATCGAATCTTAATCGAACGGCCGAATCCTGGGTAATATTCGATTGTTT
TCGATTGCGTTCGAGTAAGGTTAGATTGGTTTGATTGATAGTTGACTATA
TTCAATTGGTTCGATTGATTGTCAATTACAAGGTCAATTACATTCGATTT
CGTTCGGTTACGATTATGTTCGATGAGTTTGATTGCGATTAAATTAAATT
GGATTACCCCGTTAGAGCTTTTTATAGCGTGGGCGGCCGAGCGCTTAAGT
CCCGTACGAAAGTGAATAAAATCTAGTACTATTGAATCAGTCGAACATTA
TCGAATACAATCGAACGCAATCGAATACAATCGAACGTAATTGAAGCAAT
CGAACGGCAAGTCCTGGGTAATATTCGATTGCAATTCGATTGCGTTCGTC
AATCGAATTGCAATTATTCGATTGTGTTCAATCGCGTTCAATTGATTCGG
TGTTCGATTCCTTCGATTGACATCGTCTGGCTAAGAGGTGGTAGAAAGAA
CGTGTGAAGGATGATTTATTACCATAAGCTGGTCTAATATTGACATAACT
CATCTGATTCTGACATAACTCATCTGATTCTGACTCCCTTTTTAGATAGA
ATTAAAATAAAACAAGGGCAGCCACAGTCTCAAATAAGATGTGTTTGCGT
CCCTCCGACCAACTCACTTTTTATCTTAAAAATCCGACCCTTTTCTAGTC
AGAAAGTCCGAAATCTTTTCGGGTTTTTTAGCAATATTATTCAAAGAATT
TTGTAGATTCAGTGTTGTAGGGGCCAGCATTTTGATCATTGAGTGTTTTA
AGATTTTTATCCGCAATTTTTCAAAGATTTTTTGCGTTAAAAAGCGCTAT
GCAACTGCTTTTTGCGTGGTTGCAATATGCAAAATAATCACATTACAGCT
CATGATTCTTGTCGCCTGCTCGATGATTTTTGTCACCTGAACAAATCTAT
GCTCAGAGCGCATTTTCCCAATGATTTTAGAGTGGTTTTTACGATGATTT
GAGATGCCGAGTGACCAACTGACTCACATTTTAGGGCTGGAAATGATGCA
AACTTAACTTGTTGGTGACCTAGGCCTAGATCAGAATCACTACTGATTGA
AAAAATATTTATTTCTTACCCGACTGCTAGTTAGCAACCGACAATTCCAA
CCTTCCTATTATTCCCAGCTCTAATAAAGGGTGTCAGAATTAGATAAGGG
ATGTCGGCATTAGACAAACTTTGGTCCCCCAAACTTTTACGGTATTATCT
TGTTCAACTCCAAGAGTGTTTTAGTGTGCATAATGTGTTTCTATTCTGTG
GGTGAAAATTAGGCCACAATATCATAAATAACTTGTGTTTGCGTTCGGTC
GGCAAAAAAAAACACTGAAAAAATAAATTTTCAAACAATGAGTTGGTAGA
AATCAAATCTATTGAAAATTGAAAATAAACAGCCTTATGTCAGATTGCTT
GAGATTTGGTTGAAGATAGTGCCTAATTCTAACTGGATTTTGCCAAATCA
GTCTATATTATGCTAATTTTAAGCTCTCTTCCACATAATTAGAATTGATA
ACTTTTTCCAATCAATTAAGCAATCGATAATCAATTGATGGATCGGAAAT
CAATTGATTCTGATAATAACACCTACACACCCCTTCTCTTAATATTAGGG
AAGTTATACACATGCTCTGGCCAGGTTTTTGGAGGCAAAAATCCAAAAGT
TTTGTGGCTTGAAATTAGCCGGAATGTTTTGCTACTTTTGCCCAAACATG
ACCCTAAAATGTTACCTTGGATTGTACCGTCAACTGCTCTAACTTGGGAC
GATTGGTCGCAATGGGACTGTTGATATCTGGCCTGTATTTTCACTTACTG
TTAAATCTCTACAAAAAATTTGTATTGATAACTCCACAAGTTTATCAATC
ATACGTTCTGTCATAATATATCACGATGACTGGACGCCGATTGGAGAATT
CTAACCGCCTATCGCCCAATGGGATTAACAAAGAAAGAGTATATGTAACT
TGCTGCGCGAGTAACGTCAAACGCTCCTGCCACTAATTTGGTCTTCTTCA
TTCCAGACATTCGCGTGTGTTCCACTACAAATTTCTTTTCATATTTTGAT
TTAAAAGCCTATCGGTGCGAAAGAGAAATTGTGTATTTTTTAATACGCGG
TTCATTAACTCAAATCAAATGACTTCGGAGGTTCGGTGAAATGGTGGCTG
GCAAGTTAGAGCAGCTGACGGTAAGCCTTTGCTATTATAAAAATCAAATG
GCAAATAGATTTTTATTGCCAGGTTTACAGGCTAGAACTTTATTGACTCA
AAGAATGGGATCCTTTTTAAGGACATCACTTTATTACAAAAATAAACTGT
AAATTTCGCTGATATTCAAGCATAACTCTAAAGTTTGTTGTGAATAGTCT
AACTTATAGAACCTCTAACCCAGCTTGATTGAAATTTAATGACTCTATTA
AATTCCATTGGGCTTGATTAGTTCATTAAAAAAAGAAATTTGAACAGTTT
GATTAGGCCTGGATTAATGCTGTTAAAGTCTTTATTATCACTTGAATTTT
AAGCAAGGAATGCACAGTAAAACTTTTGACAGCTTAGAAAAATCATGAAT
CTAATAATTAGAGGAATGTTTATAATTGTTGCGCAACATTGAAACATTGT
AACTTTTTTCTACTGATTTTTTATCGTGCCTGTATACAAAGCAAAAAGTA
AAAACTTTTTTAGTCCACCTTTCCCTGTATTCGACTTTCATTGGAAGAGT
CTGTTGATAAATAGCTGCCTGGACATTTCAATCTTAAGACATCTTTTTAC
TGTTTGTTTTCATTTAATCTCCTTTCTTTTATTTTCAGGAACCTTCAGGT
GAATATTTGGTGCTTCATTTCTTTAAATTTCACTCCAAATCTATGAAAGG
GATTATCAAGATGTAGGGTGTATCGTTTTTCAGTCTAAAGTTCTTGTCTT
GTTTTGACATTGTTTGTTTCTGCAATTTGAAAAAAAATTGAATTGTTATT
CATCCACATTATTTCTTACTTCCAAAGCATGAAATTAGTAACATTAATTT
TCTTTATTGTTAAGACTTCTAAGCAAGTGGTTGTCTTTTTTTGACATGGT
TTAACATGTGTTTTATCAACATTTTTTCAATTTCTAGGCATAGTATAAAA
TTTCTGATATTATTATTCTCCTGTTATTAGACTGCACTTGGAGCCTATTA
TGATGTGATGAGTTCTTCTGAGGATTTGCCTCTCTTTGAAGTGACGGATG
AAAGTTGTCATATTAGAGAAAGCTCTATTCGACCTGGTCAATCATTTATC
AAAACATGGAGATTGCGGAATATAGGTATGGATTAATTATCTGTCTCAGA
AGTGGATTTTGAAAATTTTCAATCTTAGACTCAAAATCACGTTTCACATT
GTTTCACATTAGATGTTAATCATCAATTAATTTGTGTGTAATTTTTTCAA
AGGAATAACTCTTGATTGCATTCAAAAATAGAACCCCAAAAAGTGAGATT
TCCAATCACAGCCACTTTTTAGCCCGCAGCGTTGACATTCTTGTGGCTGC
TGTGTAGTACAAAATTCCATAAAATAAGGAAATTGATGAGTCTTCCAAAA
ATGTGCCTCCCTTTGAAGTTGAGTGATTCAGTCTTGAAATATAAGATGGC
AAAGTGAGGGCAGGTTTTGTGGCTGTATGTCACTGTGGCTCACTCAACGG
GTTGGCTTATATGTGCTGTCCTGCTTTAAGACTGCAATATTTTTTAACCA
TTTTTCTTGAAATTGTTAGTTTAAGGTCTGATAAAGATACTTATGGGTTT
AATTTGTGGCTGCAGGGTTTTCAATGGGCTTAAAATGTGGCTTCAATCAC
TAATTTATCAATTTACACATTCCAGGTTGGGTTTTGTTTTCGAAACATGA
ATATTTGCAAAGACTAATGCAAAACAAACACAATCTGACACAATACAGTG
TTATTTTAAGAAAAAGTGTACATTTTGTGGCTGCAAATACCATTTTTTAC
ATATAACCTTCTGAGCTGTTACATATAAGTATTAGTTGGTATTTTTAGGG
TTGGCTTATGTGCTGTCCTGCTTTAAGACTTCAATATTATTTAATCATTT
TTCTTGAAATTGTTAGTTTAAGGTCTTATAAAGATACTTATGGGTTTAAT
TTGTGGCTGCAGGGTTTTCAATGGGCTTAAAATGTTGCTTCAATCAAAGC
ATATTTGAAAAAAATCGTCAACTTTGAGCCGCAATTCTAGCCCAATGATC
CAATAATTTTGGTTCCATTTTTTATATTTTGTGGATAAACCCTTTGGCTA
CGAGTTCCATCTAAAAAAAAATGATTTTTACTCATTGAACAAATTTGTTG
CTGTTTTATCAACATAGTGTTTTTCTTGATTTGCGCCGCAATTTTGGCCC
ATTTTACAAAAAAAAAATTATTACTTATATCACCTTTAGAACCAATATTT
TGAAGTTTCGTTTGAAAAGAGTTATTTTTAAAAAGGATATTCAAATTTCT
TTTTTTTTTGCTGTTTTTGAAAACCTTACACAATTTTTGAATGCCATCTC
TTGGCTAAAATTTCAATCTTTTATGGTAATCACTATTAAAACCATTCTGT
GTATATCGGGACCATCTCCATGTACTATTACACCCTTGTCTCGATATAAT
TGAAATTATCAGGTGGCGAATATTAGGATCTACCGGGTGCGCCACAAAAA
AGTTTCTCTCTTTAAAAGTAATTTTTTTCGAAATCTAAAAATTTTAAAAG
AACCATTCCTATTTTATTGGAAAGAAGAAAAATAAACTTAAATTTTGATG
GGTCATTTATTGAATTCGATTCATTACAGTATATGGCCCCCAAAACGGAG
ACGGCCCCCAAAACGGAGGTTTTCATAAAAATGAAGATTCTGACTTGTAG
ATTTATCAGAATAAACGATATTTGTTTATTTTGAAAGAATGATGGTTATA
CTTAAAAATGAGCATGTTTTTGATGGTTTGAGACAGATTCAAAATCACAT
ATTTGCGTCTAAAGGAAATATTTTAACACCAAAATTAGATAAAAATTGCA
TATAACTCACTCTAGCTCCTTGGATACTGAAAATAAGTTATGAAAACGGG
GTATATGAAACTTTCTACACCTAATACCGTTCAGAAAATGCAAATACATC
TGTGACTTTAGAGGCTGGGTAAAAGATATAGCATCTTGAAGGTTGACCAG
TATTTTGGAGCCCTAAATTTAGCATTGACAAAACCGAAATTCTAATTATG
AGAAAAAGCAAAAAATCTTGGAATTCTATTCCTATCACCTTGAGTTAATA
GTTTATAACAAAAAATTAACATGATATATAAAATTTTTCGCTGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTTAAATGA
CCTTTTGTTATTTAAAGGAAGGTTGAATTTCAATGAAAGGAAGAAAATTC
GTCGAAAAAGGCCAAAAAATCTGGTAGAATTCATAAAAAAACATCAAATA
TGGGTTTCGAAGTAGATTCAGCCTTACATAGACAATCCAGTCTAGAACCA
AAAATCTGAGGAAAATTTTGGTAAAACTAAATCAAATTAATTTTGATGAA
GATTTTGAACCCTTTCGACCCTTCAGTTTCAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTATTCAATTGGACATAACTT
TTGATCTAATGAATCAAATTTAATAAATGACCCATCAAAATTTAAGTCTA
TCTTTCTTCTTTCCAATGAAATAAGATTGGTTCTTTTAAAATTTTTAGAT
TTCGAGAAAATTAGTTTCAAAGAGAGAAACTTTTTTGTGGCGCACCCGGT
AGTTAAAAAATTTCGGTGGGGATTCCAAATCTATGATTTAAAGCTCGAAA
ATCCAGGGGAATAGGGATTCTCCAAGTTATTGTGTTTTTACCCTAGTGCC
TTGAAAGTTTAGTTTAATTGTTAGTGAAAACCATCACCGGGGTAGGGATA
AATTTTTGTAACCAGCACGTTTTTGGACAGGATGGGCTGTTTAAATAAAT
AAATTTATTTATTTATAGGTGCTACAGTTTGGCCTAATAATCTAAAATTG
AAATTCACGGGTGGTACGAATTTCGGTCATGGAGAATGTGCATCCTTGCC
ACCATTAAGTCCAAACGAGGTGACAGATGTTACCATCACCATGATTTCAC
CAGCCACTGACGGTCAATACGAAGGACAATGGAGAGTTGTCACTTTAGCT
GGTGTCCTATGCGGTAGTAAGTATTTATCTTCGCTACAATAGTAATGCAA
GGGGAAAAGGCAATTGGTTCAGGTTATGGAGACTTTCAAGTTGCAGTGGT
TTTCAAGATTTATTTTATCTCTCAGAATATCAGAATCTTCCCATTATTTG
AAAACCAACTGAATCAAGAAAAGTAAATTCAATTTCGAGTCTTGTAAACT
CTTCCTTTTAATTTCTTTACTTTTCTTGGGTCGGTGATGTAAAAAACAAT
TCCATCTTGTTTGTTTTTTAATAACAAAATATATAAAAAGAGAAAACTAA
TCGAATGTTTATAGAGAGTTTGATATGTAGAGACGCAAAAAACCTTAAAG
GTTTTATTTTTACATAAGTGGTCCCGTTTCATATCGGACACATATTTCAT
ATCAGAACATGTCTGCCTTTGTTATATTATGCTGATATAAACAAAAAAAT
GTTTTTCTTTTCCTCTTTTTGACCAATCTTGCTCCACATCCGTGTCAATC
CAATGTGAGAAAGCTTGTAAATTAAAATTGATGTTTATTCTCGGGACAAA
CTGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAA
TAAAAGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTT
AAATGACCAATTGGTGAAGTATCTTGTAAAAACTCCAAGGCATCTCCAGA
AATGAAGGAATGCTGCCTCGCCTAAATAAATTCACATTCGATTCATGGAG
GTCCGAGTTAAGGTCTATGAGGTTTTTTATCATGTATTCAAATTGCTAGC
GATCTTCTTCAATTCAAATTTAAAATTGTAAAGAGCTTTTACCTGCAACC
GTATTGTACACTGTCCGACCCCGTCACTTTCTCCGCATCATAACCTTGTA
CCGTATGTGTAGCAATTTTGACGTGTACACTCAATTAGGCGGTTGGTCAA
AATTCGATTTTTAGTGGGTATTTAATTTGAATTTTTCTCGAGTTCTATGA
ACTGTTAAATAATCAATGCATTTGCATTGGAAAGAGGAAGTATAAACTTA
AATTTTGAGGGGTCTTTTGTCAAATTTAGTCAACTAGATGCCTAAATGCT
AAAACATTACTCTTAAAAAGACTAAAAAGGGTGAAAAACGAGGGTATTAT
TATCTTTCCTCTTTCCAATGCAAAAGGAATGATTCTTTAAAAGTTCATAA
AACTCGCAAAAATTCACTTCAAAGAGGGGGACCTTTTTCTGGGACACCCG
GTAGTTTAAACTGAAAAATGCTGATTTTAGAAAAGATAGGATAGGATTTT
ACCAAAAATTCGCCATTAAGTAATACACTTTAGGTAAAAATATTTGGTGA
ACTTCAATTTTTTGTGATCTTCAATTTTTCAGCAATGCTCAAGGTGCAAG
TGAACGTTGATTCATCGGGAATGAACTCTTTGACAGAACAAATGTCTTCT
TTGGGTCAACCACAACAATTTTTTGGTGTCACTGGCGGTGCAGCACCCAC
ACAGCCAATGTCGACGCCTTTACGCCCTGCGGTTAACGCCACTCCTTTTT
GTTCGCCAACTGGATATGGTTTATTTGGAAGCGGGAATGTGAGTTCTTTT
TTGAAACATCATTTGTAGTTATTAATGTATCCTTATAATGTGTAAGGGAC
CCAACTTTTCGTGAAAAAATTTATAGGGGGTAAGACTTTTTCCGATTAAA
ACGGGGATTTTGAGCTTTAAGGGGGGTAAATGACAATAGGTATGGTGTTG
TTGCTGATTTTGATTGTTTCAATTGTTTTACAAGTTTGTTTTGGACACGT
GATTTTAATTTTTCTCTTAATGACACGTGGTTTGCGCAATGTTGTCAATC
TATGCATTATATCTCATATTGGTTGAAGAATTTGGTAATGGTTTATCAAA
ATTACAATATAATAAATAGCAAAACCTTTGCCTGCGGTGCAATTTCCACC
CAGAAACAAAAGAATTGTGAATTTTTTTGCGTATTTATAACGTTTGGTAT
AAACCTGAACTGTTAATAATGGATGCAGTGTGGCATGGGAGTTCAGTACC
CGCTGCACGCTAATGATAGGTTCCATAGGAGAAAGGGGTTACTTCTAGTT
GTCAAGAAGTTTTTCCATACAAAAAAATCTGAACTCGAAAAATATATCCC
ATATTTTACTCGGTACCATGCGATCACTATTACTTATTTTGAATAAATTT
CAGCATATTTTTCAAGTAATGAATTTTTTTTAACCTTATAAACCCAGTAT
CGTAGACAGAAGGGGCGTATAAAAAGATATTTACTTTGTCATGAAAATAT
GCTCTTCTACACAAATTTTGCACCCCTCCTGTCCTCATTATGTCCAAGTG
ACCCCTTTTATTTGAAATTTTCACAAGCCCCCTTCTTTTAAATTCATTAA
AATTCTCAAACCACCCCCCCCCCCTTTTTCAAGGGGGGTGCCCACCACTG
CAGTACTCGGTTTGGGTCGATTTGTAACCAAATTCTTTTTTTGCAGTCAC
TTTATAGTTTATTGCATTTTTGTTTTATTCTTTATTTTAGTCAATAATAA
ATCAATATAATTTTTTCATCAAATATTTTTTTGCAAAAATTTGTAACCAA
AATGCAACGAGATTCTCCGTTTAAAAAAAATTGTTGACCCGCATCCAGTG
GTAACATTAGGATTCCATTTAAAAAAGATAATGTTTTGTGAGGACCCAGG
GCTTACAAGGTGACAGTGACGTCACGGTCAAAATTCAAATTAAATGGAAA
TTTGGTCCACTTATTTTATTGGAACTATTTCTTATATTTCCTGAATTAAA
TGAATAACATTANGTCCTCTTATTTTATTGGAACTATTTCTTATATTTCC
TGAATTCAATGAATAACATTATCTTCTTTTAGCTCCCAAATAATGGTGGT
GTGAATACAGGTCAGTTGCCAAGGATCAATGAGGGTGCAAATATGAGTAT
TGACCCACAACAAATGAACCAACTATTAAACGATCCATCAATGTACACCA
ATAACCAGAACTTCAATAATGGTCCATTTGATAGTTAACAGTAGTTCTAT
GACGTCACTCTTATTATTAATGATGACGTCATTCCCACGTGTTCCAATAA
TATAAGTTGTGTTGTGAATTCACCCGAGAATTCATCAATAAAGATATTAA
CAGTTTATGCTAATGCCGATATTTGTTAATCTCCATGAGATTGCGAAGAT
GCATCATTAGAAATCTGTTGCTGACCAAGCGCAGTGAGAGAATTCGAACT
AATTCATGTTTAATCTCAAACGGATGGGAAATCACGACATTGTACTGTAG
ACTACCAAAATGTTCGTGTGGATAAATTGACAGAAACATAATGACATGAT
GTGAAATGATAAACTGTTTTTGTAAATTATCTTAAAAATATTTCTTTTTT
ATCTGATAAAAGTTTTGTAATTTTGGGATGAGATCACCAACCAGCCTATT
GATTTTACACAAACAGATTTTGGAAAGTTAGAAGGTATATGGGTATTATA
AAAGTCGCCTTTTTGGGGACCTCAAAGTCCCAGATAGGAATGAAGGTCAT
AAGAATCTGTAAATCAAATTTTTTTTGAATTGTTATTCAAAATTTGTGTT
CATTATACTAAAAAGTTTTATCGAAATATCCCCCCGTATAGTATGGTTTG
TAAGAATCACAAAACGTTCGTGCTAATATCAGCTTTACAACAATATGATT
CGAATTGTTCAGAATTTATACTATGTAACACTAGGAGGTATCATCCAGTA
ATTATTAAGTTTGTAATATTCAAATTTGTTACGTTACGTAAAGAGCTTTA
GTATTAAACTTTAAATGCATATAAATGTACATCCAGTCTTTTAGAATGAT
ATTTCTTTATCTTACTTAGTCAAATTGTAATCAATTTTTTTAGAATATTT
CTAAGAACAGAAAAT Coding sequence (CDS) from alignment at sc0000048:34942..46356- >TCONS_00004770 ID=TCONS_00004770|Name=TCONS_00004770|organism=Clytia hemisphaerica|type=CDS|length=3690bp|location=Sequence derived from alignment at sc0000048:34942..46356- (Clytia hemisphaerica)
CTCCCAAATAATGGTGGTGTGAATACAGGTCAGTTGCCAAGGATCAATGA
GGGTGCAAATATGAGTATTGACCCACAACAAATGAACCAACTATTAAACG
ATCCATCAATGTACACCAATAACCAGAACTTCAATAATGGTCCATTTGAT
AGTTAACAATGCTCAAGGTGCAAGTGAACGTTGATTCATCGGGAATGAAC
TCTTTGACAGAACAAATGTCTTCTTTGGGTCAACCACAACAATTTTTTGG
TGTCACTGGCGGTGCAGCACCCACACAGCCAATGTCGACGCCTTTACGCC
CTGCGGTTAACGCCACTCCTTTTTGTTCGCCAACTGGATATGGTTTATTT
GGAAGCGGGAATGTGCTACAGTTTGGCCTAATAATCTAAAATTGAAATTC
ACGGGTGGTACGAATTTCGGTCATGGAGAATGTGCATCCTTGCCACCATT
AAGTCCAAACGAGGTGACAGATGTTACCATCACCATGATTTCACCAGCCA
CTGACGGTCAATACGAAGGACAATGGAGAGTTGTCACTTTAGCTGGTGTC
CTATGCGGTAACTGCACTTGGAGCCTATTATGATGTGATGAGTTCTTCTG
AGGATTTGCCTCTCTTTGAAGTGACGGATGAAAGTTGTCATATTAGAGAA
AGCTCTATTCGACCTGGTCAATCATTTATCAAAACATGGAGATTGCGGAA
TATAGATGTTGCTCATTTTATCTCGACATGGGAAATTGCTCCCAAATAAT
GGTGGTGTGAATACAGGTCAGTTGCCAAGGATCAATGAGGGTGCAAATAT
GAGTATTGACCCACAACAAATGAACCAACTATTAAACGATCCATCAATGT
ACACCAATAACCAGAACTTCAATAATGGTCCATTTGATAGTTAACAATGC
TCAAGGTGCAAGTGAACGTTGATTCATCGGGAATGAACTCTTTGACAGAA
CAAATGTCTTCTTTGGGTCAACCACAACAATTTTTTGGTGTCACTGGCGG
TGCAGCACCCACACAGCCAATGTCGACGCCTTTACGCCCTGCGGTTAACG
CCACTCCTTTTTGTTCGCCAACTGGATATGGTTTATTTGGAAGCGGGAAT
GTGCTACAGTTTGGCCTAATAATCTAAAATTGAAATTCACGGGTGGTACG
AATTTCGGTCATGGAGAATGTGCATCCTTGCCACCATTAAGTCCAAACGA
GGTGACAGATGTTACCATCACCATGATTTCACCAGCCACTGACGGTCAAT
ACGAAGGACAATGGAGAGTTGTCACTTTAGCTGGTGTCCTATGCGGTAAC
TGCACTTGGAGCCTATTATGATGTGATGAGTTCTTCTGAGGATTTGCCTC
TCTTTGAAGTGACGGATGAAAGTTGTCATATTAGAGAAAGCTCTATTCGA
CCTGGTCAATCATTTATCAAAACATGGAGATTGCGGAATATAGATGTTGC
TCATTTTATCTCGACATGGGAAATTGCTCCCAAATAATGGTGGTGTGAAT
ACAGGTCAGTTGCCAAGGATCAATGAGGGTGCAAATATGAGTATTGACCC
ACAACAAATGAACCAACTATTAAACGATCCATCAATGTACACCAATAACC
AGAACTTCAATAATGGTCCATTTGATAGTTAACAATGCTCAAGGTGCAAG
TGAACGTTGATTCATCGGGAATGAACTCTTTGACAGAACAAATGTCTTCT
TTGGGTCAACCACAACAATTTTTTGGTGTCACTGGCGGTGCAGCACCCAC
ACAGCCAATGTCGACGCCTTTACGCCCTGCGGTTAACGCCACTCCTTTTT
GTTCGCCAACTGGATATGGTTTATTTGGAAGCGGGAATGTGCTACAGTTT
GGCCTAATAATCTAAAATTGAAATTCACGGGTGGTACGAATTTCGGTCAT
GGAGAATGTGCATCCTTGCCACCATTAAGTCCAAACGAGGTGACAGATGT
TACCATCACCATGATTTCACCAGCCACTGACGGTCAATACGAAGGACAAT
GGAGAGTTGTCACTTTAGCTGGTGTCCTATGCGGTAACTGCACTTGGAGC
CTATTATGATGTGATGAGTTCTTCTGAGGATTTGCCTCTCTTTGAAGTGA
CGGATGAAAGTTGTCATATTAGAGAAAGCTCTATTCGACCTGGTCAATCA
TTTATCAAAACATGGAGATTGCGGAATATAGATGTTGCTCATTTTATCTC
GACATGGGAAATTGCTCCCAAATAATGGTGGTGTGAATACAGGTCAGTTG
CCAAGGATCAATGAGGGTGCAAATATGAGTATTGACCCACAACAAATGAA
CCAACTATTAAACGATCCATCAATGTACACCAATAACCAGAACTTCAATA
ATGGTCCATTTGATAGTTAACAATGCTCAAGGTGCAAGTGAACGTTGATT
CATCGGGAATGAACTCTTTGACAGAACAAATGTCTTCTTTGGGTCAACCA
CAACAATTTTTTGGTGTCACTGGCGGTGCAGCACCCACACAGCCAATGTC
GACGCCTTTACGCCCTGCGGTTAACGCCACTCCTTTTTGTTCGCCAACTG
GATATGGTTTATTTGGAAGCGGGAATGTGCTACAGTTTGGCCTAATAATC
TAAAATTGAAATTCACGGGTGGTACGAATTTCGGTCATGGAGAATGTGCA
TCCTTGCCACCATTAAGTCCAAACGAGGTGACAGATGTTACCATCACCAT
GATTTCACCAGCCACTGACGGTCAATACGAAGGACAATGGAGAGTTGTCA
CTTTAGCTGGTGTCCTATGCGGTAACTGCACTTGGAGCCTATTATGATGT
GATGAGTTCTTCTGAGGATTTGCCTCTCTTTGAAGTGACGGATGAAAGTT
GTCATATTAGAGAAAGCTCTATTCGACCTGGTCAATCATTTATCAAAACA
TGGAGATTGCGGAATATAGATGTTGCTCATTTTATCTCGACATGGGAAAT
TGCTCCCAAATAATGGTGGTGTGAATACAGGTCAGTTGCCAAGGATCAAT
GAGGGTGCAAATATGAGTATTGACCCACAACAAATGAACCAACTATTAAA
CGATCCATCAATGTACACCAATAACCAGAACTTCAATAATGGTCCATTTG
ATAGTTAACAATGCTCAAGGTGCAAGTGAACGTTGATTCATCGGGAATGA
ACTCTTTGACAGAACAAATGTCTTCTTTGGGTCAACCACAACAATTTTTT
GGTGTCACTGGCGGTGCAGCACCCACACAGCCAATGTCGACGCCTTTACG
CCCTGCGGTTAACGCCACTCCTTTTTGTTCGCCAACTGGATATGGTTTAT
TTGGAAGCGGGAATGTGCTACAGTTTGGCCTAATAATCTAAAATTGAAAT
TCACGGGTGGTACGAATTTCGGTCATGGAGAATGTGCATCCTTGCCACCA
TTAAGTCCAAACGAGGTGACAGATGTTACCATCACCATGATTTCACCAGC
CACTGACGGTCAATACGAAGGACAATGGAGAGTTGTCACTTTAGCTGGTG
TCCTATGCGGTAACTGCACTTGGAGCCTATTATGATGTGATGAGTTCTTC
TGAGGATTTGCCTCTCTTTGAAGTGACGGATGAAAGTTGTCATATTAGAG
AAAGCTCTATTCGACCTGGTCAATCATTTATCAAAACATGGAGATTGCGG
AATATAGATGTTGCTCATTTTATCTCGACATGGGAAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004770-exon-sc0000048-1575043694:46084..46356 | TCONS_00004770-exon-sc0000048-1575043694:46084..46356 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1575043694:42532..42676 | TCONS_00004770-exon-sc0000048-1575043694:42532..42676 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1575043694:38841..39038 | TCONS_00004770-exon-sc0000048-1575043694:38841..39038 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1575043694:37269..37474 | TCONS_00004770-exon-sc0000048-1575043694:37269..37474 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1575043694:34942..35974 | TCONS_00004770-exon-sc0000048-1575043694:34942..35974 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1510915933:46084..46356 | TCONS_00004770-exon-sc0000048-1510915933:46084..46356 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1510915933:42532..42676 | TCONS_00004770-exon-sc0000048-1510915933:42532..42676 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1510915933:38841..39038 | TCONS_00004770-exon-sc0000048-1510915933:38841..39038 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1510915933:37269..37474 | TCONS_00004770-exon-sc0000048-1510915933:37269..37474 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1510915933:34942..35974 | TCONS_00004770-exon-sc0000048-1510915933:34942..35974 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1491911889:46084..46356 | TCONS_00004770-exon-sc0000048-1491911889:46084..46356 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1491911889:42532..42676 | TCONS_00004770-exon-sc0000048-1491911889:42532..42676 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1491911889:38841..39038 | TCONS_00004770-exon-sc0000048-1491911889:38841..39038 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1491911889:37269..37474 | TCONS_00004770-exon-sc0000048-1491911889:37269..37474 | Clytia hemisphaerica | exon |
| TCONS_00004770-exon-sc0000048-1491911889:34942..35974 | TCONS_00004770-exon-sc0000048-1491911889:34942..35974 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048 | supercontig | sc0000048:34942..46356 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00004770 vs. Swiss-Prot (Human)
Match: CF106 (Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 2.875e-26 Identity = 65/201 (32.34%), Postives = 97/201 (48.26%), Query Frame = 1
Query: 241 MLLILSRHGKLTALGAYYDVMSSSEDLPLFEVTDESCHIRESSIRPGQSFIKTWRLRNIGATVWPNNLKLKFTGGTNFGHGECASLPPLSPNEVTDVTITMISPATDGQYEGQWRVVTLAGVLCGTMLKVQVNVDSSGMNSLTEQMSSLGQPQQFFGVTGGAAPTQPMSTPLRPAV-NATPFCSPTGYGLFGSGNLPNNGG 840
L ++ A+GAYYD S + +P ++ SI P F+KTWR++N GA WP + LK+ GG FGH + L P E+ DV++ M SP+ G Y+GQWR+ T G+ G ++ V ++V+ G+ +T+Q+SS T+ + P R N PF SP NL + GG
Sbjct: 46 FFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNSGAEAWPPGVCLKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSF--------------ETEFNTQPHRKVEGNFNPFASPQKNRQSDENNLKDPGG 232
The following BLAST results are available for this feature:
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